AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049488


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049488.t1 MTR_3g466200 96.000 250 10 0 5 254 71 320 7.72e-180 496
MS.gene049488.t1 MTR_5g074970 74.104 251 64 1 5 254 76 326 1.14e-135 385
MS.gene049488.t1 MTR_5g083860 72.400 250 68 1 5 254 77 325 5.24e-131 373
MS.gene049488.t1 MTR_3g094650 68.800 250 77 1 5 254 74 322 1.95e-122 351
MS.gene049488.t1 MTR_3g094670 70.000 250 74 1 5 254 74 322 1.70e-121 349
MS.gene049488.t1 MTR_3g094630 69.200 250 76 1 5 254 74 322 5.19e-117 338
MS.gene049488.t1 MTR_2g084090 60.800 250 96 2 5 254 71 318 2.31e-107 313
MS.gene049488.t1 MTR_3g072190 62.800 250 90 2 5 254 5 251 3.83e-107 310
MS.gene049488.t1 MTR_3g072190 62.800 250 90 2 5 254 72 318 1.51e-106 311
MS.gene049488.t1 MTR_2g084080 59.200 250 99 2 5 254 71 317 1.65e-106 311
MS.gene049488.t1 MTR_4g029200 58.400 250 101 2 5 254 92 338 5.54e-106 310
MS.gene049488.t1 MTR_2g084110 58.800 250 100 2 5 254 71 317 1.88e-104 305
MS.gene049488.t1 MTR_2g084020 59.363 251 98 4 5 254 71 318 5.53e-103 302
MS.gene049488.t1 MTR_4g029190 57.200 250 106 1 5 254 92 340 3.97e-102 300
MS.gene049488.t1 MTR_7g072510 57.200 250 104 2 5 254 66 312 6.59e-102 299
MS.gene049488.t1 MTR_4g083710 60.079 253 97 4 5 254 73 324 4.85e-101 297
MS.gene049488.t1 MTR_5g074860 59.921 252 92 6 5 251 75 322 3.03e-100 295
MS.gene049488.t1 MTR_7g072480 58.400 250 101 2 5 254 70 316 8.84e-100 294
MS.gene049488.t1 MTR_2g084010 57.371 251 103 3 5 254 71 318 1.63e-99 293
MS.gene049488.t1 MTR_4g074995 59.684 253 85 4 5 254 70 308 2.84e-98 290
MS.gene049488.t1 MTR_4g029170 58.964 251 100 2 5 254 73 321 7.98e-98 289
MS.gene049488.t1 MTR_4g029180 58.566 251 101 2 5 254 73 321 4.00e-96 285
MS.gene049488.t1 MTR_2g084000 55.777 251 107 4 5 254 72 319 6.26e-96 284
MS.gene049488.t1 MTR_7g026990 54.800 250 109 3 5 254 77 322 6.48e-94 279
MS.gene049488.t1 MTR_3g466180 59.200 250 99 2 5 254 77 323 3.98e-92 275
MS.gene049488.t1 MTR_5g074740 57.255 255 100 7 5 254 71 321 1.75e-91 273
MS.gene049488.t1 MTR_5g074760 56.863 255 101 7 5 254 71 321 3.44e-91 272
MS.gene049488.t1 MTR_4g074990 55.952 252 93 4 5 254 70 305 1.14e-89 268
MS.gene049488.t1 MTR_5g074710 56.078 255 103 7 5 254 71 321 2.02e-89 268
MS.gene049488.t1 MTR_3g467600 53.725 255 110 6 5 254 73 324 4.74e-88 264
MS.gene049488.t1 MTR_1g115900 52.964 253 112 4 5 254 73 321 3.26e-87 262
MS.gene049488.t1 MTR_8g076820 50.000 258 118 4 5 254 76 330 6.97e-83 251
MS.gene049488.t1 MTR_5g021060 47.674 258 124 4 5 254 76 330 2.50e-80 244
MS.gene049488.t1 MTR_2g040000 51.711 263 108 6 5 254 75 331 6.00e-80 244
MS.gene049488.t1 MTR_1g022970 49.421 259 119 4 5 254 92 347 3.54e-79 242
MS.gene049488.t1 MTR_7g093370 49.231 260 119 6 5 254 115 371 5.80e-79 243
MS.gene049488.t1 MTR_5g014100 48.679 265 120 4 3 254 70 331 1.35e-78 240
MS.gene049488.t1 MTR_1g054205 49.231 260 119 6 5 254 70 326 1.10e-77 238
MS.gene049488.t1 MTR_5g017850 47.860 257 124 3 5 254 73 326 4.53e-77 236
MS.gene049488.t1 MTR_4g122640 48.425 254 126 3 5 254 84 336 5.14e-77 236
MS.gene049488.t1 MTR_4g074980 50.199 251 97 4 5 254 71 294 8.70e-77 234
MS.gene049488.t1 MTR_2g029830 47.104 259 125 4 5 254 6 261 1.13e-76 234
MS.gene049488.t1 MTR_2g029860 48.263 259 122 4 5 254 75 330 2.33e-76 235
MS.gene049488.t1 MTR_5g049280 47.348 264 120 6 5 254 79 337 3.13e-76 234
MS.gene049488.t1 MTR_5g017860 47.082 257 126 3 5 254 73 326 4.48e-76 234
MS.gene049488.t1 MTR_2g029830 46.923 260 126 4 4 254 73 329 5.10e-76 234
MS.gene049488.t1 MTR_2g028980 49.807 259 118 5 5 254 75 330 6.41e-76 234
MS.gene049488.t1 MTR_2g029800 48.846 260 121 4 4 254 74 330 2.47e-75 233
MS.gene049488.t1 MTR_4g125940 49.042 261 117 6 5 254 19 274 3.77e-75 229
MS.gene049488.t1 MTR_2g029750 48.649 259 121 5 5 254 75 330 8.38e-75 231
MS.gene049488.t1 MTR_4g125940 49.042 261 117 6 5 254 74 329 2.15e-74 229
MS.gene049488.t1 MTR_4g031140 46.304 257 125 5 5 254 74 324 1.99e-73 228
MS.gene049488.t1 MTR_2g029850 48.263 259 122 4 5 254 75 330 6.56e-73 226
MS.gene049488.t1 MTR_2g029730 45.946 259 128 4 5 254 71 326 1.17e-72 226
MS.gene049488.t1 MTR_2g029815 46.718 259 126 4 5 254 75 330 1.74e-72 225
MS.gene049488.t1 MTR_2g029820 46.718 259 126 4 5 254 75 330 6.79e-72 224
MS.gene049488.t1 MTR_4g074980 60.326 184 70 3 5 186 71 253 9.36e-72 220
MS.gene049488.t1 MTR_5g074860 50.000 252 78 8 5 251 75 283 1.00e-71 221
MS.gene049488.t1 MTR_2g029560 44.788 259 131 5 5 254 70 325 1.43e-71 223
MS.gene049488.t1 MTR_4g030890 45.136 257 128 5 5 254 146 396 1.58e-70 222
MS.gene049488.t1 MTR_2g029740 46.332 259 127 5 5 254 75 330 2.26e-70 220
MS.gene049488.t1 MTR_2g029910 44.402 259 133 4 5 254 76 332 3.87e-67 212
MS.gene049488.t1 MTR_0155s0040 43.825 251 132 5 5 254 73 315 2.10e-65 206
MS.gene049488.t1 MTR_1g077000 45.020 251 129 5 5 254 85 327 6.58e-65 205
MS.gene049488.t1 MTR_2g088770 45.174 259 128 7 5 254 72 325 6.90e-65 205
MS.gene049488.t1 MTR_5g074700 50.885 226 92 8 32 254 5 214 1.54e-64 201
MS.gene049488.t1 MTR_3g072210 55.319 188 79 4 69 254 54 238 1.47e-62 196
MS.gene049488.t1 MTR_1g101830 40.467 257 139 5 5 254 73 322 3.86e-62 198
MS.gene049488.t1 MTR_4g046713 42.471 259 135 6 5 254 73 326 2.61e-60 193
MS.gene049488.t1 MTR_3g092990 40.927 259 142 4 4 254 60 315 1.27e-59 191
MS.gene049488.t1 MTR_1g086320 40.927 259 143 4 5 254 76 333 3.17e-59 191
MS.gene049488.t1 MTR_3g092990 41.085 258 141 4 5 254 72 326 3.20e-59 191
MS.gene049488.t1 MTR_6g043280 45.455 253 128 6 5 254 87 332 2.66e-58 188
MS.gene049488.t1 MTR_5g022870 40.467 257 137 7 5 254 69 316 1.64e-57 186
MS.gene049488.t1 MTR_7g029030 40.769 260 134 6 5 254 71 320 2.88e-57 185
MS.gene049488.t1 MTR_7g072490 42.623 244 83 2 4 247 1 187 3.51e-57 181
MS.gene049488.t1 MTR_4g133800 39.535 258 137 6 5 254 87 333 4.08e-57 185
MS.gene049488.t1 MTR_2g008710 41.379 261 134 6 5 254 73 325 1.19e-56 184
MS.gene049488.t1 MTR_1g025980 41.107 253 134 6 5 250 70 314 1.30e-56 184
MS.gene049488.t1 MTR_8g075100 40.078 257 138 7 5 254 72 319 5.53e-56 182
MS.gene049488.t1 MTR_1g086490 40.075 267 141 6 5 254 76 340 3.85e-55 181
MS.gene049488.t1 MTR_2g437770 39.147 258 137 6 5 254 96 341 6.55e-55 180
MS.gene049488.t1 MTR_2g008730 41.633 245 127 5 21 254 62 301 5.91e-54 176
MS.gene049488.t1 MTR_7g086870 40.079 252 141 5 5 254 68 311 3.40e-53 174
MS.gene049488.t1 MTR_4g114210 41.221 262 134 7 5 254 67 320 7.26e-53 174
MS.gene049488.t1 MTR_1g066710 36.508 252 155 4 6 254 74 323 1.19e-51 171
MS.gene049488.t1 MTR_7g086820 38.431 255 144 4 5 254 66 312 1.82e-51 170
MS.gene049488.t1 MTR_1g038680 38.846 260 147 5 5 254 75 332 2.11e-51 171
MS.gene049488.t1 MTR_1g066380 35.409 257 161 4 1 254 1 255 2.93e-51 168
MS.gene049488.t1 MTR_1g090760 36.923 260 151 5 5 254 74 330 2.81e-50 167
MS.gene049488.t1 MTR_1g066380 35.714 252 157 4 6 254 74 323 3.26e-50 167
MS.gene049488.t1 MTR_4g132490 35.294 255 158 3 5 254 75 327 5.21e-50 167
MS.gene049488.t1 MTR_6g027440 38.095 252 150 4 5 254 67 314 2.01e-49 165
MS.gene049488.t1 MTR_1g066640 36.111 252 156 4 6 254 74 323 2.84e-49 165
MS.gene049488.t1 MTR_1g066680 34.783 253 160 4 5 254 72 322 2.95e-49 165
MS.gene049488.t1 MTR_2g077990 36.014 286 144 7 5 253 122 405 3.49e-49 167
MS.gene049488.t1 MTR_4g087965 41.085 258 137 7 5 250 88 342 4.37e-49 165
MS.gene049488.t1 MTR_4g127670 39.922 258 135 7 5 250 70 319 1.10e-48 163
MS.gene049488.t1 MTR_6g043460 39.526 253 144 5 5 254 82 328 1.13e-48 164
MS.gene049488.t1 MTR_8g062780 37.984 258 150 4 5 254 69 324 2.30e-48 162
MS.gene049488.t1 MTR_2g067440 34.875 281 145 7 5 250 106 383 2.68e-48 164
MS.gene049488.t1 MTR_5g016010 37.597 258 144 7 5 250 73 325 3.99e-48 162
MS.gene049488.t1 MTR_6g043240 39.130 253 142 6 5 254 88 331 7.20e-48 162
MS.gene049488.t1 MTR_0286s0010 35.798 257 155 5 5 254 81 334 2.70e-47 160
MS.gene049488.t1 MTR_6g008075 35.798 257 155 5 5 254 81 334 2.70e-47 160
MS.gene049488.t1 MTR_2g078610 34.965 286 147 7 5 253 122 405 3.47e-47 162
MS.gene049488.t1 MTR_1g009750 38.168 262 144 8 5 254 73 328 7.88e-47 159
MS.gene049488.t1 MTR_2g099175 33.077 260 158 4 5 254 82 335 1.93e-45 155
MS.gene049488.t1 MTR_7g107520 36.434 258 148 7 5 254 71 320 6.75e-45 153
MS.gene049488.t1 MTR_0147s0010 33.735 249 138 4 27 250 132 378 2.00e-44 154
MS.gene049488.t1 MTR_2g008160 37.405 262 144 7 5 254 70 323 3.60e-44 152
MS.gene049488.t1 MTR_4g132110 34.677 248 157 4 6 250 79 324 6.84e-44 151
MS.gene049488.t1 MTR_4g095450 35.938 256 152 7 5 253 73 323 7.66e-44 150
MS.gene049488.t1 MTR_3g105790 34.749 259 153 4 5 254 71 322 3.34e-43 149
MS.gene049488.t1 MTR_2g078280 34.432 273 140 7 5 240 122 392 6.76e-43 150
MS.gene049488.t1 MTR_2g067450 37.358 265 133 11 5 250 56 306 2.07e-42 147
MS.gene049488.t1 MTR_5g033470 34.615 260 159 5 5 254 119 377 3.47e-42 148
MS.gene049488.t1 MTR_4g132110 33.992 253 157 5 6 250 79 329 1.06e-41 145
MS.gene049488.t1 MTR_3g105790 35.714 238 141 3 26 254 12 246 1.76e-41 142
MS.gene049488.t1 MTR_2g029880 39.378 193 95 4 71 254 9 188 4.97e-38 132
MS.gene049488.t1 MTR_1g009750 36.822 258 136 8 5 254 73 311 3.07e-37 133
MS.gene049488.t1 MTR_2g008160 34.766 256 124 8 5 254 70 288 1.81e-33 123
MS.gene049488.t1 MTR_2g008160 46.400 125 62 3 5 129 70 189 9.74e-28 105
MS.gene049488.t1 MTR_5g074770 52.083 96 43 2 158 251 12 106 3.80e-27 101
MS.gene049488.t1 MTR_2g077980 29.348 276 149 8 21 253 11 283 6.89e-27 105
MS.gene049488.t1 MTR_2g078560 30.973 226 119 5 64 253 95 319 7.06e-27 106
MS.gene049488.t1 MTR_3g072260 76.190 63 15 0 5 67 72 134 2.21e-25 97.8
MS.gene049488.t1 MTR_7g086790 32.990 194 110 5 1 193 12 186 3.81e-24 96.3
MS.gene049488.t1 MTR_4g031040 36.686 169 67 5 20 188 3 131 9.80e-24 93.2
MS.gene049488.t1 MTR_5g058120 36.306 157 90 3 96 250 7 155 2.54e-23 95.5
MS.gene049488.t1 MTR_3g462850 36.986 146 72 6 124 254 9 149 3.32e-20 84.3
MS.gene049488.t1 MTR_3g107060 27.854 219 100 7 26 233 139 310 6.95e-16 76.3
MS.gene049488.t1 MTR_6g048160 56.923 65 24 2 5 69 29 89 2.24e-15 70.1
MS.gene049488.t1 MTR_1g098320 44.737 76 42 0 175 250 45 120 2.38e-15 71.2
MS.gene049488.t1 MTR_4g114220 58.065 62 16 2 5 66 49 100 3.07e-13 65.5
MS.gene049488.t1 MTR_6g071110 37.736 106 52 3 15 120 70 161 1.07e-11 62.0
MS.gene049488.t1 MTR_7g086785 41.667 72 41 1 5 76 4 74 2.30e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049488.t1 AT5G05340 70.732 246 71 1 5 250 76 320 1.86e-126 362
MS.gene049488.t1 AT5G58390 68.000 250 80 0 5 254 67 316 1.20e-124 357
MS.gene049488.t1 AT5G58400 68.000 250 80 0 5 254 76 325 1.33e-124 357
MS.gene049488.t1 AT1G14550 55.159 252 109 4 5 254 72 321 8.96e-92 273
MS.gene049488.t1 AT1G14540 50.794 252 119 4 5 254 67 315 8.11e-83 251
MS.gene049488.t1 AT5G66390 47.287 258 125 4 5 254 79 333 8.62e-83 251
MS.gene049488.t1 AT4G36430 48.062 258 123 4 5 254 76 330 1.48e-82 250
MS.gene049488.t1 AT1G44970 49.421 259 119 4 5 254 91 346 3.94e-82 250
MS.gene049488.t1 AT2G18150 47.674 258 124 4 5 254 82 336 2.12e-81 248
MS.gene049488.t1 AT3G50990 47.674 258 124 5 5 254 87 341 3.11e-80 245
MS.gene049488.t1 AT2G35380 49.057 265 119 5 3 254 74 335 4.80e-79 241
MS.gene049488.t1 AT5G06720 47.490 259 124 4 5 254 78 333 5.91e-79 241
MS.gene049488.t1 AT2G18140 47.287 258 125 4 5 254 81 335 6.41e-79 241
MS.gene049488.t1 AT5G06730 47.490 259 124 5 5 254 79 334 2.42e-78 241
MS.gene049488.t1 AT4G16270 49.615 260 114 6 5 254 96 348 1.45e-77 238
MS.gene049488.t1 AT1G68850 44.106 263 131 5 5 254 76 335 1.54e-76 235
MS.gene049488.t1 AT2G38390 48.846 260 120 6 5 254 77 333 6.63e-76 234
MS.gene049488.t1 AT1G49570 48.627 255 120 4 5 250 94 346 1.92e-74 230
MS.gene049488.t1 AT2G35380 49.798 247 108 5 21 254 4 247 1.93e-74 227
MS.gene049488.t1 AT2G38380 47.308 260 124 6 5 254 77 333 3.00e-72 224
MS.gene049488.t1 AT3G32980 46.360 261 126 5 5 254 77 334 7.44e-72 224
MS.gene049488.t1 AT4G08780 46.360 261 126 5 5 254 70 327 9.05e-72 223
MS.gene049488.t1 AT4G08770 46.743 261 125 5 5 254 70 327 4.13e-70 219
MS.gene049488.t1 AT5G19890 46.743 261 119 6 5 254 76 327 4.60e-70 218
MS.gene049488.t1 AT2G22420 44.358 257 130 5 5 254 69 319 5.19e-69 216
MS.gene049488.t1 AT3G49110 45.977 261 127 5 5 254 79 336 2.92e-68 214
MS.gene049488.t1 AT4G33420 47.410 251 123 5 5 254 83 325 1.28e-67 212
MS.gene049488.t1 AT4G33420 47.410 251 123 5 5 254 130 372 6.07e-67 212
MS.gene049488.t1 AT5G19880 44.275 262 131 5 5 254 71 329 8.86e-67 210
MS.gene049488.t1 AT3G49120 44.828 261 130 5 5 254 78 335 1.92e-66 210
MS.gene049488.t1 AT5G51890 42.802 257 134 5 5 254 72 322 2.96e-63 201
MS.gene049488.t1 AT3G01190 41.860 258 134 6 5 254 72 321 7.42e-61 194
MS.gene049488.t1 AT5G17820 42.248 258 127 7 5 254 70 313 1.11e-58 189
MS.gene049488.t1 AT1G05260 42.471 259 135 7 5 254 72 325 2.13e-58 188
MS.gene049488.t1 AT4G11290 40.541 259 142 5 5 254 71 326 2.73e-58 188
MS.gene049488.t1 AT5G15180 40.154 259 139 7 5 254 78 329 4.22e-58 188
MS.gene049488.t1 AT5G17820 42.248 258 127 7 5 254 123 366 9.40e-58 188
MS.gene049488.t1 AT5G64120 40.078 257 138 6 5 254 81 328 1.69e-57 186
MS.gene049488.t1 AT5G42180 41.732 254 133 7 5 251 69 314 2.91e-55 180
MS.gene049488.t1 AT3G03670 40.385 260 138 5 5 254 69 321 3.21e-55 180
MS.gene049488.t1 AT1G71695 39.921 253 146 4 5 254 90 339 1.59e-54 179
MS.gene049488.t1 AT1G30870 39.615 260 136 6 5 254 97 345 2.44e-54 179
MS.gene049488.t1 AT3G21770 41.569 255 135 7 5 250 75 324 3.71e-54 177
MS.gene049488.t1 AT2G41480 40.076 262 137 7 5 254 75 328 6.46e-54 177
MS.gene049488.t1 AT1G05240 37.891 256 143 6 5 250 72 321 1.50e-53 176
MS.gene049488.t1 AT1G05250 37.891 256 143 6 5 250 72 321 1.50e-53 176
MS.gene049488.t1 AT5G40150 36.759 253 155 4 5 254 78 328 5.48e-53 174
MS.gene049488.t1 AT5G14130 37.066 259 148 5 5 254 78 330 7.38e-53 174
MS.gene049488.t1 AT5G14130 37.066 259 148 5 5 254 119 371 2.43e-52 174
MS.gene049488.t1 AT1G34510 39.442 251 142 6 5 254 68 309 3.59e-52 172
MS.gene049488.t1 AT5G39580 40.467 257 138 7 5 254 71 319 2.14e-51 170
MS.gene049488.t1 AT3G28200 35.714 252 158 4 5 254 67 316 1.24e-50 168
MS.gene049488.t1 AT4G26010 39.044 251 143 4 5 254 68 309 1.46e-50 168
MS.gene049488.t1 AT4G26010 39.044 251 143 4 5 254 96 337 2.68e-50 168
MS.gene049488.t1 AT4G17690 37.795 254 151 5 5 254 72 322 1.00e-49 166
MS.gene049488.t1 AT4G33870 32.168 286 152 5 5 250 114 397 6.41e-49 166
MS.gene049488.t1 AT4G37530 36.782 261 150 6 5 254 73 329 1.06e-47 161
MS.gene049488.t1 AT5G47000 37.891 256 149 6 5 254 79 330 1.19e-47 161
MS.gene049488.t1 AT4G25980 37.643 263 143 7 5 254 72 326 1.41e-47 160
MS.gene049488.t1 AT5G67400 38.168 262 145 7 5 254 73 329 2.32e-47 160
MS.gene049488.t1 AT2G18980 39.924 263 135 8 5 254 71 323 2.53e-47 160
MS.gene049488.t1 AT1G77100 38.521 257 144 7 5 254 70 319 1.34e-46 158
MS.gene049488.t1 AT2G37130 35.573 253 157 5 6 254 46 296 1.61e-46 157
MS.gene049488.t1 AT2G37130 35.573 253 157 5 6 254 77 327 3.75e-46 157
MS.gene049488.t1 AT4G30170 37.786 262 142 6 5 254 73 325 4.67e-46 157
MS.gene049488.t1 AT2G34060 39.382 259 142 7 5 251 88 343 4.96e-46 157
MS.gene049488.t1 AT2G24800 33.591 259 157 5 5 254 77 329 5.03e-46 157
MS.gene049488.t1 AT4G31760 34.363 259 154 5 5 254 75 326 1.78e-45 155
MS.gene049488.t1 AT5G64100 35.000 260 148 6 5 254 83 331 8.18e-45 154
MS.gene049488.t1 AT4G37520 36.641 262 149 7 5 254 73 329 1.02e-44 153
MS.gene049488.t1 AT5G64110 36.538 260 146 6 5 254 80 330 1.70e-44 152
MS.gene049488.t1 AT1G24110 36.434 258 153 5 5 254 68 322 2.67e-44 152
MS.gene049488.t1 AT5G24070 33.846 260 155 5 5 254 83 335 7.96e-44 151
MS.gene049488.t1 AT4G37520 36.260 262 147 8 5 254 73 326 6.65e-43 148
MS.gene049488.t1 AT3G49960 36.260 262 150 8 5 254 73 329 1.92e-42 147
MS.gene049488.t1 AT4G21960 33.065 248 161 4 6 250 78 323 3.00e-42 147
MS.gene049488.t1 AT2G43480 33.077 260 157 4 5 254 83 335 7.00e-42 146
MS.gene049488.t1 AT2G39040 36.782 261 152 7 5 254 92 350 7.84e-41 144
MS.gene049488.t1 AT4G37530 39.048 210 113 6 5 203 73 278 2.57e-38 135
MS.gene049488.t1 AT5G22410 35.385 260 146 9 5 252 74 323 1.15e-37 135
MS.gene049488.t1 AT3G17070 30.040 253 169 3 5 250 21 272 6.05e-35 126
MS.gene049488.t1 AT3G17070 30.040 253 169 3 5 250 84 335 1.81e-34 127
MS.gene049488.t1 AT5G39580 41.667 156 81 4 5 160 71 216 2.43e-28 108
MS.gene049488.t1 AT4G25980 43.902 123 64 3 5 127 117 234 3.27e-27 106
MS.gene049488.t1 AT2G24800 39.669 121 68 2 5 125 77 192 6.00e-22 91.7
MS.gene049488.t1 AT4G32320 29.461 241 108 6 8 233 126 319 9.82e-16 75.9
MS.gene049488.t1 AT3G42570 30.693 101 70 0 27 127 49 149 1.39e-13 67.0
MS.gene049488.t1 AT4G35970 29.279 222 102 9 2 217 49 221 6.17e-12 63.9

Find 51 sgRNAs with CRISPR-Local

Find 170 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCCTTGTTTCCCAGTTAA+AGG 0.132682 3.2:-56850270 None:intergenic
TCTCCTGAGCCACTTGTTCT+AGG 0.244890 3.2:-56850036 None:intergenic
AAGGACATGGTTGCTTTATC+TGG 0.287607 3.2:+56849065 MS.gene049488:CDS
GGAGATAATAAGCCTTTAAC+TGG 0.288260 3.2:+56850258 MS.gene049488:CDS
CTGGGAAACAAGGGGAGATT+AGG 0.373206 3.2:+56850277 MS.gene049488:CDS
AATTGATGCTATAAAATCTA+AGG 0.374906 3.2:+56848078 MS.gene049488:CDS
CCTCTCACCGAATTGTTGTT+AGG 0.386036 3.2:-56848046 None:intergenic
TGTAGCTGCAATAATTAAGA+TGG 0.418174 3.2:+56850236 MS.gene049488:CDS
AAGTTGAGATAAGGTTGGTT+AGG 0.432446 3.2:-56849019 None:intergenic
TTTCAGGAGCTCACACAATA+GGG 0.432739 3.2:+56849926 MS.gene049488:intron
GGGAGATTAGGAAGAATTGT+AGG 0.435594 3.2:+56850289 MS.gene049488:CDS
CTCCTGAGCCACTTGTTCTA+GGG 0.446044 3.2:-56850035 None:intergenic
GAGCTTTAAAAGTTGAGATA+AGG 0.452562 3.2:-56849028 None:intergenic
ACAGTACATTTGCTAAGATA+AGG 0.454514 3.2:+56850001 MS.gene049488:CDS
AGGTTGGTTAGGTTAGATGT+AGG 0.468281 3.2:-56849008 None:intergenic
TGCCCTAGAACAAGTGGCTC+AGG 0.473241 3.2:+56850033 MS.gene049488:CDS
AAGAATCTCATTATCAAAAG+AGG 0.477009 3.2:+56850117 MS.gene049488:CDS
TGCAGCTCCTAACAACAATT+CGG 0.483149 3.2:+56848039 MS.gene049488:CDS
GTTAGGTTAGATGTAGGAGC+TGG 0.487957 3.2:-56849002 None:intergenic
AATTTCACTGCTGCAAACAC+TGG 0.493527 3.2:+56848972 MS.gene049488:CDS
AAAACAAAATAGGGTTGTGA+TGG 0.494547 3.2:+56847971 MS.gene049488:intron
AAGCCTTTAACTGGGAAACA+AGG 0.501073 3.2:+56850267 MS.gene049488:CDS
TTTAAAAGTTGAGATAAGGT+TGG 0.503940 3.2:-56849024 None:intergenic
AGATAAAGCAACCATGTCCT+TGG 0.505640 3.2:-56849063 None:intergenic
ATTTCACTGCTGCAAACACT+GGG 0.508356 3.2:+56848973 MS.gene049488:CDS
TCTGATCAAGTACTCTTCAA+TGG 0.517394 3.2:+56850150 MS.gene049488:CDS
TCAGCACATGAGACCACACC+GGG 0.520500 3.2:-56848115 None:intergenic
GTAGCTGCAATAATTAAGAT+GGG 0.525050 3.2:+56850237 MS.gene049488:CDS
GATGACACTTCATCCTTCAA+AGG 0.526121 3.2:+56848007 MS.gene049488:CDS
AGGACTTTCTGCCAAGGACA+TGG 0.532504 3.2:+56849052 MS.gene049488:CDS
TAATTGTTGTCAAAATGAGT+TGG 0.535271 3.2:-56850090 None:intergenic
AGCTACAAAATCAGAATCAA+AGG 0.554480 3.2:-56850220 None:intergenic
GGTCTCATGTGCTGATATAG+TGG 0.564157 3.2:+56848123 MS.gene049488:CDS
AACAGAATCACGAGCAGTAA+TGG 0.568501 3.2:-56848146 None:intergenic
CCTAACAACAATTCGGTGAG+AGG 0.578364 3.2:+56848046 MS.gene049488:CDS
GCAAGGTGTACAAGTTTCAG+AGG 0.580296 3.2:+56849952 MS.gene049488:CDS
AGCCTTTAACTGGGAAACAA+GGG 0.580782 3.2:+56850268 MS.gene049488:CDS
AAGAACTGCCCTAGAACAAG+TGG 0.582954 3.2:+56850027 MS.gene049488:CDS
CTCACACAATAGGGAGAGCA+AGG 0.588677 3.2:+56849935 MS.gene049488:CDS
AAACAAAATAGGGTTGTGAT+GGG 0.589771 3.2:+56847972 MS.gene049488:intron
TGATGCTATAAAATCTAAGG+TGG 0.606554 3.2:+56848081 MS.gene049488:CDS
AGCTCAAGGACTTTCTGCCA+AGG 0.614786 3.2:+56849046 MS.gene049488:CDS
AAGTTGGGAGAAGAGATTCA+AGG 0.621582 3.2:+56848943 MS.gene049488:CDS
GCCTTTAACTGGGAAACAAG+GGG 0.634825 3.2:+56850269 MS.gene049488:CDS
GATCAAGTACTCTTCAATGG+TGG 0.638235 3.2:+56850153 MS.gene049488:CDS
ATCAGCACATGAGACCACAC+CGG 0.642740 3.2:-56848116 None:intergenic
AAGGTGGAAGCAATATGCCC+CGG 0.653465 3.2:+56848097 MS.gene049488:CDS
GAGATAATAAGCCTTTAACT+GGG 0.654488 3.2:+56850259 MS.gene049488:CDS
GGAAGCAATATGCCCCGGTG+TGG 0.677996 3.2:+56848102 MS.gene049488:CDS
TTTCACTGCTGCAAACACTG+GGG 0.769355 3.2:+56848974 MS.gene049488:CDS
CAGCACATGAGACCACACCG+GGG 0.839989 3.2:-56848114 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATTA+TGG - chr3.2:56848816-56848835 None:intergenic 0.0%
!!! ATGAATTAACTATTTTTTTA+AGG - chr3.2:56847580-56847599 None:intergenic 10.0%
!!! GTATTTATTTGAAATAAAAA+TGG - chr3.2:56849498-56849517 None:intergenic 10.0%
!!! TTTTTTGTTACTTTTTTTTT+TGG + chr3.2:56847411-56847430 MS.gene049488:intron 10.0%
!! AAAATTATATGAATCTTTGA+CGG + chr3.2:56849731-56849750 MS.gene049488:intron 15.0%
!! AAGAAAAAAAACTTAAAAGT+CGG + chr3.2:56847656-56847675 MS.gene049488:intron 15.0%
!!! AAACATAATTGACAATTTTT+AGG + chr3.2:56848238-56848257 MS.gene049488:intron 15.0%
!!! AAATTTTTCATATCATCTTA+TGG - chr3.2:56847495-56847514 None:intergenic 15.0%
!!! AACATAATTGACAATTTTTA+GGG + chr3.2:56848239-56848258 MS.gene049488:intron 15.0%
!!! TTAATAACATAATTTGTGTA+GGG - chr3.2:56847615-56847634 None:intergenic 15.0%
!!! TTGTTTTAAGTTTCAAATAA+TGG - chr3.2:56849126-56849145 None:intergenic 15.0%
!!! TTTAATAACATAATTTGTGT+AGG - chr3.2:56847616-56847635 None:intergenic 15.0%
!!! TTTTTTTTCTTTTTCTTGTA+TGG - chr3.2:56847647-56847666 None:intergenic 15.0%
!! AAAAAAAACCCTACAAATAT+GGG + chr3.2:56849864-56849883 MS.gene049488:intron 20.0%
!! AAAAGAAAAAATAACTAGCA+AGG + chr3.2:56849559-56849578 MS.gene049488:intron 20.0%
!! AACATGTAATAATCAAAACA+AGG - chr3.2:56847448-56847467 None:intergenic 20.0%
!! AATATTACCATTTGAGAATA+TGG + chr3.2:56848692-56848711 MS.gene049488:intron 20.0%
!! AATTGATGCTATAAAATCTA+AGG + chr3.2:56848078-56848097 MS.gene049488:CDS 20.0%
!! AGAAAAAAAACTTAAAAGTC+GGG + chr3.2:56847657-56847676 MS.gene049488:intron 20.0%
!!! ATAAAACTGTTTTATCTACA+TGG - chr3.2:56849772-56849791 None:intergenic 20.0%
!!! ATTTATCTTTTTGTCTCTTT+AGG + chr3.2:56849147-56849166 MS.gene049488:intron 20.0%
!!! CATTATTTTATAAAAAGGGT+AGG - chr3.2:56848791-56848810 None:intergenic 20.0%
!!! CTACCCTTTTTATAAAATAA+TGG + chr3.2:56848789-56848808 MS.gene049488:intron 20.0%
!!! GGACCATTATTTTATAAAAA+GGG - chr3.2:56848795-56848814 None:intergenic 20.0%
!!! TAATAACATAATTTGTGTAG+GGG - chr3.2:56847614-56847633 None:intergenic 20.0%
!!! TCTATTCATGATATTTTATG+TGG + chr3.2:56849902-56849921 MS.gene049488:intron 20.0%
!!! TGGACCATTATTTTATAAAA+AGG - chr3.2:56848796-56848815 None:intergenic 20.0%
!!! TTAATTTGTATTTTGTAGCT+TGG + chr3.2:56848900-56848919 MS.gene049488:intron 20.0%
!!! TTCAAGTTATTGATATTTAG+AGG + chr3.2:56847178-56847197 MS.gene049488:intron 20.0%
!!! TTCTTTTTTTCTTAATTGCA+TGG - chr3.2:56849380-56849399 None:intergenic 20.0%
! AAAAAAAACTTAAAAGTCGG+GGG + chr3.2:56847659-56847678 MS.gene049488:intron 25.0%
! AAAAAGTAACCAAAACAACA+AGG - chr3.2:56847395-56847414 None:intergenic 25.0%
! AAAATTCAGTGTTAGTAGAT+TGG - chr3.2:56848193-56848212 None:intergenic 25.0%
! AAGAATCTCATTATCAAAAG+AGG + chr3.2:56850117-56850136 MS.gene049488:CDS 25.0%
! AATAATGTCCCATATTTGTA+GGG - chr3.2:56849875-56849894 None:intergenic 25.0%
! AATTAGTCCATATTCTCAAA+TGG - chr3.2:56848702-56848721 None:intergenic 25.0%
! CAACCACTAATAATTAATCA+AGG + chr3.2:56849218-56849237 MS.gene049488:intron 25.0%
! CATCCTTGATTAATTATTAG+TGG - chr3.2:56849224-56849243 None:intergenic 25.0%
! CCATAATGATTTCTATGATT+GGG + chr3.2:56849442-56849461 MS.gene049488:intron 25.0%
! CTCACTACATAATTGTTATA+CGG + chr3.2:56849294-56849313 MS.gene049488:intron 25.0%
! CTCACTTTAATCTTTAATGA+TGG + chr3.2:56847298-56847317 MS.gene049488:intron 25.0%
! CTTGATTAATTATTAGTGGT+TGG - chr3.2:56849220-56849239 None:intergenic 25.0%
! GAAAAAAAACCCTACAAATA+TGG + chr3.2:56849863-56849882 MS.gene049488:intron 25.0%
! GAAAAAAAACTTAAAAGTCG+GGG + chr3.2:56847658-56847677 MS.gene049488:intron 25.0%
! GAAATAAAAATGGTTGTTTG+TGG - chr3.2:56849488-56849507 None:intergenic 25.0%
! GCTGTTTGAAAAACAAAATA+GGG + chr3.2:56847962-56847981 MS.gene049488:intron 25.0%
! TAAAATTACCGAAAACCTAA+TGG + chr3.2:56847254-56847273 MS.gene049488:intron 25.0%
! TAATTGTTGTCAAAATGAGT+TGG - chr3.2:56850093-56850112 None:intergenic 25.0%
! TCCATAATGATTTCTATGAT+TGG + chr3.2:56849441-56849460 MS.gene049488:intron 25.0%
! TTTAAAAGTTGAGATAAGGT+TGG - chr3.2:56849027-56849046 None:intergenic 25.0%
! TTTAATCCTTTGTGTTTGTT+TGG - chr3.2:56848730-56848749 None:intergenic 25.0%
!! AATTATTTAGACCTTTTGCA+TGG - chr3.2:56848409-56848428 None:intergenic 25.0%
!! TGATATTTTATGTGGTTTTC+AGG + chr3.2:56849910-56849929 MS.gene049488:intron 25.0%
!! TGCTGTTTGAAAAACAAAAT+AGG + chr3.2:56847961-56847980 MS.gene049488:intron 25.0%
!! TTATTAGTGGTTGGTTAAAA+CGG - chr3.2:56849211-56849230 None:intergenic 25.0%
!! TTTCAAATAATGGAAGACAA+AGG - chr3.2:56849116-56849135 None:intergenic 25.0%
!!! AAATTTGAACCTTGTTGTTT+TGG + chr3.2:56847383-56847402 MS.gene049488:intron 25.0%
!!! AACATTACTTGAAGTTTTGA+AGG - chr3.2:56847362-56847381 None:intergenic 25.0%
!!! GAAATATGTTTTTTCACAGA+GGG - chr3.2:56849697-56849716 None:intergenic 25.0%
!!! TGAAATATGTTTTTTCACAG+AGG - chr3.2:56849698-56849717 None:intergenic 25.0%
AAAAAAACTTAAAAGTCGGG+GGG + chr3.2:56847660-56847679 MS.gene049488:intron 30.0%
AAAACAAAATAGGGTTGTGA+TGG + chr3.2:56847971-56847990 MS.gene049488:intron 30.0%
AAACAAAATAGGGTTGTGAT+GGG + chr3.2:56847972-56847991 MS.gene049488:intron 30.0%
AAATCTCCTCATCATACAAA+TGG - chr3.2:56847146-56847165 None:intergenic 30.0%
AAGGATGCAATTACATATTC+AGG - chr3.2:56848602-56848621 None:intergenic 30.0%
AGCTACAAAATCAGAATCAA+AGG - chr3.2:56850223-56850242 None:intergenic 30.0%
AGTCATCAACAAATCCAATT+AGG + chr3.2:56848664-56848683 MS.gene049488:intron 30.0%
CAATAATGTCCCATATTTGT+AGG - chr3.2:56849876-56849895 None:intergenic 30.0%
CCCAATCATAGAAATCATTA+TGG - chr3.2:56849445-56849464 None:intergenic 30.0%
GAGATAATAAGCCTTTAACT+GGG + chr3.2:56850259-56850278 MS.gene049488:CDS 30.0%
GCATTAGCATAGTGATAAAA+AGG + chr3.2:56847712-56847731 MS.gene049488:intron 30.0%
GTAGCTGCAATAATTAAGAT+GGG + chr3.2:56850237-56850256 MS.gene049488:CDS 30.0%
GTCATATTTGCACAAAATTG+TGG - chr3.2:56848346-56848365 None:intergenic 30.0%
TGATGCTATAAAATCTAAGG+TGG + chr3.2:56848081-56848100 MS.gene049488:CDS 30.0%
TGTAGCTGCAATAATTAAGA+TGG + chr3.2:56850236-56850255 MS.gene049488:CDS 30.0%
! AATCAAAGGTCTTTTCATTC+TGG - chr3.2:56850209-56850228 None:intergenic 30.0%
! ACAGTACATTTGCTAAGATA+AGG + chr3.2:56850001-56850020 MS.gene049488:CDS 30.0%
! ATTTGTATTTTGTAGCTTGG+AGG + chr3.2:56848903-56848922 MS.gene049488:intron 30.0%
! GCAATTTAAAACCATGCAAA+AGG + chr3.2:56848395-56848414 MS.gene049488:intron 30.0%
! GGTAATATTGATGACCTAAT+TGG - chr3.2:56848681-56848700 None:intergenic 30.0%
! TATCTTTTTGTCTCTTTAGG+AGG + chr3.2:56849150-56849169 MS.gene049488:intron 30.0%
! TGAGAATATGGACTAATTCT+TGG + chr3.2:56848704-56848723 MS.gene049488:intron 30.0%
! TTTTACGTGTGCATCTTTTT+TGG - chr3.2:56847239-56847258 None:intergenic 30.0%
!! AGTTTTAACAAGTGAATCAG+TGG - chr3.2:56850181-56850200 None:intergenic 30.0%
!! ATCTTTTTGTCTCTTTAGGA+GGG + chr3.2:56849151-56849170 MS.gene049488:intron 30.0%
!! CTTTTTGGAAGGTAAAAGTT+GGG + chr3.2:56848928-56848947 MS.gene049488:CDS 30.0%
!! GAGCTTTAAAAGTTGAGATA+AGG - chr3.2:56849031-56849050 None:intergenic 30.0%
!!! ATCTCAACTTTTAAAGCTCA+AGG + chr3.2:56849032-56849051 MS.gene049488:CDS 30.0%
!!! TTTACGTGTGCATCTTTTTT+GGG - chr3.2:56847238-56847257 None:intergenic 30.0%
AAATGGTTGTTTGTGGTAGT+TGG - chr3.2:56849481-56849500 None:intergenic 35.0%
AACGACTCAGATTATCTTAC+TGG + chr3.2:56848530-56848549 MS.gene049488:intron 35.0%
ACAAGGTTGTTGTACTACTT+CGG + chr3.2:56847687-56847706 MS.gene049488:intron 35.0%
ACATGTTATACACATGCACA+AGG + chr3.2:56847461-56847480 MS.gene049488:intron 35.0%
ATATGACCTTTCAAGCCATT+AGG - chr3.2:56847272-56847291 None:intergenic 35.0%
ATTATGAATGATTACGACCG+TGG + chr3.2:56848560-56848579 MS.gene049488:intron 35.0%
CAAAAATGCATGTGCTATGT+AGG - chr3.2:56847073-56847092 None:intergenic 35.0%
CATGTTGCAAAAAACACATG+CGG + chr3.2:56848467-56848486 MS.gene049488:intron 35.0%
CATTGACCATTTGTATGATG+AGG + chr3.2:56847137-56847156 MS.gene049488:intron 35.0%
GATAGATAGATACATGCACA+TGG + chr3.2:56847327-56847346 MS.gene049488:intron 35.0%
GATGAACACATCATCTCAAT+TGG - chr3.2:56849420-56849439 None:intergenic 35.0%
GCTACATGTATGAATCTTGT+TGG - chr3.2:56849623-56849642 None:intergenic 35.0%
GGAGATAATAAGCCTTTAAC+TGG + chr3.2:56850258-56850277 MS.gene049488:CDS 35.0%
TCTGATCAAGTACTCTTCAA+TGG + chr3.2:56850150-56850169 MS.gene049488:CDS 35.0%
! AAAGGGTAGGATTACTCTTT+TGG - chr3.2:56848778-56848797 None:intergenic 35.0%
! AAGTTGAGATAAGGTTGGTT+AGG - chr3.2:56849022-56849041 None:intergenic 35.0%
! CCAACTTTTACCTTCCAAAA+AGG - chr3.2:56848930-56848949 None:intergenic 35.0%
! CTTCTGCAACTTTTTGGATT+TGG - chr3.2:56848642-56848661 None:intergenic 35.0%
! CTTTCAAGCCATTAGGTTTT+CGG - chr3.2:56847265-56847284 None:intergenic 35.0%
! GACTTTCTTCTGCAACTTTT+TGG - chr3.2:56848648-56848667 None:intergenic 35.0%
!! CCTTTTTGGAAGGTAAAAGT+TGG + chr3.2:56848927-56848946 MS.gene049488:CDS 35.0%
AACAGAATCACGAGCAGTAA+TGG - chr3.2:56848149-56848168 None:intergenic 40.0%
AAGCCTTTAACTGGGAAACA+AGG + chr3.2:56850267-56850286 MS.gene049488:CDS 40.0%
AAGTTGGGAGAAGAGATTCA+AGG + chr3.2:56848943-56848962 MS.gene049488:CDS 40.0%
AATTACATATTCAGGCCGTC+AGG - chr3.2:56848594-56848613 None:intergenic 40.0%
AATTTCACTGCTGCAAACAC+TGG + chr3.2:56848972-56848991 MS.gene049488:CDS 40.0%
AGATAAAGCAACCATGTCCT+TGG - chr3.2:56849066-56849085 None:intergenic 40.0%
AGCCTTTAACTGGGAAACAA+GGG + chr3.2:56850268-56850287 MS.gene049488:CDS 40.0%
AGGGAGACACGATTTAGTTA+TGG + chr3.2:56849170-56849189 MS.gene049488:intron 40.0%
ATTTCACTGCTGCAAACACT+GGG + chr3.2:56848973-56848992 MS.gene049488:CDS 40.0%
CGAAAACCTAATGGCTTGAA+AGG + chr3.2:56847263-56847282 MS.gene049488:intron 40.0%
GATCAAGTACTCTTCAATGG+TGG + chr3.2:56850153-56850172 MS.gene049488:CDS 40.0%
GATGACACTTCATCCTTCAA+AGG + chr3.2:56848007-56848026 MS.gene049488:CDS 40.0%
GGGAGATTAGGAAGAATTGT+AGG + chr3.2:56850289-56850308 MS.gene049488:CDS 40.0%
TCTTGGCCAAACAAACACAA+AGG + chr3.2:56848721-56848740 MS.gene049488:intron 40.0%
TGCAGCTCCTAACAACAATT+CGG + chr3.2:56848039-56848058 MS.gene049488:CDS 40.0%
TTTCAGGAGCTCACACAATA+GGG + chr3.2:56849926-56849945 MS.gene049488:intron 40.0%
! AAGGACATGGTTGCTTTATC+TGG + chr3.2:56849065-56849084 MS.gene049488:CDS 40.0%
! AGCCAAGTGTCTGTAACTTT+TGG + chr3.2:56849640-56849659 MS.gene049488:intron 40.0%
! AGGTTGGTTAGGTTAGATGT+AGG - chr3.2:56849011-56849030 None:intergenic 40.0%
! CCAAGTGTCTGTAACTTTTG+GGG + chr3.2:56849642-56849661 MS.gene049488:intron 40.0%
! GCCAAGTGTCTGTAACTTTT+GGG + chr3.2:56849641-56849660 MS.gene049488:intron 40.0%
! TAATTTGTGTAGGGGAGATG+AGG - chr3.2:56847606-56847625 None:intergenic 40.0%
! TGCAGTTTTCTCTCCTTTGA+AGG - chr3.2:56848023-56848042 None:intergenic 40.0%
!! AAAGCAGTTGAGCGGATTTT+TGG + chr3.2:56849667-56849686 MS.gene049488:intron 40.0%
!! TTTTCAGGAGCTCACACAAT+AGG + chr3.2:56849925-56849944 MS.gene049488:intron 40.0%
!!! TGTGCATCTTTTTTGGGACA+AGG - chr3.2:56847232-56847251 None:intergenic 40.0%
AAAAGTCGGGGGGATATACA+AGG + chr3.2:56847670-56847689 MS.gene049488:intron 45.0%
AAGAACTGCCCTAGAACAAG+TGG + chr3.2:56850027-56850046 MS.gene049488:CDS 45.0%
AGATACATGCACATGGACGA+TGG + chr3.2:56847334-56847353 MS.gene049488:intron 45.0%
CCCCAAAAGTTACAGACACT+TGG - chr3.2:56849645-56849664 None:intergenic 45.0%
GCAAGGTGTACAAGTTTCAG+AGG + chr3.2:56849952-56849971 MS.gene049488:CDS 45.0%
GCCTTTAACTGGGAAACAAG+GGG + chr3.2:56850269-56850288 MS.gene049488:CDS 45.0%
GTTAGGTTAGATGTAGGAGC+TGG - chr3.2:56849005-56849024 None:intergenic 45.0%
TTGGGGTTAAAGCAGTTGAG+CGG + chr3.2:56849659-56849678 MS.gene049488:intron 45.0%
TTTCACTGCTGCAAACACTG+GGG + chr3.2:56848974-56848993 MS.gene049488:CDS 45.0%
! CCTAACAACAATTCGGTGAG+AGG + chr3.2:56848046-56848065 MS.gene049488:CDS 45.0%
! CCTCTCACCGAATTGTTGTT+AGG - chr3.2:56848049-56848068 None:intergenic 45.0%
! GGTCTCATGTGCTGATATAG+TGG + chr3.2:56848123-56848142 MS.gene049488:CDS 45.0%
! TCCCCTTGTTTCCCAGTTAA+AGG - chr3.2:56850273-56850292 None:intergenic 45.0%
! TGTAGCTTGGAGGTCCTTTT+TGG + chr3.2:56848913-56848932 MS.gene049488:intron 45.0%
! TTTGACGTGTGCAGTTGGTA+TGG - chr3.2:56847209-56847228 None:intergenic 45.0%
AAGGTGGAAGCAATATGCCC+CGG + chr3.2:56848097-56848116 MS.gene049488:CDS 50.0%
AGCTCAAGGACTTTCTGCCA+AGG + chr3.2:56849046-56849065 MS.gene049488:CDS 50.0%
AGGACTTTCTGCCAAGGACA+TGG + chr3.2:56849052-56849071 MS.gene049488:CDS 50.0%
ATCAGCACATGAGACCACAC+CGG - chr3.2:56848119-56848138 None:intergenic 50.0%
CAAGGTTTGACGTGTGCAGT+TGG - chr3.2:56847214-56847233 None:intergenic 50.0%
CTCACACAATAGGGAGAGCA+AGG + chr3.2:56849935-56849954 MS.gene049488:CDS 50.0%
CTCCTGAGCCACTTGTTCTA+GGG - chr3.2:56850038-56850057 None:intergenic 50.0%
CTGGGAAACAAGGGGAGATT+AGG + chr3.2:56850277-56850296 MS.gene049488:CDS 50.0%
TCTCCTGAGCCACTTGTTCT+AGG - chr3.2:56850039-56850058 None:intergenic 50.0%
TGCATCCTTGAGTCGTTGCA+GGG + chr3.2:56848613-56848632 MS.gene049488:intron 50.0%
TTGCATCCTTGAGTCGTTGC+AGG + chr3.2:56848612-56848631 MS.gene049488:intron 50.0%
! ACCGTGGATTTGAGACCTGA+CGG + chr3.2:56848576-56848595 MS.gene049488:intron 50.0%
! GCTTGGAGGTCCTTTTTGGA+AGG + chr3.2:56848917-56848936 MS.gene049488:intron 50.0%
GCCGTCAGGTCTCAAATCCA+CGG - chr3.2:56848580-56848599 None:intergenic 55.0%
GGATTCCCTGCAACGACTCA+AGG - chr3.2:56848621-56848640 None:intergenic 55.0%
TCAGCACATGAGACCACACC+GGG - chr3.2:56848118-56848137 None:intergenic 55.0%
TGCCCTAGAACAAGTGGCTC+AGG + chr3.2:56850033-56850052 MS.gene049488:CDS 55.0%
CAGCACATGAGACCACACCG+GGG - chr3.2:56848117-56848136 None:intergenic 60.0%
GGAAGCAATATGCCCCGGTG+TGG + chr3.2:56848102-56848121 MS.gene049488:CDS 60.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 56847041 56850323 56847041 ID=MS.gene049488
chr3.2 mRNA 56847041 56850323 56847041 ID=MS.gene049488.t1;Parent=MS.gene049488
chr3.2 exon 56847041 56847052 56847041 ID=MS.gene049488.t1.exon1;Parent=MS.gene049488.t1
chr3.2 CDS 56847041 56847052 56847041 ID=cds.MS.gene049488.t1;Parent=MS.gene049488.t1
chr3.2 exon 56847983 56848174 56847983 ID=MS.gene049488.t1.exon2;Parent=MS.gene049488.t1
chr3.2 CDS 56847983 56848174 56847983 ID=cds.MS.gene049488.t1;Parent=MS.gene049488.t1
chr3.2 exon 56848918 56849086 56848918 ID=MS.gene049488.t1.exon3;Parent=MS.gene049488.t1
chr3.2 CDS 56848918 56849086 56848918 ID=cds.MS.gene049488.t1;Parent=MS.gene049488.t1
chr3.2 exon 56849932 56850323 56849932 ID=MS.gene049488.t1.exon4;Parent=MS.gene049488.t1
chr3.2 CDS 56849932 56850323 56849932 ID=cds.MS.gene049488.t1;Parent=MS.gene049488.t1
Gene Sequence

>MS.gene049488

ATGAAAACGTTTGTGAGTATAAAATAGTACCTACATAGCACATGCATTTTTGTTTTATTATCATGTTGTATATGTATATATATGCTATGCTATGATCATTGACCATTTGTATGATGAGGAGATTTTTTCAATCGCTTTTCAAGTTATTGATATTTAGAGGATTTGCCATACCAACTGCACACGTCAAACCTTGTCCCAAAAAAGATGCACACGTAAAATTACCGAAAACCTAATGGCTTGAAAGGTCATATATATAACTCACTTTAATCTTTAATGATGGTATATAGATAGATAGATACATGCACATGGACGATGGATCCTTCAAAACTTCAAGTAATGTTTAAATTTGAACCTTGTTGTTTTGGTTACTTTTTTTGTTACTTTTTTTTTTGGTTACATTTGAGCCTTGTTTTGATTATTACATGTTATACACATGCACAAGGATATACTACCATAAGATGATATGAAAAATTTCACTATTTAAATATTCATTTTTCATCTTTAATAAATAGATATGATTAATTAATTAATTTTTTCCTTAAAAAAATAGTTAATTCATTTTCCTCATCTCCCCTACACAAATTATGTTATTAAATTATAAGTCCATACAAGAAAAAGAAAAAAAACTTAAAAGTCGGGGGGATATACAAGGTTGTTGTACTACTTCGGATGCATTAGCATAGTGATAAAAAGGTCGACGTTTCGAACGTCGCTCTCAACATAATATTAACAATACTAATAGTTCTCGTTTTAAAAGAAAACACTTGTGTTCGAACATCACTCTCAACATAATATTAACAATACTAATAGTTCTCGTTTCAAAAGAGAACACTTACAACACTTCAAAATATTTTCAATTTTTAATCTAATTACTTATTGTAATGCTTCTCTATAATATTTTACTAGTTACATAATTATCATGCTGTTTGAAAAACAAAATAGGGTTGTGATGGGTCAATACTACTTGATGACACTTCATCCTTCAAAGGAGAGAAAACTGCAGCTCCTAACAACAATTCGGTGAGAGGTTATGAAGTAATTGATGCTATAAAATCTAAGGTGGAAGCAATATGCCCCGGTGTGGTCTCATGTGCTGATATAGTGGCCATTACTGCTCGTGATTCTGTTGTGATTGTAAGTACTTCAAAACCAATCTACTAACACTGAATTTTAGCAACTTTTTTGTCACTAATCTTTAAACATAATTGACAATTTTTAGGGTTAGATTATATTTTTAGTACTTTAACTTGATTTTCAGTTTCAATAAGTCTTTTTTTGTGTTAATACATCAGCATCATATTTCCACAATTTTGTGCAAATATGACATATGCTATTGCAATTGTGATTGCAGACTGCAATTTAAAACCATGCAAAAGGTCTAAATAATTAACGAAGAGATATTCAAATTTTATATAAGTCTAATATGCATGTTGCAAAAAACACATGCGGTTGCTAGTAATTTTACTTCTTAGTCGTTAATCGAAGATTGAACGACTCAGATTATCTTACTGGCAAACTAATTATGAATGATTACGACCGTGGATTTGAGACCTGACGGCCTGAATATGTAATTGCATCCTTGAGTCGTTGCAGGGAATCCAAATCCAAAAAGTTGCAGAAGAAAGTCATCAACAAATCCAATTAGGTCATCAATATTACCATTTGAGAATATGGACTAATTCTTGGCCAAACAAACACAAAGGATTAAATTAAATTTAAAATGAAATTAAATGACCAAAAGAGTAATCCTACCCTTTTTATAAAATAATGGTCCATAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTGTTTTCTGATAATATATTTAATTTGTATTTTGTAGCTTGGAGGTCCTTTTTGGAAGGTAAAAGTTGGGAGAAGAGATTCAAGGACAGCTAATTTCACTGCTGCAAACACTGGGGTGATTCCAGCTCCTACATCTAACCTAACCAACCTTATCTCAACTTTTAAAGCTCAAGGACTTTCTGCCAAGGACATGGTTGCTTTATCTGGTAATATTTCACTTTTTGATTTCTCACCTTTGTCTTCCATTATTTGAAACTTAAAACAATATTTATCTTTTTGTCTCTTTAGGAGGGAGACACGATTTAGTTATGGTTTTGCATGTAACAACCGTTTTAACCAACCACTAATAATTAATCAAGGATGTGACATTTAAACAACTAAATAGTTTATTTTATTTTTGAAGTAAAACAATACTCACTACATAATTGTTATACGGCGTGAAACGTCTATTTTTAAGTCTAAAGTCAGATCATGATCATAAATAAATAGCTTAAAGCCATGCAATTAAGAAAAAAAGAAATGAAAATTGTGTTTAACCAATTGAGATGATGTGTTCATCTTCCATAATGATTTCTATGATTGGGAAATTAAAGTAAACCAACTACCACAAACAACCATTTTTATTTCAAATAAATACTAGAAAAATATAACTAACAATTTTTCAACAAAAAAAAAAGTAAAAGAAAAAATAACTAGCAAGGAATTGTATAAATAAATAAATAAATAAATAAAATATTAGCCAACAAGATTCATACATGTAGCCAAGTGTCTGTAACTTTTGGGGTTAAAGCAGTTGAGCGGATTTTTGGTTTACCCTCTGTGAAAAAACATATTTCAACTTTGTCATTTGAAAATTATATGAATCTTTGACGGTGAATACAATAGTATCCATGTAGATAAAACAGTTTTATTTTAAAGAAACGAATAAAAAAACATTAAGAGTATTATATATTTTTATTGATAAGATGATGAAGAAGAAGAAGAAAAAAAACCCTACAAATATGGGACATTATTGAATGAGTCTATTCATGATATTTTATGTGGTTTTCAGGAGCTCACACAATAGGGAGAGCAAGGTGTACAAGTTTCAGAGGTCACATATACAACGACAGCAACATTGACAGTACATTTGCTAAGATAAGGCAAAAGAACTGCCCTAGAACAAGTGGCTCAGGAGACAACAATCTAGCAAATCTAGATTTGAGAACTCCAACTCATTTTGACAACAATTACTTCAAGAATCTCATTATCAAAAGAGGACTACTTCATTCTGATCAAGTACTCTTCAATGGTGGAACCACTGATTCACTTGTTAAAACTTATAGCCAGAATGAAAAGACCTTTGATTCTGATTTTGTAGCTGCAATAATTAAGATGGGAGATAATAAGCCTTTAACTGGGAAACAAGGGGAGATTAGGAAGAATTGTAGGAGCTTGAATTAG

Protein sequence

>MS.gene049488.t1

MKTFGCDGSILLDDTSSFKGEKTAAPNNNSVRGYEVIDAIKSKVEAICPGVVSCADIVAITARDSVVILGGPFWKVKVGRRDSRTANFTAANTGVIPAPTSNLTNLISTFKAQGLSAKDMVALSGAHTIGRARCTSFRGHIYNDSNIDSTFAKIRQKNCPRTSGSGDNNLANLDLRTPTHFDNNYFKNLIIKRGLLHSDQVLFNGGTTDSLVKTYSQNEKTFDSDFVAAIIKMGDNKPLTGKQGEIRKNCRSLN