Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22803.t1 | XP_003626559.1 | 91.3 | 335 | 20 | 2 | 1 | 333 | 1 | 328 | 5.80E-166 | 593.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22803.t1 | Q8H0Y8 | 50.2 | 215 | 78 | 9 | 8 | 199 | 7 | 215 | 3.0e-38 | 160.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22803.t1 | G7L427 | 91.3 | 335 | 20 | 2 | 1 | 333 | 1 | 328 | 4.1e-166 | 593.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene22803.t1 | TF | WRKY |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050640 | MS.gene22803 | 0.968744 | 4.09E-129 | -1.69E-46 |
| MS.gene051208 | MS.gene22803 | 0.831187 | 1.92E-55 | -1.69E-46 |
| MS.gene051525 | MS.gene22803 | 0.81328 | 2.77E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene22803 | -0.822923 | 1.83E-53 | -1.69E-46 |
| MS.gene052589 | MS.gene22803 | 0.814797 | 1.28E-51 | -1.69E-46 |
| MS.gene054102 | MS.gene22803 | 0.807189 | 5.71E-50 | -1.69E-46 |
| MS.gene055217 | MS.gene22803 | 0.851372 | 9.26E-61 | -1.69E-46 |
| MS.gene055488 | MS.gene22803 | -0.840701 | 7.42E-58 | -1.69E-46 |
| MS.gene056514 | MS.gene22803 | 0.806155 | 9.44E-50 | -1.69E-46 |
| MS.gene056981 | MS.gene22803 | 0.800605 | 1.33E-48 | -1.69E-46 |
| MS.gene057476 | MS.gene22803 | 0.807086 | 6.00E-50 | -1.69E-46 |
| MS.gene057841 | MS.gene22803 | 0.800963 | 1.13E-48 | -1.69E-46 |
| MS.gene057843 | MS.gene22803 | 0.814202 | 1.74E-51 | -1.69E-46 |
| MS.gene057888 | MS.gene22803 | 0.807312 | 5.38E-50 | -1.69E-46 |
| MS.gene059820 | MS.gene22803 | 0.839667 | 1.38E-57 | -1.69E-46 |
| MS.gene060038 | MS.gene22803 | 0.807491 | 4.93E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22803.t1 | MTR_7g117200 | 91.343 | 335 | 20 | 2 | 1 | 333 | 1 | 328 | 0.0 | 616 |
| MS.gene22803.t1 | MTR_8g027860 | 44.837 | 368 | 141 | 15 | 1 | 329 | 1 | 345 | 2.63e-78 | 243 |
| MS.gene22803.t1 | MTR_8g099350 | 36.413 | 368 | 191 | 10 | 1 | 332 | 1 | 361 | 3.51e-55 | 184 |
| MS.gene22803.t1 | MTR_3g090860 | 53.125 | 192 | 67 | 9 | 12 | 185 | 7 | 193 | 1.73e-53 | 179 |
| MS.gene22803.t1 | MTR_7g073430 | 33.500 | 200 | 108 | 5 | 9 | 198 | 11 | 195 | 5.82e-26 | 105 |
| MS.gene22803.t1 | MTR_7g073380 | 32.275 | 189 | 97 | 5 | 9 | 184 | 12 | 182 | 5.08e-25 | 102 |
| MS.gene22803.t1 | MTR_8g005750 | 36.364 | 176 | 85 | 5 | 15 | 184 | 8 | 162 | 2.36e-24 | 100 |
| MS.gene22803.t1 | MTR_5g067680 | 40.650 | 123 | 59 | 1 | 118 | 240 | 195 | 303 | 4.66e-21 | 92.8 |
| MS.gene22803.t1 | MTR_2g075690 | 30.622 | 209 | 109 | 6 | 11 | 195 | 15 | 211 | 9.45e-21 | 91.3 |
| MS.gene22803.t1 | MTR_0002s1250 | 30.556 | 180 | 96 | 7 | 15 | 184 | 10 | 170 | 2.64e-20 | 89.4 |
| MS.gene22803.t1 | MTR_5g067700 | 31.892 | 185 | 101 | 6 | 7 | 189 | 10 | 171 | 6.12e-20 | 87.4 |
| MS.gene22803.t1 | MTR_3g093830 | 30.570 | 193 | 103 | 5 | 18 | 196 | 23 | 198 | 2.51e-19 | 87.4 |
| MS.gene22803.t1 | MTR_2g075700 | 45.349 | 86 | 37 | 2 | 100 | 184 | 127 | 203 | 7.90e-19 | 85.9 |
| MS.gene22803.t1 | MTR_2g075680 | 45.349 | 86 | 38 | 2 | 99 | 184 | 131 | 207 | 1.34e-17 | 82.4 |
| MS.gene22803.t1 | MTR_2g075750 | 49.180 | 61 | 31 | 0 | 124 | 184 | 27 | 87 | 6.74e-17 | 77.8 |
| MS.gene22803.t1 | MTR_2g075610 | 49.180 | 61 | 31 | 0 | 124 | 184 | 28 | 88 | 9.24e-17 | 77.8 |
| MS.gene22803.t1 | MTR_1g009613 | 43.529 | 85 | 44 | 2 | 98 | 182 | 237 | 317 | 3.32e-16 | 78.6 |
| MS.gene22803.t1 | MTR_7g109600 | 40.870 | 115 | 63 | 3 | 78 | 189 | 3 | 115 | 5.26e-16 | 77.0 |
| MS.gene22803.t1 | MTR_7g028415 | 55.224 | 67 | 25 | 2 | 124 | 190 | 92 | 153 | 1.60e-15 | 73.9 |
| MS.gene22803.t1 | MTR_7g028710 | 55.224 | 67 | 25 | 2 | 124 | 190 | 92 | 153 | 1.60e-15 | 73.9 |
| MS.gene22803.t1 | MTR_7g109800 | 40.594 | 101 | 56 | 2 | 88 | 187 | 107 | 204 | 1.82e-15 | 75.9 |
| MS.gene22803.t1 | MTR_8g028565 | 38.679 | 106 | 59 | 3 | 82 | 187 | 114 | 213 | 4.20e-15 | 75.5 |
| MS.gene22803.t1 | MTR_4g127040 | 32.624 | 141 | 72 | 3 | 42 | 182 | 183 | 300 | 5.11e-15 | 75.1 |
| MS.gene22803.t1 | MTR_8g098945 | 47.297 | 74 | 33 | 3 | 121 | 194 | 125 | 192 | 5.98e-15 | 74.3 |
| MS.gene22803.t1 | MTR_8g087000 | 36.885 | 122 | 65 | 3 | 99 | 215 | 45 | 159 | 9.52e-15 | 73.2 |
| MS.gene22803.t1 | MTR_8g087000 | 39.796 | 98 | 52 | 2 | 118 | 215 | 70 | 160 | 1.04e-14 | 73.2 |
| MS.gene22803.t1 | MTR_8g032510 | 50.000 | 60 | 30 | 0 | 125 | 184 | 119 | 178 | 1.05e-14 | 73.6 |
| MS.gene22803.t1 | MTR_7g079040 | 51.515 | 66 | 26 | 2 | 126 | 191 | 155 | 214 | 3.54e-14 | 72.8 |
| MS.gene22803.t1 | MTR_5g016610 | 54.386 | 57 | 24 | 1 | 126 | 182 | 200 | 254 | 4.36e-14 | 71.6 |
| MS.gene22803.t1 | MTR_2g032030 | 41.748 | 103 | 52 | 4 | 126 | 222 | 268 | 368 | 4.41e-14 | 73.2 |
| MS.gene22803.t1 | MTR_2g032030 | 41.748 | 103 | 52 | 4 | 126 | 222 | 268 | 368 | 6.16e-14 | 72.8 |
| MS.gene22803.t1 | MTR_7g079010 | 45.122 | 82 | 40 | 2 | 124 | 205 | 140 | 216 | 6.92e-14 | 70.1 |
| MS.gene22803.t1 | MTR_2g083870 | 43.750 | 96 | 48 | 3 | 99 | 190 | 50 | 143 | 7.15e-14 | 70.9 |
| MS.gene22803.t1 | MTR_2g016770 | 46.479 | 71 | 32 | 2 | 126 | 196 | 36 | 100 | 9.74e-14 | 69.7 |
| MS.gene22803.t1 | MTR_5g043880 | 52.381 | 63 | 26 | 2 | 124 | 186 | 123 | 181 | 1.01e-13 | 70.9 |
| MS.gene22803.t1 | MTR_8g096730 | 46.269 | 67 | 31 | 2 | 124 | 190 | 69 | 130 | 1.14e-13 | 68.2 |
| MS.gene22803.t1 | MTR_2g016770 | 46.479 | 71 | 32 | 2 | 126 | 196 | 28 | 92 | 1.14e-13 | 69.3 |
| MS.gene22803.t1 | MTR_1g070455 | 52.632 | 57 | 25 | 1 | 126 | 182 | 294 | 348 | 2.89e-13 | 70.1 |
| MS.gene22803.t1 | MTR_4g094908 | 50.877 | 57 | 26 | 1 | 126 | 182 | 267 | 321 | 6.79e-13 | 68.9 |
| MS.gene22803.t1 | MTR_1g086790 | 50.000 | 64 | 27 | 2 | 124 | 187 | 157 | 215 | 7.11e-13 | 68.9 |
| MS.gene22803.t1 | MTR_5g091390 | 49.153 | 59 | 27 | 1 | 124 | 182 | 156 | 211 | 7.48e-13 | 68.6 |
| MS.gene22803.t1 | MTR_4g082580 | 44.118 | 68 | 35 | 1 | 125 | 192 | 145 | 209 | 7.58e-13 | 69.3 |
| MS.gene22803.t1 | MTR_4g082580 | 41.772 | 79 | 43 | 1 | 112 | 190 | 265 | 340 | 2.17e-11 | 64.7 |
| MS.gene22803.t1 | MTR_4g094588 | 47.143 | 70 | 32 | 2 | 124 | 193 | 177 | 241 | 7.59e-13 | 68.9 |
| MS.gene22803.t1 | MTR_3g009470 | 45.714 | 70 | 32 | 3 | 125 | 194 | 280 | 343 | 7.77e-13 | 69.7 |
| MS.gene22803.t1 | MTR_3g009470 | 33.663 | 101 | 59 | 2 | 124 | 219 | 494 | 591 | 7.01e-11 | 63.5 |
| MS.gene22803.t1 | MTR_3g009470 | 45.714 | 70 | 32 | 3 | 125 | 194 | 280 | 343 | 8.89e-13 | 69.3 |
| MS.gene22803.t1 | MTR_3g095080 | 44.444 | 72 | 37 | 1 | 112 | 183 | 155 | 223 | 1.27e-12 | 67.0 |
| MS.gene22803.t1 | MTR_3g095080 | 44.444 | 72 | 37 | 1 | 112 | 183 | 131 | 199 | 1.33e-12 | 66.6 |
| MS.gene22803.t1 | MTR_2g033820 | 48.438 | 64 | 30 | 1 | 124 | 187 | 202 | 262 | 1.39e-12 | 68.2 |
| MS.gene22803.t1 | MTR_8g092140 | 50.000 | 60 | 27 | 1 | 124 | 183 | 159 | 215 | 1.50e-12 | 66.6 |
| MS.gene22803.t1 | MTR_7g011820 | 46.875 | 64 | 30 | 2 | 125 | 188 | 228 | 287 | 1.60e-12 | 68.6 |
| MS.gene22803.t1 | MTR_7g011820 | 44.776 | 67 | 34 | 1 | 124 | 190 | 409 | 472 | 4.16e-12 | 67.4 |
| MS.gene22803.t1 | MTR_5g042920 | 46.269 | 67 | 33 | 1 | 124 | 190 | 319 | 382 | 1.74e-12 | 68.2 |
| MS.gene22803.t1 | MTR_5g042920 | 35.652 | 115 | 65 | 4 | 125 | 239 | 151 | 256 | 6.10e-11 | 63.5 |
| MS.gene22803.t1 | MTR_7g100510 | 31.667 | 120 | 78 | 2 | 126 | 245 | 190 | 305 | 1.96e-12 | 68.2 |
| MS.gene22803.t1 | MTR_1g099600 | 44.928 | 69 | 32 | 2 | 126 | 194 | 186 | 248 | 2.43e-12 | 67.0 |
| MS.gene22803.t1 | MTR_7g062220 | 48.684 | 76 | 31 | 3 | 108 | 182 | 110 | 178 | 2.56e-12 | 67.0 |
| MS.gene22803.t1 | MTR_5g094430 | 44.776 | 67 | 34 | 1 | 124 | 190 | 363 | 426 | 3.12e-12 | 67.8 |
| MS.gene22803.t1 | MTR_5g094430 | 45.833 | 72 | 33 | 3 | 123 | 194 | 198 | 263 | 5.38e-12 | 67.0 |
| MS.gene22803.t1 | MTR_5g073620 | 43.284 | 67 | 38 | 0 | 125 | 191 | 672 | 738 | 3.41e-12 | 67.8 |
| MS.gene22803.t1 | MTR_3g056100 | 47.143 | 70 | 31 | 3 | 125 | 194 | 243 | 306 | 3.89e-12 | 67.4 |
| MS.gene22803.t1 | MTR_3g056100 | 44.776 | 67 | 34 | 1 | 124 | 190 | 401 | 464 | 5.80e-12 | 67.0 |
| MS.gene22803.t1 | MTR_3g108960 | 52.632 | 57 | 25 | 1 | 126 | 182 | 315 | 369 | 4.04e-12 | 67.0 |
| MS.gene22803.t1 | MTR_5g094430 | 44.776 | 67 | 34 | 1 | 124 | 190 | 251 | 314 | 4.18e-12 | 67.0 |
| MS.gene22803.t1 | MTR_5g094430 | 45.833 | 72 | 33 | 3 | 123 | 194 | 86 | 151 | 5.85e-12 | 66.6 |
| MS.gene22803.t1 | MTR_3g056100 | 47.143 | 70 | 31 | 3 | 125 | 194 | 243 | 306 | 4.20e-12 | 67.4 |
| MS.gene22803.t1 | MTR_3g056100 | 44.776 | 67 | 34 | 1 | 124 | 190 | 414 | 477 | 6.37e-12 | 67.0 |
| MS.gene22803.t1 | MTR_5g094430 | 44.776 | 67 | 34 | 1 | 124 | 190 | 229 | 292 | 4.21e-12 | 67.0 |
| MS.gene22803.t1 | MTR_5g094430 | 45.833 | 72 | 33 | 3 | 123 | 194 | 64 | 129 | 6.47e-12 | 66.2 |
| MS.gene22803.t1 | MTR_8g007270 | 45.070 | 71 | 36 | 1 | 112 | 182 | 141 | 208 | 4.98e-12 | 65.1 |
| MS.gene22803.t1 | MTR_3g056100 | 47.143 | 70 | 31 | 3 | 125 | 194 | 99 | 162 | 5.16e-12 | 66.6 |
| MS.gene22803.t1 | MTR_3g056100 | 44.776 | 67 | 34 | 1 | 124 | 190 | 257 | 320 | 8.36e-12 | 66.2 |
| MS.gene22803.t1 | MTR_3g056100 | 47.143 | 70 | 31 | 3 | 125 | 194 | 99 | 162 | 5.26e-12 | 67.0 |
| MS.gene22803.t1 | MTR_3g056100 | 44.776 | 67 | 34 | 1 | 124 | 190 | 270 | 333 | 8.91e-12 | 66.2 |
| MS.gene22803.t1 | MTR_0117s0040 | 52.632 | 57 | 25 | 1 | 126 | 182 | 75 | 129 | 6.05e-12 | 65.1 |
| MS.gene22803.t1 | MTR_7g080020 | 44.615 | 65 | 32 | 2 | 125 | 189 | 280 | 340 | 1.08e-11 | 66.2 |
| MS.gene22803.t1 | MTR_4g122530 | 45.312 | 64 | 32 | 1 | 124 | 187 | 207 | 267 | 1.11e-11 | 65.9 |
| MS.gene22803.t1 | MTR_5g074400 | 44.776 | 67 | 34 | 1 | 124 | 190 | 419 | 482 | 3.94e-11 | 64.3 |
| MS.gene22803.t1 | MTR_2g088000 | 48.485 | 66 | 32 | 1 | 124 | 189 | 348 | 411 | 4.98e-11 | 63.9 |
| MS.gene22803.t1 | MTR_1g015140 | 38.824 | 85 | 45 | 3 | 107 | 189 | 82 | 161 | 8.55e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22803.t1 | AT4G11070 | 38.728 | 346 | 147 | 13 | 3 | 324 | 2 | 306 | 6.97e-51 | 171 |
| MS.gene22803.t1 | AT4G11070 | 37.117 | 326 | 148 | 11 | 3 | 324 | 2 | 274 | 1.79e-46 | 159 |
| MS.gene22803.t1 | AT5G24110 | 37.066 | 259 | 120 | 10 | 12 | 265 | 17 | 237 | 6.78e-43 | 150 |
| MS.gene22803.t1 | AT4G23810 | 42.478 | 226 | 85 | 7 | 11 | 195 | 13 | 234 | 9.61e-43 | 150 |
| MS.gene22803.t1 | AT2G46400 | 37.542 | 301 | 153 | 10 | 12 | 309 | 8 | 276 | 1.08e-40 | 144 |
| MS.gene22803.t1 | AT3G56400 | 32.995 | 197 | 98 | 5 | 3 | 184 | 2 | 179 | 1.33e-26 | 107 |
| MS.gene22803.t1 | AT2G40750 | 27.941 | 272 | 160 | 7 | 5 | 244 | 8 | 275 | 1.38e-23 | 99.8 |
| MS.gene22803.t1 | AT2G40740 | 42.202 | 109 | 61 | 1 | 99 | 205 | 145 | 253 | 2.97e-22 | 95.1 |
| MS.gene22803.t1 | AT2G40740 | 42.202 | 109 | 61 | 1 | 99 | 205 | 154 | 262 | 3.39e-22 | 95.1 |
| MS.gene22803.t1 | AT5G45260 | 47.423 | 97 | 41 | 4 | 99 | 195 | 1188 | 1274 | 8.18e-19 | 88.2 |
| MS.gene22803.t1 | AT1G66550 | 29.282 | 181 | 90 | 6 | 16 | 184 | 13 | 167 | 6.20e-16 | 76.6 |
| MS.gene22803.t1 | AT1G66600 | 40.909 | 88 | 45 | 1 | 104 | 184 | 75 | 162 | 2.61e-15 | 74.7 |
| MS.gene22803.t1 | AT5G52830 | 54.839 | 62 | 26 | 1 | 126 | 187 | 166 | 225 | 3.04e-15 | 76.3 |
| MS.gene22803.t1 | AT1G29280 | 53.226 | 62 | 25 | 2 | 126 | 187 | 75 | 132 | 5.94e-15 | 73.9 |
| MS.gene22803.t1 | AT1G66550 | 38.636 | 88 | 47 | 1 | 104 | 184 | 75 | 162 | 1.24e-14 | 73.2 |
| MS.gene22803.t1 | AT4G31550 | 44.048 | 84 | 43 | 2 | 99 | 182 | 221 | 300 | 1.76e-14 | 73.6 |
| MS.gene22803.t1 | AT5G49520 | 50.000 | 64 | 29 | 1 | 124 | 187 | 220 | 280 | 2.04e-14 | 73.9 |
| MS.gene22803.t1 | AT4G31550 | 54.386 | 57 | 24 | 1 | 126 | 182 | 247 | 301 | 4.77e-14 | 72.4 |
| MS.gene22803.t1 | AT4G01250 | 51.613 | 62 | 26 | 2 | 126 | 187 | 129 | 186 | 8.39e-14 | 71.2 |
| MS.gene22803.t1 | AT2G30590 | 50.794 | 63 | 27 | 2 | 126 | 188 | 314 | 372 | 9.36e-14 | 72.0 |
| MS.gene22803.t1 | AT1G30650 | 49.275 | 69 | 29 | 3 | 126 | 194 | 218 | 280 | 9.48e-14 | 72.0 |
| MS.gene22803.t1 | AT2G34830 | 35.938 | 128 | 58 | 6 | 78 | 187 | 152 | 273 | 1.57e-13 | 71.2 |
| MS.gene22803.t1 | AT1G66560 | 46.667 | 60 | 32 | 0 | 125 | 184 | 103 | 162 | 1.59e-13 | 69.7 |
| MS.gene22803.t1 | AT2G34830 | 35.938 | 128 | 58 | 6 | 78 | 187 | 161 | 282 | 1.72e-13 | 71.2 |
| MS.gene22803.t1 | AT1G69310 | 40.476 | 84 | 47 | 1 | 99 | 182 | 121 | 201 | 4.08e-13 | 69.3 |
| MS.gene22803.t1 | AT1G69310 | 40.476 | 84 | 47 | 1 | 99 | 182 | 121 | 201 | 4.08e-13 | 69.3 |
| MS.gene22803.t1 | AT1G69310 | 40.476 | 84 | 47 | 1 | 99 | 182 | 121 | 201 | 4.08e-13 | 69.3 |
| MS.gene22803.t1 | AT2G24570 | 54.386 | 57 | 24 | 1 | 126 | 182 | 244 | 298 | 4.13e-13 | 69.7 |
| MS.gene22803.t1 | AT2G37260 | 35.345 | 116 | 60 | 3 | 72 | 182 | 218 | 323 | 5.47e-13 | 69.3 |
| MS.gene22803.t1 | AT2G37260 | 35.345 | 116 | 60 | 3 | 72 | 182 | 216 | 321 | 5.62e-13 | 69.3 |
| MS.gene22803.t1 | AT2G37260 | 35.345 | 116 | 60 | 3 | 72 | 182 | 298 | 403 | 6.43e-13 | 69.7 |
| MS.gene22803.t1 | AT5G41570 | 43.038 | 79 | 40 | 2 | 112 | 190 | 85 | 158 | 8.38e-13 | 66.2 |
| MS.gene22803.t1 | AT5G13080 | 51.562 | 64 | 26 | 2 | 124 | 187 | 66 | 124 | 8.75e-13 | 65.5 |
| MS.gene22803.t1 | AT3G58710 | 43.011 | 93 | 45 | 4 | 99 | 187 | 40 | 128 | 8.98e-13 | 68.2 |
| MS.gene22803.t1 | AT4G24240 | 41.667 | 84 | 45 | 2 | 99 | 182 | 257 | 336 | 1.07e-12 | 68.6 |
| MS.gene22803.t1 | AT1G29860 | 40.476 | 84 | 45 | 2 | 110 | 193 | 121 | 199 | 1.09e-12 | 67.8 |
| MS.gene22803.t1 | AT2G23320 | 50.877 | 57 | 26 | 1 | 126 | 182 | 241 | 295 | 1.19e-12 | 68.2 |
| MS.gene22803.t1 | AT1G64000 | 40.659 | 91 | 43 | 3 | 112 | 196 | 101 | 186 | 1.20e-12 | 66.2 |
| MS.gene22803.t1 | AT3G58710 | 50.000 | 62 | 27 | 2 | 126 | 187 | 72 | 129 | 1.39e-12 | 67.4 |
| MS.gene22803.t1 | AT2G47260 | 37.778 | 90 | 53 | 1 | 98 | 187 | 147 | 233 | 1.41e-12 | 68.2 |
| MS.gene22803.t1 | AT2G46130 | 48.438 | 64 | 28 | 2 | 124 | 187 | 29 | 87 | 1.52e-12 | 63.9 |
| MS.gene22803.t1 | AT4G18170 | 35.238 | 105 | 63 | 2 | 83 | 187 | 130 | 229 | 1.59e-12 | 67.8 |
| MS.gene22803.t1 | AT5G28650 | 52.632 | 57 | 25 | 1 | 126 | 182 | 263 | 317 | 1.73e-12 | 67.8 |
| MS.gene22803.t1 | AT4G23550 | 46.774 | 62 | 31 | 1 | 121 | 182 | 136 | 195 | 1.91e-12 | 67.4 |
| MS.gene22803.t1 | AT1G80590 | 39.241 | 79 | 45 | 1 | 112 | 187 | 69 | 147 | 2.77e-12 | 65.9 |
| MS.gene22803.t1 | AT2G44745 | 45.070 | 71 | 36 | 1 | 112 | 182 | 132 | 199 | 4.63e-12 | 65.1 |
| MS.gene22803.t1 | AT5G01900 | 43.750 | 64 | 36 | 0 | 126 | 189 | 111 | 174 | 5.00e-12 | 65.9 |
| MS.gene22803.t1 | AT3G01970 | 48.529 | 68 | 30 | 2 | 124 | 191 | 64 | 126 | 6.05e-12 | 63.2 |
| MS.gene22803.t1 | AT4G26640 | 45.714 | 70 | 32 | 3 | 125 | 194 | 171 | 234 | 6.12e-12 | 67.0 |
| MS.gene22803.t1 | AT4G26640 | 44.776 | 67 | 34 | 1 | 124 | 190 | 340 | 403 | 8.64e-12 | 66.2 |
| MS.gene22803.t1 | AT4G26640 | 45.714 | 70 | 32 | 3 | 125 | 194 | 139 | 202 | 6.76e-12 | 66.6 |
| MS.gene22803.t1 | AT4G26640 | 44.776 | 67 | 34 | 1 | 124 | 190 | 308 | 371 | 1.04e-11 | 66.2 |
| MS.gene22803.t1 | AT4G26640 | 45.714 | 70 | 32 | 3 | 125 | 194 | 211 | 274 | 6.84e-12 | 66.6 |
| MS.gene22803.t1 | AT4G26640 | 44.776 | 67 | 34 | 1 | 124 | 190 | 380 | 443 | 1.06e-11 | 66.2 |
| MS.gene22803.t1 | AT5G46350 | 46.875 | 64 | 29 | 2 | 124 | 187 | 182 | 240 | 7.14e-12 | 65.9 |
| MS.gene22803.t1 | AT4G26640 | 45.070 | 71 | 33 | 3 | 124 | 194 | 34 | 98 | 7.61e-12 | 66.2 |
| MS.gene22803.t1 | AT4G26640 | 44.776 | 67 | 34 | 1 | 124 | 190 | 204 | 267 | 1.17e-11 | 65.5 |
| MS.gene22803.t1 | AT4G26640 | 45.070 | 71 | 33 | 3 | 124 | 194 | 34 | 98 | 7.61e-12 | 66.2 |
| MS.gene22803.t1 | AT4G26640 | 44.776 | 67 | 34 | 1 | 124 | 190 | 204 | 267 | 1.17e-11 | 65.5 |
| MS.gene22803.t1 | AT4G26640 | 45.070 | 71 | 33 | 3 | 124 | 194 | 34 | 98 | 7.61e-12 | 66.2 |
| MS.gene22803.t1 | AT4G26640 | 44.776 | 67 | 34 | 1 | 124 | 190 | 204 | 267 | 1.17e-11 | 65.5 |
| MS.gene22803.t1 | AT4G26640 | 45.070 | 71 | 33 | 3 | 124 | 194 | 34 | 98 | 7.61e-12 | 66.2 |
| MS.gene22803.t1 | AT4G26640 | 44.776 | 67 | 34 | 1 | 124 | 190 | 204 | 267 | 1.17e-11 | 65.5 |
| MS.gene22803.t1 | AT3G01080 | 48.438 | 64 | 29 | 2 | 125 | 188 | 205 | 264 | 8.15e-12 | 65.9 |
| MS.gene22803.t1 | AT3G62340 | 48.438 | 64 | 30 | 1 | 124 | 187 | 117 | 177 | 8.38e-12 | 65.1 |
| MS.gene22803.t1 | AT3G04670 | 50.877 | 57 | 26 | 1 | 126 | 182 | 263 | 317 | 8.55e-12 | 65.9 |
| MS.gene22803.t1 | AT4G26440 | 50.794 | 63 | 27 | 2 | 125 | 187 | 178 | 236 | 9.08e-12 | 66.2 |
| MS.gene22803.t1 | AT4G26440 | 46.269 | 67 | 33 | 1 | 124 | 190 | 371 | 434 | 2.01e-11 | 65.5 |
| MS.gene22803.t1 | AT1G13960 | 46.875 | 64 | 30 | 2 | 125 | 188 | 229 | 288 | 9.60e-12 | 66.2 |
| MS.gene22803.t1 | AT1G13960 | 47.458 | 59 | 28 | 1 | 124 | 182 | 408 | 463 | 1.27e-11 | 65.9 |
| MS.gene22803.t1 | AT2G03340 | 45.455 | 66 | 32 | 2 | 125 | 190 | 250 | 311 | 1.17e-11 | 65.9 |
| MS.gene22803.t1 | AT2G03340 | 43.284 | 67 | 35 | 1 | 124 | 190 | 414 | 477 | 2.39e-11 | 65.1 |
| MS.gene22803.t1 | AT2G25000 | 44.776 | 67 | 35 | 1 | 123 | 189 | 101 | 165 | 1.18e-11 | 63.9 |
| MS.gene22803.t1 | AT2G25000 | 44.776 | 67 | 35 | 1 | 123 | 189 | 101 | 165 | 1.18e-11 | 63.9 |
| MS.gene22803.t1 | AT3G01080 | 46.970 | 66 | 31 | 2 | 125 | 190 | 205 | 266 | 1.19e-11 | 65.9 |
| MS.gene22803.t1 | AT2G25000 | 44.776 | 67 | 35 | 1 | 123 | 189 | 123 | 187 | 1.20e-11 | 64.3 |
| MS.gene22803.t1 | AT2G25000 | 44.776 | 67 | 35 | 1 | 123 | 189 | 144 | 208 | 1.50e-11 | 64.3 |
| MS.gene22803.t1 | AT3G01080 | 46.970 | 66 | 31 | 2 | 125 | 190 | 167 | 228 | 1.52e-11 | 65.5 |
| MS.gene22803.t1 | AT2G04880 | 44.304 | 79 | 36 | 4 | 119 | 197 | 105 | 175 | 1.71e-11 | 65.5 |
| MS.gene22803.t1 | AT2G04880 | 40.299 | 67 | 37 | 1 | 124 | 190 | 282 | 345 | 5.90e-11 | 63.5 |
| MS.gene22803.t1 | AT2G04880 | 44.304 | 79 | 36 | 4 | 119 | 197 | 105 | 175 | 1.77e-11 | 65.5 |
| MS.gene22803.t1 | AT2G04880 | 40.299 | 67 | 37 | 1 | 124 | 190 | 306 | 369 | 7.69e-11 | 63.5 |
| MS.gene22803.t1 | AT1G13960 | 47.458 | 59 | 28 | 1 | 124 | 182 | 255 | 310 | 1.88e-11 | 64.7 |
| MS.gene22803.t1 | AT1G13960 | 46.875 | 64 | 30 | 2 | 125 | 188 | 76 | 135 | 1.90e-11 | 64.7 |
| MS.gene22803.t1 | AT4G39410 | 41.176 | 85 | 46 | 2 | 98 | 182 | 197 | 277 | 3.14e-11 | 63.9 |
| MS.gene22803.t1 | AT4G01720 | 37.963 | 108 | 60 | 4 | 81 | 187 | 196 | 297 | 4.09e-11 | 64.3 |
| MS.gene22803.t1 | AT5G45050 | 42.500 | 80 | 40 | 3 | 108 | 187 | 1026 | 1099 | 4.68e-11 | 64.7 |
| MS.gene22803.t1 | AT5G45050 | 42.500 | 80 | 40 | 3 | 108 | 187 | 1137 | 1210 | 4.75e-11 | 64.7 |
| MS.gene22803.t1 | AT5G45050 | 42.500 | 80 | 40 | 3 | 108 | 187 | 1165 | 1238 | 4.81e-11 | 64.7 |
| MS.gene22803.t1 | AT5G07100 | 47.458 | 59 | 28 | 1 | 124 | 182 | 233 | 288 | 5.46e-11 | 63.2 |
| MS.gene22803.t1 | AT5G07100 | 42.857 | 70 | 35 | 2 | 125 | 194 | 117 | 181 | 9.00e-11 | 62.4 |
| MS.gene22803.t1 | AT5G07100 | 47.458 | 59 | 28 | 1 | 124 | 182 | 140 | 195 | 6.60e-11 | 61.6 |
| MS.gene22803.t1 | AT5G07100 | 42.857 | 70 | 35 | 2 | 125 | 194 | 24 | 88 | 8.88e-11 | 61.2 |
| MS.gene22803.t1 | AT5G07100 | 47.458 | 59 | 28 | 1 | 124 | 182 | 140 | 195 | 6.60e-11 | 61.6 |
| MS.gene22803.t1 | AT5G07100 | 42.857 | 70 | 35 | 2 | 125 | 194 | 24 | 88 | 8.88e-11 | 61.2 |
| MS.gene22803.t1 | AT5G07100 | 47.458 | 59 | 28 | 1 | 124 | 182 | 140 | 195 | 6.60e-11 | 61.6 |
| MS.gene22803.t1 | AT5G07100 | 42.857 | 70 | 35 | 2 | 125 | 194 | 24 | 88 | 8.88e-11 | 61.2 |
| MS.gene22803.t1 | AT5G07100 | 47.458 | 59 | 28 | 1 | 124 | 182 | 140 | 195 | 6.60e-11 | 61.6 |
| MS.gene22803.t1 | AT5G07100 | 42.857 | 70 | 35 | 2 | 125 | 194 | 24 | 88 | 8.88e-11 | 61.2 |
| MS.gene22803.t1 | AT2G21900 | 40.299 | 67 | 37 | 1 | 123 | 189 | 107 | 170 | 7.40e-11 | 61.2 |
| MS.gene22803.t1 | AT2G40740 | 45.902 | 61 | 33 | 0 | 145 | 205 | 149 | 209 | 8.15e-11 | 62.0 |
| MS.gene22803.t1 | AT5G43290 | 40.541 | 111 | 50 | 5 | 120 | 224 | 109 | 209 | 9.62e-11 | 62.0 |
Find 69 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTATGATGACCTCACTTT+TGG | 0.188414 | 7.4:-1256319 | None:intergenic |
| TCAACATAGTAAGTGCTTTC+TGG | 0.207919 | 7.4:-1256221 | None:intergenic |
| TCCCTCAAAGTTAAAGATAA+AGG | 0.227041 | 7.4:+1257498 | MS.gene22803:CDS |
| CTCAAGCTAAGCCTTTAAAA+AGG | 0.231958 | 7.4:+1257470 | MS.gene22803:CDS |
| ATTCTGAAGTTGGTCCATTT+TGG | 0.232813 | 7.4:-1257756 | None:intergenic |
| CAAGAATTCATTGGTTTCAT+TGG | 0.239108 | 7.4:-1256175 | None:intergenic |
| TTCACTTGTTCCTTCCATTT+AGG | 0.269402 | 7.4:-1256673 | None:intergenic |
| CAATTCACCAATCCTTGATT+TGG | 0.271018 | 7.4:+1257819 | MS.gene22803:CDS |
| CATTGGATGATATAATTATA+TGG | 0.275590 | 7.4:-1256158 | None:intergenic |
| AGGATTATCTGAAGGGTCTT+TGG | 0.285031 | 7.4:+1256711 | MS.gene22803:CDS |
| CCGAGGGAAAATACCCTCTT+TGG | 0.291656 | 7.4:-1257632 | None:intergenic |
| CTTTCCTTGGATTAATTCAT+TGG | 0.302740 | 7.4:-1256112 | None:intergenic |
| CAAATCAAGGATTGGTGAAT+TGG | 0.310097 | 7.4:-1257818 | None:intergenic |
| CCCTCAAAGTTAAAGATAAA+GGG | 0.333691 | 7.4:+1257499 | MS.gene22803:CDS |
| CCCTTTATCTTTAACTTTGA+GGG | 0.337711 | 7.4:-1257499 | None:intergenic |
| GCAGAAAGAGCATGCCTAAA+TGG | 0.338464 | 7.4:+1256659 | MS.gene22803:intron |
| TATGGTCAAAAGGATATTCT+TGG | 0.360560 | 7.4:+1256757 | MS.gene22803:CDS |
| GAATATAGCTGGAGAAAATA+TGG | 0.367378 | 7.4:+1256739 | MS.gene22803:CDS |
| GCCCTTTATCTTTAACTTTG+AGG | 0.367772 | 7.4:-1257500 | None:intergenic |
| TTTGAACCTGCTTTGTTGCT+AGG | 0.370195 | 7.4:-1257384 | None:intergenic |
| TAAGTTACCTCAATTATTGT+TGG | 0.376442 | 7.4:-1257421 | None:intergenic |
| TGCAATGGATTATGCCAAAA+TGG | 0.376964 | 7.4:+1257742 | MS.gene22803:CDS |
| TTTGTCAATCAAGAATTCAT+TGG | 0.407531 | 7.4:-1256184 | None:intergenic |
| GCTTTGCTAACTCCTTTCCT+TGG | 0.408135 | 7.4:-1256125 | None:intergenic |
| GGACTCTCGTTTGTAAAAGA+AGG | 0.431784 | 7.4:-1256297 | None:intergenic |
| TGGTTTGTCAGAATATCAAT+TGG | 0.434536 | 7.4:+1257717 | MS.gene22803:CDS |
| GTGATATCAGATTCTGAAGT+TGG | 0.434696 | 7.4:-1257766 | None:intergenic |
| TACAGATGCACACATAGAAA+TGG | 0.436912 | 7.4:+1257352 | MS.gene22803:CDS |
| GAAGCAAGATATCCAAATCA+AGG | 0.449238 | 7.4:-1257831 | None:intergenic |
| TTTAACATCAAGTTCTGCCT+TGG | 0.466903 | 7.4:-1257590 | None:intergenic |
| GGTGAATTGGTGACTGAAGT+TGG | 0.470985 | 7.4:-1257805 | None:intergenic |
| CTGGAGAAAATATGGTCAAA+AGG | 0.471109 | 7.4:+1256747 | MS.gene22803:CDS |
| GGAGAGACTAAGACCATTGA+TGG | 0.480847 | 7.4:+1256255 | MS.gene22803:CDS |
| GGTTTGTCAGAATATCAATT+GGG | 0.483451 | 7.4:+1257718 | MS.gene22803:CDS |
| GACCATTGATGGTAAAATGA+AGG | 0.490394 | 7.4:+1256266 | MS.gene22803:CDS |
| TCTGATTCAATTGATGGAGA+AGG | 0.500124 | 7.4:-1257664 | None:intergenic |
| ACAATGCTCTCTTCAAGAAA+AGG | 0.501466 | 7.4:+1256355 | MS.gene22803:CDS |
| GAATATCAATTGGGCTGCAA+TGG | 0.511266 | 7.4:+1257727 | MS.gene22803:CDS |
| CTTTGGATGATGAATATAGC+TGG | 0.515960 | 7.4:+1256728 | MS.gene22803:CDS |
| ATCAGAAAATGAGATAATGA+TGG | 0.516212 | 7.4:+1257681 | MS.gene22803:CDS |
| AAGATATCCAAATCAAGGAT+TGG | 0.520860 | 7.4:-1257826 | None:intergenic |
| TGGATATCTTGCTTCAAAGA+GGG | 0.528389 | 7.4:+1257839 | MS.gene22803:CDS |
| GAGCATTGTGGTTAAACTCC+TGG | 0.533299 | 7.4:-1256341 | None:intergenic |
| TGAAGATCCAACAATAATTG+AGG | 0.540253 | 7.4:+1257414 | MS.gene22803:CDS |
| AGAGACTAGTTTCACTTCCA+AGG | 0.541625 | 7.4:+1257573 | MS.gene22803:CDS |
| GGATATCTTGCTTCAAAGAG+GGG | 0.560641 | 7.4:+1257840 | MS.gene22803:CDS |
| TAGCAACAAAGCAGGTTCAA+AGG | 0.565187 | 7.4:+1257386 | MS.gene22803:CDS |
| AAATATTCAGGAGTATTGAG+AGG | 0.566440 | 7.4:-1257880 | None:intergenic |
| CATAGTAAGTGCTTTCTGGT+AGG | 0.575281 | 7.4:-1256217 | None:intergenic |
| TTGGATATCTTGCTTCAAAG+AGG | 0.575611 | 7.4:+1257838 | MS.gene22803:CDS |
| CAATGAATTAATCCAAGGAA+AGG | 0.585373 | 7.4:+1256113 | MS.gene22803:CDS |
| CTTACTATGTTGAATGTGAG+AGG | 0.591736 | 7.4:+1256231 | MS.gene22803:CDS |
| AATATTCAGGAGTATTGAGA+GGG | 0.594267 | 7.4:-1257879 | None:intergenic |
| AAAGAGCATGCCTAAATGGA+AGG | 0.601574 | 7.4:+1256663 | MS.gene22803:CDS |
| GTGAAGATTTGCACAAACAC+AGG | 0.602509 | 7.4:+1256691 | MS.gene22803:CDS |
| ATAACCAATGAATTAATCCA+AGG | 0.604601 | 7.4:+1256108 | MS.gene22803:CDS |
| GAGAAGGAAAACAAAACCGA+GGG | 0.610739 | 7.4:-1257648 | None:intergenic |
| AGGGTGCCTAGCAACAAAGC+AGG | 0.623925 | 7.4:+1257378 | MS.gene22803:CDS |
| ACAAACACAGGATTATCTGA+AGG | 0.625241 | 7.4:+1256703 | MS.gene22803:CDS |
| AAGTGAGGTCATCATAGACC+AGG | 0.627405 | 7.4:+1256323 | MS.gene22803:CDS |
| CAAACACAGGATTATCTGAA+GGG | 0.645284 | 7.4:+1256704 | MS.gene22803:CDS |
| AAACGAGAGTCCCAAAAGTG+AGG | 0.654222 | 7.4:+1256308 | MS.gene22803:CDS |
| ATAATTGAGGTAACTTACAG+AGG | 0.655185 | 7.4:+1257427 | MS.gene22803:CDS |
| GACTTAGAAGAAACCAAAGA+GGG | 0.656480 | 7.4:+1257619 | MS.gene22803:CDS |
| GGAGAAGGAAAACAAAACCG+AGG | 0.666774 | 7.4:-1257649 | None:intergenic |
| ACTATGTTGAATGTGAGAGG+AGG | 0.670945 | 7.4:+1256234 | MS.gene22803:CDS |
| TGACTTAGAAGAAACCAAAG+AGG | 0.672282 | 7.4:+1257618 | MS.gene22803:CDS |
| TGCACACATAGAAATGGACA+AGG | 0.697085 | 7.4:+1257358 | MS.gene22803:CDS |
| GCACACATAGAAATGGACAA+GGG | 0.758330 | 7.4:+1257359 | MS.gene22803:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTTTTTGTTAAATATTTA+AGG | + | chr7.4:1257032-1257051 | MS.gene22803:intron | 10.0% |
| !!! | ATTAATAATATTTGTTTTAG+TGG | + | chr7.4:1256857-1256876 | MS.gene22803:intron | 10.0% |
| !! | AAATGATACTTGTAATAAAA+CGG | + | chr7.4:1256528-1256547 | MS.gene22803:intron | 15.0% |
| !! | CTATGTTAATAAAAAAGTTA+AGG | - | chr7.4:1256454-1256473 | None:intergenic | 15.0% |
| !!! | AAATGTTTTCACAATTTTAT+TGG | + | chr7.4:1257310-1257329 | MS.gene22803:intron | 15.0% |
| !! | CATTGGATGATATAATTATA+TGG | - | chr7.4:1256161-1256180 | None:intergenic | 20.0% |
| !! | TATGTAATCATTTGAATTTG+TGG | + | chr7.4:1256635-1256654 | MS.gene22803:intron | 20.0% |
| !!! | ATATTGCTCAACTATTTTTT+TGG | + | chr7.4:1256993-1257012 | MS.gene22803:intron | 20.0% |
| !!! | TGCACTATTTGTTAATAATA+AGG | + | chr7.4:1257102-1257121 | MS.gene22803:intron | 20.0% |
| !!! | TTCAACATTTGTATTGTTTT+CGG | + | chr7.4:1257201-1257220 | MS.gene22803:intron | 20.0% |
| !!! | TTTTCACAATTTTATTGGTT+TGG | + | chr7.4:1257315-1257334 | MS.gene22803:intron | 20.0% |
| ! | ATAACCAATGAATTAATCCA+AGG | + | chr7.4:1256108-1256127 | MS.gene22803:CDS | 25.0% |
| ! | ATCAGAAAATGAGATAATGA+TGG | + | chr7.4:1257681-1257700 | MS.gene22803:CDS | 25.0% |
| ! | ATCTTGAGTAATGAAATAGA+AGG | - | chr7.4:1257081-1257100 | None:intergenic | 25.0% |
| ! | TAAGTTACCTCAATTATTGT+TGG | - | chr7.4:1257424-1257443 | None:intergenic | 25.0% |
| ! | TTTGTCAATCAAGAATTCAT+TGG | - | chr7.4:1256187-1256206 | None:intergenic | 25.0% |
| !! | ATAGTTGAGCAATATTGATT+TGG | - | chr7.4:1256988-1257007 | None:intergenic | 25.0% |
| !! | TCATTTTCTGATTCAATTGA+TGG | - | chr7.4:1257673-1257692 | None:intergenic | 25.0% |
| !!! | AAGCGTTTTGAATTTGATAT+AGG | + | chr7.4:1256895-1256914 | MS.gene22803:intron | 25.0% |
| !!! | ATGATGGAATCAAACTTTTT+TGG | + | chr7.4:1257697-1257716 | MS.gene22803:CDS | 25.0% |
| !!! | CAATATTGATTTGGTTAACA+GGG | - | chr7.4:1256979-1256998 | None:intergenic | 25.0% |
| AAGATATCCAAATCAAGGAT+TGG | - | chr7.4:1257829-1257848 | None:intergenic | 30.0% | |
| ATAATTGAGGTAACTTACAG+AGG | + | chr7.4:1257427-1257446 | MS.gene22803:CDS | 30.0% | |
| CAATGAATTAATCCAAGGAA+AGG | + | chr7.4:1256113-1256132 | MS.gene22803:CDS | 30.0% | |
| CCCTCAAAGTTAAAGATAAA+GGG | + | chr7.4:1257499-1257518 | MS.gene22803:CDS | 30.0% | |
| CTTTCCTTGGATTAATTCAT+TGG | - | chr7.4:1256115-1256134 | None:intergenic | 30.0% | |
| GAATATAGCTGGAGAAAATA+TGG | + | chr7.4:1256739-1256758 | MS.gene22803:CDS | 30.0% | |
| GGTTTGTCAGAATATCAATT+GGG | + | chr7.4:1257718-1257737 | MS.gene22803:CDS | 30.0% | |
| TATGGTCAAAAGGATATTCT+TGG | + | chr7.4:1256757-1256776 | MS.gene22803:CDS | 30.0% | |
| TCCCTCAAAGTTAAAGATAA+AGG | + | chr7.4:1257498-1257517 | MS.gene22803:CDS | 30.0% | |
| TGAAGATCCAACAATAATTG+AGG | + | chr7.4:1257414-1257433 | MS.gene22803:CDS | 30.0% | |
| ! | AGAAGACAAAGTGCTTATTA+AGG | + | chr7.4:1257151-1257170 | MS.gene22803:intron | 30.0% |
| ! | ATCCTTCATTTTACCATCAA+TGG | - | chr7.4:1256271-1256290 | None:intergenic | 30.0% |
| ! | CCCTTTATCTTTAACTTTGA+GGG | - | chr7.4:1257502-1257521 | None:intergenic | 30.0% |
| ! | TCAAGCTAAGCCTTTAAAAA+GGG | + | chr7.4:1257471-1257490 | MS.gene22803:CDS | 30.0% |
| ! | TGGTTTGTCAGAATATCAAT+TGG | + | chr7.4:1257717-1257736 | MS.gene22803:CDS | 30.0% |
| !! | AAATATTCAGGAGTATTGAG+AGG | - | chr7.4:1257883-1257902 | None:intergenic | 30.0% |
| !! | AATATTCAGGAGTATTGAGA+GGG | - | chr7.4:1257882-1257901 | None:intergenic | 30.0% |
| !! | CAAGAATTCATTGGTTTCAT+TGG | - | chr7.4:1256178-1256197 | None:intergenic | 30.0% |
| !! | GCAATATTGATTTGGTTAAC+AGG | - | chr7.4:1256980-1256999 | None:intergenic | 30.0% |
| ACAAACACAGGATTATCTGA+AGG | + | chr7.4:1256703-1256722 | MS.gene22803:CDS | 35.0% | |
| ACAATGCTCTCTTCAAGAAA+AGG | + | chr7.4:1256355-1256374 | MS.gene22803:CDS | 35.0% | |
| ACTGAAATACGTTCAAGCTA+GGG | - | chr7.4:1256616-1256635 | None:intergenic | 35.0% | |
| CAAACACAGGATTATCTGAA+GGG | + | chr7.4:1256704-1256723 | MS.gene22803:CDS | 35.0% | |
| CAATTCACCAATCCTTGATT+TGG | + | chr7.4:1257819-1257838 | MS.gene22803:CDS | 35.0% | |
| CTGGAGAAAATATGGTCAAA+AGG | + | chr7.4:1256747-1256766 | MS.gene22803:CDS | 35.0% | |
| CTTACTATGTTGAATGTGAG+AGG | + | chr7.4:1256231-1256250 | MS.gene22803:CDS | 35.0% | |
| CTTTGGATGATGAATATAGC+TGG | + | chr7.4:1256728-1256747 | MS.gene22803:CDS | 35.0% | |
| GAAGCAAGATATCCAAATCA+AGG | - | chr7.4:1257834-1257853 | None:intergenic | 35.0% | |
| GACTTAGAAGAAACCAAAGA+GGG | + | chr7.4:1257619-1257638 | MS.gene22803:CDS | 35.0% | |
| TACAGATGCACACATAGAAA+TGG | + | chr7.4:1257352-1257371 | MS.gene22803:CDS | 35.0% | |
| TACTGAAATACGTTCAAGCT+AGG | - | chr7.4:1256617-1256636 | None:intergenic | 35.0% | |
| TCAACATAGTAAGTGCTTTC+TGG | - | chr7.4:1256224-1256243 | None:intergenic | 35.0% | |
| TCTGATTCAATTGATGGAGA+AGG | - | chr7.4:1257667-1257686 | None:intergenic | 35.0% | |
| TGACTTAGAAGAAACCAAAG+AGG | + | chr7.4:1257618-1257637 | MS.gene22803:CDS | 35.0% | |
| TGGATATCTTGCTTCAAAGA+GGG | + | chr7.4:1257839-1257858 | MS.gene22803:CDS | 35.0% | |
| TTCACTTGTTCCTTCCATTT+AGG | - | chr7.4:1256676-1256695 | None:intergenic | 35.0% | |
| TTCATGTGTGTGAATTGTCA+AGG | + | chr7.4:1256584-1256603 | MS.gene22803:intron | 35.0% | |
| TTGGATATCTTGCTTCAAAG+AGG | + | chr7.4:1257838-1257857 | MS.gene22803:CDS | 35.0% | |
| TTTAACATCAAGTTCTGCCT+TGG | - | chr7.4:1257593-1257612 | None:intergenic | 35.0% | |
| ! | CAAATCAAGGATTGGTGAAT+TGG | - | chr7.4:1257821-1257840 | None:intergenic | 35.0% |
| ! | CTCAAGCTAAGCCTTTAAAA+AGG | + | chr7.4:1257470-1257489 | MS.gene22803:CDS | 35.0% |
| ! | GACCATTGATGGTAAAATGA+AGG | + | chr7.4:1256266-1256285 | MS.gene22803:CDS | 35.0% |
| ! | GAGGGAAATTCCCTTTTTAA+AGG | - | chr7.4:1257484-1257503 | None:intergenic | 35.0% |
| ! | GCCCTTTATCTTTAACTTTG+AGG | - | chr7.4:1257503-1257522 | None:intergenic | 35.0% |
| ! | TTCTTGGAGCTAAGTTTTCA+AGG | + | chr7.4:1256773-1256792 | MS.gene22803:CDS | 35.0% |
| !! | CTTTTTAAAGGCTTAGCTTG+AGG | - | chr7.4:1257472-1257491 | None:intergenic | 35.0% |
| !! | GTGATATCAGATTCTGAAGT+TGG | - | chr7.4:1257769-1257788 | None:intergenic | 35.0% |
| !! | TCTATGATGACCTCACTTTT+GGG | - | chr7.4:1256321-1256340 | None:intergenic | 35.0% |
| !! | TGCAATGGATTATGCCAAAA+TGG | + | chr7.4:1257742-1257761 | MS.gene22803:CDS | 35.0% |
| !! | TTTATTGGTTTGGATTGCAG+AGG | + | chr7.4:1257325-1257344 | MS.gene22803:intron | 35.0% |
| !!! | ATTCTGAAGTTGGTCCATTT+TGG | - | chr7.4:1257759-1257778 | None:intergenic | 35.0% |
| !!! | TTTTCTTGAAGAGAGCATTG+TGG | - | chr7.4:1256356-1256375 | None:intergenic | 35.0% |
| ACTATGTTGAATGTGAGAGG+AGG | + | chr7.4:1256234-1256253 | MS.gene22803:CDS | 40.0% | |
| AGGATTATCTGAAGGGTCTT+TGG | + | chr7.4:1256711-1256730 | MS.gene22803:CDS | 40.0% | |
| GAATATCAATTGGGCTGCAA+TGG | + | chr7.4:1257727-1257746 | MS.gene22803:CDS | 40.0% | |
| GAGAAGGAAAACAAAACCGA+GGG | - | chr7.4:1257651-1257670 | None:intergenic | 40.0% | |
| GCACACATAGAAATGGACAA+GGG | + | chr7.4:1257359-1257378 | MS.gene22803:CDS | 40.0% | |
| GGACTCTCGTTTGTAAAAGA+AGG | - | chr7.4:1256300-1256319 | None:intergenic | 40.0% | |
| GGATATCTTGCTTCAAAGAG+GGG | + | chr7.4:1257840-1257859 | MS.gene22803:CDS | 40.0% | |
| GGTTAACAGGGCTAAAAACA+GGG | - | chr7.4:1256967-1256986 | None:intergenic | 40.0% | |
| GTGAAGATTTGCACAAACAC+AGG | + | chr7.4:1256691-1256710 | MS.gene22803:CDS | 40.0% | |
| TAGCAACAAAGCAGGTTCAA+AGG | + | chr7.4:1257386-1257405 | MS.gene22803:CDS | 40.0% | |
| TGCACACATAGAAATGGACA+AGG | + | chr7.4:1257358-1257377 | MS.gene22803:CDS | 40.0% | |
| TGGTTAACAGGGCTAAAAAC+AGG | - | chr7.4:1256968-1256987 | None:intergenic | 40.0% | |
| TGTAAGCATCTTAGTGTCAC+AGG | + | chr7.4:1256925-1256944 | MS.gene22803:intron | 40.0% | |
| TGTGTGAATTGTCAAGGTCA+AGG | + | chr7.4:1256590-1256609 | MS.gene22803:intron | 40.0% | |
| ! | AAAGAGCATGCCTAAATGGA+AGG | + | chr7.4:1256663-1256682 | MS.gene22803:CDS | 40.0% |
| ! | CATAGTAAGTGCTTTCTGGT+AGG | - | chr7.4:1256220-1256239 | None:intergenic | 40.0% |
| ! | GTCTATGATGACCTCACTTT+TGG | - | chr7.4:1256322-1256341 | None:intergenic | 40.0% |
| ! | TTTGAACCTGCTTTGTTGCT+AGG | - | chr7.4:1257387-1257406 | None:intergenic | 40.0% |
| !! | AGAGACTAGTTTCACTTCCA+AGG | + | chr7.4:1257573-1257592 | MS.gene22803:CDS | 40.0% |
| AAACGAGAGTCCCAAAAGTG+AGG | + | chr7.4:1256308-1256327 | MS.gene22803:CDS | 45.0% | |
| AAGTGAGGTCATCATAGACC+AGG | + | chr7.4:1256323-1256342 | MS.gene22803:CDS | 45.0% | |
| GCTTTGCTAACTCCTTTCCT+TGG | - | chr7.4:1256128-1256147 | None:intergenic | 45.0% | |
| GGAGAAGGAAAACAAAACCG+AGG | - | chr7.4:1257652-1257671 | None:intergenic | 45.0% | |
| GGAGAGACTAAGACCATTGA+TGG | + | chr7.4:1256255-1256274 | MS.gene22803:CDS | 45.0% | |
| ! | GAGCATTGTGGTTAAACTCC+TGG | - | chr7.4:1256344-1256363 | None:intergenic | 45.0% |
| ! | GCAGAAAGAGCATGCCTAAA+TGG | + | chr7.4:1256659-1256678 | MS.gene22803:intron | 45.0% |
| ! | GGTGAATTGGTGACTGAAGT+TGG | - | chr7.4:1257808-1257827 | None:intergenic | 45.0% |
| !!! | CCAAAGAGGGTATTTTCCCT+CGG | + | chr7.4:1257632-1257651 | MS.gene22803:CDS | 45.0% |
| CCGAGGGAAAATACCCTCTT+TGG | - | chr7.4:1257635-1257654 | None:intergenic | 50.0% | |
| ! | AGGGTGCCTAGCAACAAAGC+AGG | + | chr7.4:1257378-1257397 | MS.gene22803:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 1256075 | 1257912 | 1256075 | ID=MS.gene22803 |
| chr7.4 | mRNA | 1256075 | 1257912 | 1256075 | ID=MS.gene22803.t1;Parent=MS.gene22803 |
| chr7.4 | exon | 1256075 | 1256376 | 1256075 | ID=MS.gene22803.t1.exon1;Parent=MS.gene22803.t1 |
| chr7.4 | CDS | 1256075 | 1256376 | 1256075 | ID=cds.MS.gene22803.t1;Parent=MS.gene22803.t1 |
| chr7.4 | exon | 1256663 | 1256794 | 1256663 | ID=MS.gene22803.t1.exon2;Parent=MS.gene22803.t1 |
| chr7.4 | CDS | 1256663 | 1256794 | 1256663 | ID=cds.MS.gene22803.t1;Parent=MS.gene22803.t1 |
| chr7.4 | exon | 1257345 | 1257912 | 1257345 | ID=MS.gene22803.t1.exon3;Parent=MS.gene22803.t1 |
| chr7.4 | CDS | 1257345 | 1257912 | 1257345 | ID=cds.MS.gene22803.t1;Parent=MS.gene22803.t1 |
| Gene Sequence |
| Protein sequence |
