Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22940.t1 | XP_024638902.1 | 98.3 | 416 | 7 | 0 | 1 | 416 | 1 | 416 | 7.50E-248 | 865.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22940.t1 | Q9SFF6 | 69.1 | 418 | 124 | 4 | 1 | 416 | 1 | 415 | 4.3e-175 | 615.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22940.t1 | A0A396JTP5 | 98.3 | 416 | 7 | 0 | 1 | 416 | 1 | 416 | 5.4e-248 | 865.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052066 | MS.gene22940 | 0.817656 | 2.95E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050825 | MS.gene22940 | PPI |
| MS.gene072631 | MS.gene22940 | PPI |
| MS.gene22940 | MS.gene49105 | PPI |
| MS.gene061170 | MS.gene22940 | PPI |
| MS.gene21120 | MS.gene22940 | PPI |
| MS.gene22940 | MS.gene49106 | PPI |
| MS.gene22940 | MS.gene061169 | PPI |
| MS.gene07380 | MS.gene22940 | PPI |
| MS.gene22940 | MS.gene34153 | PPI |
| MS.gene071630 | MS.gene22940 | PPI |
| MS.gene34152 | MS.gene22940 | PPI |
| MS.gene22940 | MS.gene006279 | PPI |
| MS.gene22940 | MS.gene21119 | PPI |
| MS.gene20926 | MS.gene22940 | PPI |
| MS.gene005408 | MS.gene22940 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22940.t1 | MTR_1g085070 | 94.245 | 417 | 8 | 2 | 1 | 416 | 1 | 402 | 0.0 | 811 |
| MS.gene22940.t1 | MTR_7g111280 | 74.641 | 418 | 103 | 2 | 1 | 415 | 1 | 418 | 0.0 | 664 |
| MS.gene22940.t1 | MTR_7g110900 | 71.925 | 374 | 105 | 0 | 42 | 415 | 41 | 414 | 0.0 | 599 |
| MS.gene22940.t1 | MTR_7g110900 | 71.733 | 375 | 106 | 0 | 42 | 416 | 41 | 415 | 0.0 | 597 |
| MS.gene22940.t1 | MTR_4g124320 | 67.542 | 419 | 122 | 2 | 2 | 415 | 11 | 420 | 0.0 | 586 |
| MS.gene22940.t1 | MTR_1g085620 | 69.867 | 375 | 113 | 0 | 42 | 416 | 29 | 403 | 0.0 | 585 |
| MS.gene22940.t1 | MTR_1g085620 | 69.799 | 298 | 90 | 0 | 119 | 416 | 1 | 298 | 3.82e-166 | 468 |
| MS.gene22940.t1 | MTR_8g072010 | 52.815 | 373 | 174 | 1 | 46 | 416 | 20 | 392 | 3.23e-157 | 449 |
| MS.gene22940.t1 | MTR_8g072000 | 49.048 | 420 | 200 | 3 | 1 | 416 | 15 | 424 | 4.93e-156 | 447 |
| MS.gene22940.t1 | MTR_8g072000 | 53.369 | 371 | 171 | 1 | 48 | 416 | 23 | 393 | 2.25e-155 | 444 |
| MS.gene22940.t1 | MTR_5g042650 | 51.639 | 366 | 171 | 2 | 48 | 411 | 24 | 385 | 1.90e-146 | 422 |
| MS.gene22940.t1 | MTR_1g101000 | 54.223 | 367 | 163 | 3 | 53 | 414 | 39 | 405 | 2.62e-145 | 420 |
| MS.gene22940.t1 | MTR_1g101000 | 54.223 | 367 | 163 | 3 | 53 | 414 | 39 | 405 | 3.12e-145 | 420 |
| MS.gene22940.t1 | MTR_4g124320 | 75.794 | 252 | 61 | 0 | 49 | 300 | 54 | 305 | 8.85e-145 | 415 |
| MS.gene22940.t1 | MTR_1g101020 | 54.223 | 367 | 163 | 3 | 53 | 414 | 39 | 405 | 7.85e-144 | 416 |
| MS.gene22940.t1 | MTR_7g060760 | 50.409 | 367 | 176 | 2 | 51 | 415 | 55 | 417 | 6.40e-140 | 406 |
| MS.gene22940.t1 | MTR_1g101000 | 53.153 | 333 | 151 | 3 | 53 | 380 | 39 | 371 | 2.06e-126 | 370 |
| MS.gene22940.t1 | MTR_1g036590 | 64.634 | 82 | 29 | 0 | 233 | 314 | 270 | 351 | 1.97e-29 | 119 |
| MS.gene22940.t1 | MTR_7g006750 | 52.128 | 94 | 45 | 0 | 192 | 285 | 467 | 560 | 4.32e-26 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22940.t1 | AT3G05910 | 69.139 | 418 | 124 | 4 | 1 | 416 | 1 | 415 | 0.0 | 614 |
| MS.gene22940.t1 | AT5G26670 | 69.212 | 419 | 123 | 4 | 1 | 416 | 1 | 416 | 0.0 | 605 |
| MS.gene22940.t1 | AT1G57590 | 73.442 | 369 | 98 | 0 | 48 | 416 | 75 | 443 | 0.0 | 590 |
| MS.gene22940.t1 | AT3G62060 | 65.122 | 410 | 136 | 2 | 7 | 415 | 15 | 418 | 0.0 | 579 |
| MS.gene22940.t1 | AT3G62060 | 64.964 | 411 | 137 | 2 | 7 | 416 | 15 | 419 | 0.0 | 578 |
| MS.gene22940.t1 | AT2G46930 | 62.712 | 413 | 147 | 2 | 4 | 416 | 11 | 416 | 0.0 | 566 |
| MS.gene22940.t1 | AT5G26670 | 73.826 | 298 | 78 | 0 | 119 | 416 | 1 | 298 | 2.40e-170 | 479 |
| MS.gene22940.t1 | AT5G26670 | 73.826 | 298 | 78 | 0 | 119 | 416 | 1 | 298 | 2.40e-170 | 479 |
| MS.gene22940.t1 | AT5G26670 | 73.826 | 298 | 78 | 0 | 119 | 416 | 1 | 298 | 2.40e-170 | 479 |
| MS.gene22940.t1 | AT4G19420 | 58.082 | 365 | 151 | 1 | 53 | 415 | 25 | 389 | 5.58e-163 | 464 |
| MS.gene22940.t1 | AT4G19420 | 58.082 | 365 | 151 | 1 | 53 | 415 | 25 | 389 | 5.58e-163 | 464 |
| MS.gene22940.t1 | AT1G09550 | 60.350 | 343 | 135 | 1 | 52 | 394 | 41 | 382 | 6.63e-159 | 453 |
| MS.gene22940.t1 | AT4G19420 | 53.000 | 400 | 151 | 2 | 53 | 415 | 25 | 424 | 3.61e-156 | 448 |
| MS.gene22940.t1 | AT5G23870 | 54.620 | 368 | 161 | 4 | 53 | 414 | 35 | 402 | 6.10e-151 | 434 |
| MS.gene22940.t1 | AT5G23870 | 54.620 | 368 | 161 | 4 | 53 | 414 | 35 | 402 | 6.10e-151 | 434 |
| MS.gene22940.t1 | AT5G23870 | 54.620 | 368 | 161 | 4 | 53 | 414 | 35 | 402 | 1.30e-150 | 434 |
| MS.gene22940.t1 | AT5G23870 | 54.620 | 368 | 161 | 4 | 53 | 414 | 35 | 402 | 1.77e-150 | 434 |
| MS.gene22940.t1 | AT3G05910 | 66.019 | 309 | 100 | 4 | 1 | 307 | 1 | 306 | 6.06e-148 | 422 |
| MS.gene22940.t1 | AT4G19410 | 51.359 | 368 | 176 | 2 | 46 | 410 | 17 | 384 | 1.56e-145 | 419 |
| MS.gene22940.t1 | AT3G09410 | 50.402 | 373 | 182 | 1 | 46 | 415 | 54 | 426 | 1.70e-144 | 418 |
| MS.gene22940.t1 | AT5G45280 | 49.457 | 368 | 183 | 2 | 46 | 410 | 17 | 384 | 1.13e-142 | 412 |
| MS.gene22940.t1 | AT4G19410 | 50.847 | 354 | 172 | 1 | 46 | 397 | 17 | 370 | 1.46e-137 | 404 |
| MS.gene22940.t1 | AT3G09405 | 49.864 | 367 | 179 | 2 | 47 | 410 | 45 | 409 | 3.91e-136 | 396 |
| MS.gene22940.t1 | AT3G09410 | 49.412 | 340 | 169 | 1 | 46 | 382 | 54 | 393 | 1.71e-126 | 371 |
| MS.gene22940.t1 | AT5G45280 | 52.055 | 292 | 138 | 1 | 43 | 332 | 14 | 305 | 2.57e-116 | 344 |
| MS.gene22940.t1 | AT3G09405 | 50.165 | 303 | 146 | 2 | 111 | 410 | 2 | 302 | 3.76e-112 | 331 |
| MS.gene22940.t1 | AT4G19420 | 58.403 | 238 | 94 | 2 | 53 | 288 | 25 | 259 | 2.60e-96 | 291 |
Find 96 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTTCAGGCTCTTCTTTC+TGG | -0.013953 | 1.2:+58648001 | MS.gene22940:intron |
| TCAACCCACCTTGCAGAAAT+TGG | 0.177359 | 1.2:-58648996 | None:intergenic |
| TTTGTTTCAGTGCTTCTTTC+CGG | 0.212409 | 1.2:+58648694 | MS.gene22940:intron |
| TTGCTTAATATTCCAGTAAA+AGG | 0.219538 | 1.2:-58647327 | None:intergenic |
| AGAAGCTTCATGAGCTTCTA+AGG | 0.265076 | 1.2:-58646366 | None:intergenic |
| GTGAACCAGAACATTTATTA+TGG | 0.270304 | 1.2:-58648969 | None:intergenic |
| CAGCTGGCTTGTTAATTTAG+AGG | 0.278550 | 1.2:+58646935 | MS.gene22940:CDS |
| TAGCAGCAGCAGATTGAATC+AGG | 0.324410 | 1.2:-58646433 | None:intergenic |
| CTTCTTTCTGGATGCTCAGC+TGG | 0.328684 | 1.2:+58648013 | MS.gene22940:CDS |
| CACTTCACTTTGGTAGTCCT+TGG | 0.337219 | 1.2:-58648082 | None:intergenic |
| TTAAACCATAATAAATGTTC+TGG | 0.344297 | 1.2:+58648964 | MS.gene22940:CDS |
| TTCTCAAGATCAGGTCAAAA+TGG | 0.355306 | 1.2:+58649147 | MS.gene22940:CDS |
| CGGCCGATCCCCACGGCAAT+TGG | 0.361858 | 1.2:+58648929 | MS.gene22940:CDS |
| TAAAATCTGATACAGGATTC+AGG | 0.362095 | 1.2:+58649097 | MS.gene22940:intron |
| AATTCAGAGGACAACGCATT+TGG | 0.411794 | 1.2:+58647854 | MS.gene22940:CDS |
| GTTTACCTGCCACGAGTCAT+AGG | 0.421718 | 1.2:-58648765 | None:intergenic |
| ACGTGGATCATCAAAGTTCA+TGG | 0.433128 | 1.2:+58647293 | MS.gene22940:CDS |
| TGATAGCACATGCCACCATT+TGG | 0.437780 | 1.2:+58649712 | MS.gene22940:CDS |
| GCTGACAACTCTCCTGTCAT+AGG | 0.444782 | 1.2:+58649228 | MS.gene22940:CDS |
| ATTCAATCTGCTGCTGCTAA+AGG | 0.458885 | 1.2:+58646437 | MS.gene22940:CDS |
| ACTTCACTTTGGTAGTCCTT+GGG | 0.459019 | 1.2:-58648081 | None:intergenic |
| GTGAGAGGCTTCTCAAGATC+AGG | 0.462560 | 1.2:+58649138 | MS.gene22940:CDS |
| ACGCCAATTGCCGTGGGGAT+CGG | 0.463148 | 1.2:-58648932 | None:intergenic |
| TGCGATAGACGCAAGTTCTA+CGG | 0.464930 | 1.2:-58647260 | None:intergenic |
| ATGAAGGAGCTAAGCTTGAC+TGG | 0.465960 | 1.2:-58648906 | None:intergenic |
| TTCACTATCCCCTGTAAAAG+AGG | 0.470777 | 1.2:-58647524 | None:intergenic |
| TTGCTCTGGCTGTTGGAGAC+TGG | 0.473165 | 1.2:+58649642 | MS.gene22940:CDS |
| CAACGGTGTTGTCACCCTAC+AGG | 0.473602 | 1.2:+58648283 | MS.gene22940:CDS |
| TACAGGGGATAGTGAAGATA+AGG | 0.477374 | 1.2:+58647531 | MS.gene22940:CDS |
| ACGCATTTGGTTGGCTGCAG+TGG | 0.483484 | 1.2:+58647867 | MS.gene22940:CDS |
| ATCACTAAGGCACTTCACTT+TGG | 0.485245 | 1.2:-58648092 | None:intergenic |
| GTGAAGTGCCTTAGTGATGC+TGG | 0.487536 | 1.2:+58648097 | MS.gene22940:CDS |
| TAGCTGGTGGGCATACCCTC+AGG | 0.487893 | 1.2:+58648252 | MS.gene22940:CDS |
| GTGGAGGATTTGATGTCAAA+AGG | 0.488280 | 1.2:+58647886 | MS.gene22940:CDS |
| ACGGATCCGGTGCAAACAGC+TGG | 0.489904 | 1.2:+58646919 | MS.gene22940:CDS |
| CTCACCTTGTTTCCTATGAC+AGG | 0.490925 | 1.2:-58649240 | None:intergenic |
| CCGTGGGGATCGGCCGATGA+AGG | 0.493491 | 1.2:-58648922 | None:intergenic |
| TTTGATCGCGGATACGGATC+CGG | 0.495604 | 1.2:+58646906 | MS.gene22940:CDS |
| CAGAGGACAACGCATTTGGT+TGG | 0.504022 | 1.2:+58647858 | MS.gene22940:CDS |
| TAGGCAATTGCTCTGGCTGT+TGG | 0.506232 | 1.2:+58649635 | MS.gene22940:intron |
| CAGTATTAAGAATGAATAGC+GGG | 0.512415 | 1.2:-58648742 | None:intergenic |
| ACTTGTGGCTCAGCCTCACA+TGG | 0.512424 | 1.2:+58646400 | MS.gene22940:CDS |
| ATGTGTCTTGCCTCTCAGAT+TGG | 0.519666 | 1.2:-58649200 | None:intergenic |
| ATACTAGCAATCAAGTTCTC+CGG | 0.520958 | 1.2:-58648713 | None:intergenic |
| CATTTGGTTGGCTGCAGTGG+AGG | 0.521238 | 1.2:+58647870 | MS.gene22940:CDS |
| TTACACTGCGATGAATTTCG+AGG | 0.526633 | 1.2:+58648052 | MS.gene22940:CDS |
| GAAATAACCCAGCATCACTA+AGG | 0.526893 | 1.2:-58648105 | None:intergenic |
| CCGCGATCAAAATGATAAGC+AGG | 0.530290 | 1.2:-58646894 | None:intergenic |
| TTACAATGCAAACCCAGAAA+AGG | 0.531063 | 1.2:-58646274 | None:intergenic |
| CTTTCTGGATGCTCAGCTGG+TGG | 0.531189 | 1.2:+58648016 | MS.gene22940:CDS |
| TGCAATCACGCCAATTGCCG+TGG | 0.532481 | 1.2:-58648939 | None:intergenic |
| AACAAGCCAGCTGTTTGCAC+CGG | 0.541065 | 1.2:-58646925 | None:intergenic |
| TACTGCCTATGACTCGTGGC+AGG | 0.541796 | 1.2:+58648760 | MS.gene22940:CDS |
| TGGCTCATCTGAAAACCAAA+TGG | 0.544159 | 1.2:-58649727 | None:intergenic |
| AATAATGCTCAAGAGAATCC+AGG | 0.544827 | 1.2:+58647348 | MS.gene22940:CDS |
| CTCTCCTGTCATAGGAAACA+AGG | 0.552688 | 1.2:+58649236 | MS.gene22940:CDS |
| TGCATTTGCATCAACCCAGT+TGG | 0.557817 | 1.2:-58646312 | None:intergenic |
| TCTGCTGCTGCTAAAGGAGC+TGG | 0.564131 | 1.2:+58646443 | MS.gene22940:CDS |
| GCAATCACGCCAATTGCCGT+GGG | 0.571050 | 1.2:-58648938 | None:intergenic |
| AATTTCGAGGTCATTTCCCA+AGG | 0.572709 | 1.2:+58648065 | MS.gene22940:CDS |
| GTGGCTCAGCCTCACATGGT+TGG | 0.572897 | 1.2:+58646404 | MS.gene22940:CDS |
| ATATCAATTATTACCGAAGT+GGG | 0.578018 | 1.2:-58648558 | None:intergenic |
| GAATACAGTGTTGATGTAGC+TGG | 0.581901 | 1.2:+58648236 | MS.gene22940:intron |
| CAATATGTAGGCAATTGCTC+TGG | 0.584344 | 1.2:+58649628 | MS.gene22940:intron |
| GAAATACTGTGGCAGGGAGG+TGG | 0.587258 | 1.2:+58647225 | MS.gene22940:intron |
| GATATCAATTATTACCGAAG+TGG | 0.589141 | 1.2:-58648559 | None:intergenic |
| CATGTGCTATCACAAGGGTA+AGG | 0.597112 | 1.2:-58649701 | None:intergenic |
| CCTTCATCGGCCGATCCCCA+CGG | 0.597346 | 1.2:+58648922 | MS.gene22940:CDS |
| GTGAAAATTCGTTACTGTGA+TGG | 0.602298 | 1.2:+58647499 | MS.gene22940:CDS |
| CAATGTCCTTAACAGCGGCT+CGG | 0.605068 | 1.2:-58649673 | None:intergenic |
| TACTGTGGCAGGGAGGTGGT+TGG | 0.606796 | 1.2:+58647229 | MS.gene22940:intron |
| TGGTGGCATGTGCTATCACA+AGG | 0.607600 | 1.2:-58649707 | None:intergenic |
| AATCTGAGAGGCAAGACACA+TGG | 0.627362 | 1.2:+58649202 | MS.gene22940:CDS |
| TAATCATCTTGATCCCACTT+CGG | 0.628050 | 1.2:+58648545 | MS.gene22940:CDS |
| GTCAAGCTTAGCTCCTTCAT+CGG | 0.630234 | 1.2:+58648909 | MS.gene22940:CDS |
| AGCAGCAGCAGATTGAATCA+GGG | 0.631535 | 1.2:-58646432 | None:intergenic |
| TCACAAATCCAATTTCTGCA+AGG | 0.632203 | 1.2:+58648988 | MS.gene22940:CDS |
| AGGGTGATTCCAACCATGTG+AGG | 0.639592 | 1.2:-58646413 | None:intergenic |
| TGAAGTGCCTTAGTGATGCT+GGG | 0.640149 | 1.2:+58648098 | MS.gene22940:CDS |
| ATGTATGTGTACAACCTGCT+TGG | 0.643481 | 1.2:-58647920 | None:intergenic |
| TTAATACTGCCTATGACTCG+TGG | 0.644352 | 1.2:+58648756 | MS.gene22940:CDS |
| CACATGGTGAATCTTGTGAG+AGG | 0.647932 | 1.2:+58649123 | MS.gene22940:CDS |
| GCTGCGCAGTTGCAATTCAG+AGG | 0.649968 | 1.2:+58647841 | MS.gene22940:CDS |
| TTGCTCACTGCCAATCTGAG+AGG | 0.650325 | 1.2:+58649190 | MS.gene22940:CDS |
| CTCATCTGAAAACCAAATGG+TGG | 0.655239 | 1.2:-58649724 | None:intergenic |
| AGATGATTAGTACAAACGCG+TGG | 0.666672 | 1.2:-58648531 | None:intergenic |
| TACAGGATTCAGGAATCACA+TGG | 0.672670 | 1.2:+58649107 | MS.gene22940:intron |
| GCAGTATTAAGAATGAATAG+CGG | 0.673265 | 1.2:-58648743 | None:intergenic |
| TATCGCAAGACAACACGACG+TGG | 0.673334 | 1.2:+58647276 | MS.gene22940:CDS |
| TACAGTGTTGATGTAGCTGG+TGG | 0.678330 | 1.2:+58648239 | MS.gene22940:intron |
| ACAATCAATGTCCTTAACAG+CGG | 0.695254 | 1.2:-58649678 | None:intergenic |
| AACCCAGAAAAGGTTCACCA+TGG | 0.700911 | 1.2:-58646264 | None:intergenic |
| CAATCACGCCAATTGCCGTG+GGG | 0.703508 | 1.2:-58648937 | None:intergenic |
| ACAGTGTTGATGTAGCTGGT+GGG | 0.721028 | 1.2:+58648240 | MS.gene22940:intron |
| AGTATTAAGAATGAATAGCG+GGG | 0.730636 | 1.2:-58648741 | None:intergenic |
| GGTGGCATGTGCTATCACAA+GGG | 0.739938 | 1.2:-58649706 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATAATTAATTAATATA+TGG | + | chr1.2:58646983-58647002 | MS.gene22940:intron | 0.0% |
| !! | ATCATAAAATATGATTTATT+CGG | - | chr1.2:58648820-58648839 | None:intergenic | 10.0% |
| !!! | ATACTTAATTAATTTGTTTT+TGG | + | chr1.2:58646848-58646867 | MS.gene22940:intron | 10.0% |
| !! | AGGTTTAGTTAAAATATTAT+AGG | + | chr1.2:58649281-58649300 | MS.gene22940:intron | 15.0% |
| !!! | AACAATTAGGAATTAATTTT+AGG | - | chr1.2:58648208-58648227 | None:intergenic | 15.0% |
| !!! | AACATTTTTTATAACAAAGA+AGG | - | chr1.2:58646485-58646504 | None:intergenic | 15.0% |
| !! | AAAACCTTAATGAATAAAGT+TGG | - | chr1.2:58647582-58647601 | None:intergenic | 20.0% |
| !! | AAATCATGTGATAATAATGA+TGG | - | chr1.2:58648180-58648199 | None:intergenic | 20.0% |
| !! | AGGAAAAAGATATTACTAAA+AGG | - | chr1.2:58648675-58648694 | None:intergenic | 20.0% |
| !! | ATTTAACTAAAATCTGATAC+AGG | + | chr1.2:58649090-58649109 | MS.gene22940:intron | 20.0% |
| !! | TAAAAAAATCTGCAATCATA+CGG | - | chr1.2:58647468-58647487 | None:intergenic | 20.0% |
| !! | TTAAACCATAATAAATGTTC+TGG | + | chr1.2:58648964-58648983 | MS.gene22940:CDS | 20.0% |
| !!! | AAATCATATTTTATGATCTG+TGG | + | chr1.2:58648823-58648842 | MS.gene22940:intron | 20.0% |
| !!! | TAAACATCTTATTTCTAACT+CGG | + | chr1.2:58648783-58648802 | MS.gene22940:intron | 20.0% |
| !!! | TGAGTTAAAGATTTCTTTTT+TGG | - | chr1.2:58646787-58646806 | None:intergenic | 20.0% |
| !!! | TTATTCATTAAGGTTTTCAT+AGG | + | chr1.2:58647585-58647604 | MS.gene22940:intron | 20.0% |
| ! | AATATGATTTATTCGGAGTT+TGG | - | chr1.2:58648813-58648832 | None:intergenic | 25.0% |
| ! | ACAGATAATATTCAGAAATC+AGG | - | chr1.2:58647813-58647832 | None:intergenic | 25.0% |
| ! | AGTTTATATGGCTTAAAACT+TGG | + | chr1.2:58648416-58648435 | MS.gene22940:intron | 25.0% |
| ! | ATAACAAAGAAGGTTAGAAA+TGG | - | chr1.2:58646475-58646494 | None:intergenic | 25.0% |
| ! | ATAGCCAACTTTATTCATTA+AGG | + | chr1.2:58647575-58647594 | MS.gene22940:intron | 25.0% |
| ! | ATATCAATTATTACCGAAGT+GGG | - | chr1.2:58648561-58648580 | None:intergenic | 25.0% |
| ! | CAATCATCATGCTTTATATA+AGG | - | chr1.2:58648463-58648482 | None:intergenic | 25.0% |
| ! | CACATGCTAAATAGTTTATA+TGG | + | chr1.2:58648404-58648423 | MS.gene22940:intron | 25.0% |
| ! | GAATAGTTTATAGCAAAAAC+AGG | - | chr1.2:58649391-58649410 | None:intergenic | 25.0% |
| ! | GATATTTAAGTGAAATACTG+TGG | + | chr1.2:58647214-58647233 | MS.gene22940:intron | 25.0% |
| ! | TACATATTGTCAATGCATAA+GGG | - | chr1.2:58649617-58649636 | None:intergenic | 25.0% |
| ! | TACTCAAATTATGCTGAAAA+AGG | + | chr1.2:58647413-58647432 | MS.gene22940:intron | 25.0% |
| ! | TAGAATGAAATACTGAAGTT+AGG | - | chr1.2:58648145-58648164 | None:intergenic | 25.0% |
| ! | TAGTCGATCTATTTAATGTA+GGG | + | chr1.2:58647775-58647794 | MS.gene22940:intron | 25.0% |
| ! | TCAATATGTTCATATCGTAA+AGG | + | chr1.2:58647021-58647040 | MS.gene22940:intron | 25.0% |
| ! | TGAATATTATCTGTTGACAT+AGG | + | chr1.2:58647819-58647838 | MS.gene22940:intron | 25.0% |
| ! | TGTTTGTTTGATTGAAAGTT+AGG | + | chr1.2:58647657-58647676 | MS.gene22940:intron | 25.0% |
| ! | TTAGTCGATCTATTTAATGT+AGG | + | chr1.2:58647774-58647793 | MS.gene22940:intron | 25.0% |
| ! | TTCACATGGAGAAAAATTAT+AGG | + | chr1.2:58649408-58649427 | MS.gene22940:intron | 25.0% |
| ! | TTGCTTAATATTCCAGTAAA+AGG | - | chr1.2:58647330-58647349 | None:intergenic | 25.0% |
| ! | TTTACGATATGAACATATTG+AGG | - | chr1.2:58647022-58647041 | None:intergenic | 25.0% |
| !! | TTTGCTATAAACTATTCACA+TGG | + | chr1.2:58649394-58649413 | MS.gene22940:intron | 25.0% |
| !!! | ATTTTAACTAAACCTGCATA+GGG | - | chr1.2:58649276-58649295 | None:intergenic | 25.0% |
| !!! | TAAATCTGTAGCTTTTGATT+TGG | + | chr1.2:58646813-58646832 | MS.gene22940:intron | 25.0% |
| !!! | TATTTTAACTAAACCTGCAT+AGG | - | chr1.2:58649277-58649296 | None:intergenic | 25.0% |
| !!! | TCTTAGTTTAAAGTGTTGTT+GGG | + | chr1.2:58647079-58647098 | MS.gene22940:intron | 25.0% |
| !!! | TGATTGCAGATTTTTTTAAC+TGG | + | chr1.2:58647470-58647489 | MS.gene22940:intron | 25.0% |
| !!! | TTCTTAGTTTAAAGTGTTGT+TGG | + | chr1.2:58647078-58647097 | MS.gene22940:intron | 25.0% |
| AACTGTATGAATGATGCATA+AGG | + | chr1.2:58647708-58647727 | MS.gene22940:intron | 30.0% | |
| AGCAGTGTCATGAAAAATAA+TGG | - | chr1.2:58649496-58649515 | None:intergenic | 30.0% | |
| AGTATTAAGAATGAATAGCG+GGG | - | chr1.2:58648744-58648763 | None:intergenic | 30.0% | |
| ATACATAACATGGCAAATTG+GGG | - | chr1.2:58646708-58646727 | None:intergenic | 30.0% | |
| CAGTATTAAGAATGAATAGC+GGG | - | chr1.2:58648745-58648764 | None:intergenic | 30.0% | |
| CATACATAACATGGCAAATT+GGG | - | chr1.2:58646709-58646728 | None:intergenic | 30.0% | |
| CTACATATTGTCAATGCATA+AGG | - | chr1.2:58649618-58649637 | None:intergenic | 30.0% | |
| CTCTGAACAATAATTAACGA+CGG | - | chr1.2:58648648-58648667 | None:intergenic | 30.0% | |
| GATATCAATTATTACCGAAG+TGG | - | chr1.2:58648562-58648581 | None:intergenic | 30.0% | |
| GCAGTATTAAGAATGAATAG+CGG | - | chr1.2:58648746-58648765 | None:intergenic | 30.0% | |
| GTGAACCAGAACATTTATTA+TGG | - | chr1.2:58648972-58648991 | None:intergenic | 30.0% | |
| GTTTCATTTGAGTGAATTTG+AGG | + | chr1.2:58648609-58648628 | MS.gene22940:intron | 30.0% | |
| TAAAATCTGATACAGGATTC+AGG | + | chr1.2:58649097-58649116 | MS.gene22940:intron | 30.0% | |
| TCACATTCTCATACATAACA+TGG | - | chr1.2:58646718-58646737 | None:intergenic | 30.0% | |
| TCATACATAACATGGCAAAT+TGG | - | chr1.2:58646710-58646729 | None:intergenic | 30.0% | |
| TTTCAGCAACAAAACTTCAA+AGG | - | chr1.2:58646660-58646679 | None:intergenic | 30.0% | |
| ! | AAAGGATTTGCTTAACTGTT+TGG | + | chr1.2:58647431-58647450 | MS.gene22940:intron | 30.0% |
| ! | AGCAATACATGACATGTTTT+TGG | - | chr1.2:58647133-58647152 | None:intergenic | 30.0% |
| ! | CTTATGCATTGACAATATGT+AGG | + | chr1.2:58649616-58649635 | MS.gene22940:intron | 30.0% |
| ! | TTCTTCTTTTTCTTCACTTG+TGG | + | chr1.2:58646385-58646404 | MS.gene22940:CDS | 30.0% |
| ! | TTCTTGAGATCATTCTGTTT+TGG | + | chr1.2:58648320-58648339 | MS.gene22940:intron | 30.0% |
| ! | TTTACAACTTTGTTTCCTTC+AGG | + | chr1.2:58647988-58648007 | MS.gene22940:intron | 30.0% |
| !! | ATATTTTTGCACTCATTGCA+GGG | + | chr1.2:58648492-58648511 | MS.gene22940:intron | 30.0% |
| !! | CTTAGTTTAAAGTGTTGTTG+GGG | + | chr1.2:58647080-58647099 | MS.gene22940:intron | 30.0% |
| !! | TAAAACTTGGTCATTTTGCA+TGG | + | chr1.2:58648429-58648448 | MS.gene22940:intron | 30.0% |
| !! | TATATTTTTGCACTCATTGC+AGG | + | chr1.2:58648491-58648510 | MS.gene22940:intron | 30.0% |
| !! | TGTGATAATAATGATGGACA+TGG | - | chr1.2:58648174-58648193 | None:intergenic | 30.0% |
| AAATCCAATTTCTGCAAGGT+GGG | + | chr1.2:58648992-58649011 | MS.gene22940:intron | 35.0% | |
| AATAATGCTCAAGAGAATCC+AGG | + | chr1.2:58647348-58647367 | MS.gene22940:CDS | 35.0% | |
| AATATTATAGGTTTCCGTGC+TGG | + | chr1.2:58649293-58649312 | MS.gene22940:intron | 35.0% | |
| ACAATCAATGTCCTTAACAG+CGG | - | chr1.2:58649681-58649700 | None:intergenic | 35.0% | |
| ACCGTTGAAAAAATTCCTGA+GGG | - | chr1.2:58648270-58648289 | None:intergenic | 35.0% | |
| AGGTTGACAAGTCTTTCTAT+TGG | + | chr1.2:58647041-58647060 | MS.gene22940:intron | 35.0% | |
| ATACTAGCAATCAAGTTCTC+CGG | - | chr1.2:58648716-58648735 | None:intergenic | 35.0% | |
| CTACATCAACACTGTATTCA+GGG | - | chr1.2:58648235-58648254 | None:intergenic | 35.0% | |
| GTGAAAATTCGTTACTGTGA+TGG | + | chr1.2:58647499-58647518 | MS.gene22940:CDS | 35.0% | |
| GTTTCAGTTGAATGAAAACC+TGG | - | chr1.2:58647369-58647388 | None:intergenic | 35.0% | |
| TAATCATCTTGATCCCACTT+CGG | + | chr1.2:58648545-58648564 | MS.gene22940:CDS | 35.0% | |
| TACATAACATGGCAAATTGG+GGG | - | chr1.2:58646707-58646726 | None:intergenic | 35.0% | |
| TACATCAACACTGTATTCAG+GGG | - | chr1.2:58648234-58648253 | None:intergenic | 35.0% | |
| TATTCAGGGGGAAAACAATT+AGG | - | chr1.2:58648221-58648240 | None:intergenic | 35.0% | |
| TCAAGTGAAAGAAAGATCCA+TGG | - | chr1.2:58648346-58648365 | None:intergenic | 35.0% | |
| TCACAAATCCAATTTCTGCA+AGG | + | chr1.2:58648988-58649007 | MS.gene22940:CDS | 35.0% | |
| TTAAGTGAAATACTGTGGCA+GGG | + | chr1.2:58647219-58647238 | MS.gene22940:intron | 35.0% | |
| TTACAATGCAAACCCAGAAA+AGG | - | chr1.2:58646277-58646296 | None:intergenic | 35.0% | |
| TTCTCAAGATCAGGTCAAAA+TGG | + | chr1.2:58649147-58649166 | MS.gene22940:CDS | 35.0% | |
| TTTAAGTGAAATACTGTGGC+AGG | + | chr1.2:58647218-58647237 | MS.gene22940:intron | 35.0% | |
| TTTGTTTCAGTGCTTCTTTC+CGG | + | chr1.2:58648694-58648713 | MS.gene22940:intron | 35.0% | |
| ! | AAAAAAAGTGCAGTACCTGT+AGG | - | chr1.2:58648301-58648320 | None:intergenic | 35.0% |
| ! | AAAAAAGTGCAGTACCTGTA+GGG | - | chr1.2:58648300-58648319 | None:intergenic | 35.0% |
| ! | AAATAATGGAATCGTCACTG+CGG | - | chr1.2:58649482-58649501 | None:intergenic | 35.0% |
| ! | GAAAAAGCGATACCTTTTAC+TGG | + | chr1.2:58647315-58647334 | MS.gene22940:CDS | 35.0% |
| !! | TATCATTTTGATCGCGGATA+CGG | + | chr1.2:58646900-58646919 | MS.gene22940:CDS | 35.0% |
| !!! | ACCCTCAGGAATTTTTTCAA+CGG | + | chr1.2:58648266-58648285 | MS.gene22940:CDS | 35.0% |
| !!! | TTTGTTTTTGGCAGTCTGTT+TGG | + | chr1.2:58646860-58646879 | MS.gene22940:intron | 35.0% |
| AATATAACCGCATACCAGCA+CGG | - | chr1.2:58649310-58649329 | None:intergenic | 40.0% | |
| AATTCAGAGGACAACGCATT+TGG | + | chr1.2:58647854-58647873 | MS.gene22940:CDS | 40.0% | |
| AATTTCGAGGTCATTTCCCA+AGG | + | chr1.2:58648065-58648084 | MS.gene22940:CDS | 40.0% | |
| ACATCAACACTGTATTCAGG+GGG | - | chr1.2:58648233-58648252 | None:intergenic | 40.0% | |
| ACGTGGATCATCAAAGTTCA+TGG | + | chr1.2:58647293-58647312 | MS.gene22940:CDS | 40.0% | |
| ACTACATCTAACACTAGCAG+AGG | - | chr1.2:58647616-58647635 | None:intergenic | 40.0% | |
| AGAAGCTTCATGAGCTTCTA+AGG | - | chr1.2:58646369-58646388 | None:intergenic | 40.0% | |
| AGATGATTAGTACAAACGCG+TGG | - | chr1.2:58648534-58648553 | None:intergenic | 40.0% | |
| AGTTTCACATATCCCTATGC+AGG | + | chr1.2:58649261-58649280 | MS.gene22940:intron | 40.0% | |
| ATGTATGTGTACAACCTGCT+TGG | - | chr1.2:58647923-58647942 | None:intergenic | 40.0% | |
| ATTCAATCTGCTGCTGCTAA+AGG | + | chr1.2:58646437-58646456 | MS.gene22940:CDS | 40.0% | |
| CAAATCCAATTTCTGCAAGG+TGG | + | chr1.2:58648991-58649010 | MS.gene22940:intron | 40.0% | |
| CAATATGTAGGCAATTGCTC+TGG | + | chr1.2:58649628-58649647 | MS.gene22940:intron | 40.0% | |
| CACCGTTGAAAAAATTCCTG+AGG | - | chr1.2:58648271-58648290 | None:intergenic | 40.0% | |
| GAAATAACCCAGCATCACTA+AGG | - | chr1.2:58648108-58648127 | None:intergenic | 40.0% | |
| GCTACATCAACACTGTATTC+AGG | - | chr1.2:58648236-58648255 | None:intergenic | 40.0% | |
| GTGGAGGATTTGATGTCAAA+AGG | + | chr1.2:58647886-58647905 | MS.gene22940:CDS | 40.0% | |
| TACAGGATTCAGGAATCACA+TGG | + | chr1.2:58649107-58649126 | MS.gene22940:intron | 40.0% | |
| TACAGGGGATAGTGAAGATA+AGG | + | chr1.2:58647531-58647550 | MS.gene22940:CDS | 40.0% | |
| TTAATACTGCCTATGACTCG+TGG | + | chr1.2:58648756-58648775 | MS.gene22940:CDS | 40.0% | |
| TTACACTGCGATGAATTTCG+AGG | + | chr1.2:58648052-58648071 | MS.gene22940:CDS | 40.0% | |
| TTCACTATCCCCTGTAAAAG+AGG | - | chr1.2:58647527-58647546 | None:intergenic | 40.0% | |
| ! | ACTTCACTTTGGTAGTCCTT+GGG | - | chr1.2:58648084-58648103 | None:intergenic | 40.0% |
| ! | ATAATTAACGACGGAGCACT+TGG | - | chr1.2:58648639-58648658 | None:intergenic | 40.0% |
| ! | ATCACTAAGGCACTTCACTT+TGG | - | chr1.2:58648095-58648114 | None:intergenic | 40.0% |
| !! | AGCACTTGTTTTCACCAACT+GGG | + | chr1.2:58646298-58646317 | MS.gene22940:CDS | 40.0% |
| !! | CAGCTGGCTTGTTAATTTAG+AGG | + | chr1.2:58646935-58646954 | MS.gene22940:CDS | 40.0% |
| !! | CCTGCTTATCATTTTGATCG+CGG | + | chr1.2:58646894-58646913 | MS.gene22940:CDS | 40.0% |
| !! | GAATACAGTGTTGATGTAGC+TGG | + | chr1.2:58648236-58648255 | MS.gene22940:intron | 40.0% |
| !! | GGAAAGAAGCACTGAAACAA+AGG | - | chr1.2:58648695-58648714 | None:intergenic | 40.0% |
| !! | TAGCACTTGTTTTCACCAAC+TGG | + | chr1.2:58646297-58646316 | MS.gene22940:CDS | 40.0% |
| !! | TTGACCAACTCAGCTTTGTT+TGG | + | chr1.2:58646752-58646771 | MS.gene22940:intron | 40.0% |
| !! | TTTTTGGCAGTCTGTTTGGA+TGG | + | chr1.2:58646864-58646883 | MS.gene22940:intron | 40.0% |
| !!! | AGATCATTCTGTTTTGGCCA+TGG | + | chr1.2:58648326-58648345 | MS.gene22940:intron | 40.0% |
| AATCTGAGAGGCAAGACACA+TGG | + | chr1.2:58649202-58649221 | MS.gene22940:CDS | 45.0% | |
| ACAGCCAAACAAAGCTGAGT+TGG | - | chr1.2:58646759-58646778 | None:intergenic | 45.0% | |
| AGCAGCAGCAGATTGAATCA+GGG | - | chr1.2:58646435-58646454 | None:intergenic | 45.0% | |
| ATCCAGAAAGAAGAGCCTGA+AGG | - | chr1.2:58648006-58648025 | None:intergenic | 45.0% | |
| ATGAAGGAGCTAAGCTTGAC+TGG | - | chr1.2:58648909-58648928 | None:intergenic | 45.0% | |
| ATGTGTCTTGCCTCTCAGAT+TGG | - | chr1.2:58649203-58649222 | None:intergenic | 45.0% | |
| CACATGGTGAATCTTGTGAG+AGG | + | chr1.2:58649123-58649142 | MS.gene22940:CDS | 45.0% | |
| CATGTGCTATCACAAGGGTA+AGG | - | chr1.2:58649704-58649723 | None:intergenic | 45.0% | |
| CCGCGATCAAAATGATAAGC+AGG | - | chr1.2:58646897-58646916 | None:intergenic | 45.0% | |
| CTCTCCTGTCATAGGAAACA+AGG | + | chr1.2:58649236-58649255 | MS.gene22940:CDS | 45.0% | |
| GTCAAGCTTAGCTCCTTCAT+CGG | + | chr1.2:58648909-58648928 | MS.gene22940:CDS | 45.0% | |
| TAGCAGCAGCAGATTGAATC+AGG | - | chr1.2:58646436-58646455 | None:intergenic | 45.0% | |
| TATTCCCAACGCTACTTCCT+CGG | + | chr1.2:58647169-58647188 | MS.gene22940:intron | 45.0% | |
| TCAACCCACCTTGCAGAAAT+TGG | - | chr1.2:58648999-58649018 | None:intergenic | 45.0% | |
| TGATAGCACATGCCACCATT+TGG | + | chr1.2:58649712-58649731 | MS.gene22940:CDS | 45.0% | |
| TGCATTTGCATCAACCCAGT+TGG | - | chr1.2:58646315-58646334 | None:intergenic | 45.0% | |
| TGCGATAGACGCAAGTTCTA+CGG | - | chr1.2:58647263-58647282 | None:intergenic | 45.0% | |
| TTCCTTCAGGCTCTTCTTTC+TGG | + | chr1.2:58648001-58648020 | MS.gene22940:intron | 45.0% | |
| ! | CACTTCACTTTGGTAGTCCT+TGG | - | chr1.2:58648085-58648104 | None:intergenic | 45.0% |
| ! | CTCACCTTGTTTCCTATGAC+AGG | - | chr1.2:58649243-58649262 | None:intergenic | 45.0% |
| ! | TGAAGTGCCTTAGTGATGCT+GGG | + | chr1.2:58648098-58648117 | MS.gene22940:CDS | 45.0% |
| !! | ACAGTGTTGATGTAGCTGGT+GGG | + | chr1.2:58648240-58648259 | MS.gene22940:intron | 45.0% |
| !! | GTGATGGTGCCTCTTTTACA+GGG | + | chr1.2:58647515-58647534 | MS.gene22940:CDS | 45.0% |
| !! | TACAGTGTTGATGTAGCTGG+TGG | + | chr1.2:58648239-58648258 | MS.gene22940:intron | 45.0% |
| !! | TGATGGTGCCTCTTTTACAG+GGG | + | chr1.2:58647516-58647535 | MS.gene22940:CDS | 45.0% |
| !! | TGTGATGGTGCCTCTTTTAC+AGG | + | chr1.2:58647514-58647533 | MS.gene22940:CDS | 45.0% |
| !!! | GGGGACACACTTTTTTGTGA+AGG | + | chr1.2:58647099-58647118 | MS.gene22940:intron | 45.0% |
| !! | AATTAATTATCAATTAAAAA+TGG | + | chr1.2:58646611-58646630 | MS.gene22940:intron | 5.0% |
| !! | TTATTATTATTTATTTATTC+AGG | - | chr1.2:58649342-58649361 | None:intergenic | 5.0% |
| AACAAGCCAGCTGTTTGCAC+CGG | - | chr1.2:58646928-58646947 | None:intergenic | 50.0% | |
| AGGGTGATTCCAACCATGTG+AGG | - | chr1.2:58646416-58646435 | None:intergenic | 50.0% | |
| AGTGAAATACTGTGGCAGGG+AGG | + | chr1.2:58647222-58647241 | MS.gene22940:intron | 50.0% | |
| ATGTTTGTATAGCACCGCCG+AGG | - | chr1.2:58647189-58647208 | None:intergenic | 50.0% | |
| CAATGTCCTTAACAGCGGCT+CGG | - | chr1.2:58649676-58649695 | None:intergenic | 50.0% | |
| CAGAGGACAACGCATTTGGT+TGG | + | chr1.2:58647858-58647877 | MS.gene22940:CDS | 50.0% | |
| CTTCTTTCTGGATGCTCAGC+TGG | + | chr1.2:58648013-58648032 | MS.gene22940:CDS | 50.0% | |
| GCTGACAACTCTCCTGTCAT+AGG | + | chr1.2:58649228-58649247 | MS.gene22940:CDS | 50.0% | |
| GGTGGCATGTGCTATCACAA+GGG | - | chr1.2:58649709-58649728 | None:intergenic | 50.0% | |
| GTGAGAGGCTTCTCAAGATC+AGG | + | chr1.2:58649138-58649157 | MS.gene22940:CDS | 50.0% | |
| GTTTACCTGCCACGAGTCAT+AGG | - | chr1.2:58648768-58648787 | None:intergenic | 50.0% | |
| TAGGCAATTGCTCTGGCTGT+TGG | + | chr1.2:58649635-58649654 | MS.gene22940:intron | 50.0% | |
| TATCGCAAGACAACACGACG+TGG | + | chr1.2:58647276-58647295 | MS.gene22940:CDS | 50.0% | |
| TGGTGGCATGTGCTATCACA+AGG | - | chr1.2:58649710-58649729 | None:intergenic | 50.0% | |
| TTGCTCACTGCCAATCTGAG+AGG | + | chr1.2:58649190-58649209 | MS.gene22940:CDS | 50.0% | |
| TTTGATCGCGGATACGGATC+CGG | + | chr1.2:58646906-58646925 | MS.gene22940:CDS | 50.0% | |
| ! | AGGAATGCGTTTTGCCAAGC+AGG | + | chr1.2:58647906-58647925 | MS.gene22940:CDS | 50.0% |
| ! | GTGAAGTGCCTTAGTGATGC+TGG | + | chr1.2:58648097-58648116 | MS.gene22940:CDS | 50.0% |
| ! | TAGGTTTCCGTGCTGGTATG+CGG | + | chr1.2:58649300-58649319 | MS.gene22940:intron | 50.0% |
| ! | TTTTGACCGAGCCGCTGTTA+AGG | + | chr1.2:58649667-58649686 | MS.gene22940:CDS | 50.0% |
| ACTTGTGGCTCAGCCTCACA+TGG | + | chr1.2:58646400-58646419 | MS.gene22940:CDS | 55.0% | |
| CAATCACGCCAATTGCCGTG+GGG | - | chr1.2:58648940-58648959 | None:intergenic | 55.0% | |
| CTTTCTGGATGCTCAGCTGG+TGG | + | chr1.2:58648016-58648035 | MS.gene22940:CDS | 55.0% | |
| GAAATACTGTGGCAGGGAGG+TGG | + | chr1.2:58647225-58647244 | MS.gene22940:intron | 55.0% | |
| GCAATCACGCCAATTGCCGT+GGG | - | chr1.2:58648941-58648960 | None:intergenic | 55.0% | |
| GCTGCGCAGTTGCAATTCAG+AGG | + | chr1.2:58647841-58647860 | MS.gene22940:CDS | 55.0% | |
| TACTGCCTATGACTCGTGGC+AGG | + | chr1.2:58648760-58648779 | MS.gene22940:CDS | 55.0% | |
| TCTGCTGCTGCTAAAGGAGC+TGG | + | chr1.2:58646443-58646462 | MS.gene22940:CDS | 55.0% | |
| TGCAATCACGCCAATTGCCG+TGG | - | chr1.2:58648942-58648961 | None:intergenic | 55.0% | |
| TTGCTCTGGCTGTTGGAGAC+TGG | + | chr1.2:58649642-58649661 | MS.gene22940:CDS | 55.0% | |
| ! | ACGCATTTGGTTGGCTGCAG+TGG | + | chr1.2:58647867-58647886 | MS.gene22940:CDS | 55.0% |
| ! | CATTTGGTTGGCTGCAGTGG+AGG | + | chr1.2:58647870-58647889 | MS.gene22940:CDS | 55.0% |
| !! | CAACGGTGTTGTCACCCTAC+AGG | + | chr1.2:58648283-58648302 | MS.gene22940:CDS | 55.0% |
| ACCGCCGAGGAAGTAGCGTT+GGG | - | chr1.2:58647176-58647195 | None:intergenic | 60.0% | |
| ACGCCAATTGCCGTGGGGAT+CGG | - | chr1.2:58648935-58648954 | None:intergenic | 60.0% | |
| ACGGATCCGGTGCAAACAGC+TGG | + | chr1.2:58646919-58646938 | MS.gene22940:CDS | 60.0% | |
| GTGGCTCAGCCTCACATGGT+TGG | + | chr1.2:58646404-58646423 | MS.gene22940:CDS | 60.0% | |
| TACTGTGGCAGGGAGGTGGT+TGG | + | chr1.2:58647229-58647248 | MS.gene22940:intron | 60.0% | |
| TCCCAACGCTACTTCCTCGG+CGG | + | chr1.2:58647172-58647191 | MS.gene22940:intron | 60.0% | |
| ! | TAGCTGGTGGGCATACCCTC+AGG | + | chr1.2:58648252-58648271 | MS.gene22940:CDS | 60.0% |
| CACCGCCGAGGAAGTAGCGT+TGG | - | chr1.2:58647177-58647196 | None:intergenic | 65.0% | |
| CCTTCATCGGCCGATCCCCA+CGG | + | chr1.2:58648922-58648941 | MS.gene22940:CDS | 65.0% | |
| CCGTGGGGATCGGCCGATGA+AGG | - | chr1.2:58648925-58648944 | None:intergenic | 70.0% | |
| CGGCCGATCCCCACGGCAAT+TGG | + | chr1.2:58648929-58648948 | MS.gene22940:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 58646266 | 58649745 | 58646266 | ID=MS.gene22940 |
| chr1.2 | mRNA | 58646266 | 58649745 | 58646266 | ID=MS.gene22940.t1;Parent=MS.gene22940 |
| chr1.2 | exon | 58646266 | 58646464 | 58646266 | ID=MS.gene22940.t1.exon1;Parent=MS.gene22940.t1 |
| chr1.2 | CDS | 58646266 | 58646464 | 58646266 | ID=cds.MS.gene22940.t1;Parent=MS.gene22940.t1 |
| chr1.2 | exon | 58646874 | 58646956 | 58646874 | ID=MS.gene22940.t1.exon2;Parent=MS.gene22940.t1 |
| chr1.2 | CDS | 58646874 | 58646956 | 58646874 | ID=cds.MS.gene22940.t1;Parent=MS.gene22940.t1 |
| chr1.2 | exon | 58647240 | 58647369 | 58647240 | ID=MS.gene22940.t1.exon3;Parent=MS.gene22940.t1 |
| chr1.2 | CDS | 58647240 | 58647369 | 58647240 | ID=cds.MS.gene22940.t1;Parent=MS.gene22940.t1 |
| chr1.2 | exon | 58647479 | 58647552 | 58647479 | ID=MS.gene22940.t1.exon4;Parent=MS.gene22940.t1 |
| chr1.2 | CDS | 58647479 | 58647552 | 58647479 | ID=cds.MS.gene22940.t1;Parent=MS.gene22940.t1 |
| chr1.2 | exon | 58647841 | 58647927 | 58647841 | ID=MS.gene22940.t1.exon5;Parent=MS.gene22940.t1 |
| chr1.2 | CDS | 58647841 | 58647927 | 58647841 | ID=cds.MS.gene22940.t1;Parent=MS.gene22940.t1 |
| chr1.2 | exon | 58648010 | 58648134 | 58648010 | ID=MS.gene22940.t1.exon6;Parent=MS.gene22940.t1 |
| chr1.2 | CDS | 58648010 | 58648134 | 58648010 | ID=cds.MS.gene22940.t1;Parent=MS.gene22940.t1 |
| chr1.2 | exon | 58648244 | 58648304 | 58648244 | ID=MS.gene22940.t1.exon7;Parent=MS.gene22940.t1 |
| chr1.2 | CDS | 58648244 | 58648304 | 58648244 | ID=cds.MS.gene22940.t1;Parent=MS.gene22940.t1 |
| chr1.2 | exon | 58648513 | 58648566 | 58648513 | ID=MS.gene22940.t1.exon8;Parent=MS.gene22940.t1 |
| chr1.2 | CDS | 58648513 | 58648566 | 58648513 | ID=cds.MS.gene22940.t1;Parent=MS.gene22940.t1 |
| chr1.2 | exon | 58648704 | 58648781 | 58648704 | ID=MS.gene22940.t1.exon9;Parent=MS.gene22940.t1 |
| chr1.2 | CDS | 58648704 | 58648781 | 58648704 | ID=cds.MS.gene22940.t1;Parent=MS.gene22940.t1 |
| chr1.2 | exon | 58648904 | 58649009 | 58648904 | ID=MS.gene22940.t1.exon10;Parent=MS.gene22940.t1 |
| chr1.2 | CDS | 58648904 | 58649009 | 58648904 | ID=cds.MS.gene22940.t1;Parent=MS.gene22940.t1 |
| chr1.2 | exon | 58649112 | 58649257 | 58649112 | ID=MS.gene22940.t1.exon11;Parent=MS.gene22940.t1 |
| chr1.2 | CDS | 58649112 | 58649257 | 58649112 | ID=cds.MS.gene22940.t1;Parent=MS.gene22940.t1 |
| chr1.2 | exon | 58649638 | 58649745 | 58649638 | ID=MS.gene22940.t1.exon12;Parent=MS.gene22940.t1 |
| chr1.2 | CDS | 58649638 | 58649745 | 58649638 | ID=cds.MS.gene22940.t1;Parent=MS.gene22940.t1 |
| Gene Sequence |
| Protein sequence |
