Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24166.t1 | XP_003589468.1 | 80.7 | 337 | 55 | 1 | 1 | 327 | 1 | 337 | 9.90E-94 | 354 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24166.t1 | Q8LE10 | 75.3 | 158 | 39 | 0 | 1 | 158 | 1 | 158 | 5.7e-66 | 253.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24166.t1 | G7I756 | 80.7 | 337 | 55 | 1 | 1 | 327 | 1 | 337 | 7.1e-94 | 354.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050333 | MS.gene24166 | 0.814748 | 1.32E-51 | -1.69E-46 |
MS.gene052916 | MS.gene24166 | 0.80908 | 2.26E-50 | -1.69E-46 |
MS.gene054642 | MS.gene24166 | 0.810231 | 1.28E-50 | -1.69E-46 |
MS.gene055634 | MS.gene24166 | 0.856474 | 3.14E-62 | -1.69E-46 |
MS.gene055636 | MS.gene24166 | 0.813802 | 2.13E-51 | -1.69E-46 |
MS.gene055638 | MS.gene24166 | 0.83996 | 1.16E-57 | -1.69E-46 |
MS.gene057129 | MS.gene24166 | 0.800914 | 1.15E-48 | -1.69E-46 |
MS.gene059029 | MS.gene24166 | 0.819867 | 9.27E-53 | -1.69E-46 |
MS.gene061171 | MS.gene24166 | 0.812312 | 4.52E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24166.t1 | MTR_1g024930 | 93.472 | 337 | 12 | 1 | 1 | 327 | 1 | 337 | 0.0 | 566 |
MS.gene24166.t1 | MTR_3g113790 | 59.633 | 327 | 84 | 6 | 1 | 326 | 151 | 430 | 1.46e-114 | 342 |
MS.gene24166.t1 | MTR_3g113790 | 79.221 | 154 | 32 | 0 | 1 | 154 | 151 | 304 | 6.39e-88 | 270 |
MS.gene24166.t1 | MTR_1g024840 | 99.048 | 105 | 1 | 0 | 326 | 430 | 53 | 157 | 3.90e-72 | 224 |
MS.gene24166.t1 | MTR_1g057940 | 49.660 | 147 | 74 | 0 | 1 | 147 | 1 | 147 | 2.87e-55 | 184 |
MS.gene24166.t1 | MTR_7g105810 | 50.685 | 146 | 72 | 0 | 1 | 146 | 1 | 146 | 9.46e-54 | 177 |
MS.gene24166.t1 | MTR_7g105810 | 50.345 | 145 | 72 | 0 | 1 | 145 | 1 | 145 | 1.00e-52 | 175 |
MS.gene24166.t1 | MTR_7g105810 | 50.345 | 145 | 72 | 0 | 1 | 145 | 14 | 158 | 2.53e-52 | 174 |
MS.gene24166.t1 | MTR_7g105810 | 45.545 | 101 | 55 | 0 | 45 | 145 | 12 | 112 | 2.98e-28 | 109 |
MS.gene24166.t1 | MTR_5g019720 | 32.632 | 95 | 62 | 1 | 15 | 109 | 37 | 129 | 1.98e-13 | 69.3 |
MS.gene24166.t1 | MTR_5g019720 | 27.826 | 115 | 81 | 1 | 15 | 129 | 37 | 149 | 7.27e-13 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24166.t1 | AT5G42560 | 52.134 | 328 | 119 | 6 | 1 | 326 | 1 | 292 | 1.51e-96 | 291 |
MS.gene24166.t1 | AT5G42560 | 51.266 | 316 | 116 | 6 | 13 | 326 | 2 | 281 | 3.69e-90 | 275 |
MS.gene24166.t1 | AT5G42560 | 51.266 | 316 | 116 | 6 | 13 | 326 | 2 | 281 | 3.69e-90 | 275 |
MS.gene24166.t1 | AT1G19950 | 47.024 | 336 | 148 | 6 | 1 | 329 | 1 | 313 | 2.17e-88 | 271 |
MS.gene24166.t1 | AT1G75700 | 60.843 | 166 | 65 | 0 | 1 | 166 | 1 | 166 | 2.74e-77 | 238 |
MS.gene24166.t1 | AT1G75700 | 60.843 | 166 | 65 | 0 | 1 | 166 | 1 | 166 | 2.74e-77 | 238 |
MS.gene24166.t1 | AT1G75700 | 51.795 | 195 | 65 | 1 | 1 | 166 | 1 | 195 | 1.36e-70 | 222 |
MS.gene24166.t1 | AT1G75690 | 86.667 | 105 | 14 | 0 | 326 | 430 | 50 | 154 | 4.99e-64 | 203 |
MS.gene24166.t1 | AT2G36020 | 50.955 | 157 | 77 | 0 | 1 | 157 | 1 | 157 | 1.29e-57 | 190 |
MS.gene24166.t1 | AT4G36720 | 29.032 | 93 | 64 | 2 | 15 | 107 | 45 | 135 | 8.12e-12 | 64.7 |
Find 106 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACAAGCTCCGATCAATTTC+TGG | 0.157517 | 1.2:-1000545 | None:intergenic |
GGAAGTAAAAGAGGAGTTAT+TGG | 0.203411 | 1.2:+1001567 | MS.gene24166:CDS |
TCCTCTTCAGCAACTGAAAA+TGG | 0.204563 | 1.2:+1001850 | MS.gene24166:CDS |
CAGATGAAGGATTAGACTTC+TGG | 0.208821 | 1.2:-1001759 | None:intergenic |
AATCGAAGCTGTTCAATTTC+CGG | 0.211353 | 1.2:-1000053 | None:intergenic |
CCGAATACTTTCTTCCATTC+TGG | 0.228086 | 1.2:-1001896 | None:intergenic |
ATAATTATATACCTTTGTTT+TGG | 0.244409 | 1.2:-1000392 | None:intergenic |
AAATTGAACAGCTTCGATTT+TGG | 0.251242 | 1.2:+1000057 | MS.gene24166:CDS |
GGGCTGCGTGTTATCTCTTT+TGG | 0.263030 | 1.2:-1004536 | None:intergenic |
TGCTTCCCATGCAATGGTTC+TGG | 0.280691 | 1.2:+1004559 | MS.gene24166:CDS |
AAAGTAGCCCCTCCTGTTGC+AGG | 0.293457 | 1.2:+1001607 | MS.gene24166:CDS |
GCTGTTGATTCAATATTCTT+TGG | 0.315816 | 1.2:-1001820 | None:intergenic |
GCGGCTGGTTGGCCCTTGGC+AGG | 0.329188 | 1.2:-1001475 | None:intergenic |
ACAATATTGCATACCAATAC+TGG | 0.331896 | 1.2:-1000082 | None:intergenic |
CCAGAATGGAAGAAAGTATT+CGG | 0.341573 | 1.2:+1001896 | MS.gene24166:CDS |
GGTTGGCCCTTGGCAGGTGC+AGG | 0.343393 | 1.2:-1001469 | None:intergenic |
AAGCAGCTACAGGAGGCTTC+TGG | 0.363846 | 1.2:-1001669 | None:intergenic |
ATGATAATTGTTTCAGATGA+AGG | 0.367093 | 1.2:-1001772 | None:intergenic |
TTTCAGGGATACAGAATGAT+AGG | 0.376443 | 1.2:+999743 | None:intergenic |
GCAACAGGAGGGGCTACTTT+AGG | 0.385854 | 1.2:-1001604 | None:intergenic |
AACCAGCTATAGGAGGCTTC+TGG | 0.393471 | 1.2:-1001699 | None:intergenic |
TTGAGTGTGGCTGTTGGAAT+TGG | 0.393770 | 1.2:+1004368 | MS.gene24166:CDS |
CTACTGGGTTCCTACTGATC+TGG | 0.407544 | 1.2:-1001944 | None:intergenic |
TGAGTAGTTAAACCAGCTAT+AGG | 0.410981 | 1.2:-1001709 | None:intergenic |
AGAACCATTGCATGGGAAGC+AGG | 0.424768 | 1.2:-1004557 | None:intergenic |
AAGTTCAACAGTCACATTAC+CGG | 0.426738 | 1.2:-1005520 | None:intergenic |
CAGGTAGTTGCTATAACTGT+TGG | 0.428401 | 1.2:+1004341 | MS.gene24166:intron |
ATGACAGTGTGTGAGAGATT+TGG | 0.431821 | 1.2:+1000210 | MS.gene24166:CDS |
TGCAACATATGGTTTAAAGA+AGG | 0.441591 | 1.2:-1000513 | None:intergenic |
ATTGCAGCAACGACCGGGAT+CGG | 0.443139 | 1.2:+1001429 | MS.gene24166:intron |
AATGTATTGTGAAGCTAAGT+TGG | 0.443796 | 1.2:+1000345 | MS.gene24166:CDS |
TGTTTGTTTAAACCTGCAAC+AGG | 0.458598 | 1.2:-1001619 | None:intergenic |
TGGTTATTTAAAGCAGCTAC+AGG | 0.459504 | 1.2:-1001679 | None:intergenic |
TTGCAGCAACGACCGGGATC+GGG | 0.461447 | 1.2:+1001430 | MS.gene24166:intron |
AGCAGCGGCTGGTTGGCCCT+TGG | 0.466244 | 1.2:-1001479 | None:intergenic |
AGATGAAGGATTAGACTTCT+GGG | 0.473622 | 1.2:-1001758 | None:intergenic |
TGTGGTTCTGTAGCAGCGGC+TGG | 0.474161 | 1.2:-1001490 | None:intergenic |
CTTGAAATTGCAGCAACGAC+CGG | 0.477737 | 1.2:+1001423 | MS.gene24166:intron |
TGTACAACTTGTCAAGGATC+TGG | 0.478203 | 1.2:+1005603 | MS.gene24166:CDS |
TGATAGGATCCTTTCTTACC+TGG | 0.479771 | 1.2:+999759 | MS.gene24166:CDS |
TCTCAAAGAGCTGTTAGTTA+CGG | 0.482414 | 1.2:+1000608 | MS.gene24166:CDS |
CACAAGCGCCCAGGTAAGAA+AGG | 0.483813 | 1.2:-999768 | None:intergenic |
GTTCCAAAAGGAAGTAAAAG+AGG | 0.484315 | 1.2:+1001558 | MS.gene24166:CDS |
CAGAATGGAAGAAAGTATTC+GGG | 0.484520 | 1.2:+1001897 | MS.gene24166:CDS |
AACCAGAAGCCTCCTATAGC+TGG | 0.489915 | 1.2:+1001697 | MS.gene24166:CDS |
ACTTAGCTTCACAATACATT+GGG | 0.490800 | 1.2:-1000342 | None:intergenic |
CTTGAAGTTGTGCTAGAGGC+AGG | 0.497182 | 1.2:-1001532 | None:intergenic |
GTTCTGTAGCAGCGGCTGGT+TGG | 0.499552 | 1.2:-1001486 | None:intergenic |
ATCGGAGCTTGTCGGAACTA+AGG | 0.500483 | 1.2:+1000555 | MS.gene24166:CDS |
GTTGTGCTAGAGGCAGGAGA+TGG | 0.506091 | 1.2:-1001526 | None:intergenic |
ACCTGAGCGGACTGAGGTGC+TGG | 0.512203 | 1.2:-1000680 | None:intergenic |
TCGTAAACCTGCACCTGCCA+AGG | 0.519991 | 1.2:+1001462 | MS.gene24166:CDS |
TTGAAATTGCAGCAACGACC+GGG | 0.520699 | 1.2:+1001424 | MS.gene24166:intron |
TTGTGCTAGAGGCAGGAGAT+GGG | 0.523724 | 1.2:-1001525 | None:intergenic |
AACTTAGCTTCACAATACAT+TGG | 0.528637 | 1.2:-1000343 | None:intergenic |
AACTTCAAGTCAGTTCCAAA+AGG | 0.529032 | 1.2:+1001546 | MS.gene24166:CDS |
GGGGCTACTTTAGGAGCTTG+TGG | 0.533157 | 1.2:-1001595 | None:intergenic |
ACCAGCACCTCAGTCCGCTC+AGG | 0.534486 | 1.2:+1000679 | MS.gene24166:CDS |
TGTAAAGGAGGAGACCAGAA+TGG | 0.537004 | 1.2:+1001882 | MS.gene24166:CDS |
AAGAAAGTATTCGGGTTACA+CGG | 0.537361 | 1.2:+1001905 | MS.gene24166:CDS |
ATAGCATTCATACGCTGGAT+AGG | 0.541233 | 1.2:-1000009 | None:intergenic |
CAGCCCTGCTTCCCATGCAA+TGG | 0.546625 | 1.2:+1004553 | MS.gene24166:CDS |
GAACACCGTACCTACGATCA+AGG | 0.554130 | 1.2:-1005641 | None:intergenic |
AGAAAGTATTCGGGTTACAC+GGG | 0.556108 | 1.2:+1001906 | MS.gene24166:CDS |
TGGAAAATCTCTTGTAAAGG+AGG | 0.556796 | 1.2:+1001870 | MS.gene24166:CDS |
AAATGGAAAATCTCTTGTAA+AGG | 0.557309 | 1.2:+1001867 | MS.gene24166:CDS |
ACTTTATAGCATTCATACGC+TGG | 0.570495 | 1.2:-1000014 | None:intergenic |
AGTAGTTGAAAAGAATAAGC+CGG | 0.571678 | 1.2:+1000034 | MS.gene24166:CDS |
GGTAATGTGACTGTTGAACT+TGG | 0.571939 | 1.2:+1005522 | MS.gene24166:CDS |
GAACCATTGCATGGGAAGCA+GGG | 0.571952 | 1.2:-1004556 | None:intergenic |
TGTTTAAACCTGCAACAGGA+GGG | 0.572742 | 1.2:-1001615 | None:intergenic |
GTTTAAACCTGCAACAGGAG+GGG | 0.575918 | 1.2:-1001614 | None:intergenic |
CGTAAACCTGCACCTGCCAA+GGG | 0.577276 | 1.2:+1001463 | MS.gene24166:CDS |
ATTTGTGATTCATAAAACAC+TGG | 0.577782 | 1.2:-1004395 | None:intergenic |
AACATGAGCCAGAAATTGAT+CGG | 0.579657 | 1.2:+1000537 | MS.gene24166:CDS |
TCGGAACTAAGGACAAGGGC+GGG | 0.580754 | 1.2:+1000566 | MS.gene24166:CDS |
TGAACTTGGTGGAGCTGAGA+CGG | 0.581832 | 1.2:+1005536 | MS.gene24166:CDS |
TTGTTTAAACCTGCAACAGG+AGG | 0.583194 | 1.2:-1001616 | None:intergenic |
CGAACTCTCACACCCGATCC+CGG | 0.583803 | 1.2:-1001442 | None:intergenic |
CTGCATAAATTGTGATGGTG+CGG | 0.586364 | 1.2:+1005569 | MS.gene24166:CDS |
GTTATTTAAAGCAGCTACAG+AGG | 0.587763 | 1.2:-1001647 | None:intergenic |
GATAGGATCCTTTCTTACCT+GGG | 0.588549 | 1.2:+999760 | MS.gene24166:CDS |
TGCATAAATTGTGATGGTGC+GGG | 0.591712 | 1.2:+1005570 | MS.gene24166:CDS |
CGAGCTCCAGAACCATTGCA+TGG | 0.592093 | 1.2:-1004565 | None:intergenic |
GTGCTAGAGGCAGGAGATGG+GGG | 0.593522 | 1.2:-1001523 | None:intergenic |
AACTTGTGGTTCTGTAGCAG+CGG | 0.597787 | 1.2:-1001494 | None:intergenic |
GTAGTTAAACCAGCTATAGG+AGG | 0.599048 | 1.2:-1001706 | None:intergenic |
TGTGCTAGAGGCAGGAGATG+GGG | 0.599849 | 1.2:-1001524 | None:intergenic |
TCTCGCTGCATAAATTGTGA+TGG | 0.600927 | 1.2:+1005564 | MS.gene24166:CDS |
TTATTTAAAGCAGCTACAGG+AGG | 0.610125 | 1.2:-1001676 | None:intergenic |
CTGACATGTACAACTTGTCA+AGG | 0.612986 | 1.2:+1005597 | MS.gene24166:CDS |
CTGACTTGAAGTTGTGCTAG+AGG | 0.618717 | 1.2:-1001536 | None:intergenic |
TTTGTGGTACCCCAAAACAA+AGG | 0.623782 | 1.2:+1000381 | MS.gene24166:CDS |
ACTTGGTGGAGCTGAGACGG+AGG | 0.632275 | 1.2:+1005539 | MS.gene24166:CDS |
TGAAACTTACACAAGCGCCC+AGG | 0.634837 | 1.2:-999777 | None:intergenic |
GCTTGTCGGAACTAAGGACA+AGG | 0.640010 | 1.2:+1000561 | MS.gene24166:CDS |
AACCTCGTTACCTTGATCGT+AGG | 0.640316 | 1.2:+1005631 | MS.gene24166:CDS |
AGAAATTGATCGGAGCTTGT+CGG | 0.643569 | 1.2:+1000547 | MS.gene24166:CDS |
GAGCTCCAGAACCATTGCAT+GGG | 0.645320 | 1.2:-1004564 | None:intergenic |
TGAACTACCTGAGCGGACTG+AGG | 0.646512 | 1.2:-1000686 | None:intergenic |
AATGTGACTGTTGAACTTGG+TGG | 0.646977 | 1.2:+1005525 | MS.gene24166:CDS |
GTCGGAACTAAGGACAAGGG+CGG | 0.652471 | 1.2:+1000565 | MS.gene24166:CDS |
GAAAGTATTCGGGTTACACG+GGG | 0.677731 | 1.2:+1001907 | MS.gene24166:CDS |
ATCATAATGAACTACCTGAG+CGG | 0.709859 | 1.2:-1000693 | None:intergenic |
CTTGTCGGAACTAAGGACAA+GGG | 0.728246 | 1.2:+1000562 | MS.gene24166:CDS |
TACCTACGATCAAGGTAACG+AGG | 0.728545 | 1.2:-1005633 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGATATAGTAATAAATAAA+TGG | - | chr1.2:1004445-1004464 | None:intergenic | 10.0% |
!! | ATTATTAAATTATTACAAAG+GGG | - | chr1.2:1005678-1005697 | None:intergenic | 10.0% |
!! | CATTATTAAATTATTACAAA+GGG | - | chr1.2:1005679-1005698 | None:intergenic | 10.0% |
!! | TATTTAGAAAAAAAAATGTT+TGG | - | chr1.2:1003026-1003045 | None:intergenic | 10.0% |
!! | TCATTATTAAATTATTACAA+AGG | - | chr1.2:1005680-1005699 | None:intergenic | 10.0% |
!! | TTAAAAATAGGAAATATAAT+AGG | - | chr1.2:1002977-1002996 | None:intergenic | 10.0% |
!!! | TAAAATACTGATTAATAATA+TGG | - | chr1.2:1005271-1005290 | None:intergenic | 10.0% |
!!! | TATTATATTTCCTATTTTTA+AGG | + | chr1.2:1002976-1002995 | MS.gene24166:intron | 10.0% |
!! | AAGTTAAATTATATAACTTC+TGG | + | chr1.2:1005040-1005059 | MS.gene24166:intron | 15.0% |
!! | ACAAATATATGTTGTTATAA+CGG | - | chr1.2:1003197-1003216 | None:intergenic | 15.0% |
!! | TAGGTTTATTTATGAAAAAT+CGG | + | chr1.2:1003785-1003804 | MS.gene24166:intron | 15.0% |
!! | TATACCAAGAATAATAAAAT+AGG | + | chr1.2:1005305-1005324 | MS.gene24166:intron | 15.0% |
!! | TATATCATATAATAATGTGT+TGG | + | chr1.2:1004457-1004476 | MS.gene24166:intron | 15.0% |
!!! | AAAAATTTTTCCAAAGAAAA+TGG | + | chr1.2:1002904-1002923 | MS.gene24166:intron | 15.0% |
!!! | ATAACCTATTTTATTATTCT+TGG | - | chr1.2:1005312-1005331 | None:intergenic | 15.0% |
!!! | ATAATTATATACCTTTGTTT+TGG | - | chr1.2:1000395-1000414 | None:intergenic | 15.0% |
!!! | ATTTTTTTTTCTAAATACCT+TGG | + | chr1.2:1003029-1003048 | MS.gene24166:intron | 15.0% |
!!! | GTTTATTAAATTTTATTTCC+AGG | + | chr1.2:1002859-1002878 | MS.gene24166:intron | 15.0% |
!!! | TAATTATATACCTTTGTTTT+GGG | - | chr1.2:1000394-1000413 | None:intergenic | 15.0% |
!! | AAGAATATATTAAGCACAAT+TGG | - | chr1.2:1002344-1002363 | None:intergenic | 20.0% |
!! | AATATGATTCCATAAAAAAG+TGG | - | chr1.2:1002114-1002133 | None:intergenic | 20.0% |
!! | AGGTTTATTTATGAAAAATC+GGG | + | chr1.2:1003786-1003805 | MS.gene24166:intron | 20.0% |
!! | ATTTGTAAAAGATTGCTTAT+AGG | + | chr1.2:1005003-1005022 | MS.gene24166:intron | 20.0% |
!! | CAAAAAGTTTATATGCTTAT+AGG | + | chr1.2:1004825-1004844 | MS.gene24166:intron | 20.0% |
!! | CTGCAACAAATTAAAAAAAA+AGG | - | chr1.2:1004515-1004534 | None:intergenic | 20.0% |
!! | GATATGTTAAGAGAATAAAA+TGG | - | chr1.2:1001361-1001380 | None:intergenic | 20.0% |
!! | GCAATAATGAAATTGAAATT+TGG | + | chr1.2:1003281-1003300 | MS.gene24166:intron | 20.0% |
!! | GTTAACATTATAATATTCCA+AGG | - | chr1.2:1003004-1003023 | None:intergenic | 20.0% |
!! | GTTATACATAAATGTTTATC+AGG | + | chr1.2:1002674-1002693 | MS.gene24166:intron | 20.0% |
!! | GTTATTCCTAAGAATAAATT+TGG | + | chr1.2:1003084-1003103 | MS.gene24166:intron | 20.0% |
!! | TAAAACATTCATTTGCTTAA+TGG | - | chr1.2:1003568-1003587 | None:intergenic | 20.0% |
!! | TGAATGAATGAATAAGAAAT+AGG | - | chr1.2:1004272-1004291 | None:intergenic | 20.0% |
!!! | AAACAATTTTCTCAAAGAAA+TGG | + | chr1.2:1003837-1003856 | MS.gene24166:intron | 20.0% |
!!! | AACAATTTTCTCAAAGAAAT+GGG | + | chr1.2:1003838-1003857 | MS.gene24166:intron | 20.0% |
!!! | AACATTTTCAAAGATAAGAT+TGG | - | chr1.2:1005463-1005482 | None:intergenic | 20.0% |
!!! | AAGTTTTTTTTTATAGGTAG+TGG | + | chr1.2:1004862-1004881 | MS.gene24166:intron | 20.0% |
!!! | AATTATATACCTTTGTTTTG+GGG | - | chr1.2:1000393-1000412 | None:intergenic | 20.0% |
!!! | ACACTTTATACTTTTATGAA+TGG | + | chr1.2:1004622-1004641 | MS.gene24166:intron | 20.0% |
!!! | AGGTATATAATTATTTTCTG+TGG | + | chr1.2:1000401-1000420 | MS.gene24166:intron | 20.0% |
!!! | ATTTAATTTCATCTGAAACA+CGG | - | chr1.2:1003431-1003450 | None:intergenic | 20.0% |
!!! | ATTTTTATGATTTTATTCCC+AGG | - | chr1.2:1002816-1002835 | None:intergenic | 20.0% |
!!! | ATTTTTTGGGATATAAAGAT+AGG | - | chr1.2:1003064-1003083 | None:intergenic | 20.0% |
!!! | CTATAAGCATATAAACTTTT+TGG | - | chr1.2:1004827-1004846 | None:intergenic | 20.0% |
!!! | CTTCAATTTTATGTTGTTTA+GGG | - | chr1.2:1003129-1003148 | None:intergenic | 20.0% |
!!! | CTTTTAATATGAATTTGTCT+AGG | + | chr1.2:1002065-1002084 | MS.gene24166:intron | 20.0% |
!!! | CTTTTTTTTTAATTTGTTGC+AGG | + | chr1.2:1004513-1004532 | MS.gene24166:intron | 20.0% |
!!! | GTGGATAAGTTTTTTTTTAT+AGG | + | chr1.2:1004856-1004875 | MS.gene24166:intron | 20.0% |
!!! | TAAATTTTGTGACTTTGTTT+GGG | + | chr1.2:1002466-1002485 | MS.gene24166:intron | 20.0% |
!!! | TAATGATTTTATTTGTCCTT+TGG | + | chr1.2:999958-999977 | MS.gene24166:intron | 20.0% |
!!! | TCTTAGGAATAACATTTTTT+GGG | - | chr1.2:1003077-1003096 | None:intergenic | 20.0% |
!!! | TCTTCAATTTTATGTTGTTT+AGG | - | chr1.2:1003130-1003149 | None:intergenic | 20.0% |
!!! | TTATGGAATCATATTTTGAT+GGG | + | chr1.2:1002119-1002138 | MS.gene24166:intron | 20.0% |
!!! | TTCTTAGGAATAACATTTTT+TGG | - | chr1.2:1003078-1003097 | None:intergenic | 20.0% |
!!! | TTGAGAAATAGTTTTGTTTA+TGG | + | chr1.2:1003343-1003362 | MS.gene24166:intron | 20.0% |
!!! | TTTATGGAATCATATTTTGA+TGG | + | chr1.2:1002118-1002137 | MS.gene24166:intron | 20.0% |
! | AAATGGAAAATCTCTTGTAA+AGG | + | chr1.2:1001867-1001886 | MS.gene24166:CDS | 25.0% |
! | AACAATGAATACTTTCAAGA+TGG | - | chr1.2:1001174-1001193 | None:intergenic | 25.0% |
! | AAGTTATATTTGTAGATTCC+TGG | + | chr1.2:1002795-1002814 | MS.gene24166:intron | 25.0% |
! | ACAACATTTCTTGATAAAGA+TGG | - | chr1.2:1003726-1003745 | None:intergenic | 25.0% |
! | ACCTGTTAAATCATTAATCT+AGG | + | chr1.2:1000827-1000846 | MS.gene24166:intron | 25.0% |
! | ACTTTGGATATAAGTACTTA+TGG | + | chr1.2:1000758-1000777 | MS.gene24166:intron | 25.0% |
! | AGTGTACCAAATTTATTCTT+AGG | - | chr1.2:1003093-1003112 | None:intergenic | 25.0% |
! | AGTTATATTTGTAGATTCCT+GGG | + | chr1.2:1002796-1002815 | MS.gene24166:intron | 25.0% |
! | AGTTCATTATGATTATGCAT+TGG | + | chr1.2:1000703-1000722 | MS.gene24166:intron | 25.0% |
! | ATGAATGAATAAGAAATAGG+AGG | - | chr1.2:1004269-1004288 | None:intergenic | 25.0% |
! | ATGATAATTGTTTCAGATGA+AGG | - | chr1.2:1001775-1001794 | None:intergenic | 25.0% |
! | ATTACATAGCACTGTAATTA+TGG | + | chr1.2:1001281-1001300 | MS.gene24166:intron | 25.0% |
! | ATTTGTGATTCATAAAACAC+TGG | - | chr1.2:1004398-1004417 | None:intergenic | 25.0% |
! | CAACATGGAAAAATAAAAAC+AGG | - | chr1.2:1000171-1000190 | None:intergenic | 25.0% |
! | CCTGTTAAATCATTAATCTA+GGG | + | chr1.2:1000828-1000847 | MS.gene24166:intron | 25.0% |
! | CTCACAAGTTATTGTTAATT+TGG | + | chr1.2:1004664-1004683 | MS.gene24166:intron | 25.0% |
! | GGTTTATTTATGAAAAATCG+GGG | + | chr1.2:1003787-1003806 | MS.gene24166:intron | 25.0% |
! | GTTGTTTATATAAGCTATAC+TGG | - | chr1.2:1002557-1002576 | None:intergenic | 25.0% |
! | TAAAGTTTACCTTTGTGTTA+GGG | + | chr1.2:1000470-1000489 | MS.gene24166:intron | 25.0% |
! | TAATTGTGTAGTAGTAGATA+AGG | - | chr1.2:1004160-1004179 | None:intergenic | 25.0% |
! | TATGTTTGGATGGTTTATTT+CGG | + | chr1.2:1002429-1002448 | MS.gene24166:intron | 25.0% |
! | TGAATTGAATTCTTCTTGAA+GGG | + | chr1.2:1000318-1000337 | MS.gene24166:intron | 25.0% |
! | TGATTAACGATACAAAAACA+TGG | - | chr1.2:1001043-1001062 | None:intergenic | 25.0% |
! | TTAATACGTGGATAAAATGT+GGG | - | chr1.2:1004207-1004226 | None:intergenic | 25.0% |
! | TTAGAAATTCCAAAGTCAAA+TGG | - | chr1.2:1003165-1003184 | None:intergenic | 25.0% |
! | TTGAAAAAAAATGCACACAA+TGG | + | chr1.2:1003911-1003930 | MS.gene24166:intron | 25.0% |
! | TTGAATTGAATTCTTCTTGA+AGG | + | chr1.2:1000317-1000336 | MS.gene24166:intron | 25.0% |
! | TTGTTAGTTACAAGTTAAGT+AGG | - | chr1.2:1001327-1001346 | None:intergenic | 25.0% |
! | TTTAATACGTGGATAAAATG+TGG | - | chr1.2:1004208-1004227 | None:intergenic | 25.0% |
! | TTTCAATTTCATTATTGCCA+TGG | - | chr1.2:1003279-1003298 | None:intergenic | 25.0% |
! | TTTGCATTTCTTCAATATGA+TGG | + | chr1.2:1000447-1000466 | MS.gene24166:intron | 25.0% |
!! | AAGATAGGAATTTTATTCCA+AGG | - | chr1.2:1003049-1003068 | None:intergenic | 25.0% |
!! | AATAGTGTTAGCAATTTTCA+TGG | - | chr1.2:1005763-1005782 | None:intergenic | 25.0% |
!! | AATTTTTCCAAAGAAAATGG+TGG | + | chr1.2:1002907-1002926 | MS.gene24166:intron | 25.0% |
!! | ATTTGAGTTTGACTTAACTT+TGG | + | chr1.2:1000742-1000761 | MS.gene24166:intron | 25.0% |
!! | ATTTTTCCAAAGAAAATGGT+GGG | + | chr1.2:1002908-1002927 | MS.gene24166:intron | 25.0% |
!! | CTTTATACTTTTATGAATGG+AGG | + | chr1.2:1004625-1004644 | MS.gene24166:intron | 25.0% |
!! | GTAAATTTTGTGACTTTGTT+TGG | + | chr1.2:1002465-1002484 | MS.gene24166:intron | 25.0% |
!! | GTTATAAAATAGCTTTTGCA+AGG | + | chr1.2:1002652-1002671 | MS.gene24166:intron | 25.0% |
!! | TACCATGATAATTTGTCATT+TGG | + | chr1.2:1005720-1005739 | MS.gene24166:intron | 25.0% |
!! | TTGTTTTCAGAAACTTTAGT+TGG | + | chr1.2:1002209-1002228 | MS.gene24166:intron | 25.0% |
!!! | ATCTTGAAAGTATTCATTGT+TGG | + | chr1.2:1001173-1001192 | MS.gene24166:intron | 25.0% |
!!! | ATTTGACTTTGGAATTTCTA+AGG | + | chr1.2:1003164-1003183 | MS.gene24166:intron | 25.0% |
!!! | CATTTTAAAGCGTTATGTAA+CGG | + | chr1.2:1002009-1002028 | MS.gene24166:intron | 25.0% |
!!! | CCAATTTTTTTGAATCGATA+TGG | + | chr1.2:999806-999825 | MS.gene24166:intron | 25.0% |
!!! | CCATATCGATTCAAAAAAAT+TGG | - | chr1.2:999809-999828 | None:intergenic | 25.0% |
!!! | GTACTTGTGTATTTTTAGTT+AGG | + | chr1.2:1003497-1003516 | MS.gene24166:intron | 25.0% |
!!! | TGAATTAGCTTTTAGTTCAT+TGG | + | chr1.2:1004761-1004780 | MS.gene24166:intron | 25.0% |
!!! | TGGCATTTTTCATATTTTTG+TGG | + | chr1.2:1000365-1000384 | MS.gene24166:CDS | 25.0% |
!!! | TTGTCATAAGTTGTTTTCAT+TGG | - | chr1.2:1002496-1002515 | None:intergenic | 25.0% |
!!! | TTTTTATTTTTCCATGTTGC+AGG | + | chr1.2:1000172-1000191 | MS.gene24166:intron | 25.0% |
AAAAACATAACCATGTCATG+TGG | + | chr1.2:1003950-1003969 | MS.gene24166:intron | 30.0% | |
AAACAAAATCTGCATTTCTC+TGG | - | chr1.2:1005495-1005514 | None:intergenic | 30.0% | |
AACTTAGCTTCACAATACAT+TGG | - | chr1.2:1000346-1000365 | None:intergenic | 30.0% | |
AAGAAATTAGCAACCTGATA+TGG | - | chr1.2:1005438-1005457 | None:intergenic | 30.0% | |
AATATGAATTTGTCTAGGCA+CGG | + | chr1.2:1002070-1002089 | MS.gene24166:intron | 30.0% | |
AATGTATTGTGAAGCTAAGT+TGG | + | chr1.2:1000345-1000364 | MS.gene24166:CDS | 30.0% | |
ACAATATTGCATACCAATAC+TGG | - | chr1.2:1000085-1000104 | None:intergenic | 30.0% | |
ACTTAGCTTCACAATACATT+GGG | - | chr1.2:1000345-1000364 | None:intergenic | 30.0% | |
ACTTTCAAGATGGAAAAGAA+AGG | - | chr1.2:1001164-1001183 | None:intergenic | 30.0% | |
AGTAGTTGAAAAGAATAAGC+CGG | + | chr1.2:1000034-1000053 | MS.gene24166:CDS | 30.0% | |
ATTCATTGTTGGAGGAAAAT+GGG | + | chr1.2:1001184-1001203 | MS.gene24166:intron | 30.0% | |
CAATGTACATAGGTTATGTT+TGG | + | chr1.2:1002415-1002434 | MS.gene24166:intron | 30.0% | |
CCCTAGATTAATGATTTAAC+AGG | - | chr1.2:1000831-1000850 | None:intergenic | 30.0% | |
CTAGGAAACTAACTAATAAC+TGG | + | chr1.2:1000860-1000879 | MS.gene24166:intron | 30.0% | |
GTAAAGTTTACCTTTGTGTT+AGG | + | chr1.2:1000469-1000488 | MS.gene24166:intron | 30.0% | |
GTAGTAGATAAGGATTTAAG+AGG | - | chr1.2:1004150-1004169 | None:intergenic | 30.0% | |
TATTCATTGTTGGAGGAAAA+TGG | + | chr1.2:1001183-1001202 | MS.gene24166:intron | 30.0% | |
TCCAAACATATCCATAGTTT+CGG | + | chr1.2:1002736-1002755 | MS.gene24166:intron | 30.0% | |
TCTTGAACTTGATCAAAACA+CGG | + | chr1.2:1004230-1004249 | MS.gene24166:intron | 30.0% | |
TGCAACATATGGTTTAAAGA+AGG | - | chr1.2:1000516-1000535 | None:intergenic | 30.0% | |
TGGAAATGAGAAAAACCAAA+GGG | + | chr1.2:1003810-1003829 | MS.gene24166:intron | 30.0% | |
TGGTTTAATGATTAGCATTG+TGG | + | chr1.2:999924-999943 | MS.gene24166:intron | 30.0% | |
TGTCTAACAATACAAACACA+TGG | - | chr1.2:1000975-1000994 | None:intergenic | 30.0% | |
TTATTTATGAAAAATCGGGG+TGG | + | chr1.2:1003790-1003809 | MS.gene24166:intron | 30.0% | |
TTCCAAGGAACCTTAAAAAT+AGG | - | chr1.2:1002989-1003008 | None:intergenic | 30.0% | |
TTCCAATAAGCTGACATTTA+GGG | + | chr1.2:1002760-1002779 | MS.gene24166:intron | 30.0% | |
TTGCTTATAGGTAGTGTTTA+TGG | + | chr1.2:1005015-1005034 | MS.gene24166:intron | 30.0% | |
TTTAAGAGGAGAAGAAAGAA+AGG | - | chr1.2:1004136-1004155 | None:intergenic | 30.0% | |
TTTCCAATAAGCTGACATTT+AGG | + | chr1.2:1002759-1002778 | MS.gene24166:intron | 30.0% | |
! | AAATTGAACAGCTTCGATTT+TGG | + | chr1.2:1000057-1000076 | MS.gene24166:CDS | 30.0% |
! | AGAGAAATGCAGATTTTGTT+TGG | + | chr1.2:1005494-1005513 | MS.gene24166:intron | 30.0% |
! | ATGGTGATAATGATTAGCAT+TGG | + | chr1.2:999825-999844 | MS.gene24166:intron | 30.0% |
! | GGAAAAATTTTTCTATTCCC+AGG | - | chr1.2:1002896-1002915 | None:intergenic | 30.0% |
! | GGTATGTATTAAGTTGTATG+TGG | - | chr1.2:1000810-1000829 | None:intergenic | 30.0% |
! | TGGTGATAATGATTAGCATT+GGG | + | chr1.2:999826-999845 | MS.gene24166:intron | 30.0% |
! | TTATTTGTCCTTTGGTGTAA+TGG | + | chr1.2:999966-999985 | MS.gene24166:intron | 30.0% |
! | TTGGAGATACTTTTGTATCA+TGG | + | chr1.2:1000229-1000248 | MS.gene24166:CDS | 30.0% |
! | TTTATTCCCACCATTTTCTT+TGG | - | chr1.2:1002917-1002936 | None:intergenic | 30.0% |
!! | AGTTAATATGCGCTTGTTTT+AGG | - | chr1.2:1003760-1003779 | None:intergenic | 30.0% |
!! | ATTTTACTGCCATTTGACTT+TGG | + | chr1.2:1003153-1003172 | MS.gene24166:intron | 30.0% |
!! | CGTTACATAACGCTTTAAAA+TGG | - | chr1.2:1002011-1002030 | None:intergenic | 30.0% |
!! | GAGAAATGCAGATTTTGTTT+GGG | + | chr1.2:1005495-1005514 | MS.gene24166:intron | 30.0% |
!! | GCTGTTGATTCAATATTCTT+TGG | - | chr1.2:1001823-1001842 | None:intergenic | 30.0% |
!! | GTCATTTTGCTTATCAGAAA+AGG | - | chr1.2:1000906-1000925 | None:intergenic | 30.0% |
!! | TTGAAAGTATTCATTGTTGG+AGG | + | chr1.2:1001176-1001195 | MS.gene24166:intron | 30.0% |
!!! | GAAAATTGTTTTTTGCCCTT+TGG | - | chr1.2:1003828-1003847 | None:intergenic | 30.0% |
!!! | TTCCTATTTTTAAGGTTCCT+TGG | + | chr1.2:1002984-1003003 | MS.gene24166:intron | 30.0% |
AACATGAGCCAGAAATTGAT+CGG | + | chr1.2:1000537-1000556 | MS.gene24166:CDS | 35.0% | |
AACTTCAAGTCAGTTCCAAA+AGG | + | chr1.2:1001546-1001565 | MS.gene24166:CDS | 35.0% | |
AAGTTCAACAGTCACATTAC+CGG | - | chr1.2:1005523-1005542 | None:intergenic | 35.0% | |
AATAAAGTTCCCATGGAGAT+GGG | + | chr1.2:1002931-1002950 | MS.gene24166:intron | 35.0% | |
AATCAGTTCAAGTCCATATC+AGG | + | chr1.2:1005422-1005441 | MS.gene24166:intron | 35.0% | |
AATCGAAGCTGTTCAATTTC+CGG | - | chr1.2:1000056-1000075 | None:intergenic | 35.0% | |
ACAACCTAATGTCTAGTAAC+CGG | - | chr1.2:1005396-1005415 | None:intergenic | 35.0% | |
ACCGAAACTATGGATATGTT+TGG | - | chr1.2:1002740-1002759 | None:intergenic | 35.0% | |
ACTTTATAGCATTCATACGC+TGG | - | chr1.2:1000017-1000036 | None:intergenic | 35.0% | |
AGAAAGGTGGAATGTAATTG+AGG | - | chr1.2:1004120-1004139 | None:intergenic | 35.0% | |
AGATGAAGGATTAGACTTCT+GGG | - | chr1.2:1001761-1001780 | None:intergenic | 35.0% | |
AGTGAACATCATCCATTTAG+TGG | - | chr1.2:1003990-1004009 | None:intergenic | 35.0% | |
ATACTTCACGTTTAGCATCA+AGG | - | chr1.2:1000113-1000132 | None:intergenic | 35.0% | |
ATCATAATGAACTACCTGAG+CGG | - | chr1.2:1000696-1000715 | None:intergenic | 35.0% | |
CAAAATTGTCGATGTTTAGC+CGG | + | chr1.2:1001969-1001988 | MS.gene24166:intron | 35.0% | |
CAAGATGGAAAAGAAAGGAA+AGG | - | chr1.2:1001159-1001178 | None:intergenic | 35.0% | |
CATATTGTAGTGTTCTTTGC+TGG | + | chr1.2:1001123-1001142 | MS.gene24166:intron | 35.0% | |
CATTTGCTTAATGGTAAGCA+TGG | - | chr1.2:1003559-1003578 | None:intergenic | 35.0% | |
CGCCAAATGACAAATTATCA+TGG | - | chr1.2:1005725-1005744 | None:intergenic | 35.0% | |
CTAAAAGCTAATTCAAACGC+TGG | - | chr1.2:1004756-1004775 | None:intergenic | 35.0% | |
CTAAGAAAAACCAGATCAGT+AGG | + | chr1.2:1001934-1001953 | MS.gene24166:intron | 35.0% | |
CTTATTGGAAACCGAAACTA+TGG | - | chr1.2:1002750-1002769 | None:intergenic | 35.0% | |
GCATTGTGAATGAATGAACT+TGG | + | chr1.2:1003632-1003651 | MS.gene24166:intron | 35.0% | |
GGAAGTAAAAGAGGAGTTAT+TGG | + | chr1.2:1001567-1001586 | MS.gene24166:CDS | 35.0% | |
GTACATAGGTTATGTTTGGA+TGG | + | chr1.2:1002419-1002438 | MS.gene24166:intron | 35.0% | |
GTGGAAATGAGAAAAACCAA+AGG | + | chr1.2:1003809-1003828 | MS.gene24166:intron | 35.0% | |
GTTCCAAAAGGAAGTAAAAG+AGG | + | chr1.2:1001558-1001577 | MS.gene24166:CDS | 35.0% | |
TATGTTGTTCCCTAACACAA+AGG | - | chr1.2:1000482-1000501 | None:intergenic | 35.0% | |
TCCAGGTATAAAATGTTCCT+GGG | + | chr1.2:1002876-1002895 | MS.gene24166:intron | 35.0% | |
TCTCAAAGAGCTGTTAGTTA+CGG | + | chr1.2:1000608-1000627 | MS.gene24166:CDS | 35.0% | |
TGAGTAGTTAAACCAGCTAT+AGG | - | chr1.2:1001712-1001731 | None:intergenic | 35.0% | |
TGGAAAATCTCTTGTAAAGG+AGG | + | chr1.2:1001870-1001889 | MS.gene24166:CDS | 35.0% | |
TGGCAATGTACAATGTACAT+AGG | + | chr1.2:1002405-1002424 | MS.gene24166:intron | 35.0% | |
TGTTTGTTTAAACCTGCAAC+AGG | - | chr1.2:1001622-1001641 | None:intergenic | 35.0% | |
TTCCAGGTATAAAATGTTCC+TGG | + | chr1.2:1002875-1002894 | MS.gene24166:intron | 35.0% | |
! | AAAGCGTTATGTAACGGTTT+CGG | + | chr1.2:1002015-1002034 | MS.gene24166:intron | 35.0% |
! | AAGTCTTATCCCACTAAGTA+GGG | - | chr1.2:999889-999908 | None:intergenic | 35.0% |
! | AATTTTATCCCCATCTCCAT+GGG | - | chr1.2:1002943-1002962 | None:intergenic | 35.0% |
! | ACTCCTCTTTTACTTCCTTT+TGG | - | chr1.2:1001564-1001583 | None:intergenic | 35.0% |
! | AGTTCAAGAGCTTTAATACG+TGG | - | chr1.2:1004219-1004238 | None:intergenic | 35.0% |
! | ATGCTAGCTTGAACAATCAT+TGG | - | chr1.2:1004985-1005004 | None:intergenic | 35.0% |
! | ATTTCATCTGAAACACGGAA+TGG | - | chr1.2:1003426-1003445 | None:intergenic | 35.0% |
! | GATAATGATTAGCATTGGGA+TGG | + | chr1.2:999830-999849 | MS.gene24166:intron | 35.0% |
! | GTTATTTAAAGCAGCTACAG+AGG | - | chr1.2:1001650-1001669 | None:intergenic | 35.0% |
! | TAATTTTATCCCCATCTCCA+TGG | - | chr1.2:1002944-1002963 | None:intergenic | 35.0% |
! | TATGTTTTTCATCTTCCACG+TGG | - | chr1.2:1003939-1003958 | None:intergenic | 35.0% |
! | TGGTTATTTAAAGCAGCTAC+AGG | - | chr1.2:1001652-1001671 | None:intergenic | 35.0% |
! | TTATTTAAAGCAGCTACAGG+AGG | - | chr1.2:1001679-1001698 | None:intergenic | 35.0% |
! | TTTTCCATGTTGCAGGATTT+TGG | + | chr1.2:1000179-1000198 | MS.gene24166:intron | 35.0% |
!! | AAGAAAGTATTCGGGTTACA+CGG | + | chr1.2:1001905-1001924 | MS.gene24166:CDS | 35.0% |
!! | ATCGACAATTTTGTGCTACT+GGG | - | chr1.2:1001962-1001981 | None:intergenic | 35.0% |
!! | CAGAATGGAAGAAAGTATTC+GGG | + | chr1.2:1001897-1001916 | MS.gene24166:CDS | 35.0% |
!! | CCAGAATGGAAGAAAGTATT+CGG | + | chr1.2:1001896-1001915 | MS.gene24166:CDS | 35.0% |
!! | TTATGAATGGAGGAGCATTA+TGG | + | chr1.2:1004635-1004654 | MS.gene24166:intron | 35.0% |
!! | TTGTTGAGCTCTAAGTCAAA+GGG | + | chr1.2:1005177-1005196 | MS.gene24166:intron | 35.0% |
!! | TTTGTTGAGCTCTAAGTCAA+AGG | + | chr1.2:1005176-1005195 | MS.gene24166:intron | 35.0% |
!!! | AGCTTGATGCCACTTTTTTA+TGG | + | chr1.2:1002102-1002121 | MS.gene24166:intron | 35.0% |
!!! | ATGCGAGTGTTTGTTTTTTC+AGG | + | chr1.2:1004322-1004341 | MS.gene24166:intron | 35.0% |
!!! | GGAATCATATTTTGATGGGA+TGG | + | chr1.2:1002123-1002142 | MS.gene24166:intron | 35.0% |
AAGAGGAGAAGAAAGAAAGG+TGG | - | chr1.2:1004133-1004152 | None:intergenic | 40.0% | |
AATGTGACTGTTGAACTTGG+TGG | + | chr1.2:1005525-1005544 | MS.gene24166:CDS | 40.0% | |
ACTAAGTAGGGTCAGCTAAA+TGG | - | chr1.2:999877-999896 | None:intergenic | 40.0% | |
AGAAATTGATCGGAGCTTGT+CGG | + | chr1.2:1000547-1000566 | MS.gene24166:CDS | 40.0% | |
AGCGCATATTAACTCACACT+AGG | + | chr1.2:1003766-1003785 | MS.gene24166:intron | 40.0% | |
ATAAAGTTCCCATGGAGATG+GGG | + | chr1.2:1002932-1002951 | MS.gene24166:intron | 40.0% | |
ATAGCATTCATACGCTGGAT+AGG | - | chr1.2:1000012-1000031 | None:intergenic | 40.0% | |
ATGACAGTGTGTGAGAGATT+TGG | + | chr1.2:1000210-1000229 | MS.gene24166:CDS | 40.0% | |
ATGCTTATAGGCAGTGTTTG+TGG | + | chr1.2:1004837-1004856 | MS.gene24166:intron | 40.0% | |
ATTTAGCTGACCCTACTTAG+TGG | + | chr1.2:999876-999895 | MS.gene24166:intron | 40.0% | |
CACCCTAAATGTCAGCTTAT+TGG | - | chr1.2:1002765-1002784 | None:intergenic | 40.0% | |
CAGATGAAGGATTAGACTTC+TGG | - | chr1.2:1001762-1001781 | None:intergenic | 40.0% | |
CAGGTAGTTGCTATAACTGT+TGG | + | chr1.2:1004341-1004360 | MS.gene24166:intron | 40.0% | |
CCGAATACTTTCTTCCATTC+TGG | - | chr1.2:1001899-1001918 | None:intergenic | 40.0% | |
CTACTTAGTGGGATAAGACT+TGG | + | chr1.2:999888-999907 | MS.gene24166:intron | 40.0% | |
CTGACATGTACAACTTGTCA+AGG | + | chr1.2:1005597-1005616 | MS.gene24166:CDS | 40.0% | |
CTGTTGTAGTGTAATGTGCA+AGG | + | chr1.2:1004730-1004749 | MS.gene24166:intron | 40.0% | |
GAATAAAGTTCCCATGGAGA+TGG | + | chr1.2:1002930-1002949 | MS.gene24166:intron | 40.0% | |
GACTCTGGTAATATGGAGTT+CGG | + | chr1.2:1004930-1004949 | MS.gene24166:intron | 40.0% | |
GATAGGATCCTTTCTTACCT+GGG | + | chr1.2:999760-999779 | MS.gene24166:CDS | 40.0% | |
GATGGGATGGATATTTGCAT+CGG | + | chr1.2:1002136-1002155 | MS.gene24166:intron | 40.0% | |
GGAAAGAGACTCTGGTAATA+TGG | + | chr1.2:1004923-1004942 | MS.gene24166:intron | 40.0% | |
GGTAATGTGACTGTTGAACT+TGG | + | chr1.2:1005522-1005541 | MS.gene24166:CDS | 40.0% | |
GTAGTTAAACCAGCTATAGG+AGG | - | chr1.2:1001709-1001728 | None:intergenic | 40.0% | |
TACAAGTTAAGTAGGTTGCC+AGG | - | chr1.2:1001319-1001338 | None:intergenic | 40.0% | |
TCCTCTTCAGCAACTGAAAA+TGG | + | chr1.2:1001850-1001869 | MS.gene24166:CDS | 40.0% | |
TCGATGTTTAGCCGGAAATA+GGG | + | chr1.2:1001977-1001996 | MS.gene24166:intron | 40.0% | |
TCTCGCTGCATAAATTGTGA+TGG | + | chr1.2:1005564-1005583 | MS.gene24166:CDS | 40.0% | |
TGATAGGATCCTTTCTTACC+TGG | + | chr1.2:999759-999778 | MS.gene24166:CDS | 40.0% | |
TGGTAATATGGAGTTCGGTT+GGG | + | chr1.2:1004935-1004954 | MS.gene24166:intron | 40.0% | |
TGTACAACTTGTCAAGGATC+TGG | + | chr1.2:1005603-1005622 | MS.gene24166:CDS | 40.0% | |
TGTTTAAACCTGCAACAGGA+GGG | - | chr1.2:1001618-1001637 | None:intergenic | 40.0% | |
TTATGGCAACAACAACAACC+TGG | + | chr1.2:1001298-1001317 | MS.gene24166:intron | 40.0% | |
TTGGAGGAAAATGGGAGAAA+GGG | + | chr1.2:1001192-1001211 | MS.gene24166:intron | 40.0% | |
TTGTTTAAACCTGCAACAGG+AGG | - | chr1.2:1001619-1001638 | None:intergenic | 40.0% | |
TTTAGCTGACCCTACTTAGT+GGG | + | chr1.2:999877-999896 | MS.gene24166:intron | 40.0% | |
TTTGTGGTACCCCAAAACAA+AGG | + | chr1.2:1000381-1000400 | MS.gene24166:CDS | 40.0% | |
! | AATCTAGGGCGATTTGAACT+AGG | + | chr1.2:1000842-1000861 | MS.gene24166:intron | 40.0% |
! | ATTTTCAGTTGCTGAAGAGG+AGG | - | chr1.2:1001851-1001870 | None:intergenic | 40.0% |
! | CAAAGAAATGGGCTTTGTGT+TGG | + | chr1.2:1003849-1003868 | MS.gene24166:intron | 40.0% |
! | CAAGTCTTATCCCACTAAGT+AGG | - | chr1.2:999890-999909 | None:intergenic | 40.0% |
! | CATCGACAATTTTGTGCTAC+TGG | - | chr1.2:1001963-1001982 | None:intergenic | 40.0% |
! | CGTGGATAAAATGTGGGTTT+TGG | - | chr1.2:1004201-1004220 | None:intergenic | 40.0% |
! | CTGCATAAATTGTGATGGTG+CGG | + | chr1.2:1005569-1005588 | MS.gene24166:CDS | 40.0% |
! | CTTGATGACAACTTCATTGC+AGG | + | chr1.2:1002361-1002380 | MS.gene24166:intron | 40.0% |
! | GGCTCATGTTTTGCAACATA+TGG | - | chr1.2:1000527-1000546 | None:intergenic | 40.0% |
! | TCCATTTTCAGTTGCTGAAG+AGG | - | chr1.2:1001854-1001873 | None:intergenic | 40.0% |
! | TCCCAGGAACATTTTATACC+TGG | - | chr1.2:1002880-1002899 | None:intergenic | 40.0% |
! | TGCATAAATTGTGATGGTGC+GGG | + | chr1.2:1005570-1005589 | MS.gene24166:CDS | 40.0% |
!! | AACTGTTGGTGTTTTGAGTG+TGG | + | chr1.2:1004355-1004374 | MS.gene24166:CDS | 40.0% |
!! | AGAAAGTATTCGGGTTACAC+GGG | + | chr1.2:1001906-1001925 | MS.gene24166:CDS | 40.0% |
!! | TGCAGATTTTGTTTGGGAAC+CGG | + | chr1.2:1005501-1005520 | MS.gene24166:CDS | 40.0% |
!!! | AATATGCGCTTGTTTTAGGC+AGG | - | chr1.2:1003756-1003775 | None:intergenic | 40.0% |
!!! | TGTAATGGCAGGAGTGTTTT+TGG | + | chr1.2:999981-1000000 | MS.gene24166:intron | 40.0% |
!!! | TTCGATTTTGGTGCCAGTAT+TGG | + | chr1.2:1000069-1000088 | MS.gene24166:CDS | 40.0% |
AACCTCGTTACCTTGATCGT+AGG | + | chr1.2:1005631-1005650 | MS.gene24166:CDS | 45.0% | |
ACTTCATTGCAGGAGCAAGT+AGG | + | chr1.2:1002371-1002390 | MS.gene24166:intron | 45.0% | |
CATTATTGCCATGGCACGAA+GGG | - | chr1.2:1003270-1003289 | None:intergenic | 45.0% | |
CGTTACCTTGATCGTAGGTA+CGG | + | chr1.2:1005636-1005655 | MS.gene24166:intron | 45.0% | |
CTGGTAATATGGAGTTCGGT+TGG | + | chr1.2:1004934-1004953 | MS.gene24166:intron | 45.0% | |
CTTAACCGTCATGTTCTCGA+GGG | + | chr1.2:1004902-1004921 | MS.gene24166:intron | 45.0% | |
CTTGAAATTGCAGCAACGAC+CGG | + | chr1.2:1001423-1001442 | MS.gene24166:intron | 45.0% | |
CTTGTCGGAACTAAGGACAA+GGG | + | chr1.2:1000562-1000581 | MS.gene24166:CDS | 45.0% | |
GACAAGCTCCGATCAATTTC+TGG | - | chr1.2:1000548-1000567 | None:intergenic | 45.0% | |
GCAACCAAAATCCTGCAACA+TGG | - | chr1.2:1000186-1000205 | None:intergenic | 45.0% | |
GCGATGCTTATGATTGTGTC+TGG | + | chr1.2:1005360-1005379 | MS.gene24166:intron | 45.0% | |
GTCGATGTTTAGCCGGAAAT+AGG | + | chr1.2:1001976-1001995 | MS.gene24166:intron | 45.0% | |
GTGACAGCTTCACCACTAAA+TGG | + | chr1.2:1003975-1003994 | MS.gene24166:intron | 45.0% | |
GTTGGAGGAAAATGGGAGAA+AGG | + | chr1.2:1001191-1001210 | MS.gene24166:intron | 45.0% | |
GTTTAAACCTGCAACAGGAG+GGG | - | chr1.2:1001617-1001636 | None:intergenic | 45.0% | |
TACCTACGATCAAGGTAACG+AGG | - | chr1.2:1005636-1005655 | None:intergenic | 45.0% | |
TCATTATTGCCATGGCACGA+AGG | - | chr1.2:1003271-1003290 | None:intergenic | 45.0% | |
TCTTAACCGTCATGTTCTCG+AGG | + | chr1.2:1004901-1004920 | MS.gene24166:intron | 45.0% | |
TCTTTCCCTCGAGAACATGA+CGG | - | chr1.2:1004910-1004929 | None:intergenic | 45.0% | |
TGGTCCAACTACCCTATTTC+CGG | - | chr1.2:1001991-1002010 | None:intergenic | 45.0% | |
TGGTGGGAATAAAGTTCCCA+TGG | + | chr1.2:1002924-1002943 | MS.gene24166:intron | 45.0% | |
TGTAAAGGAGGAGACCAGAA+TGG | + | chr1.2:1001882-1001901 | MS.gene24166:CDS | 45.0% | |
TTAGCCGGAAATAGGGTAGT+TGG | + | chr1.2:1001984-1002003 | MS.gene24166:intron | 45.0% | |
TTGAAATTGCAGCAACGACC+GGG | + | chr1.2:1001424-1001443 | MS.gene24166:intron | 45.0% | |
TTGAGTGTGGCTGTTGGAAT+TGG | + | chr1.2:1004368-1004387 | MS.gene24166:CDS | 45.0% | |
! | AACTTGTGGTTCTGTAGCAG+CGG | - | chr1.2:1001497-1001516 | None:intergenic | 45.0% |
! | CTGACTTGAAGTTGTGCTAG+AGG | - | chr1.2:1001539-1001558 | None:intergenic | 45.0% |
! | GACTTGGTTGTTGTTGTGTC+TGG | + | chr1.2:999904-999923 | MS.gene24166:intron | 45.0% |
! | GCTGACATTTAGGGTGTGTT+TGG | + | chr1.2:1002769-1002788 | MS.gene24166:intron | 45.0% |
! | TTGTCCTTTGGTGTAATGGC+AGG | + | chr1.2:999970-999989 | MS.gene24166:intron | 45.0% |
!! | GAAAGTATTCGGGTTACACG+GGG | + | chr1.2:1001907-1001926 | MS.gene24166:CDS | 45.0% |
!! | TGAATGGAGGAGCATTATGG+AGG | + | chr1.2:1004638-1004657 | MS.gene24166:intron | 45.0% |
!! | TGTGCCGGTTACTAGACATT+AGG | + | chr1.2:1005389-1005408 | MS.gene24166:intron | 45.0% |
!!! | CTATTTTTTATTTTATTTAT+AGG | - | chr1.2:1003876-1003895 | None:intergenic | 5.0% |
!!! | TTATTATTTTAACTTTTTAT+CGG | + | chr1.2:1005112-1005131 | MS.gene24166:intron | 5.0% |
AACCAGAAGCCTCCTATAGC+TGG | + | chr1.2:1001697-1001716 | MS.gene24166:CDS | 50.0% | |
AACCAGCTATAGGAGGCTTC+TGG | - | chr1.2:1001702-1001721 | None:intergenic | 50.0% | |
AATAGAAGCCCTTCGTGCCA+TGG | + | chr1.2:1003259-1003278 | MS.gene24166:intron | 50.0% | |
AGAACCATTGCATGGGAAGC+AGG | - | chr1.2:1004560-1004579 | None:intergenic | 50.0% | |
ATCGGAGCTTGTCGGAACTA+AGG | + | chr1.2:1000555-1000574 | MS.gene24166:CDS | 50.0% | |
CACTCCTGCCATTACACCAA+AGG | - | chr1.2:999977-999996 | None:intergenic | 50.0% | |
CATTGCAGGAGCAAGTAGGA+AGG | + | chr1.2:1002375-1002394 | MS.gene24166:intron | 50.0% | |
CGTGAAGACCTGCTATACAG+AGG | - | chr1.2:1002164-1002183 | None:intergenic | 50.0% | |
CTACTGGGTTCCTACTGATC+TGG | - | chr1.2:1001947-1001966 | None:intergenic | 50.0% | |
CTTGAAGTTGTGCTAGAGGC+AGG | - | chr1.2:1001535-1001554 | None:intergenic | 50.0% | |
GAACACCGTACCTACGATCA+AGG | - | chr1.2:1005644-1005663 | None:intergenic | 50.0% | |
GAACCATTGCATGGGAAGCA+GGG | - | chr1.2:1004559-1004578 | None:intergenic | 50.0% | |
GAGCTCCAGAACCATTGCAT+GGG | - | chr1.2:1004567-1004586 | None:intergenic | 50.0% | |
GATGGGGGTTCTTCAACTTG+TGG | - | chr1.2:1001511-1001530 | None:intergenic | 50.0% | |
GCAAGTAGGAAGGTGAAGTG+TGG | + | chr1.2:1002385-1002404 | MS.gene24166:intron | 50.0% | |
GCTGTCACAACCACATGACA+TGG | - | chr1.2:1003963-1003982 | None:intergenic | 50.0% | |
GCTTGTCGGAACTAAGGACA+AGG | + | chr1.2:1000561-1000580 | MS.gene24166:CDS | 50.0% | |
TGAAACTTACACAAGCGCCC+AGG | - | chr1.2:999780-999799 | None:intergenic | 50.0% | |
TGCTTCCCATGCAATGGTTC+TGG | + | chr1.2:1004559-1004578 | MS.gene24166:CDS | 50.0% | |
TTCTCGAGGGAAAGAGACTC+TGG | + | chr1.2:1004915-1004934 | MS.gene24166:intron | 50.0% | |
TTGTGCTAGAGGCAGGAGAT+GGG | - | chr1.2:1001528-1001547 | None:intergenic | 50.0% | |
! | CTAAGTCAAAGGGAGTGTGG+AGG | + | chr1.2:1005187-1005206 | MS.gene24166:intron | 50.0% |
! | GCTCTAAGTCAAAGGGAGTG+TGG | + | chr1.2:1005184-1005203 | MS.gene24166:intron | 50.0% |
! | GGGCTGCGTGTTATCTCTTT+TGG | - | chr1.2:1004539-1004558 | None:intergenic | 50.0% |
! | TGAACTTGGTGGAGCTGAGA+CGG | + | chr1.2:1005536-1005555 | MS.gene24166:CDS | 50.0% |
! | TGTGTCTGGTTGCTTTGTGC+CGG | + | chr1.2:1005374-1005393 | MS.gene24166:intron | 50.0% |
!! | GGTGTTTTGAGTGTGGCTGT+TGG | + | chr1.2:1004362-1004381 | MS.gene24166:CDS | 50.0% |
AAAGTAGCCCCTCCTGTTGC+AGG | + | chr1.2:1001607-1001626 | MS.gene24166:CDS | 55.0% | |
AAGCAGCTACAGGAGGCTTC+TGG | - | chr1.2:1001672-1001691 | None:intergenic | 55.0% | |
ATGCACACAATGGAGCCACG+TGG | + | chr1.2:1003921-1003940 | MS.gene24166:intron | 55.0% | |
ATTGCAGCAACGACCGGGAT+CGG | + | chr1.2:1001429-1001448 | MS.gene24166:intron | 55.0% | |
CACAAGCGCCCAGGTAAGAA+AGG | - | chr1.2:999771-999790 | None:intergenic | 55.0% | |
CGAGCTCCAGAACCATTGCA+TGG | - | chr1.2:1004568-1004587 | None:intergenic | 55.0% | |
CGTAAACCTGCACCTGCCAA+GGG | + | chr1.2:1001463-1001482 | MS.gene24166:CDS | 55.0% | |
GTCGGAACTAAGGACAAGGG+CGG | + | chr1.2:1000565-1000584 | MS.gene24166:CDS | 55.0% | |
GTTGTGCTAGAGGCAGGAGA+TGG | - | chr1.2:1001529-1001548 | None:intergenic | 55.0% | |
TCGGAACTAAGGACAAGGGC+GGG | + | chr1.2:1000566-1000585 | MS.gene24166:CDS | 55.0% | |
TCGTAAACCTGCACCTGCCA+AGG | + | chr1.2:1001462-1001481 | MS.gene24166:CDS | 55.0% | |
TGTGCTAGAGGCAGGAGATG+GGG | - | chr1.2:1001527-1001546 | None:intergenic | 55.0% | |
! | GCAACAGGAGGGGCTACTTT+AGG | - | chr1.2:1001607-1001626 | None:intergenic | 55.0% |
! | GGGGCTACTTTAGGAGCTTG+TGG | - | chr1.2:1001598-1001617 | None:intergenic | 55.0% |
!! | CATCGGCTCCTCTGTATAGC+AGG | + | chr1.2:1002153-1002172 | MS.gene24166:intron | 55.0% |
!! | TGAACTACCTGAGCGGACTG+AGG | - | chr1.2:1000689-1000708 | None:intergenic | 55.0% |
CAGCCCTGCTTCCCATGCAA+TGG | + | chr1.2:1004553-1004572 | MS.gene24166:CDS | 60.0% | |
CGAACTCTCACACCCGATCC+CGG | - | chr1.2:1001445-1001464 | None:intergenic | 60.0% | |
GTGCTAGAGGCAGGAGATGG+GGG | - | chr1.2:1001526-1001545 | None:intergenic | 60.0% | |
GTTCTGTAGCAGCGGCTGGT+TGG | - | chr1.2:1001489-1001508 | None:intergenic | 60.0% | |
TTGCAGCAACGACCGGGATC+GGG | + | chr1.2:1001430-1001449 | MS.gene24166:intron | 60.0% | |
! | ACTTGGTGGAGCTGAGACGG+AGG | + | chr1.2:1005539-1005558 | MS.gene24166:CDS | 60.0% |
! | TGTGGTTCTGTAGCAGCGGC+TGG | - | chr1.2:1001493-1001512 | None:intergenic | 60.0% |
ACCAGCACCTCAGTCCGCTC+AGG | + | chr1.2:1000679-1000698 | MS.gene24166:CDS | 65.0% | |
!! | ACCTGAGCGGACTGAGGTGC+TGG | - | chr1.2:1000683-1000702 | None:intergenic | 65.0% |
! | AGCAGCGGCTGGTTGGCCCT+TGG | - | chr1.2:1001482-1001501 | None:intergenic | 70.0% |
! | GGTTGGCCCTTGGCAGGTGC+AGG | - | chr1.2:1001472-1001491 | None:intergenic | 70.0% |
! | GCGGCTGGTTGGCCCTTGGC+AGG | - | chr1.2:1001478-1001497 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 999758 | 1005825 | 999758 | ID=MS.gene24166 |
chr1.2 | mRNA | 999758 | 1005825 | 999758 | ID=MS.gene24166.t1;Parent=MS.gene24166 |
chr1.2 | exon | 999758 | 999789 | 999758 | ID=MS.gene24166.t1.exon1;Parent=MS.gene24166.t1 |
chr1.2 | CDS | 999758 | 999789 | 999758 | ID=cds.MS.gene24166.t1;Parent=MS.gene24166.t1 |
chr1.2 | exon | 999992 | 1000090 | 999992 | ID=MS.gene24166.t1.exon2;Parent=MS.gene24166.t1 |
chr1.2 | CDS | 999992 | 1000090 | 999992 | ID=cds.MS.gene24166.t1;Parent=MS.gene24166.t1 |
chr1.2 | exon | 1000194 | 1000250 | 1000194 | ID=MS.gene24166.t1.exon3;Parent=MS.gene24166.t1 |
chr1.2 | CDS | 1000194 | 1000250 | 1000194 | ID=cds.MS.gene24166.t1;Parent=MS.gene24166.t1 |
chr1.2 | exon | 1000339 | 1000402 | 1000339 | ID=MS.gene24166.t1.exon4;Parent=MS.gene24166.t1 |
chr1.2 | CDS | 1000339 | 1000402 | 1000339 | ID=cds.MS.gene24166.t1;Parent=MS.gene24166.t1 |
chr1.2 | exon | 1000491 | 1000700 | 1000491 | ID=MS.gene24166.t1.exon5;Parent=MS.gene24166.t1 |
chr1.2 | CDS | 1000491 | 1000700 | 1000491 | ID=cds.MS.gene24166.t1;Parent=MS.gene24166.t1 |
chr1.2 | exon | 1001436 | 1001951 | 1001436 | ID=MS.gene24166.t1.exon6;Parent=MS.gene24166.t1 |
chr1.2 | CDS | 1001436 | 1001951 | 1001436 | ID=cds.MS.gene24166.t1;Parent=MS.gene24166.t1 |
chr1.2 | exon | 1004344 | 1004427 | 1004344 | ID=MS.gene24166.t1.exon7;Parent=MS.gene24166.t1 |
chr1.2 | CDS | 1004344 | 1004427 | 1004344 | ID=cds.MS.gene24166.t1;Parent=MS.gene24166.t1 |
chr1.2 | exon | 1004535 | 1004586 | 1004535 | ID=MS.gene24166.t1.exon8;Parent=MS.gene24166.t1 |
chr1.2 | CDS | 1004535 | 1004586 | 1004535 | ID=cds.MS.gene24166.t1;Parent=MS.gene24166.t1 |
chr1.2 | exon | 1005496 | 1005652 | 1005496 | ID=MS.gene24166.t1.exon9;Parent=MS.gene24166.t1 |
chr1.2 | CDS | 1005496 | 1005652 | 1005496 | ID=cds.MS.gene24166.t1;Parent=MS.gene24166.t1 |
chr1.2 | exon | 1005804 | 1005825 | 1005804 | ID=MS.gene24166.t1.exon10;Parent=MS.gene24166.t1 |
chr1.2 | CDS | 1005804 | 1005825 | 1005804 | ID=cds.MS.gene24166.t1;Parent=MS.gene24166.t1 |
Gene Sequence |
Protein sequence |