Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050640.t1 | XP_003626559.1 | 91 | 335 | 21 | 2 | 1 | 333 | 1 | 328 | 1.30E-165 | 592.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050640.t1 | Q8H0Y8 | 50.2 | 215 | 78 | 9 | 8 | 199 | 7 | 215 | 3.0e-38 | 160.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050640.t1 | G7L427 | 91.0 | 335 | 21 | 2 | 1 | 333 | 1 | 328 | 9.2e-166 | 592.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene050640.t1 | TF | WRKY |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050640 | MS.gene051525 | 0.80186 | 7.38E-49 | -1.69E-46 |
| MS.gene050640 | MS.gene052011 | -0.811518 | 6.73E-51 | -1.69E-46 |
| MS.gene050640 | MS.gene052637 | 0.804498 | 2.10E-49 | -1.69E-46 |
| MS.gene050640 | MS.gene055217 | 0.824407 | 8.21E-54 | -1.69E-46 |
| MS.gene050640 | MS.gene055488 | -0.840881 | 6.66E-58 | -1.69E-46 |
| MS.gene050640 | MS.gene056981 | 0.803041 | 4.21E-49 | -1.69E-46 |
| MS.gene050640 | MS.gene057476 | 0.812117 | 4.98E-51 | -1.69E-46 |
| MS.gene050640 | MS.gene057843 | 0.81829 | 2.12E-52 | -1.69E-46 |
| MS.gene050640 | MS.gene059820 | 0.820544 | 6.48E-53 | -1.69E-46 |
| MS.gene050640 | MS.gene060038 | 0.827055 | 1.93E-54 | -1.69E-46 |
| MS.gene050640 | MS.gene067862 | 0.806768 | 7.01E-50 | -1.69E-46 |
| MS.gene050640 | MS.gene070915 | 0.811007 | 8.68E-51 | -1.69E-46 |
| MS.gene050640 | MS.gene08019 | 0.836958 | 6.90E-57 | -1.69E-46 |
| MS.gene050640 | MS.gene08264 | 0.802956 | 4.39E-49 | -1.69E-46 |
| MS.gene050640 | MS.gene22803 | 0.968744 | 4.09E-129 | -1.69E-46 |
| MS.gene050640 | MS.gene33262 | 0.802947 | 4.40E-49 | -1.69E-46 |
| MS.gene050640 | MS.gene34874 | 0.802199 | 6.28E-49 | -1.69E-46 |
| MS.gene050640 | MS.gene38033 | 0.802889 | 4.53E-49 | -1.69E-46 |
| MS.gene050640 | MS.gene42798 | 0.800395 | 1.47E-48 | -1.69E-46 |
| MS.gene050640 | MS.gene44673 | 0.80329 | 3.74E-49 | -1.69E-46 |
| MS.gene050640 | MS.gene44996 | 0.806029 | 1.00E-49 | -1.69E-46 |
| MS.gene050640 | MS.gene48558 | 0.814574 | 1.44E-51 | -1.69E-46 |
| MS.gene050640 | MS.gene48777 | 0.825353 | 4.91E-54 | -1.69E-46 |
| MS.gene050640 | MS.gene49850 | 0.826423 | 2.73E-54 | -1.69E-46 |
| MS.gene050640 | MS.gene49992 | 0.815994 | 6.95E-52 | -1.69E-46 |
| MS.gene050640 | MS.gene53834 | 0.814086 | 1.84E-51 | -1.69E-46 |
| MS.gene050640 | MS.gene57287 | 0.805477 | 1.31E-49 | -1.69E-46 |
| MS.gene050640 | MS.gene59127 | 0.804279 | 2.33E-49 | -1.69E-46 |
| MS.gene050640 | MS.gene60918 | 0.811466 | 6.90E-51 | -1.69E-46 |
| MS.gene050640 | MS.gene68339 | 0.808849 | 2.53E-50 | -1.69E-46 |
| MS.gene050640 | MS.gene70072 | 0.836715 | 7.96E-57 | -1.69E-46 |
| MS.gene050640 | MS.gene70077 | 0.814837 | 1.26E-51 | -1.69E-46 |
| MS.gene050640 | MS.gene74752 | 0.823224 | 1.55E-53 | -1.69E-46 |
| MS.gene050640 | MS.gene74799 | 0.821194 | 4.60E-53 | -1.69E-46 |
| MS.gene050640 | MS.gene74803 | 0.806077 | 9.80E-50 | -1.69E-46 |
| MS.gene050640 | MS.gene74809 | 0.808914 | 2.45E-50 | -1.69E-46 |
| MS.gene050640 | MS.gene80082 | 0.800412 | 1.46E-48 | -1.69E-46 |
| MS.gene050640 | MS.gene81554 | 0.858034 | 1.09E-62 | -1.69E-46 |
| MS.gene050640 | MS.gene83118 | 0.86317 | 3.01E-64 | -1.69E-46 |
| MS.gene050640 | MS.gene84344 | 0.802944 | 4.41E-49 | -1.69E-46 |
| MS.gene050640 | MS.gene85276 | -0.804115 | 2.52E-49 | -1.69E-46 |
| MS.gene050640 | MS.gene85784 | 0.805353 | 1.39E-49 | -1.69E-46 |
| MS.gene050640 | MS.gene85785 | 0.812071 | 5.10E-51 | -1.69E-46 |
| MS.gene050640 | MS.gene86331 | 0.823508 | 1.33E-53 | -1.69E-46 |
| MS.gene050640 | MS.gene89337 | 0.837674 | 4.52E-57 | -1.69E-46 |
| MS.gene050640 | MS.gene90673 | 0.813969 | 1.96E-51 | -1.69E-46 |
| MS.gene050640 | MS.gene91562 | 0.834056 | 3.74E-56 | -1.69E-46 |
| MS.gene050640 | MS.gene91657 | 0.804833 | 1.79E-49 | -1.69E-46 |
| MS.gene050640 | MS.gene92106 | 0.805105 | 1.57E-49 | -1.69E-46 |
| MS.gene050640 | MS.gene93869 | 0.814051 | 1.88E-51 | -1.69E-46 |
| MS.gene050640 | MS.gene94804 | 0.801887 | 7.28E-49 | -1.69E-46 |
| MS.gene050640 | MS.gene95707 | 0.828337 | 9.51E-55 | -1.69E-46 |
| MS.gene050640 | MS.gene96111 | 0.816215 | 6.20E-52 | -1.69E-46 |
| MS.gene050640 | MS.gene97211 | 0.811592 | 6.48E-51 | -1.69E-46 |
| MS.gene050640 | MS.gene98800 | 0.810673 | 1.03E-50 | -1.69E-46 |
| MS.gene050640 | MS.gene98801 | 0.805005 | 1.65E-49 | -1.69E-46 |
| MS.gene050640 | MS.gene98808 | 0.822833 | 1.92E-53 | -1.69E-46 |
| MS.gene050640 | MS.gene99638 | 0.812951 | 3.27E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050640.t1 | MTR_7g117200 | 91.045 | 335 | 21 | 2 | 1 | 333 | 1 | 328 | 0.0 | 615 |
| MS.gene050640.t1 | MTR_8g027860 | 44.565 | 368 | 142 | 15 | 1 | 329 | 1 | 345 | 4.93e-78 | 243 |
| MS.gene050640.t1 | MTR_8g099350 | 36.413 | 368 | 191 | 10 | 1 | 332 | 1 | 361 | 3.70e-55 | 184 |
| MS.gene050640.t1 | MTR_3g090860 | 53.125 | 192 | 67 | 9 | 12 | 185 | 7 | 193 | 2.17e-53 | 179 |
| MS.gene050640.t1 | MTR_7g073430 | 33.500 | 200 | 108 | 5 | 9 | 198 | 11 | 195 | 6.18e-26 | 105 |
| MS.gene050640.t1 | MTR_7g073380 | 32.275 | 189 | 97 | 5 | 9 | 184 | 12 | 182 | 5.35e-25 | 102 |
| MS.gene050640.t1 | MTR_8g005750 | 36.364 | 176 | 85 | 5 | 15 | 184 | 8 | 162 | 2.41e-24 | 100 |
| MS.gene050640.t1 | MTR_5g067680 | 40.650 | 123 | 59 | 1 | 118 | 240 | 195 | 303 | 4.71e-21 | 92.8 |
| MS.gene050640.t1 | MTR_2g075690 | 30.622 | 209 | 109 | 6 | 11 | 195 | 15 | 211 | 9.08e-21 | 91.3 |
| MS.gene050640.t1 | MTR_0002s1250 | 30.556 | 180 | 96 | 7 | 15 | 184 | 10 | 170 | 2.69e-20 | 89.4 |
| MS.gene050640.t1 | MTR_5g067700 | 31.892 | 185 | 101 | 6 | 7 | 189 | 10 | 171 | 6.77e-20 | 87.4 |
| MS.gene050640.t1 | MTR_3g093830 | 30.570 | 193 | 103 | 5 | 18 | 196 | 23 | 198 | 2.58e-19 | 87.4 |
| MS.gene050640.t1 | MTR_2g075700 | 45.349 | 86 | 37 | 2 | 100 | 184 | 127 | 203 | 7.98e-19 | 85.9 |
| MS.gene050640.t1 | MTR_2g075680 | 45.349 | 86 | 38 | 2 | 99 | 184 | 131 | 207 | 1.36e-17 | 82.4 |
| MS.gene050640.t1 | MTR_2g075750 | 49.180 | 61 | 31 | 0 | 124 | 184 | 27 | 87 | 6.94e-17 | 77.8 |
| MS.gene050640.t1 | MTR_2g075610 | 49.180 | 61 | 31 | 0 | 124 | 184 | 28 | 88 | 9.24e-17 | 77.8 |
| MS.gene050640.t1 | MTR_1g009613 | 43.529 | 85 | 44 | 2 | 98 | 182 | 237 | 317 | 3.48e-16 | 78.6 |
| MS.gene050640.t1 | MTR_7g109600 | 40.870 | 115 | 63 | 3 | 78 | 189 | 3 | 115 | 5.42e-16 | 77.0 |
| MS.gene050640.t1 | MTR_7g028415 | 55.224 | 67 | 25 | 2 | 124 | 190 | 92 | 153 | 1.62e-15 | 73.9 |
| MS.gene050640.t1 | MTR_7g028710 | 55.224 | 67 | 25 | 2 | 124 | 190 | 92 | 153 | 1.62e-15 | 73.9 |
| MS.gene050640.t1 | MTR_7g109800 | 40.594 | 101 | 56 | 2 | 88 | 187 | 107 | 204 | 1.77e-15 | 76.3 |
| MS.gene050640.t1 | MTR_8g028565 | 38.679 | 106 | 59 | 3 | 82 | 187 | 114 | 213 | 4.20e-15 | 75.5 |
| MS.gene050640.t1 | MTR_4g127040 | 32.624 | 141 | 72 | 3 | 42 | 182 | 183 | 300 | 5.46e-15 | 75.1 |
| MS.gene050640.t1 | MTR_8g098945 | 47.297 | 74 | 33 | 3 | 121 | 194 | 125 | 192 | 6.10e-15 | 74.3 |
| MS.gene050640.t1 | MTR_8g087000 | 36.885 | 122 | 65 | 3 | 99 | 215 | 45 | 159 | 9.71e-15 | 73.2 |
| MS.gene050640.t1 | MTR_8g032510 | 50.000 | 60 | 30 | 0 | 125 | 184 | 119 | 178 | 1.05e-14 | 73.6 |
| MS.gene050640.t1 | MTR_8g087000 | 39.796 | 98 | 52 | 2 | 118 | 215 | 70 | 160 | 1.05e-14 | 73.2 |
| MS.gene050640.t1 | MTR_7g079040 | 51.515 | 66 | 26 | 2 | 126 | 191 | 155 | 214 | 3.58e-14 | 72.8 |
| MS.gene050640.t1 | MTR_5g016610 | 54.386 | 57 | 24 | 1 | 126 | 182 | 200 | 254 | 4.44e-14 | 71.6 |
| MS.gene050640.t1 | MTR_2g032030 | 41.748 | 103 | 52 | 4 | 126 | 222 | 268 | 368 | 4.61e-14 | 72.8 |
| MS.gene050640.t1 | MTR_2g032030 | 41.748 | 103 | 52 | 4 | 126 | 222 | 268 | 368 | 6.16e-14 | 72.8 |
| MS.gene050640.t1 | MTR_7g079010 | 45.122 | 82 | 40 | 2 | 124 | 205 | 140 | 216 | 6.66e-14 | 70.5 |
| MS.gene050640.t1 | MTR_2g083870 | 43.750 | 96 | 48 | 3 | 99 | 190 | 50 | 143 | 7.72e-14 | 70.9 |
| MS.gene050640.t1 | MTR_5g043880 | 52.381 | 63 | 26 | 2 | 124 | 186 | 123 | 181 | 1.01e-13 | 70.9 |
| MS.gene050640.t1 | MTR_2g016770 | 46.479 | 71 | 32 | 2 | 126 | 196 | 36 | 100 | 1.04e-13 | 69.7 |
| MS.gene050640.t1 | MTR_8g096730 | 46.269 | 67 | 31 | 2 | 124 | 190 | 69 | 130 | 1.17e-13 | 67.8 |
| MS.gene050640.t1 | MTR_2g016770 | 46.479 | 71 | 32 | 2 | 126 | 196 | 28 | 92 | 1.20e-13 | 69.3 |
| MS.gene050640.t1 | MTR_1g070455 | 52.632 | 57 | 25 | 1 | 126 | 182 | 294 | 348 | 2.92e-13 | 70.1 |
| MS.gene050640.t1 | MTR_4g094908 | 50.877 | 57 | 26 | 1 | 126 | 182 | 267 | 321 | 6.91e-13 | 68.9 |
| MS.gene050640.t1 | MTR_1g086790 | 50.000 | 64 | 27 | 2 | 124 | 187 | 157 | 215 | 7.32e-13 | 68.9 |
| MS.gene050640.t1 | MTR_5g091390 | 49.153 | 59 | 27 | 1 | 124 | 182 | 156 | 211 | 7.55e-13 | 68.6 |
| MS.gene050640.t1 | MTR_3g009470 | 45.714 | 70 | 32 | 3 | 125 | 194 | 280 | 343 | 7.63e-13 | 69.7 |
| MS.gene050640.t1 | MTR_3g009470 | 33.663 | 101 | 59 | 2 | 124 | 219 | 494 | 591 | 7.01e-11 | 63.5 |
| MS.gene050640.t1 | MTR_4g082580 | 44.118 | 68 | 35 | 1 | 125 | 192 | 145 | 209 | 7.79e-13 | 68.9 |
| MS.gene050640.t1 | MTR_4g082580 | 41.772 | 79 | 43 | 1 | 112 | 190 | 265 | 340 | 2.17e-11 | 64.7 |
| MS.gene050640.t1 | MTR_4g094588 | 47.143 | 70 | 32 | 2 | 124 | 193 | 177 | 241 | 7.95e-13 | 68.9 |
| MS.gene050640.t1 | MTR_3g009470 | 45.714 | 70 | 32 | 3 | 125 | 194 | 280 | 343 | 8.27e-13 | 69.3 |
| MS.gene050640.t1 | MTR_3g095080 | 44.444 | 72 | 37 | 1 | 112 | 183 | 131 | 199 | 1.35e-12 | 66.6 |
| MS.gene050640.t1 | MTR_3g095080 | 44.444 | 72 | 37 | 1 | 112 | 183 | 155 | 223 | 1.37e-12 | 67.0 |
| MS.gene050640.t1 | MTR_2g033820 | 48.438 | 64 | 30 | 1 | 124 | 187 | 202 | 262 | 1.43e-12 | 68.2 |
| MS.gene050640.t1 | MTR_8g092140 | 50.000 | 60 | 27 | 1 | 124 | 183 | 159 | 215 | 1.57e-12 | 66.6 |
| MS.gene050640.t1 | MTR_7g011820 | 46.875 | 64 | 30 | 2 | 125 | 188 | 228 | 287 | 1.59e-12 | 68.6 |
| MS.gene050640.t1 | MTR_7g011820 | 44.776 | 67 | 34 | 1 | 124 | 190 | 409 | 472 | 4.24e-12 | 67.4 |
| MS.gene050640.t1 | MTR_5g042920 | 46.269 | 67 | 33 | 1 | 124 | 190 | 319 | 382 | 1.76e-12 | 68.2 |
| MS.gene050640.t1 | MTR_5g042920 | 35.652 | 115 | 65 | 4 | 125 | 239 | 151 | 256 | 5.78e-11 | 63.5 |
| MS.gene050640.t1 | MTR_7g100510 | 31.667 | 120 | 78 | 2 | 126 | 245 | 190 | 305 | 1.93e-12 | 68.2 |
| MS.gene050640.t1 | MTR_1g099600 | 44.928 | 69 | 32 | 2 | 126 | 194 | 186 | 248 | 2.64e-12 | 67.0 |
| MS.gene050640.t1 | MTR_7g062220 | 48.684 | 76 | 31 | 3 | 108 | 182 | 110 | 178 | 2.84e-12 | 67.0 |
| MS.gene050640.t1 | MTR_5g094430 | 44.776 | 67 | 34 | 1 | 124 | 190 | 363 | 426 | 3.15e-12 | 67.8 |
| MS.gene050640.t1 | MTR_5g094430 | 45.833 | 72 | 33 | 3 | 123 | 194 | 198 | 263 | 5.00e-12 | 67.0 |
| MS.gene050640.t1 | MTR_5g073620 | 43.284 | 67 | 38 | 0 | 125 | 191 | 672 | 738 | 3.60e-12 | 67.8 |
| MS.gene050640.t1 | MTR_3g056100 | 47.143 | 70 | 31 | 3 | 125 | 194 | 243 | 306 | 4.03e-12 | 67.4 |
| MS.gene050640.t1 | MTR_3g056100 | 44.776 | 67 | 34 | 1 | 124 | 190 | 401 | 464 | 6.18e-12 | 67.0 |
| MS.gene050640.t1 | MTR_5g094430 | 44.776 | 67 | 34 | 1 | 124 | 190 | 251 | 314 | 4.14e-12 | 67.0 |
| MS.gene050640.t1 | MTR_5g094430 | 45.833 | 72 | 33 | 3 | 123 | 194 | 86 | 151 | 5.49e-12 | 66.6 |
| MS.gene050640.t1 | MTR_3g108960 | 52.632 | 57 | 25 | 1 | 126 | 182 | 315 | 369 | 4.19e-12 | 67.0 |
| MS.gene050640.t1 | MTR_3g056100 | 47.143 | 70 | 31 | 3 | 125 | 194 | 243 | 306 | 4.23e-12 | 67.4 |
| MS.gene050640.t1 | MTR_3g056100 | 44.776 | 67 | 34 | 1 | 124 | 190 | 414 | 477 | 6.84e-12 | 66.6 |
| MS.gene050640.t1 | MTR_5g094430 | 44.776 | 67 | 34 | 1 | 124 | 190 | 229 | 292 | 4.37e-12 | 67.0 |
| MS.gene050640.t1 | MTR_5g094430 | 45.833 | 72 | 33 | 3 | 123 | 194 | 64 | 129 | 6.35e-12 | 66.6 |
| MS.gene050640.t1 | MTR_3g056100 | 47.143 | 70 | 31 | 3 | 125 | 194 | 99 | 162 | 5.07e-12 | 67.0 |
| MS.gene050640.t1 | MTR_3g056100 | 44.776 | 67 | 34 | 1 | 124 | 190 | 270 | 333 | 8.91e-12 | 66.2 |
| MS.gene050640.t1 | MTR_8g007270 | 45.070 | 71 | 36 | 1 | 112 | 182 | 141 | 208 | 5.07e-12 | 65.1 |
| MS.gene050640.t1 | MTR_3g056100 | 47.143 | 70 | 31 | 3 | 125 | 194 | 99 | 162 | 5.16e-12 | 66.6 |
| MS.gene050640.t1 | MTR_3g056100 | 44.776 | 67 | 34 | 1 | 124 | 190 | 257 | 320 | 8.67e-12 | 66.2 |
| MS.gene050640.t1 | MTR_0117s0040 | 52.632 | 57 | 25 | 1 | 126 | 182 | 75 | 129 | 5.99e-12 | 65.1 |
| MS.gene050640.t1 | MTR_7g080020 | 44.615 | 65 | 32 | 2 | 125 | 189 | 280 | 340 | 1.05e-11 | 66.2 |
| MS.gene050640.t1 | MTR_4g122530 | 45.312 | 64 | 32 | 1 | 124 | 187 | 207 | 267 | 1.14e-11 | 65.9 |
| MS.gene050640.t1 | MTR_5g074400 | 44.776 | 67 | 34 | 1 | 124 | 190 | 419 | 482 | 4.20e-11 | 64.3 |
| MS.gene050640.t1 | MTR_2g088000 | 48.485 | 66 | 32 | 1 | 124 | 189 | 348 | 411 | 5.45e-11 | 63.9 |
| MS.gene050640.t1 | MTR_1g015140 | 38.824 | 85 | 45 | 3 | 107 | 189 | 82 | 161 | 7.91e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050640.t1 | AT4G11070 | 38.728 | 346 | 147 | 13 | 3 | 324 | 2 | 306 | 8.27e-51 | 171 |
| MS.gene050640.t1 | AT4G11070 | 37.117 | 326 | 148 | 11 | 3 | 324 | 2 | 274 | 2.10e-46 | 159 |
| MS.gene050640.t1 | AT5G24110 | 37.066 | 259 | 120 | 10 | 12 | 265 | 17 | 237 | 7.87e-43 | 150 |
| MS.gene050640.t1 | AT4G23810 | 42.478 | 226 | 85 | 7 | 11 | 195 | 13 | 234 | 9.31e-43 | 150 |
| MS.gene050640.t1 | AT2G46400 | 37.542 | 301 | 153 | 10 | 12 | 309 | 8 | 276 | 9.49e-41 | 144 |
| MS.gene050640.t1 | AT3G56400 | 32.487 | 197 | 99 | 5 | 3 | 184 | 2 | 179 | 2.49e-26 | 106 |
| MS.gene050640.t1 | AT2G40750 | 27.574 | 272 | 161 | 7 | 5 | 244 | 8 | 275 | 2.88e-23 | 99.0 |
| MS.gene050640.t1 | AT2G40740 | 42.202 | 109 | 61 | 1 | 99 | 205 | 145 | 253 | 3.22e-22 | 95.1 |
| MS.gene050640.t1 | AT2G40740 | 42.202 | 109 | 61 | 1 | 99 | 205 | 154 | 262 | 3.75e-22 | 95.1 |
| MS.gene050640.t1 | AT5G45260 | 47.423 | 97 | 41 | 4 | 99 | 195 | 1188 | 1274 | 8.26e-19 | 88.2 |
| MS.gene050640.t1 | AT1G66550 | 29.282 | 181 | 90 | 6 | 16 | 184 | 13 | 167 | 5.96e-16 | 77.0 |
| MS.gene050640.t1 | AT1G66600 | 40.909 | 88 | 45 | 1 | 104 | 184 | 75 | 162 | 2.64e-15 | 74.7 |
| MS.gene050640.t1 | AT5G52830 | 54.839 | 62 | 26 | 1 | 126 | 187 | 166 | 225 | 3.06e-15 | 75.9 |
| MS.gene050640.t1 | AT1G29280 | 53.226 | 62 | 25 | 2 | 126 | 187 | 75 | 132 | 6.17e-15 | 73.9 |
| MS.gene050640.t1 | AT1G66550 | 38.636 | 88 | 47 | 1 | 104 | 184 | 75 | 162 | 1.26e-14 | 73.2 |
| MS.gene050640.t1 | AT4G31550 | 44.048 | 84 | 43 | 2 | 99 | 182 | 221 | 300 | 1.88e-14 | 73.6 |
| MS.gene050640.t1 | AT5G49520 | 50.000 | 64 | 29 | 1 | 124 | 187 | 220 | 280 | 2.22e-14 | 73.9 |
| MS.gene050640.t1 | AT4G31550 | 54.386 | 57 | 24 | 1 | 126 | 182 | 247 | 301 | 4.90e-14 | 72.4 |
| MS.gene050640.t1 | AT4G01250 | 51.613 | 62 | 26 | 2 | 126 | 187 | 129 | 186 | 8.55e-14 | 71.2 |
| MS.gene050640.t1 | AT2G30590 | 50.794 | 63 | 27 | 2 | 126 | 188 | 314 | 372 | 9.53e-14 | 72.0 |
| MS.gene050640.t1 | AT1G30650 | 49.275 | 69 | 29 | 3 | 126 | 194 | 218 | 280 | 1.00e-13 | 72.0 |
| MS.gene050640.t1 | AT2G34830 | 35.938 | 128 | 58 | 6 | 78 | 187 | 152 | 273 | 1.52e-13 | 71.6 |
| MS.gene050640.t1 | AT1G66560 | 46.667 | 60 | 32 | 0 | 125 | 184 | 103 | 162 | 1.65e-13 | 69.7 |
| MS.gene050640.t1 | AT2G34830 | 35.938 | 128 | 58 | 6 | 78 | 187 | 161 | 282 | 1.81e-13 | 71.2 |
| MS.gene050640.t1 | AT1G69310 | 40.476 | 84 | 47 | 1 | 99 | 182 | 121 | 201 | 4.12e-13 | 69.3 |
| MS.gene050640.t1 | AT1G69310 | 40.476 | 84 | 47 | 1 | 99 | 182 | 121 | 201 | 4.12e-13 | 69.3 |
| MS.gene050640.t1 | AT1G69310 | 40.476 | 84 | 47 | 1 | 99 | 182 | 121 | 201 | 4.12e-13 | 69.3 |
| MS.gene050640.t1 | AT2G24570 | 54.386 | 57 | 24 | 1 | 126 | 182 | 244 | 298 | 4.13e-13 | 69.7 |
| MS.gene050640.t1 | AT2G37260 | 35.345 | 116 | 60 | 3 | 72 | 182 | 218 | 323 | 5.89e-13 | 69.3 |
| MS.gene050640.t1 | AT2G37260 | 35.345 | 116 | 60 | 3 | 72 | 182 | 216 | 321 | 5.94e-13 | 69.3 |
| MS.gene050640.t1 | AT2G37260 | 35.345 | 116 | 60 | 3 | 72 | 182 | 298 | 403 | 6.43e-13 | 69.7 |
| MS.gene050640.t1 | AT5G13080 | 51.562 | 64 | 26 | 2 | 124 | 187 | 66 | 124 | 8.42e-13 | 65.5 |
| MS.gene050640.t1 | AT5G41570 | 43.038 | 79 | 40 | 2 | 112 | 190 | 85 | 158 | 8.98e-13 | 66.2 |
| MS.gene050640.t1 | AT3G58710 | 43.011 | 93 | 45 | 4 | 99 | 187 | 40 | 128 | 9.50e-13 | 67.8 |
| MS.gene050640.t1 | AT4G24240 | 41.667 | 84 | 45 | 2 | 99 | 182 | 257 | 336 | 1.12e-12 | 68.6 |
| MS.gene050640.t1 | AT1G29860 | 40.476 | 84 | 45 | 2 | 110 | 193 | 121 | 199 | 1.16e-12 | 67.8 |
| MS.gene050640.t1 | AT1G64000 | 40.659 | 91 | 43 | 3 | 112 | 196 | 101 | 186 | 1.20e-12 | 66.2 |
| MS.gene050640.t1 | AT2G23320 | 50.877 | 57 | 26 | 1 | 126 | 182 | 241 | 295 | 1.20e-12 | 68.2 |
| MS.gene050640.t1 | AT3G58710 | 50.000 | 62 | 27 | 2 | 126 | 187 | 72 | 129 | 1.46e-12 | 67.4 |
| MS.gene050640.t1 | AT2G46130 | 48.438 | 64 | 28 | 2 | 124 | 187 | 29 | 87 | 1.56e-12 | 63.9 |
| MS.gene050640.t1 | AT2G47260 | 37.778 | 90 | 53 | 1 | 98 | 187 | 147 | 233 | 1.59e-12 | 67.8 |
| MS.gene050640.t1 | AT4G18170 | 35.238 | 105 | 63 | 2 | 83 | 187 | 130 | 229 | 1.60e-12 | 67.8 |
| MS.gene050640.t1 | AT5G28650 | 52.632 | 57 | 25 | 1 | 126 | 182 | 263 | 317 | 1.73e-12 | 67.8 |
| MS.gene050640.t1 | AT4G23550 | 46.774 | 62 | 31 | 1 | 121 | 182 | 136 | 195 | 1.84e-12 | 67.4 |
| MS.gene050640.t1 | AT1G80590 | 39.241 | 79 | 45 | 1 | 112 | 187 | 69 | 147 | 2.70e-12 | 66.2 |
| MS.gene050640.t1 | AT2G44745 | 45.070 | 71 | 36 | 1 | 112 | 182 | 132 | 199 | 4.59e-12 | 65.1 |
| MS.gene050640.t1 | AT5G01900 | 43.750 | 64 | 36 | 0 | 126 | 189 | 111 | 174 | 5.00e-12 | 65.9 |
| MS.gene050640.t1 | AT4G26640 | 45.714 | 70 | 32 | 3 | 125 | 194 | 171 | 234 | 5.91e-12 | 67.0 |
| MS.gene050640.t1 | AT4G26640 | 44.776 | 67 | 34 | 1 | 124 | 190 | 340 | 403 | 8.49e-12 | 66.2 |
| MS.gene050640.t1 | AT3G01970 | 48.529 | 68 | 30 | 2 | 124 | 191 | 64 | 126 | 6.11e-12 | 63.2 |
| MS.gene050640.t1 | AT4G26640 | 45.714 | 70 | 32 | 3 | 125 | 194 | 211 | 274 | 6.66e-12 | 66.6 |
| MS.gene050640.t1 | AT4G26640 | 44.776 | 67 | 34 | 1 | 124 | 190 | 380 | 443 | 1.04e-11 | 66.2 |
| MS.gene050640.t1 | AT4G26640 | 45.714 | 70 | 32 | 3 | 125 | 194 | 139 | 202 | 7.34e-12 | 66.6 |
| MS.gene050640.t1 | AT4G26640 | 44.776 | 67 | 34 | 1 | 124 | 190 | 308 | 371 | 1.13e-11 | 65.9 |
| MS.gene050640.t1 | AT5G46350 | 46.875 | 64 | 29 | 2 | 124 | 187 | 182 | 240 | 7.54e-12 | 65.9 |
| MS.gene050640.t1 | AT4G26640 | 45.070 | 71 | 33 | 3 | 124 | 194 | 34 | 98 | 7.68e-12 | 66.2 |
| MS.gene050640.t1 | AT4G26640 | 44.776 | 67 | 34 | 1 | 124 | 190 | 204 | 267 | 1.25e-11 | 65.5 |
| MS.gene050640.t1 | AT4G26640 | 45.070 | 71 | 33 | 3 | 124 | 194 | 34 | 98 | 7.68e-12 | 66.2 |
| MS.gene050640.t1 | AT4G26640 | 44.776 | 67 | 34 | 1 | 124 | 190 | 204 | 267 | 1.25e-11 | 65.5 |
| MS.gene050640.t1 | AT4G26640 | 45.070 | 71 | 33 | 3 | 124 | 194 | 34 | 98 | 7.68e-12 | 66.2 |
| MS.gene050640.t1 | AT4G26640 | 44.776 | 67 | 34 | 1 | 124 | 190 | 204 | 267 | 1.25e-11 | 65.5 |
| MS.gene050640.t1 | AT4G26640 | 45.070 | 71 | 33 | 3 | 124 | 194 | 34 | 98 | 7.68e-12 | 66.2 |
| MS.gene050640.t1 | AT4G26640 | 44.776 | 67 | 34 | 1 | 124 | 190 | 204 | 267 | 1.25e-11 | 65.5 |
| MS.gene050640.t1 | AT3G01080 | 48.438 | 64 | 29 | 2 | 125 | 188 | 205 | 264 | 7.78e-12 | 65.9 |
| MS.gene050640.t1 | AT3G04670 | 50.877 | 57 | 26 | 1 | 126 | 182 | 263 | 317 | 8.40e-12 | 65.9 |
| MS.gene050640.t1 | AT3G62340 | 48.438 | 64 | 30 | 1 | 124 | 187 | 117 | 177 | 8.79e-12 | 65.1 |
| MS.gene050640.t1 | AT4G26440 | 50.794 | 63 | 27 | 2 | 125 | 187 | 178 | 236 | 8.92e-12 | 66.2 |
| MS.gene050640.t1 | AT4G26440 | 46.269 | 67 | 33 | 1 | 124 | 190 | 371 | 434 | 2.09e-11 | 65.1 |
| MS.gene050640.t1 | AT1G13960 | 46.875 | 64 | 30 | 2 | 125 | 188 | 229 | 288 | 9.17e-12 | 66.2 |
| MS.gene050640.t1 | AT1G13960 | 47.458 | 59 | 28 | 1 | 124 | 182 | 408 | 463 | 1.25e-11 | 65.9 |
| MS.gene050640.t1 | AT3G01080 | 46.970 | 66 | 31 | 2 | 125 | 190 | 205 | 266 | 1.19e-11 | 65.9 |
| MS.gene050640.t1 | AT2G25000 | 44.776 | 67 | 35 | 1 | 123 | 189 | 101 | 165 | 1.20e-11 | 63.9 |
| MS.gene050640.t1 | AT2G25000 | 44.776 | 67 | 35 | 1 | 123 | 189 | 101 | 165 | 1.20e-11 | 63.9 |
| MS.gene050640.t1 | AT2G25000 | 44.776 | 67 | 35 | 1 | 123 | 189 | 123 | 187 | 1.23e-11 | 64.3 |
| MS.gene050640.t1 | AT2G03340 | 45.455 | 66 | 32 | 2 | 125 | 190 | 250 | 311 | 1.24e-11 | 65.9 |
| MS.gene050640.t1 | AT2G03340 | 43.284 | 67 | 35 | 1 | 124 | 190 | 414 | 477 | 2.55e-11 | 65.1 |
| MS.gene050640.t1 | AT3G01080 | 46.970 | 66 | 31 | 2 | 125 | 190 | 167 | 228 | 1.50e-11 | 65.5 |
| MS.gene050640.t1 | AT2G25000 | 44.776 | 67 | 35 | 1 | 123 | 189 | 144 | 208 | 1.53e-11 | 64.3 |
| MS.gene050640.t1 | AT2G04880 | 44.304 | 79 | 36 | 4 | 119 | 197 | 105 | 175 | 1.76e-11 | 65.5 |
| MS.gene050640.t1 | AT2G04880 | 40.299 | 67 | 37 | 1 | 124 | 190 | 306 | 369 | 7.69e-11 | 63.5 |
| MS.gene050640.t1 | AT2G04880 | 44.304 | 79 | 36 | 4 | 119 | 197 | 105 | 175 | 1.78e-11 | 65.5 |
| MS.gene050640.t1 | AT2G04880 | 40.299 | 67 | 37 | 1 | 124 | 190 | 282 | 345 | 6.12e-11 | 63.5 |
| MS.gene050640.t1 | AT1G13960 | 46.875 | 64 | 30 | 2 | 125 | 188 | 76 | 135 | 1.83e-11 | 65.1 |
| MS.gene050640.t1 | AT1G13960 | 47.458 | 59 | 28 | 1 | 124 | 182 | 255 | 310 | 1.85e-11 | 64.7 |
| MS.gene050640.t1 | AT4G39410 | 41.176 | 85 | 46 | 2 | 98 | 182 | 197 | 277 | 3.51e-11 | 63.5 |
| MS.gene050640.t1 | AT4G01720 | 37.963 | 108 | 60 | 4 | 81 | 187 | 196 | 297 | 3.91e-11 | 64.3 |
| MS.gene050640.t1 | AT5G45050 | 42.500 | 80 | 40 | 3 | 108 | 187 | 1026 | 1099 | 4.85e-11 | 64.3 |
| MS.gene050640.t1 | AT5G45050 | 42.500 | 80 | 40 | 3 | 108 | 187 | 1165 | 1238 | 4.86e-11 | 64.7 |
| MS.gene050640.t1 | AT5G45050 | 42.500 | 80 | 40 | 3 | 108 | 187 | 1137 | 1210 | 5.06e-11 | 64.3 |
| MS.gene050640.t1 | AT5G07100 | 47.458 | 59 | 28 | 1 | 124 | 182 | 233 | 288 | 5.51e-11 | 63.2 |
| MS.gene050640.t1 | AT5G07100 | 42.857 | 70 | 35 | 2 | 125 | 194 | 117 | 181 | 8.44e-11 | 62.4 |
| MS.gene050640.t1 | AT5G07100 | 47.458 | 59 | 28 | 1 | 124 | 182 | 140 | 195 | 6.54e-11 | 61.6 |
| MS.gene050640.t1 | AT5G07100 | 42.857 | 70 | 35 | 2 | 125 | 194 | 24 | 88 | 8.63e-11 | 61.2 |
| MS.gene050640.t1 | AT5G07100 | 47.458 | 59 | 28 | 1 | 124 | 182 | 140 | 195 | 6.54e-11 | 61.6 |
| MS.gene050640.t1 | AT5G07100 | 42.857 | 70 | 35 | 2 | 125 | 194 | 24 | 88 | 8.63e-11 | 61.2 |
| MS.gene050640.t1 | AT5G07100 | 47.458 | 59 | 28 | 1 | 124 | 182 | 140 | 195 | 6.54e-11 | 61.6 |
| MS.gene050640.t1 | AT5G07100 | 42.857 | 70 | 35 | 2 | 125 | 194 | 24 | 88 | 8.63e-11 | 61.2 |
| MS.gene050640.t1 | AT5G07100 | 47.458 | 59 | 28 | 1 | 124 | 182 | 140 | 195 | 6.54e-11 | 61.6 |
| MS.gene050640.t1 | AT5G07100 | 42.857 | 70 | 35 | 2 | 125 | 194 | 24 | 88 | 8.63e-11 | 61.2 |
| MS.gene050640.t1 | AT2G21900 | 40.299 | 67 | 37 | 1 | 123 | 189 | 107 | 170 | 7.40e-11 | 61.2 |
| MS.gene050640.t1 | AT2G40740 | 45.902 | 61 | 33 | 0 | 145 | 205 | 149 | 209 | 8.15e-11 | 62.0 |
| MS.gene050640.t1 | AT5G43290 | 40.541 | 111 | 50 | 5 | 120 | 224 | 109 | 209 | 8.77e-11 | 62.0 |
Find 69 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTATGATGACCTCACTTT+TGG | 0.188414 | 7.3:-1048144 | None:intergenic |
| TCAACATAGTAAGTGCTTTC+TGG | 0.207919 | 7.3:-1048046 | None:intergenic |
| TCCCTCAAAGTTAAAGATAA+AGG | 0.227041 | 7.3:+1049325 | MS.gene050640:CDS |
| CTCAAGCTAAGCCTTTAAAA+AGG | 0.231958 | 7.3:+1049297 | MS.gene050640:CDS |
| ATTCTGAAGTTGGTCCATTT+TGG | 0.232813 | 7.3:-1049583 | None:intergenic |
| CAAGAATTCATTGGTTTCAT+TGG | 0.239108 | 7.3:-1048000 | None:intergenic |
| TTCACTTGTTCCTTCCATTT+AGG | 0.269402 | 7.3:-1048500 | None:intergenic |
| CAATTCACCAATCCTTGATT+TGG | 0.271018 | 7.3:+1049646 | MS.gene050640:CDS |
| CATTGGATGATATAATTATA+TGG | 0.275590 | 7.3:-1047983 | None:intergenic |
| AGGATTATCTGAAGGGTCTT+TGG | 0.285031 | 7.3:+1048538 | MS.gene050640:CDS |
| CCGAGGGAAAATACCCTCTT+TGG | 0.291656 | 7.3:-1049459 | None:intergenic |
| CTTTCCTTGGATTAATTCAT+TGG | 0.302740 | 7.3:-1047937 | None:intergenic |
| CAAATCAAGGATTGGTGAAT+TGG | 0.310097 | 7.3:-1049645 | None:intergenic |
| CCCTCAAAGTTAAAGATAAA+GGG | 0.333691 | 7.3:+1049326 | MS.gene050640:CDS |
| CCCTTTATCTTTAACTTTGA+GGG | 0.337711 | 7.3:-1049326 | None:intergenic |
| GCAGAAAGAGCATGCCTAAA+TGG | 0.338464 | 7.3:+1048486 | MS.gene050640:intron |
| TATGGTCAAAAGGATATTCT+TGG | 0.360560 | 7.3:+1048584 | MS.gene050640:CDS |
| GAATATAGCTGGAGAAAATA+TGG | 0.367378 | 7.3:+1048566 | MS.gene050640:CDS |
| GCCCTTTATCTTTAACTTTG+AGG | 0.367772 | 7.3:-1049327 | None:intergenic |
| TTTGAACCTGCTTTGTTGCT+AGG | 0.370195 | 7.3:-1049211 | None:intergenic |
| TAAGTTACCTCAATTATTGT+TGG | 0.376442 | 7.3:-1049248 | None:intergenic |
| TGCAATGGATTATGCCAAAA+TGG | 0.376964 | 7.3:+1049569 | MS.gene050640:CDS |
| TTTGTCAATCAAGAATTCAT+TGG | 0.407531 | 7.3:-1048009 | None:intergenic |
| GCTTTGCTAACTCCTTTCCT+TGG | 0.408135 | 7.3:-1047950 | None:intergenic |
| GGACTCTCGTTTGTAAAAGA+AGG | 0.431784 | 7.3:-1048122 | None:intergenic |
| TGGTTTGTCAGAATATCAAT+TGG | 0.434536 | 7.3:+1049544 | MS.gene050640:CDS |
| GTGATATCAGATTCTGAAGT+TGG | 0.434696 | 7.3:-1049593 | None:intergenic |
| TACAGATGCACACATAGAAA+TGG | 0.436912 | 7.3:+1049179 | MS.gene050640:CDS |
| GAAGCAAGATATCCAAATCA+AGG | 0.449238 | 7.3:-1049658 | None:intergenic |
| TTTAACATCAAGTTCTGCCT+TGG | 0.466903 | 7.3:-1049417 | None:intergenic |
| GGTGAATTGGTGACTGAAGT+TGG | 0.470985 | 7.3:-1049632 | None:intergenic |
| CTGGAGAAAATATGGTCAAA+AGG | 0.471109 | 7.3:+1048574 | MS.gene050640:CDS |
| GGAGAGACTAAGACCATTGA+TGG | 0.480847 | 7.3:+1048080 | MS.gene050640:CDS |
| GGTTTGTCAGAATATCAATT+GGG | 0.483451 | 7.3:+1049545 | MS.gene050640:CDS |
| GACCATTGATGGTAAAATGA+AGG | 0.490394 | 7.3:+1048091 | MS.gene050640:CDS |
| TCTGATTCAATTGATGGAGA+AGG | 0.500124 | 7.3:-1049491 | None:intergenic |
| ACAATGCTCTCTTCAAGAAA+AGG | 0.501466 | 7.3:+1048180 | MS.gene050640:CDS |
| GAATATCAATTGGGCTGCAA+TGG | 0.511266 | 7.3:+1049554 | MS.gene050640:CDS |
| CTTTGGATGATGAATATAGC+TGG | 0.515960 | 7.3:+1048555 | MS.gene050640:CDS |
| ATCAGAAAATGAGATAATGA+TGG | 0.516212 | 7.3:+1049508 | MS.gene050640:CDS |
| AAGATATCCAAATCAAGGAT+TGG | 0.520860 | 7.3:-1049653 | None:intergenic |
| TGGATATCTTGCTTCAAAGA+GGG | 0.528389 | 7.3:+1049666 | MS.gene050640:CDS |
| GAGCATTGTGGTTAAACTCC+TGG | 0.533299 | 7.3:-1048166 | None:intergenic |
| TGAAGATCCAACAATAATTG+AGG | 0.540253 | 7.3:+1049241 | MS.gene050640:CDS |
| AGAGACTAGTTTCACTTCCA+AGG | 0.541625 | 7.3:+1049400 | MS.gene050640:CDS |
| GGATATCTTGCTTCAAAGAG+GGG | 0.560641 | 7.3:+1049667 | MS.gene050640:CDS |
| TAGCAACAAAGCAGGTTCAA+AGG | 0.565187 | 7.3:+1049213 | MS.gene050640:CDS |
| AAATATTCAGGAGTATTGAG+AGG | 0.566440 | 7.3:-1049707 | None:intergenic |
| CATAGTAAGTGCTTTCTGGT+AGG | 0.575281 | 7.3:-1048042 | None:intergenic |
| TTGGATATCTTGCTTCAAAG+AGG | 0.575611 | 7.3:+1049665 | MS.gene050640:CDS |
| CAATGAATTAATCCAAGGAA+AGG | 0.585373 | 7.3:+1047938 | MS.gene050640:CDS |
| CTTACTATGTTGAATGTGAG+AGG | 0.591736 | 7.3:+1048056 | MS.gene050640:CDS |
| AATATTCAGGAGTATTGAGA+GGG | 0.594267 | 7.3:-1049706 | None:intergenic |
| AAAGAGCATGCCTAAATGGA+AGG | 0.601574 | 7.3:+1048490 | MS.gene050640:CDS |
| GTGAAGATTTGCACAAACAC+AGG | 0.602509 | 7.3:+1048518 | MS.gene050640:CDS |
| ATAACCAATGAATTAATCCA+AGG | 0.604601 | 7.3:+1047933 | MS.gene050640:CDS |
| GAGAAGGAAAACAAAACCGA+GGG | 0.610739 | 7.3:-1049475 | None:intergenic |
| AGGGTGCCTAGCAACAAAGC+AGG | 0.623925 | 7.3:+1049205 | MS.gene050640:CDS |
| ACAAACACAGGATTATCTGA+AGG | 0.625241 | 7.3:+1048530 | MS.gene050640:CDS |
| AAGTGAGGTCATCATAGACC+AGG | 0.627405 | 7.3:+1048148 | MS.gene050640:CDS |
| CAAACACAGGATTATCTGAA+GGG | 0.645284 | 7.3:+1048531 | MS.gene050640:CDS |
| AAACGAGAGTCCCAAAAGTG+AGG | 0.654222 | 7.3:+1048133 | MS.gene050640:CDS |
| ATAATTGAGGTAACTTACAG+AGG | 0.655185 | 7.3:+1049254 | MS.gene050640:CDS |
| GACTTAGAAGAAACCAAAGA+GGG | 0.656480 | 7.3:+1049446 | MS.gene050640:CDS |
| GGAGAAGGAAAACAAAACCG+AGG | 0.666774 | 7.3:-1049476 | None:intergenic |
| ACTATGTTGAATGTGAGAGG+AGG | 0.670945 | 7.3:+1048059 | MS.gene050640:CDS |
| TGACTTAGAAGAAACCAAAG+AGG | 0.672282 | 7.3:+1049445 | MS.gene050640:CDS |
| TGCACACATAGAAATGGACA+AGG | 0.697085 | 7.3:+1049185 | MS.gene050640:CDS |
| GCACACATAGAAATGGACAA+GGG | 0.758330 | 7.3:+1049186 | MS.gene050640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTTTTTGTTAAATATTTA+AGG | + | chr7.3:1048859-1048878 | MS.gene050640:intron | 10.0% |
| !!! | ATTAATAATATTTGTTTTAG+TGG | + | chr7.3:1048684-1048703 | MS.gene050640:intron | 10.0% |
| !! | AAATGATACTTGTAATAAAA+CGG | + | chr7.3:1048355-1048374 | MS.gene050640:intron | 15.0% |
| !! | CTATGTTAATAAAAAAGTTA+AGG | - | chr7.3:1048281-1048300 | None:intergenic | 15.0% |
| !!! | AAATGTTTTCACAATTTTAT+TGG | + | chr7.3:1049137-1049156 | MS.gene050640:intron | 15.0% |
| !! | CATTGGATGATATAATTATA+TGG | - | chr7.3:1047986-1048005 | None:intergenic | 20.0% |
| !! | TATGTAATCATTTGAATTTG+TGG | + | chr7.3:1048462-1048481 | MS.gene050640:intron | 20.0% |
| !!! | ATATTGCTCAACTATTTTTT+TGG | + | chr7.3:1048820-1048839 | MS.gene050640:intron | 20.0% |
| !!! | TGCACTATTTGTTAATAATA+AGG | + | chr7.3:1048929-1048948 | MS.gene050640:intron | 20.0% |
| !!! | TTCAACATTTGTATTGTTTT+CGG | + | chr7.3:1049028-1049047 | MS.gene050640:intron | 20.0% |
| !!! | TTTTCACAATTTTATTGGTT+TGG | + | chr7.3:1049142-1049161 | MS.gene050640:intron | 20.0% |
| ! | ATAACCAATGAATTAATCCA+AGG | + | chr7.3:1047933-1047952 | MS.gene050640:CDS | 25.0% |
| ! | ATCAGAAAATGAGATAATGA+TGG | + | chr7.3:1049508-1049527 | MS.gene050640:CDS | 25.0% |
| ! | ATCTTGAGTAATGAAATAGA+AGG | - | chr7.3:1048908-1048927 | None:intergenic | 25.0% |
| ! | TAAGTTACCTCAATTATTGT+TGG | - | chr7.3:1049251-1049270 | None:intergenic | 25.0% |
| ! | TTTGTCAATCAAGAATTCAT+TGG | - | chr7.3:1048012-1048031 | None:intergenic | 25.0% |
| !! | ATAGTTGAGCAATATTGATT+TGG | - | chr7.3:1048815-1048834 | None:intergenic | 25.0% |
| !! | TCATTTTCTGATTCAATTGA+TGG | - | chr7.3:1049500-1049519 | None:intergenic | 25.0% |
| !!! | AAGCGTTTTGAATTTGATAT+AGG | + | chr7.3:1048722-1048741 | MS.gene050640:intron | 25.0% |
| !!! | ATGATGGAATCAAACTTTTT+TGG | + | chr7.3:1049524-1049543 | MS.gene050640:CDS | 25.0% |
| !!! | CAATATTGATTTGGTTAACA+GGG | - | chr7.3:1048806-1048825 | None:intergenic | 25.0% |
| AAGATATCCAAATCAAGGAT+TGG | - | chr7.3:1049656-1049675 | None:intergenic | 30.0% | |
| ATAATTGAGGTAACTTACAG+AGG | + | chr7.3:1049254-1049273 | MS.gene050640:CDS | 30.0% | |
| CAATGAATTAATCCAAGGAA+AGG | + | chr7.3:1047938-1047957 | MS.gene050640:CDS | 30.0% | |
| CCCTCAAAGTTAAAGATAAA+GGG | + | chr7.3:1049326-1049345 | MS.gene050640:CDS | 30.0% | |
| CTTTCCTTGGATTAATTCAT+TGG | - | chr7.3:1047940-1047959 | None:intergenic | 30.0% | |
| GAATATAGCTGGAGAAAATA+TGG | + | chr7.3:1048566-1048585 | MS.gene050640:CDS | 30.0% | |
| GGTTTGTCAGAATATCAATT+GGG | + | chr7.3:1049545-1049564 | MS.gene050640:CDS | 30.0% | |
| TATGGTCAAAAGGATATTCT+TGG | + | chr7.3:1048584-1048603 | MS.gene050640:CDS | 30.0% | |
| TCCCTCAAAGTTAAAGATAA+AGG | + | chr7.3:1049325-1049344 | MS.gene050640:CDS | 30.0% | |
| TGAAGATCCAACAATAATTG+AGG | + | chr7.3:1049241-1049260 | MS.gene050640:CDS | 30.0% | |
| ! | AGAAGACAAAGTGCTTATTA+AGG | + | chr7.3:1048978-1048997 | MS.gene050640:intron | 30.0% |
| ! | ATCCTTCATTTTACCATCAA+TGG | - | chr7.3:1048096-1048115 | None:intergenic | 30.0% |
| ! | CCCTTTATCTTTAACTTTGA+GGG | - | chr7.3:1049329-1049348 | None:intergenic | 30.0% |
| ! | TCAAGCTAAGCCTTTAAAAA+GGG | + | chr7.3:1049298-1049317 | MS.gene050640:CDS | 30.0% |
| ! | TGGTTTGTCAGAATATCAAT+TGG | + | chr7.3:1049544-1049563 | MS.gene050640:CDS | 30.0% |
| !! | AAATATTCAGGAGTATTGAG+AGG | - | chr7.3:1049710-1049729 | None:intergenic | 30.0% |
| !! | AATATTCAGGAGTATTGAGA+GGG | - | chr7.3:1049709-1049728 | None:intergenic | 30.0% |
| !! | CAAGAATTCATTGGTTTCAT+TGG | - | chr7.3:1048003-1048022 | None:intergenic | 30.0% |
| !! | GCAATATTGATTTGGTTAAC+AGG | - | chr7.3:1048807-1048826 | None:intergenic | 30.0% |
| ACAAACACAGGATTATCTGA+AGG | + | chr7.3:1048530-1048549 | MS.gene050640:CDS | 35.0% | |
| ACAATGCTCTCTTCAAGAAA+AGG | + | chr7.3:1048180-1048199 | MS.gene050640:CDS | 35.0% | |
| ACTGAAATACGTTCAAGCTA+GGG | - | chr7.3:1048443-1048462 | None:intergenic | 35.0% | |
| CAAACACAGGATTATCTGAA+GGG | + | chr7.3:1048531-1048550 | MS.gene050640:CDS | 35.0% | |
| CAATTCACCAATCCTTGATT+TGG | + | chr7.3:1049646-1049665 | MS.gene050640:CDS | 35.0% | |
| CTGGAGAAAATATGGTCAAA+AGG | + | chr7.3:1048574-1048593 | MS.gene050640:CDS | 35.0% | |
| CTTACTATGTTGAATGTGAG+AGG | + | chr7.3:1048056-1048075 | MS.gene050640:CDS | 35.0% | |
| CTTTGGATGATGAATATAGC+TGG | + | chr7.3:1048555-1048574 | MS.gene050640:CDS | 35.0% | |
| GAAGCAAGATATCCAAATCA+AGG | - | chr7.3:1049661-1049680 | None:intergenic | 35.0% | |
| GACTTAGAAGAAACCAAAGA+GGG | + | chr7.3:1049446-1049465 | MS.gene050640:CDS | 35.0% | |
| TACAGATGCACACATAGAAA+TGG | + | chr7.3:1049179-1049198 | MS.gene050640:CDS | 35.0% | |
| TACTGAAATACGTTCAAGCT+AGG | - | chr7.3:1048444-1048463 | None:intergenic | 35.0% | |
| TCAACATAGTAAGTGCTTTC+TGG | - | chr7.3:1048049-1048068 | None:intergenic | 35.0% | |
| TCTGATTCAATTGATGGAGA+AGG | - | chr7.3:1049494-1049513 | None:intergenic | 35.0% | |
| TGACTTAGAAGAAACCAAAG+AGG | + | chr7.3:1049445-1049464 | MS.gene050640:CDS | 35.0% | |
| TGGATATCTTGCTTCAAAGA+GGG | + | chr7.3:1049666-1049685 | MS.gene050640:CDS | 35.0% | |
| TTCACTTGTTCCTTCCATTT+AGG | - | chr7.3:1048503-1048522 | None:intergenic | 35.0% | |
| TTCATGTGTGTGAATTGTCA+AGG | + | chr7.3:1048411-1048430 | MS.gene050640:intron | 35.0% | |
| TTGGATATCTTGCTTCAAAG+AGG | + | chr7.3:1049665-1049684 | MS.gene050640:CDS | 35.0% | |
| TTTAACATCAAGTTCTGCCT+TGG | - | chr7.3:1049420-1049439 | None:intergenic | 35.0% | |
| ! | CAAATCAAGGATTGGTGAAT+TGG | - | chr7.3:1049648-1049667 | None:intergenic | 35.0% |
| ! | CTCAAGCTAAGCCTTTAAAA+AGG | + | chr7.3:1049297-1049316 | MS.gene050640:CDS | 35.0% |
| ! | GACCATTGATGGTAAAATGA+AGG | + | chr7.3:1048091-1048110 | MS.gene050640:CDS | 35.0% |
| ! | GAGGGAAATTCCCTTTTTAA+AGG | - | chr7.3:1049311-1049330 | None:intergenic | 35.0% |
| ! | GCCCTTTATCTTTAACTTTG+AGG | - | chr7.3:1049330-1049349 | None:intergenic | 35.0% |
| ! | TTCTTGGAGCTAAGTTTTCA+AGG | + | chr7.3:1048600-1048619 | MS.gene050640:CDS | 35.0% |
| !! | CTTTTTAAAGGCTTAGCTTG+AGG | - | chr7.3:1049299-1049318 | None:intergenic | 35.0% |
| !! | GTGATATCAGATTCTGAAGT+TGG | - | chr7.3:1049596-1049615 | None:intergenic | 35.0% |
| !! | TCTATGATGACCTCACTTTT+GGG | - | chr7.3:1048146-1048165 | None:intergenic | 35.0% |
| !! | TGCAATGGATTATGCCAAAA+TGG | + | chr7.3:1049569-1049588 | MS.gene050640:CDS | 35.0% |
| !! | TTTATTGGTTTGGATTGCAG+AGG | + | chr7.3:1049152-1049171 | MS.gene050640:intron | 35.0% |
| !!! | ATTCTGAAGTTGGTCCATTT+TGG | - | chr7.3:1049586-1049605 | None:intergenic | 35.0% |
| !!! | TTTTCTTGAAGAGAGCATTG+TGG | - | chr7.3:1048181-1048200 | None:intergenic | 35.0% |
| ACTATGTTGAATGTGAGAGG+AGG | + | chr7.3:1048059-1048078 | MS.gene050640:CDS | 40.0% | |
| AGGATTATCTGAAGGGTCTT+TGG | + | chr7.3:1048538-1048557 | MS.gene050640:CDS | 40.0% | |
| GAATATCAATTGGGCTGCAA+TGG | + | chr7.3:1049554-1049573 | MS.gene050640:CDS | 40.0% | |
| GAGAAGGAAAACAAAACCGA+GGG | - | chr7.3:1049478-1049497 | None:intergenic | 40.0% | |
| GCACACATAGAAATGGACAA+GGG | + | chr7.3:1049186-1049205 | MS.gene050640:CDS | 40.0% | |
| GGACTCTCGTTTGTAAAAGA+AGG | - | chr7.3:1048125-1048144 | None:intergenic | 40.0% | |
| GGATATCTTGCTTCAAAGAG+GGG | + | chr7.3:1049667-1049686 | MS.gene050640:CDS | 40.0% | |
| GGTTAACAGGGCTAAAAACA+GGG | - | chr7.3:1048794-1048813 | None:intergenic | 40.0% | |
| GTGAAGATTTGCACAAACAC+AGG | + | chr7.3:1048518-1048537 | MS.gene050640:CDS | 40.0% | |
| TAGCAACAAAGCAGGTTCAA+AGG | + | chr7.3:1049213-1049232 | MS.gene050640:CDS | 40.0% | |
| TGCACACATAGAAATGGACA+AGG | + | chr7.3:1049185-1049204 | MS.gene050640:CDS | 40.0% | |
| TGGTTAACAGGGCTAAAAAC+AGG | - | chr7.3:1048795-1048814 | None:intergenic | 40.0% | |
| TGTAAGCATCTTAGTGTCAC+AGG | + | chr7.3:1048752-1048771 | MS.gene050640:intron | 40.0% | |
| TGTGTGAATTGTCAAGGTCA+AGG | + | chr7.3:1048417-1048436 | MS.gene050640:intron | 40.0% | |
| ! | AAAGAGCATGCCTAAATGGA+AGG | + | chr7.3:1048490-1048509 | MS.gene050640:CDS | 40.0% |
| ! | CATAGTAAGTGCTTTCTGGT+AGG | - | chr7.3:1048045-1048064 | None:intergenic | 40.0% |
| ! | GTCTATGATGACCTCACTTT+TGG | - | chr7.3:1048147-1048166 | None:intergenic | 40.0% |
| ! | TTTGAACCTGCTTTGTTGCT+AGG | - | chr7.3:1049214-1049233 | None:intergenic | 40.0% |
| !! | AGAGACTAGTTTCACTTCCA+AGG | + | chr7.3:1049400-1049419 | MS.gene050640:CDS | 40.0% |
| AAACGAGAGTCCCAAAAGTG+AGG | + | chr7.3:1048133-1048152 | MS.gene050640:CDS | 45.0% | |
| AAGTGAGGTCATCATAGACC+AGG | + | chr7.3:1048148-1048167 | MS.gene050640:CDS | 45.0% | |
| GCTTTGCTAACTCCTTTCCT+TGG | - | chr7.3:1047953-1047972 | None:intergenic | 45.0% | |
| GGAGAAGGAAAACAAAACCG+AGG | - | chr7.3:1049479-1049498 | None:intergenic | 45.0% | |
| GGAGAGACTAAGACCATTGA+TGG | + | chr7.3:1048080-1048099 | MS.gene050640:CDS | 45.0% | |
| ! | GAGCATTGTGGTTAAACTCC+TGG | - | chr7.3:1048169-1048188 | None:intergenic | 45.0% |
| ! | GCAGAAAGAGCATGCCTAAA+TGG | + | chr7.3:1048486-1048505 | MS.gene050640:intron | 45.0% |
| ! | GGTGAATTGGTGACTGAAGT+TGG | - | chr7.3:1049635-1049654 | None:intergenic | 45.0% |
| !!! | CCAAAGAGGGTATTTTCCCT+CGG | + | chr7.3:1049459-1049478 | MS.gene050640:CDS | 45.0% |
| CCGAGGGAAAATACCCTCTT+TGG | - | chr7.3:1049462-1049481 | None:intergenic | 50.0% | |
| ! | AGGGTGCCTAGCAACAAAGC+AGG | + | chr7.3:1049205-1049224 | MS.gene050640:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 1047900 | 1049739 | 1047900 | ID=MS.gene050640 |
| chr7.3 | mRNA | 1047900 | 1049739 | 1047900 | ID=MS.gene050640.t1;Parent=MS.gene050640 |
| chr7.3 | exon | 1047900 | 1048201 | 1047900 | ID=MS.gene050640.t1.exon1;Parent=MS.gene050640.t1 |
| chr7.3 | CDS | 1047900 | 1048201 | 1047900 | ID=cds.MS.gene050640.t1;Parent=MS.gene050640.t1 |
| chr7.3 | exon | 1048490 | 1048621 | 1048490 | ID=MS.gene050640.t1.exon2;Parent=MS.gene050640.t1 |
| chr7.3 | CDS | 1048490 | 1048621 | 1048490 | ID=cds.MS.gene050640.t1;Parent=MS.gene050640.t1 |
| chr7.3 | exon | 1049172 | 1049739 | 1049172 | ID=MS.gene050640.t1.exon3;Parent=MS.gene050640.t1 |
| chr7.3 | CDS | 1049172 | 1049739 | 1049172 | ID=cds.MS.gene050640.t1;Parent=MS.gene050640.t1 |
| Gene Sequence |
| Protein sequence |
