AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene24347

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24347.t1 MTR_1g021320 93.728 287 13 1 1 287 464 745 0.0 546
MS.gene24347.t1 MTR_1g021320 50.000 132 65 1 20 150 707 838 2.19e-35 135
MS.gene24347.t1 MTR_1g021270 78.397 287 62 0 1 287 213 499 3.87e-160 459
MS.gene24347.t1 MTR_1g021270 50.000 130 65 0 19 148 460 589 3.63e-38 142
MS.gene24347.t1 MTR_1g021360 77.419 124 27 1 19 141 349 472 4.07e-64 209
MS.gene24347.t1 MTR_1g021295 67.361 144 46 1 1 143 74 217 2.62e-63 199
MS.gene24347.t1 MTR_1g021440 69.403 134 40 1 17 149 254 387 1.28e-62 202
MS.gene24347.t1 MTR_1g021440 69.697 132 39 1 19 149 238 369 1.64e-62 202
MS.gene24347.t1 MTR_1g021330 63.780 127 46 0 23 149 244 370 6.21e-52 174
MS.gene24347.t1 MTR_1g021435 51.493 134 54 2 28 150 234 367 4.05e-41 146
MS.gene24347.t1 MTR_1g021400 51.515 132 64 0 19 150 232 363 4.27e-40 143
MS.gene24347.t1 MTR_1g021400 27.413 259 163 8 40 287 27 271 2.32e-11 63.9
MS.gene24347.t1 MTR_1g021380 51.538 130 58 2 28 155 224 350 5.75e-38 137
MS.gene24347.t1 MTR_1g021410 52.101 119 57 0 32 150 238 356 1.22e-36 134
MS.gene24347.t1 MTR_1g021350 68.966 87 25 1 65 149 247 333 1.04e-31 120
MS.gene24347.t1 MTR_6g036740 60.714 84 31 2 62 143 109 192 4.86e-27 108
MS.gene24347.t1 MTR_7g050710 42.574 101 53 2 31 126 194 294 7.68e-13 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 53 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCCTTCCCACTTCTATTC+AGG 0.256160 1.2:+3347546 None:intergenic
TGTTGAACGTCCACGTATTC+TGG 0.284407 1.2:-3347402 MS.gene24347:intron
ACTTGCATGCAATCTAGTTC+TGG 0.342898 1.2:+3346592 None:intergenic
ATGTTTCTTCGGCATAAATC+TGG 0.355077 1.2:+3346367 None:intergenic
GCATAAATCTGGAAGTCTTA+TGG 0.355261 1.2:+3346378 None:intergenic
ATAATCTTTATCTTGCAGTT+TGG 0.369783 1.2:+3346659 None:intergenic
ATCAATGAGGTTGGAAAAGA+TGG 0.373789 1.2:-3346464 MS.gene24347:CDS
TACAGACATCTCCAATCTTT+AGG 0.410316 1.2:+3346525 None:intergenic
TCCTCTGAGTTAAAGAAATC+CGG 0.424652 1.2:-3346266 MS.gene24347:CDS
CGAAGTATTTGAAGCTCTAC+CGG 0.428217 1.2:+3346247 None:intergenic
TTTAACAAAATATGGAAAAG+AGG 0.438354 1.2:+3347442 None:intergenic
TGATCCTTCGAAAATTCATA+TGG 0.444278 1.2:+3346686 None:intergenic
GAAAAGAGGAGGTAAATGAT+TGG 0.467251 1.2:+3347456 None:intergenic
CTTGCATGCAATCTAGTTCT+GGG 0.481188 1.2:+3346593 None:intergenic
CGTGTTCGCATCAATGAGGT+TGG 0.490884 1.2:-3346473 MS.gene24347:CDS
TAGTATGCTTAGTGCAAGAC+AGG 0.498724 1.2:-3346411 MS.gene24347:CDS
AAAAGATGGGTTAGACTCCC+AGG 0.502465 1.2:-3346450 MS.gene24347:CDS
TCAAATACTTCGAAGAAGGC+AGG 0.504134 1.2:-3346236 MS.gene24347:CDS
GATTATTCTTCATAATTTGA+AGG 0.504582 1.2:-3346642 MS.gene24347:CDS
CGTGGCAATAGCCTAAAGAT+TGG 0.505082 1.2:-3346536 MS.gene24347:CDS
AAAAGAGGAGGTAAATGATT+GGG 0.509472 1.2:+3347457 None:intergenic
ATTATTCTTCATAATTTGAA+GGG 0.512712 1.2:-3346641 MS.gene24347:CDS
AGGAAACACCATGTTGATGA+TGG 0.520128 1.2:-3345899 MS.gene24347:CDS
CTTCCCACTTCTATTCAGGA+TGG 0.529191 1.2:+3347550 None:intergenic
AGCTTCAAATACTTCGAAGA+AGG 0.556522 1.2:-3346240 MS.gene24347:CDS
AATAGAAGTGGGAAGGCAGA+TGG 0.559991 1.2:-3347542 MS.gene24347:CDS
TTTCAAACTATCATTAGCCT+GGG 0.560665 1.2:+3345868 None:intergenic
AGTTCTGGGAACAGAATTGA+CGG 0.562112 1.2:+3346607 None:intergenic
GCTATCTCTTTCTCATCATG+TGG 0.571214 1.2:+3347479 None:intergenic
ATGAAGAAGTTCAATGTCTG+TGG 0.577831 1.2:-3345773 MS.gene24347:CDS
AAGCTCCACTGAGAATATCA+TGG 0.579465 1.2:+3347519 None:intergenic
CAAATACTTCGAAGAAGGCA+GGG 0.582811 1.2:-3346235 MS.gene24347:CDS
TCATCAACATGGTGTTTCCT+CGG 0.584118 1.2:+3345902 None:intergenic
AACAAAATATGGAAAAGAGG+AGG 0.585641 1.2:+3347445 None:intergenic
TTTCACAAAATATGGAAATG+GGG 0.587903 1.2:+3345799 None:intergenic
GTCACATTCTATGCGGAGGA+TGG 0.588116 1.2:-3346571 MS.gene24347:CDS
ACCGGATTTCTTTAACTCAG+AGG 0.593709 1.2:+3346265 None:intergenic
GCAGCCATCCTGAATAGAAG+TGG 0.595897 1.2:-3347554 MS.gene24347:CDS
GATGGGTTAGACTCCCAGGT+TGG 0.599922 1.2:-3346446 MS.gene24347:CDS
TGATGATGGACTAAGCTCCC+AGG 0.628271 1.2:-3345885 MS.gene24347:CDS
CATCCTGAATAGAAGTGGGA+AGG 0.628564 1.2:-3347549 MS.gene24347:CDS
GAACAACTCACCAGAATACG+TGG 0.631909 1.2:+3347392 None:intergenic
ATTACGTGTTCGCATCAATG+AGG 0.634490 1.2:-3346477 MS.gene24347:CDS
CAGCCATCCTGAATAGAAGT+GGG 0.642084 1.2:-3347553 MS.gene24347:CDS
TCAATGAGGTTGGAAAAGAT+GGG 0.644296 1.2:-3346463 MS.gene24347:CDS
AGCTTAGTCCATCATCAACA+TGG 0.648752 1.2:+3345891 None:intergenic
GCAAGTCACATTCTATGCGG+AGG 0.649025 1.2:-3346575 MS.gene24347:CDS
ATAATTTGAAGGGAGAACAG+TGG 0.652096 1.2:-3346631 MS.gene24347:CDS
GATGGCCATGATATTCTCAG+TGG 0.691057 1.2:-3347524 MS.gene24347:CDS
TGTCTGTGGATCATACACTT+TGG 0.709889 1.2:-3345759 None:intergenic
AAACAAAGACAGCTGTACCG+AGG 0.720792 1.2:-3345919 MS.gene24347:intron
CATGCAAGTCACATTCTATG+CGG 0.736069 1.2:-3346578 MS.gene24347:CDS
AATCAGCTCAAAGTGCAGTG+CGG 0.745608 1.2:-3346342 MS.gene24347:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCATTATTTTAACAAAATA+TGG + chr1.2:3345883-3345902 None:intergenic 10.0%
!!! TTTTTGTTTTAAGTTTATTT+GGG - chr1.2:3346502-3346521 MS.gene24347:CDS 10.0%
!!! TTTTTTGTTTTAAGTTTATT+TGG - chr1.2:3346501-3346520 MS.gene24347:CDS 10.0%
!! AAAACAAAAAATATTTGAGA+AGG + chr1.2:3346492-3346511 None:intergenic 15.0%
!! ATAAAAGTAGAAATATTGTT+TGG + chr1.2:3346075-3346094 None:intergenic 15.0%
!! ATTATTCTTCATAATTTGAA+GGG - chr1.2:3346673-3346692 MS.gene24347:CDS 15.0%
!!! AATATTTCTACTTTTATGTA+TGG - chr1.2:3346078-3346097 MS.gene24347:intron 15.0%
!!! GAAGAATATAATTCAATTTT+CGG - chr1.2:3347255-3347274 MS.gene24347:intron 15.0%
!! AATAAAAATTACCATCTACT+GGG + chr1.2:3347163-3347182 None:intergenic 20.0%
!! AGAGATAAAACAACATTATT+TGG + chr1.2:3345973-3345992 None:intergenic 20.0%
!! ATTGTGATAACAATAACAAT+TGG + chr1.2:3346421-3346440 None:intergenic 20.0%
!! CGTTGAATAAAAACATTTAA+GGG + chr1.2:3346450-3346469 None:intergenic 20.0%
!! GAGATAAAACAACATTATTT+GGG + chr1.2:3345972-3345991 None:intergenic 20.0%
!! GATTATTCTTCATAATTTGA+AGG - chr1.2:3346672-3346691 MS.gene24347:CDS 20.0%
!! TTTAACAAAATATGGAAAAG+AGG + chr1.2:3345875-3345894 None:intergenic 20.0%
!!! ATTTTCACAAAATATGGAAA+TGG + chr1.2:3347520-3347539 None:intergenic 20.0%
!!! CCTTAAATGTTTTTATTCAA+CGG - chr1.2:3346448-3346467 MS.gene24347:CDS 20.0%
!!! TCTTTGTTTACAGTTAAAAT+GGG + chr1.2:3347384-3347403 None:intergenic 20.0%
!!! TTCATGATTTTCACAAAATA+TGG + chr1.2:3347526-3347545 None:intergenic 20.0%
!!! TTTTCACAAAATATGGAAAT+GGG + chr1.2:3347519-3347538 None:intergenic 20.0%
! AGTATTCAACATTTATCCTT+TGG + chr1.2:3347321-3347340 None:intergenic 25.0%
! ATAAAACAACATTATTTGGG+AGG + chr1.2:3345969-3345988 None:intergenic 25.0%
! ATAATCTTTATCTTGCAGTT+TGG + chr1.2:3346658-3346677 None:intergenic 25.0%
! CAATAAAAATTACCATCTAC+TGG + chr1.2:3347164-3347183 None:intergenic 25.0%
! CATTAATTAGGATGGAATTA+TGG + chr1.2:3346179-3346198 None:intergenic 25.0%
! CCGTTGAATAAAAACATTTA+AGG + chr1.2:3346451-3346470 None:intergenic 25.0%
! GAATAAAAACATTTAAGGGA+AGG + chr1.2:3346446-3346465 None:intergenic 25.0%
! GTAAATTGAGAATCACAAAA+GGG + chr1.2:3345947-3345966 None:intergenic 25.0%
! GTATTCAACATTTATCCTTT+GGG + chr1.2:3347320-3347339 None:intergenic 25.0%
! TTTCACAAAATATGGAAATG+GGG + chr1.2:3347518-3347537 None:intergenic 25.0%
!! GTCTTTGTTTACAGTTAAAA+TGG + chr1.2:3347385-3347404 None:intergenic 25.0%
!! TATTCCATATGAATTTTCGA+AGG - chr1.2:3346624-3346643 MS.gene24347:CDS 25.0%
!!! ATTTCTACTTTTATGTATGG+AGG - chr1.2:3346081-3346100 MS.gene24347:intron 25.0%
!!! TGGAAGGTAGAAATTTTTTA+AGG + chr1.2:3347346-3347365 None:intergenic 25.0%
!!! TTCCTAATACCGATTTATAA+TGG - chr1.2:3346588-3346607 MS.gene24347:CDS 25.0%
AAAAGAGGAGGTAAATGATT+GGG + chr1.2:3345860-3345879 None:intergenic 30.0%
AACAAAATATGGAAAAGAGG+AGG + chr1.2:3345872-3345891 None:intergenic 30.0%
AATTAGGATGGAATTATGGA+TGG + chr1.2:3346175-3346194 None:intergenic 30.0%
CAATAACAATTGGTACTTCT+TGG + chr1.2:3346411-3346430 None:intergenic 30.0%
CCTAATTAATGAGTCAATCT+TGG - chr1.2:3346188-3346207 MS.gene24347:intron 30.0%
GCATTGTGTCCATTATAAAT+CGG + chr1.2:3346600-3346619 None:intergenic 30.0%
GGTAAATTGAGAATCACAAA+AGG + chr1.2:3345948-3345967 None:intergenic 30.0%
GTCCATTATAAATCGGTATT+AGG + chr1.2:3346593-3346612 None:intergenic 30.0%
TGATCCTTCGAAAATTCATA+TGG + chr1.2:3346631-3346650 None:intergenic 30.0%
! CCAAGATTGACTCATTAATT+AGG + chr1.2:3346191-3346210 None:intergenic 30.0%
! GATTGACTCATTAATTAGGA+TGG + chr1.2:3346187-3346206 None:intergenic 30.0%
! GTCTGTATTTTCGAACTTAT+AGG - chr1.2:3346805-3346824 MS.gene24347:intron 30.0%
! TTTCAAACTATCATTAGCCT+GGG + chr1.2:3347449-3347468 None:intergenic 30.0%
! TTTTCAAACTATCATTAGCC+TGG + chr1.2:3347450-3347469 None:intergenic 30.0%
!! GAGCTGATTTTATGTTTCTT+CGG + chr1.2:3346961-3346980 None:intergenic 30.0%
AAAAGCTGCCCATAAAAAGT+CGG - chr1.2:3347116-3347135 MS.gene24347:intron 35.0%
AATGTGTTATGTCATAGCAG+TGG + chr1.2:3346352-3346371 None:intergenic 35.0%
AGCTTCAAATACTTCGAAGA+AGG - chr1.2:3347074-3347093 MS.gene24347:intron 35.0%
ATAATTTGAAGGGAGAACAG+TGG - chr1.2:3346683-3346702 MS.gene24347:CDS 35.0%
ATCAATGAGGTTGGAAAAGA+TGG - chr1.2:3346850-3346869 MS.gene24347:intron 35.0%
ATGAAGAAGTTCAATGTCTG+TGG - chr1.2:3347541-3347560 MS.gene24347:CDS 35.0%
ATGGGACTGAAGTCATAATT+TGG + chr1.2:3347366-3347385 None:intergenic 35.0%
ATGTTTCTTCGGCATAAATC+TGG + chr1.2:3346950-3346969 None:intergenic 35.0%
ATTTCAATACCTAGCGAAGA+TGG - chr1.2:3346260-3346279 MS.gene24347:CDS 35.0%
ATTTGCACTTCAATGCATGT+TGG - chr1.2:3346231-3346250 MS.gene24347:CDS 35.0%
GAAAAGAGGAGGTAAATGAT+TGG + chr1.2:3345861-3345880 None:intergenic 35.0%
GACTGAAGTCATAATTTGGA+AGG + chr1.2:3347362-3347381 None:intergenic 35.0%
GCATAAATCTGGAAGTCTTA+TGG + chr1.2:3346939-3346958 None:intergenic 35.0%
GCTTGAGAAACTGATATTGT+TGG - chr1.2:3346032-3346051 MS.gene24347:intron 35.0%
TACAGACATCTCCAATCTTT+AGG + chr1.2:3346792-3346811 None:intergenic 35.0%
TAGTGAAAGAAAGAACCCAA+AGG - chr1.2:3347302-3347321 MS.gene24347:intron 35.0%
TCAATGAGGTTGGAAAAGAT+GGG - chr1.2:3346851-3346870 MS.gene24347:intron 35.0%
TCCTCTGAGTTAAAGAAATC+CGG - chr1.2:3347048-3347067 MS.gene24347:intron 35.0%
TTATGTCATAGCAGTGGAAA+AGG + chr1.2:3346346-3346365 None:intergenic 35.0%
! AAACCATACCCGACTTTTTA+TGG + chr1.2:3347128-3347147 None:intergenic 35.0%
! AACCATACCCGACTTTTTAT+GGG + chr1.2:3347127-3347146 None:intergenic 35.0%
!! CTACTTTTATGTATGGAGGA+TGG - chr1.2:3346085-3346104 MS.gene24347:intron 35.0%
AAAGCTGCCCATAAAAAGTC+GGG - chr1.2:3347117-3347136 MS.gene24347:intron 40.0%
AACACCACACGAGTTACTTA+AGG + chr1.2:3346006-3346025 None:intergenic 40.0%
AAGCTCCACTGAGAATATCA+TGG + chr1.2:3345798-3345817 None:intergenic 40.0%
ACACGAGTTACTTAAGGATG+AGG + chr1.2:3346000-3346019 None:intergenic 40.0%
ACCGGATTTCTTTAACTCAG+AGG + chr1.2:3347052-3347071 None:intergenic 40.0%
AGCTTAGTCCATCATCAACA+TGG + chr1.2:3347426-3347445 None:intergenic 40.0%
ATTACGTGTTCGCATCAATG+AGG - chr1.2:3346837-3346856 MS.gene24347:intron 40.0%
CAAATACTTCGAAGAAGGCA+GGG - chr1.2:3347079-3347098 MS.gene24347:intron 40.0%
CACGAGTTACTTAAGGATGA+GGG + chr1.2:3345999-3346018 None:intergenic 40.0%
CATGCAAGTCACATTCTATG+CGG - chr1.2:3346736-3346755 MS.gene24347:intron 40.0%
GCTATCTCTTTCTCATCATG+TGG + chr1.2:3345838-3345857 None:intergenic 40.0%
TAGTATGCTTAGTGCAAGAC+AGG - chr1.2:3346903-3346922 MS.gene24347:intron 40.0%
TCAAATACTTCGAAGAAGGC+AGG - chr1.2:3347078-3347097 MS.gene24347:intron 40.0%
TCATCAACATGGTGTTTCCT+CGG + chr1.2:3347415-3347434 None:intergenic 40.0%
TCATCCTTAAGTAACTCGTG+TGG - chr1.2:3345999-3346018 MS.gene24347:intron 40.0%
TGTCTGTGGATCATACACTT+TGG - chr1.2:3347555-3347574 MS.gene24347:CDS 40.0%
! ACTTGCATGCAATCTAGTTC+TGG + chr1.2:3346725-3346744 None:intergenic 40.0%
! AGGAAACACCATGTTGATGA+TGG - chr1.2:3347415-3347434 MS.gene24347:CDS 40.0%
! CGAAGTATTTGAAGCTCTAC+CGG + chr1.2:3347070-3347089 None:intergenic 40.0%
! GGATGGTTGAATTTTGTTCG+TGG - chr1.2:3346760-3346779 MS.gene24347:intron 40.0%
! TGAGATGTAGAAGCTTGCTT+GGG + chr1.2:3346311-3346330 None:intergenic 40.0%
!! AGTTCTGGGAACAGAATTGA+CGG + chr1.2:3346710-3346729 None:intergenic 40.0%
!! CTTGCATGCAATCTAGTTCT+GGG + chr1.2:3346724-3346743 None:intergenic 40.0%
!! TTTATGGGCAGCTTTTGACT+TGG + chr1.2:3347112-3347131 None:intergenic 40.0%
!!! ACAAGCTAGTTTTCCAACCT+GGG + chr1.2:3346884-3346903 None:intergenic 40.0%
!!! TACAAGCTAGTTTTCCAACC+TGG + chr1.2:3346885-3346904 None:intergenic 40.0%
!!! TTATGGGCAGCTTTTGACTT+GGG + chr1.2:3347111-3347130 None:intergenic 40.0%
AAACAAAGACAGCTGTACCG+AGG - chr1.2:3347395-3347414 MS.gene24347:intron 45.0%
AATAGAAGTGGGAAGGCAGA+TGG - chr1.2:3345772-3345791 MS.gene24347:CDS 45.0%
AATCAGCTCAAAGTGCAGTG+CGG - chr1.2:3346972-3346991 MS.gene24347:intron 45.0%
ACCATCTACTGGGCAAATAG+AGG + chr1.2:3347153-3347172 None:intergenic 45.0%
CAGCCATCCTGAATAGAAGT+GGG - chr1.2:3345761-3345780 MS.gene24347:CDS 45.0%
CATCCTGAATAGAAGTGGGA+AGG - chr1.2:3345765-3345784 MS.gene24347:CDS 45.0%
CGTGGCAATAGCCTAAAGAT+TGG - chr1.2:3346778-3346797 MS.gene24347:intron 45.0%
CTTCCCACTTCTATTCAGGA+TGG + chr1.2:3345767-3345786 None:intergenic 45.0%
GAACAACTCACCAGAATACG+TGG + chr1.2:3345925-3345944 None:intergenic 45.0%
GAGTTACTTAAGGATGAGGG+CGG + chr1.2:3345996-3346015 None:intergenic 45.0%
GATGGCCATGATATTCTCAG+TGG - chr1.2:3345790-3345809 MS.gene24347:CDS 45.0%
TCCTCTATTTGCCCAGTAGA+TGG - chr1.2:3347149-3347168 MS.gene24347:intron 45.0%
TGCCCATAAAAAGTCGGGTA+TGG - chr1.2:3347122-3347141 MS.gene24347:intron 45.0%
TGTATGGAGGATGGTAAGCA+TGG - chr1.2:3346094-3346113 MS.gene24347:intron 45.0%
TGTTGAACGTCCACGTATTC+TGG - chr1.2:3345912-3345931 MS.gene24347:intron 45.0%
! GTGAGATGTAGAAGCTTGCT+TGG + chr1.2:3346312-3346331 None:intergenic 45.0%
!! AAAAGATGGGTTAGACTCCC+AGG - chr1.2:3346864-3346883 MS.gene24347:intron 45.0%
!!! TATGGGCAGCTTTTGACTTG+GGG + chr1.2:3347110-3347129 None:intergenic 45.0%
CAGTGTGAATGCCAAGCACA+GGG + chr1.2:3346562-3346581 None:intergenic 50.0%
CGTGTTCGCATCAATGAGGT+TGG - chr1.2:3346841-3346860 MS.gene24347:intron 50.0%
CTGCCTTCCCACTTCTATTC+AGG + chr1.2:3345771-3345790 None:intergenic 50.0%
GAATGCCAAGCACAGGGAAT+GGG + chr1.2:3346556-3346575 None:intergenic 50.0%
GCAAGTCACATTCTATGCGG+AGG - chr1.2:3346739-3346758 MS.gene24347:intron 50.0%
GCAGCCATCCTGAATAGAAG+TGG - chr1.2:3345760-3345779 MS.gene24347:CDS 50.0%
GTCACATTCTATGCGGAGGA+TGG - chr1.2:3346743-3346762 MS.gene24347:intron 50.0%
TACCTAGCGAAGATGGTGCT+TGG - chr1.2:3346267-3346286 MS.gene24347:CDS 50.0%
TCAGTGTGAATGCCAAGCAC+AGG + chr1.2:3346563-3346582 None:intergenic 50.0%
TGAATGCCAAGCACAGGGAA+TGG + chr1.2:3346557-3346576 None:intergenic 50.0%
TTCATCCCATTCCCTGTGCT+TGG - chr1.2:3346548-3346567 MS.gene24347:CDS 50.0%
!! TGATGATGGACTAAGCTCCC+AGG - chr1.2:3347429-3347448 MS.gene24347:CDS 50.0%
!!! ATGGGCAGCTTTTGACTTGG+GGG + chr1.2:3347109-3347128 None:intergenic 50.0%
TGCCAAGCACCATCTTCGCT+AGG + chr1.2:3346272-3346291 None:intergenic 55.0%
!! GATGGGTTAGACTCCCAGGT+TGG - chr1.2:3346868-3346887 MS.gene24347:intron 55.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 3345760 3347576 3345760 ID=MS.gene24347
chr1.2 mRNA 3345760 3347576 3345760 ID=MS.gene24347.t1;Parent=MS.gene24347
chr1.2 exon 3347403 3347576 3347403 ID=MS.gene24347.t1.exon1;Parent=MS.gene24347.t1
chr1.2 CDS 3347403 3347576 3347403 ID=cds.MS.gene24347.t1;Parent=MS.gene24347.t1
chr1.2 exon 3346198 3346714 3346198 ID=MS.gene24347.t1.exon2;Parent=MS.gene24347.t1
chr1.2 CDS 3346198 3346714 3346198 ID=cds.MS.gene24347.t1;Parent=MS.gene24347.t1
chr1.2 exon 3345760 3345929 3345760 ID=MS.gene24347.t1.exon3;Parent=MS.gene24347.t1
chr1.2 CDS 3345760 3345929 3345760 ID=cds.MS.gene24347.t1;Parent=MS.gene24347.t1
Gene Sequence

>MS.gene24347

GCAGCCATCCTGAATAGAAGTGGGAAGGCAGATGGCCATGATATTCTCAGTGGAGCTTCACTGTCTAAGTTATCACCACATGATGAGAAAGAGATAGCCCAATCATTTACCTCCTCTTTTCCATATTTTGTTAAAATAATGAAAACGTTCAATGTTGAACGTCCACGTATTCTGGTGAGTTGTTCCCTTTTGTGATTCTCAATTTACCTCCCAAATAATGTTGTTTTATCTCTCCGCCCTCATCCTTAAGTAACTCGTGTGGTGTTTCACTTGCTTGAGAAACTGATATTGTTGGATTATATTAATTTTTATCCAAACAATATTTCTACTTTTATGTATGGAGGATGGTAAGCATGGATTAAAGCATTTCAGATGCATAGATTACAAGTATAAGATGATCTCAATGAAAATTCCATCCATAATTCCATCCTAATTAATGAGTCAATCTTGGTAGATTTGAACTATTCTTGTATTTGCACTTCAATGCATGTTGGAGTGATATTTCAATACCTAGCGAAGATGGTGCTTGGCAAACTTCTAAACTTCTACCCAAGCAAGCTTCTACATCTCACTAAGTTCGACACCTTTTCCACTGCTATGACATAACACATTGACTTCTGTTCTATGCAATTACAATGCTGTATTTCTCCAAGAAGTACCAATTGTTATTGTTATCACAATCTCCTTCCCTTAAATGTTTTTATTCAACGGTATTGCAATTTTAACTTTCCTTCTCAAATATTTTTTGTTTTAAGTTTATTTGGGTGTATTATTTGTTATGTGAAGTTTTCATCCCATTCCCTGTGCTTGGCATTCACACTGAAGCTCTTCCTAATACCGATTTATAATGGACACAATGCAGAATATTCCATATGAATTTTCGAAGGATCATCTTCCAAACTGCAAGATAAAGATTATTCTTCATAATTTGAAGGGAGAACAGTGGACCGTCAATTCTGTTCCCAGAACTAGATTGCATGCAAGTCACATTCTATGCGGAGGATGGTTGAATTTTGTTCGTGGCAATAGCCTAAAGATTGGAGATGTCTGTATTTTCGAACTTATAGGTGAGTGTGAATTACGTGTTCGCATCAATGAGGTTGGAAAAGATGGGTTAGACTCCCAGGTTGGAAAACTAGCTTGTAGTATGCTTAGTGCAAGACAGGAAGTCGCTAGCCATAAGACTTCCAGATTTATGCCGAAGAAACATAAAATCAGCTCAAAGTGCAGTGCGGAAGTTGATCTATTAGATAAAAAGTTGTCAGAGATATGTCAAGAAGCTGCTTTATCCTCTGAGTTAAAGAAATCCGGTAGAGCTTCAAATACTTCGAAGAAGGCAGGGCTTTCCCCCAAGTCAAAAGCTGCCCATAAAAAGTCGGGTATGGTTTTTCCTCTATTTGCCCAGTAGATGGTAATTTTTATTGCAATGTAGATCTATATCTTAAGTTTCTGCAACAAATTCATATTCAGTATTTTATGTTCACAAGTAAAAAGAGAAGAATATAATTCAATTTTCGGACAATTACAATTGTGTTACTTTGATAGTGAAAGAAAGAACCCAAAGGATAAATGTTGAATACTTTCCTTAAAAAATTTCTACCTTCCAAATTATGACTTCAGTCCCATTTTAACTGTAAACAAAGACAGCTGTACCGAGGAAACACCATGTTGATGATGGACTAAGCTCCCAGGCTAATGATAGTTTGAAAATGTTGTTTGCACTCGACGAACAAAGAGTAGCTGAAGCTTTCACTTCCCCATTTCCATATTTTGTGAAAATCATGAAGAAGTTCAATGTCTGTGGATCATACACTTTG
Protein sequence

>MS.gene24347.t1

AAILNRSGKADGHDILSGASLSKLSPHDEKEIAQSFTSSFPYFVKIMKTFNVERPRILNIPYEFSKDHLPNCKIKIILHNLKGEQWTVNSVPRTRLHASHILCGGWLNFVRGNSLKIGDVCIFELIGECELRVRINEVGKDGLDSQVGKLACSMLSARQEVASHKTSRFMPKKHKISSKCSAEVDLLDKKLSEICQEAALSSELKKSGRASNTSKKAGLSPKSKAAHKKSAVPRKHHVDDGLSSQANDSLKMLFALDEQRVAEAFTSPFPYFVKIMKKFNVCGSYTL