AlfalfaGEDB | MS.gene056981

M. sativa cultivar XinJiangDaYe / MS.gene056981

KEGG: K01183
GO: GO:0003674 GO:0003824 GO:0004553 GO:0004568 GO:0005488 GO:0005975 GO:0006022 GO:0006026 GO:0006030 GO:0006032 GO:0006040 GO:0006807 GO:0008061 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0016787 GO:0016798 GO:0016998 GO:0017144 GO:0042737 GO:0043170 GO:0044036 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0046348 GO:0071704 GO:0097367 GO:1901071 GO:1901072 GO:1901135 GO:1901136 GO:1901564 GO:1901565 GO:1901575
PFAM: PF00182.22 PF00187.22

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056981.t1	XP_024632584.1	91.5	260	21	1	16	274	19	278	1.80E-128	468.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056981.t1	P27054	73.7	270	64	3	6	274	7	270	5.8e-104	378.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056981.t1	G7IS19	84.2	272	41	1	3	274	13	282	2.0e-126	461.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050640	MS.gene056981	0.803041	4.21E-49	-1.69E-46
MS.gene051980	MS.gene056981	0.955746	1.49E-113	-1.69E-46
MS.gene052589	MS.gene056981	0.81443	1.55E-51	-1.69E-46
MS.gene056981	MS.gene057843	0.811604	6.44E-51	-1.69E-46
MS.gene056981	MS.gene070515	0.800979	1.12E-48	-1.69E-46
MS.gene056981	MS.gene070915	0.824705	6.99E-54	-1.69E-46
MS.gene056981	MS.gene071153	0.80425	2.36E-49	-1.69E-46
MS.gene056981	MS.gene09432	0.813956	1.97E-51	-1.69E-46
MS.gene056981	MS.gene21665	0.804739	1.87E-49	-1.69E-46
MS.gene056981	MS.gene22803	0.800605	1.33E-48	-1.69E-46
MS.gene056981	MS.gene23771	0.807222	5.62E-50	-1.69E-46
MS.gene056981	MS.gene25738	0.804286	2.32E-49	-1.69E-46
MS.gene056981	MS.gene28687	0.827362	1.63E-54	-1.69E-46
MS.gene056981	MS.gene28690	0.840717	7.35E-58	-1.69E-46
MS.gene056981	MS.gene29623	0.829731	4.37E-55	-1.69E-46
MS.gene056981	MS.gene31794	0.802153	6.42E-49	-1.69E-46
MS.gene056981	MS.gene33262	0.825173	5.42E-54	-1.69E-46
MS.gene056981	MS.gene40080	0.803592	3.24E-49	-1.69E-46
MS.gene056981	MS.gene43149	0.807982	3.87E-50	-1.69E-46
MS.gene056981	MS.gene43997	0.826874	2.13E-54	-1.69E-46
MS.gene056981	MS.gene44521	0.816969	4.20E-52	-1.69E-46
MS.gene056981	MS.gene44667	0.800621	1.32E-48	-1.69E-46
MS.gene056981	MS.gene44673	0.811843	5.72E-51	-1.69E-46
MS.gene056981	MS.gene44674	0.815615	8.44E-52	-1.69E-46
MS.gene056981	MS.gene44677	0.808345	3.24E-50	-1.69E-46
MS.gene056981	MS.gene48558	0.810367	1.19E-50	-1.69E-46
MS.gene056981	MS.gene49992	0.808569	2.90E-50	-1.69E-46
MS.gene056981	MS.gene53849	0.803492	3.40E-49	-1.69E-46
MS.gene056981	MS.gene56006	0.805751	1.15E-49	-1.69E-46
MS.gene056981	MS.gene57287	0.811186	7.94E-51	-1.69E-46
MS.gene056981	MS.gene59701	0.804079	2.57E-49	-1.69E-46
MS.gene056981	MS.gene65284	0.807518	4.86E-50	-1.69E-46
MS.gene056981	MS.gene66548	0.80206	6.71E-49	-1.69E-46
MS.gene056981	MS.gene69942	0.80655	7.79E-50	-1.69E-46
MS.gene056981	MS.gene70827	0.83462	2.70E-56	-1.69E-46
MS.gene056981	MS.gene72187	0.806107	9.66E-50	-1.69E-46
MS.gene056981	MS.gene80929	0.818793	1.63E-52	-1.69E-46
MS.gene056981	MS.gene81581	0.823534	1.32E-53	-1.69E-46
MS.gene056981	MS.gene81589	0.800024	1.75E-48	-1.69E-46
MS.gene056981	MS.gene86331	0.820122	8.10E-53	-1.69E-46
MS.gene056981	MS.gene98800	0.816959	4.23E-52	-1.69E-46
MS.gene056981	MS.gene98801	0.809027	2.32E-50	-1.69E-46
MS.gene056981	MS.gene98803	0.800688	1.28E-48	-1.69E-46
MS.gene056981	MS.gene98807	0.804488	2.11E-49	-1.69E-46
MS.gene056981	MS.gene98808	0.824531	7.68E-54	-1.69E-46
MS.gene056981	MS.gene98809	0.816965	4.21E-52	-1.69E-46
MS.gene056981	MS.gene98810	0.8082	3.48E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056981.t1	MTR_2g099470	84.307	274	41	1	1	274	11	282	2.43e-177	489
MS.gene056981.t1	MTR_2g099465	91.228	228	19	1	48	274	27	254	4.23e-157	437
MS.gene056981.t1	MTR_3g118390	36.392	316	145	9	1	274	59	360	8.29e-60	194
MS.gene056981.t1	MTR_8g074350	35.873	315	156	8	2	274	3	313	3.91e-58	188
MS.gene056981.t1	MTR_8g074330	38.384	297	138	7	20	274	20	313	4.54e-56	183
MS.gene056981.t1	MTR_7g110780	37.238	239	114	5	71	274	34	271	4.44e-50	166
MS.gene056981.t1	MTR_8g074335	37.370	289	141	9	20	274	20	302	3.92e-46	157
MS.gene056981.t1	MTR_2g099450	65.000	120	13	2	154	273	84	174	3.90e-42	142
MS.gene056981.t1	MTR_2g099450	78.873	71	13	1	1	71	11	79	1.42e-31	115
MS.gene056981.t1	MTR_2g034680	29.876	241	124	9	78	274	62	301	1.35e-22	95.1
MS.gene056981.t1	MTR_1g105535	26.104	249	139	8	70	274	60	307	1.15e-18	84.3
MS.gene056981.t1	MTR_7g021640	26.104	249	139	8	70	274	57	304	6.81e-18	82.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056981.t1	AT3G54420	69.630	270	75	1	5	274	11	273	2.84e-140	395
MS.gene056981.t1	AT2G43590	55.385	260	104	3	15	274	17	264	6.40e-103	301
MS.gene056981.t1	AT2G43580	54.440	259	105	4	17	274	19	265	5.24e-99	291
MS.gene056981.t1	AT2G43610	48.201	278	127	7	6	274	12	281	4.78e-86	258
MS.gene056981.t1	AT2G43570	51.301	269	115	6	11	274	20	277	2.32e-85	256
MS.gene056981.t1	AT2G43620	45.520	279	131	8	8	274	14	283	2.17e-81	246
MS.gene056981.t1	AT3G47540	45.815	227	96	6	50	274	13	214	1.50e-59	188
MS.gene056981.t1	AT1G56680	41.071	280	143	12	6	274	12	280	1.74e-59	191
MS.gene056981.t1	AT1G56680	41.071	280	143	12	6	274	35	303	5.29e-59	190
MS.gene056981.t1	AT3G47540	45.291	223	95	6	50	270	13	210	1.13e-55	181
MS.gene056981.t1	AT2G43600	36.237	287	156	11	1	274	1	273	3.13e-55	179
MS.gene056981.t1	AT2G43600	36.237	287	156	11	1	274	22	294	9.37e-55	179
MS.gene056981.t1	AT3G12500	37.324	284	134	8	27	274	45	320	2.80e-52	174
MS.gene056981.t1	AT1G02360	37.657	239	113	5	71	274	28	265	2.56e-49	164
MS.gene056981.t1	AT1G02360	37.657	239	113	5	71	274	80	317	9.02e-49	164
MS.gene056981.t1	AT1G02360	37.657	239	113	5	71	274	74	311	9.30e-49	164
MS.gene056981.t1	AT4G01700	37.975	237	111	5	73	274	38	273	6.04e-47	158
MS.gene056981.t1	AT1G05850	26.609	233	125	7	83	274	77	304	1.14e-19	87.4
MS.gene056981.t1	AT1G05850	26.609	233	125	7	83	274	77	304	1.14e-19	87.4
MS.gene056981.t1	AT3G16920	27.126	247	134	10	73	274	68	313	6.17e-18	82.4
MS.gene056981.t1	AT3G16920	27.126	247	134	10	73	274	92	337	8.22e-18	82.4

Find 67 sgRNAs with CRISPR-Local

Find 76 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGATCATTGGCCACAGTTTC+AGG	0.179142	2.1:-5136359	None:intergenic
CAGGAGTACTAGGGGAAATT+TGG	0.265985	2.1:-5135480	None:intergenic
TTATCTTGGAACTTCAACTA+TGG	0.266030	2.1:+5136296	MS.gene056981:CDS
ACATTCAAGTCGACCATTAA+TGG	0.286036	2.1:-5136468	None:intergenic
CACTCAATATTGTAGTCAAT+TGG	0.295638	2.1:+5136535	MS.gene056981:CDS
CGGCCATAGTATCCTTTGTT+AGG	0.327532	2.1:-5136260	None:intergenic
CTCAATTCTTATAATCAGTT+TGG	0.343244	2.1:+5135628	MS.gene056981:CDS
TATAATCAGTTTGGTAGGTC+TGG	0.352546	2.1:+5135637	MS.gene056981:CDS
TCAAGACAGCATTATGGTAT+TGG	0.355700	2.1:+5136393	MS.gene056981:CDS
TTGCTAGGACCAGGAGTACT+AGG	0.376009	2.1:-5135490	None:intergenic
GTGGACCCATTCAATTATCT+TGG	0.391722	2.1:+5136282	MS.gene056981:CDS
ATACCATAATGCTGTCTTGA+AGG	0.394568	2.1:-5136390	None:intergenic
AGCAGCTGCAATCTCACGTT+TGG	0.398595	2.1:-5135674	None:intergenic
GCAACGATTAGAGCCATTAA+TGG	0.421305	2.1:+5136455	MS.gene056981:CDS
TGCTATATAGAAGAGATTGA+TGG	0.423190	2.1:+5136188	MS.gene056981:CDS
TGTCCTTCAAGACAGCATTA+TGG	0.430786	2.1:+5136387	MS.gene056981:CDS
AGTCAATTGGGTGTTGCTCC+TGG	0.467511	2.1:+5136548	MS.gene056981:CDS
AATGTCATGAACCAAGGCTT+TGG	0.470097	2.1:+5136431	MS.gene056981:CDS
AAACTGATTATAAGAATTGA+GGG	0.470862	2.1:-5135626	None:intergenic
ACTCAATATTGTAGTCAATT+GGG	0.471459	2.1:+5136536	MS.gene056981:CDS
GAAGGACACTAGAGGATCAT+TGG	0.475900	2.1:-5136372	None:intergenic
CAAATTTCCCCTAGTACTCC+TGG	0.478722	2.1:+5135481	MS.gene056981:CDS
CAAACTGATTATAAGAATTG+AGG	0.480529	2.1:-5135627	None:intergenic
GAAGTTCCAAGATAATTGAA+TGG	0.481824	2.1:-5136288	None:intergenic
AACTTCAACTATGGACCAGC+TGG	0.489552	2.1:+5136305	MS.gene056981:CDS
CAAGCTGATTCTAGTTGTGC+AGG	0.493089	2.1:+5135568	MS.gene056981:CDS
GCTCCTAACAAAGGATACTA+TGG	0.497355	2.1:+5136257	MS.gene056981:CDS
CCGCATAACAAGGACCTTGT+TGG	0.499874	2.1:-5135456	None:intergenic
TAATCGTTGCACCAAAGCCT+TGG	0.508562	2.1:-5136442	None:intergenic
ATTCTTATAATCAGTTTGGT+AGG	0.512286	2.1:+5135632	MS.gene056981:CDS
AAGTTCCAAGATAATTGAAT+GGG	0.518029	2.1:-5136287	None:intergenic
GGTTTATGTTGCAGCGAACA+TGG	0.524712	2.1:+5135394	MS.gene056981:CDS
CAACAAGGTCCTTGTTATGC+GGG	0.525104	2.1:+5135457	MS.gene056981:CDS
GTTTGGTAGGTCTGGTTCTG+TGG	0.537901	2.1:+5135645	MS.gene056981:CDS
AGAGATTGATGGTGCATCAA+AGG	0.541283	2.1:+5136199	MS.gene056981:CDS
GAAATTTGGCCCGCATAACA+AGG	0.541623	2.1:-5135466	None:intergenic
AAACCATTGTCCTTTCCAGC+TGG	0.541792	2.1:-5136320	None:intergenic
TGCTAGGACCAGGAGTACTA+GGG	0.545368	2.1:-5135489	None:intergenic
AACAAAGGATACTATGGCCG+TGG	0.546171	2.1:+5136263	MS.gene056981:CDS
CAACTATGGACCAGCTGGAA+AGG	0.554552	2.1:+5136310	MS.gene056981:CDS
AATGCGAGTGCTCAAAATTG+TGG	0.565535	2.1:+5135361	MS.gene056981:CDS
CAAAATTGTGGGTGTGAGGA+AGG	0.568606	2.1:+5135373	MS.gene056981:CDS
CCAACAAGGTCCTTGTTATG+CGG	0.570087	2.1:+5135456	MS.gene056981:CDS
ACACGAGTCTGAACTGTGGT+TGG	0.575224	2.1:-5136503	None:intergenic
ACTGCTGCATATTGTGGCAC+AGG	0.575567	2.1:+5135430	MS.gene056981:CDS
TGTGGCACAGGGTGCCAACA+AGG	0.576717	2.1:+5135442	MS.gene056981:CDS
ATGCGAGTGCTCAAAATTGT+GGG	0.578430	2.1:+5135362	MS.gene056981:CDS
ACCACAGTTCAGACTCGTGT+TGG	0.593974	2.1:+5136506	MS.gene056981:CDS
GGTAACACTGCTGCATATTG+TGG	0.606429	2.1:+5135424	MS.gene056981:CDS
TTGACATCATTGCTAGGACC+AGG	0.607494	2.1:-5135499	None:intergenic
AAGATAATTGAATGGGTCCA+CGG	0.609609	2.1:-5136280	None:intergenic
ATTGAACTCTCCTGAAACTG+TGG	0.610000	2.1:+5136349	MS.gene056981:CDS
TATCCTTTGTTAGGAGCACA+CGG	0.615783	2.1:-5136251	None:intergenic
TAGCAAGTAAGCTTATCACC+AGG	0.624987	2.1:-5136566	None:intergenic
GCCACGTTGACATCATTGCT+AGG	0.637618	2.1:-5135505	None:intergenic
TGCTCAAAATTGTGGGTGTG+AGG	0.640043	2.1:+5135369	MS.gene056981:CDS
TGCAGCGAACATGGATATTG+TGG	0.649796	2.1:+5135403	MS.gene056981:CDS
GGACCAGCTGGAAAGGACAA+TGG	0.650317	2.1:+5136317	MS.gene056981:CDS
TACCCGTGTGCTCCTAACAA+AGG	0.653160	2.1:+5136248	MS.gene056981:CDS
GCTGTCTTGAAGGACACTAG+AGG	0.672889	2.1:-5136380	None:intergenic
CTGCTGCATATTGTGGCACA+GGG	0.674145	2.1:+5135431	MS.gene056981:CDS
GTGCACAATGTCATGAACCA+AGG	0.676197	2.1:+5136425	MS.gene056981:CDS
AATGGTCGACTTGAATGTGA+TGG	0.677633	2.1:+5136473	MS.gene056981:CDS
GCTAGGACCAGGAGTACTAG+GGG	0.693722	2.1:-5135488	None:intergenic
ATCCTTTGTTAGGAGCACAC+GGG	0.711989	2.1:-5136250	None:intergenic
TCCTAGCAATGATGTCAACG+TGG	0.754474	2.1:+5135504	MS.gene056981:CDS
ACCAACACGAGTCTGAACTG+TGG	0.761414	2.1:-5136507	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAACTGATTATAAGAATTGA+GGG	-	chr2.1:5135629-5135648	None:intergenic	20.0%
!!	AACCATGATCATAATAAAAA+AGG	-	chr2.1:5135335-5135354	None:intergenic	20.0%
!!!	AACCTTTTTTATTATGATCA+TGG	+	chr2.1:5135330-5135349	MS.gene056981:CDS	20.0%
!	AACAAGAATTGAACTAAATG+AGG	-	chr2.1:5136016-5136035	None:intergenic	25.0%
!	AAGTTCCAAGATAATTGAAT+GGG	-	chr2.1:5136290-5136309	None:intergenic	25.0%
!	AATCTCAATCAATGACTTAA+AGG	+	chr2.1:5135921-5135940	MS.gene056981:intron	25.0%
!	ACTCAATATTGTAGTCAATT+GGG	+	chr2.1:5136536-5136555	MS.gene056981:CDS	25.0%
!	ATAAGCTATATGATTTGACT+AGG	+	chr2.1:5136043-5136062	MS.gene056981:intron	25.0%
!	ATTCTTATAATCAGTTTGGT+AGG	+	chr2.1:5135632-5135651	MS.gene056981:CDS	25.0%
!	CAAACTGATTATAAGAATTG+AGG	-	chr2.1:5135630-5135649	None:intergenic	25.0%
!	CTCAATTCTTATAATCAGTT+TGG	+	chr2.1:5135628-5135647	MS.gene056981:CDS	25.0%
	CACTCAATATTGTAGTCAAT+TGG	+	chr2.1:5136535-5136554	MS.gene056981:CDS	30.0%
	CGTTATGTATGTTGAGAAAA+TGG	-	chr2.1:5136141-5136160	None:intergenic	30.0%
	GAAGTTCCAAGATAATTGAA+TGG	-	chr2.1:5136291-5136310	None:intergenic	30.0%
	TGCTATATAGAAGAGATTGA+TGG	+	chr2.1:5136188-5136207	MS.gene056981:CDS	30.0%
	TTATCTTGGAACTTCAACTA+TGG	+	chr2.1:5136296-5136315	MS.gene056981:CDS	30.0%
!	GTCATTGATTGAGATTGTAA+AGG	-	chr2.1:5135917-5135936	None:intergenic	30.0%
	AAGATAATTGAATGGGTCCA+CGG	-	chr2.1:5136283-5136302	None:intergenic	35.0%
	ACATTCAAGTCGACCATTAA+TGG	-	chr2.1:5136471-5136490	None:intergenic	35.0%
	ACTTTGATTAGCATTCAGCT+TGG	+	chr2.1:5135964-5135983	MS.gene056981:intron	35.0%
	ATACCATAATGCTGTCTTGA+AGG	-	chr2.1:5136393-5136412	None:intergenic	35.0%
	TATAATCAGTTTGGTAGGTC+TGG	+	chr2.1:5135637-5135656	MS.gene056981:CDS	35.0%
	TCAAGACAGCATTATGGTAT+TGG	+	chr2.1:5136393-5136412	MS.gene056981:CDS	35.0%
	AATGCGAGTGCTCAAAATTG+TGG	+	chr2.1:5135361-5135380	MS.gene056981:CDS	40.0%
	AATGTCATGAACCAAGGCTT+TGG	+	chr2.1:5136431-5136450	MS.gene056981:CDS	40.0%
	ATGCGAGTGCTCAAAATTGT+GGG	+	chr2.1:5135362-5135381	MS.gene056981:CDS	40.0%
	ATTGAACTCTCCTGAAACTG+TGG	+	chr2.1:5136349-5136368	MS.gene056981:CDS	40.0%
	GCAACGATTAGAGCCATTAA+TGG	+	chr2.1:5136455-5136474	MS.gene056981:CDS	40.0%
	GCTCCTAACAAAGGATACTA+TGG	+	chr2.1:5136257-5136276	MS.gene056981:CDS	40.0%
	GTGGACCCATTCAATTATCT+TGG	+	chr2.1:5136282-5136301	MS.gene056981:CDS	40.0%
	TAGCAAGTAAGCTTATCACC+AGG	-	chr2.1:5136569-5136588	None:intergenic	40.0%
	TGTCCTTCAAGACAGCATTA+TGG	+	chr2.1:5136387-5136406	MS.gene056981:CDS	40.0%
!	TATCCTTTGTTAGGAGCACA+CGG	-	chr2.1:5136254-5136273	None:intergenic	40.0%
!!	AATGGTCGACTTGAATGTGA+TGG	+	chr2.1:5136473-5136492	MS.gene056981:CDS	40.0%
!!	AGAGATTGATGGTGCATCAA+AGG	+	chr2.1:5136199-5136218	MS.gene056981:CDS	40.0%
!!!	GGAAAGGACAATGGTTTTGA+TGG	+	chr2.1:5136326-5136345	MS.gene056981:CDS	40.0%
	AAACCATTGTCCTTTCCAGC+TGG	-	chr2.1:5136323-5136342	None:intergenic	45.0%
	AACAAAGGATACTATGGCCG+TGG	+	chr2.1:5136263-5136282	MS.gene056981:CDS	45.0%
	AACTTCAACTATGGACCAGC+TGG	+	chr2.1:5136305-5136324	MS.gene056981:CDS	45.0%
	CAAAATTGTGGGTGTGAGGA+AGG	+	chr2.1:5135373-5135392	MS.gene056981:CDS	45.0%
	CAAATTTCCCCTAGTACTCC+TGG	+	chr2.1:5135481-5135500	MS.gene056981:CDS	45.0%
	CGGCCATAGTATCCTTTGTT+AGG	-	chr2.1:5136263-5136282	None:intergenic	45.0%
	GAAATTTGGCCCGCATAACA+AGG	-	chr2.1:5135469-5135488	None:intergenic	45.0%
	GAAGGACACTAGAGGATCAT+TGG	-	chr2.1:5136375-5136394	None:intergenic	45.0%
	GGTAACACTGCTGCATATTG+TGG	+	chr2.1:5135424-5135443	MS.gene056981:CDS	45.0%
	GGTTTATGTTGCAGCGAACA+TGG	+	chr2.1:5135394-5135413	MS.gene056981:CDS	45.0%
	GTGCACAATGTCATGAACCA+AGG	+	chr2.1:5136425-5136444	MS.gene056981:CDS	45.0%
	TAATCGTTGCACCAAAGCCT+TGG	-	chr2.1:5136445-5136464	None:intergenic	45.0%
	TCCTAGCAATGATGTCAACG+TGG	+	chr2.1:5135504-5135523	MS.gene056981:CDS	45.0%
	TGCAGCGAACATGGATATTG+TGG	+	chr2.1:5135403-5135422	MS.gene056981:CDS	45.0%
	TGCTCAAAATTGTGGGTGTG+AGG	+	chr2.1:5135369-5135388	MS.gene056981:CDS	45.0%
	TTGACATCATTGCTAGGACC+AGG	-	chr2.1:5135502-5135521	None:intergenic	45.0%
!	ATCCTTTGTTAGGAGCACAC+GGG	-	chr2.1:5136253-5136272	None:intergenic	45.0%
!	CAACAAGGTCCTTGTTATGC+GGG	+	chr2.1:5135457-5135476	MS.gene056981:CDS	45.0%
!	CAAGCTGATTCTAGTTGTGC+AGG	+	chr2.1:5135568-5135587	MS.gene056981:CDS	45.0%
!	CCAACAAGGTCCTTGTTATG+CGG	+	chr2.1:5135456-5135475	MS.gene056981:CDS	45.0%
!!	CAGGAGTACTAGGGGAAATT+TGG	-	chr2.1:5135483-5135502	None:intergenic	45.0%
	ACACGAGTCTGAACTGTGGT+TGG	-	chr2.1:5136506-5136525	None:intergenic	50.0%
	ACCAACACGAGTCTGAACTG+TGG	-	chr2.1:5136510-5136529	None:intergenic	50.0%
	ACCACAGTTCAGACTCGTGT+TGG	+	chr2.1:5136506-5136525	MS.gene056981:CDS	50.0%
	ACTGCTGCATATTGTGGCAC+AGG	+	chr2.1:5135430-5135449	MS.gene056981:CDS	50.0%
	AGCAGCTGCAATCTCACGTT+TGG	-	chr2.1:5135677-5135696	None:intergenic	50.0%
	CAACTATGGACCAGCTGGAA+AGG	+	chr2.1:5136310-5136329	MS.gene056981:CDS	50.0%
	CCGCATAACAAGGACCTTGT+TGG	-	chr2.1:5135459-5135478	None:intergenic	50.0%
	CTGCTGCATATTGTGGCACA+GGG	+	chr2.1:5135431-5135450	MS.gene056981:CDS	50.0%
	GCCACGTTGACATCATTGCT+AGG	-	chr2.1:5135508-5135527	None:intergenic	50.0%
	GCTGTCTTGAAGGACACTAG+AGG	-	chr2.1:5136383-5136402	None:intergenic	50.0%
	GGATCATTGGCCACAGTTTC+AGG	-	chr2.1:5136362-5136381	None:intergenic	50.0%
	TACCCGTGTGCTCCTAACAA+AGG	+	chr2.1:5136248-5136267	MS.gene056981:CDS	50.0%
!!	AGTCAATTGGGTGTTGCTCC+TGG	+	chr2.1:5136548-5136567	MS.gene056981:CDS	50.0%
!!	GTTTGGTAGGTCTGGTTCTG+TGG	+	chr2.1:5135645-5135664	MS.gene056981:CDS	50.0%
!!	TGCTAGGACCAGGAGTACTA+GGG	-	chr2.1:5135492-5135511	None:intergenic	50.0%
!!	TTGCTAGGACCAGGAGTACT+AGG	-	chr2.1:5135493-5135512	None:intergenic	50.0%
	GGACCAGCTGGAAAGGACAA+TGG	+	chr2.1:5136317-5136336	MS.gene056981:CDS	55.0%
!!	GCTAGGACCAGGAGTACTAG+GGG	-	chr2.1:5135491-5135510	None:intergenic	55.0%
!	TGTGGCACAGGGTGCCAACA+AGG	+	chr2.1:5135442-5135461	MS.gene056981:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.1	gene	5135307	5136589	5135307	ID=MS.gene056981
chr2.1	mRNA	5135307	5136589	5135307	ID=MS.gene056981.t1;Parent=MS.gene056981
chr2.1	exon	5135307	5135724	5135307	ID=MS.gene056981.t1.exon1;Parent=MS.gene056981.t1
chr2.1	CDS	5135307	5135724	5135307	ID=cds.MS.gene056981.t1;Parent=MS.gene056981.t1
chr2.1	exon	5136183	5136589	5136183	ID=MS.gene056981.t1.exon2;Parent=MS.gene056981.t1
chr2.1	CDS	5136183	5136589	5136183	ID=cds.MS.gene056981.t1;Parent=MS.gene056981.t1

Gene Sequence

>MS.gene056981

ATGTCTATAGCAAAACTTGCTATAACCTTTTTTATTATGATCATGGTTTCAAAAAATGCGAGTGCTCAAAATTGTGGGTGTGAGGAAGGTTTATGTTGCAGCGAACATGGATATTGTGGTAACACTGCTGCATATTGTGGCACAGGGTGCCAACAAGGTCCTTGTTATGCGGGCCAAATTTCCCCTAGTACTCCTGGTCCTAGCAATGATGTCAACGTGGCTGACATTGTTACACAAGAATTCTTCAATAGTATAATTGATCAAGCTGATTCTAGTTGTGCAGGAAAGAACTTCTACTCAAGAGCTGCTTTTCTTGATGCCCTCAATTCTTATAATCAGTTTGGTAGGTCTGGTTCTGTGGATGACTCCAAACGTGAGATTGCAGCTGCTTTTGCACATTTCACACATGAAACTCTACGTAAGTATTATATCATTCAAAGAATCAATCACAAGTTTAGTTTTCATGCAATTTGATCGCTAAAACAACAAAATTTTAGAATGATTTCAGTGATTAAATTGATTGAACTAAGAACTAATATGATCAATGATTATTACTTTCAATAATCATTTGAGAATTTAGTTAATCACAAAGATAAAACTGTCAAAACCTTTACAATCTCAATCAATGACTTAAAGGCGAATCAATATGATTAATGAACTTTGATTAGCATTCAGCTTGGTTAACAGTTGTTTGAGACTAACGAGACCTCATTTAGTTCAATTCTTGTTCTAGCGTATAAGCTATATGATTTGACTAGGTTTAATTTTGTACACACACTCACATCTATAATAAGCTAATAAGTAATAAGTAAATTTCATGTTTCTTAATCTCCATTTTCTCAACATACATAACGTGTGAAATTAATGTTGATGCAGATTTTTGCTATATAGAAGAGATTGATGGTGCATCAAAGGACTACTGCGATGAAAGCAACACAGAGTACCCGTGTGCTCCTAACAAAGGATACTATGGCCGTGGACCCATTCAATTATCTTGGAACTTCAACTATGGACCAGCTGGAAAGGACAATGGTTTTGATGGATTGAACTCTCCTGAAACTGTGGCCAATGATCCTCTAGTGTCCTTCAAGACAGCATTATGGTATTGGATGAAATATGTGCACAATGTCATGAACCAAGGCTTTGGTGCAACGATTAGAGCCATTAATGGTCGACTTGAATGTGATGGTGCTAAGCCAACCACAGTTCAGACTCGTGTTGGTTACTACACTCAATATTGTAGTCAATTGGGTGTTGCTCCTGGTGATAAGCTTACTTGCTAA

Protein sequence

>MS.gene056981.t1

MSIAKLAITFFIMIMVSKNASAQNCGCEEGLCCSEHGYCGNTAAYCGTGCQQGPCYAGQISPSTPGPSNDVNVADIVTQEFFNSIIDQADSSCAGKNFYSRAAFLDALNSYNQFGRSGSVDDSKREIAAAFAHFTHETLHFCYIEEIDGASKDYCDESNTEYPCAPNKGYYGRGPIQLSWNFNYGPAGKDNGFDGLNSPETVANDPLVSFKTALWYWMKYVHNVMNQGFGATIRAINGRLECDGAKPTTVQTRVGYYTQYCSQLGVAPGDKLTC