Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24604.t1 | XP_013468188.1 | 98.8 | 563 | 7 | 0 | 1 | 563 | 1 | 563 | 0.00E+00 | 1095.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24604.t1 | Q9LYW0 | 59.0 | 593 | 198 | 11 | 1 | 562 | 1 | 579 | 1.2e-193 | 677.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24604.t1 | A0A072VVV3 | 98.8 | 563 | 7 | 0 | 1 | 563 | 1 | 563 | 0.0e+00 | 1095.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene91505 | MS.gene24604 | PPI |
MS.gene94631 | MS.gene24604 | PPI |
MS.gene24604 | MS.gene053563 | PPI |
MS.gene24604 | MS.gene02183 | PPI |
MS.gene24604 | MS.gene073115 | PPI |
MS.gene24604 | MS.gene068040 | PPI |
MS.gene24604 | MS.gene028462 | PPI |
MS.gene24604 | MS.gene35341 | PPI |
MS.gene24604 | MS.gene90204 | PPI |
MS.gene24604 | MS.gene002224 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24604.t1 | MTR_1g064360 | 98.757 | 563 | 7 | 0 | 1 | 563 | 1 | 563 | 0.0 | 1145 |
MS.gene24604.t1 | MTR_2g018750 | 71.138 | 589 | 135 | 7 | 1 | 562 | 1 | 581 | 0.0 | 837 |
MS.gene24604.t1 | MTR_1g094850 | 52.931 | 580 | 237 | 7 | 1 | 553 | 1 | 571 | 0.0 | 612 |
MS.gene24604.t1 | MTR_2g048390 | 51.209 | 455 | 192 | 6 | 1 | 428 | 1 | 452 | 3.14e-159 | 462 |
MS.gene24604.t1 | MTR_8g078900 | 38.907 | 622 | 278 | 14 | 17 | 550 | 11 | 618 | 9.12e-138 | 415 |
MS.gene24604.t1 | MTR_2g084595 | 36.503 | 589 | 325 | 9 | 13 | 560 | 10 | 590 | 2.11e-130 | 395 |
MS.gene24604.t1 | MTR_8g078900 | 38.602 | 601 | 267 | 14 | 38 | 550 | 2 | 588 | 1.60e-128 | 390 |
MS.gene24604.t1 | MTR_8g078900 | 39.890 | 544 | 249 | 11 | 74 | 550 | 46 | 578 | 6.31e-125 | 380 |
MS.gene24604.t1 | MTR_2g009340 | 37.803 | 537 | 275 | 9 | 5 | 486 | 23 | 555 | 4.76e-120 | 370 |
MS.gene24604.t1 | MTR_4g093850 | 37.218 | 532 | 278 | 8 | 5 | 486 | 23 | 548 | 2.79e-117 | 362 |
MS.gene24604.t1 | MTR_5g032780 | 38.815 | 523 | 280 | 7 | 1 | 483 | 1 | 523 | 1.85e-113 | 351 |
MS.gene24604.t1 | MTR_7g073980 | 37.708 | 541 | 295 | 13 | 26 | 547 | 33 | 550 | 4.20e-110 | 343 |
MS.gene24604.t1 | MTR_4g022330 | 37.058 | 537 | 301 | 10 | 28 | 545 | 36 | 554 | 7.41e-110 | 341 |
MS.gene24604.t1 | MTR_8g090220 | 33.679 | 579 | 321 | 13 | 15 | 552 | 41 | 597 | 1.77e-106 | 333 |
MS.gene24604.t1 | MTR_1g106430 | 35.501 | 569 | 312 | 14 | 1 | 537 | 1 | 546 | 2.20e-106 | 332 |
MS.gene24604.t1 | MTR_5g016060 | 34.615 | 546 | 306 | 10 | 20 | 543 | 34 | 550 | 1.00e-105 | 331 |
MS.gene24604.t1 | MTR_3g062540 | 38.495 | 465 | 265 | 8 | 20 | 482 | 18 | 463 | 5.56e-105 | 327 |
MS.gene24604.t1 | MTR_5g015790 | 39.139 | 511 | 251 | 11 | 1 | 479 | 1 | 483 | 1.14e-104 | 328 |
MS.gene24604.t1 | MTR_8g090220 | 36.531 | 490 | 269 | 10 | 15 | 480 | 41 | 512 | 5.97e-104 | 323 |
MS.gene24604.t1 | MTR_1g088885 | 35.420 | 559 | 310 | 11 | 15 | 545 | 26 | 561 | 5.29e-103 | 323 |
MS.gene24604.t1 | MTR_1g014070 | 38.264 | 507 | 264 | 12 | 1 | 478 | 1 | 487 | 5.71e-103 | 323 |
MS.gene24604.t1 | MTR_8g078900 | 39.309 | 463 | 220 | 10 | 17 | 428 | 11 | 463 | 9.92e-101 | 313 |
MS.gene24604.t1 | MTR_7g108290 | 35.472 | 561 | 310 | 13 | 15 | 545 | 26 | 564 | 2.13e-98 | 313 |
MS.gene24604.t1 | MTR_2g084595 | 36.569 | 443 | 247 | 7 | 13 | 428 | 10 | 445 | 2.23e-96 | 301 |
MS.gene24604.t1 | MTR_3g062540 | 38.041 | 439 | 251 | 8 | 46 | 482 | 2 | 421 | 1.21e-95 | 301 |
MS.gene24604.t1 | MTR_5g075640 | 35.699 | 479 | 285 | 8 | 15 | 486 | 15 | 477 | 3.03e-94 | 300 |
MS.gene24604.t1 | MTR_4g095430 | 34.433 | 485 | 277 | 7 | 20 | 484 | 7 | 470 | 3.31e-93 | 297 |
MS.gene24604.t1 | MTR_8g069330 | 35.912 | 543 | 292 | 12 | 1 | 513 | 1 | 517 | 7.69e-93 | 296 |
MS.gene24604.t1 | MTR_4g093850 | 34.810 | 474 | 253 | 8 | 5 | 428 | 23 | 490 | 7.25e-89 | 284 |
MS.gene24604.t1 | MTR_8g078900 | 40.103 | 389 | 188 | 7 | 74 | 428 | 46 | 423 | 5.38e-88 | 278 |
MS.gene24604.t1 | MTR_4g134210 | 33.065 | 496 | 290 | 10 | 1 | 477 | 1 | 473 | 8.86e-87 | 281 |
MS.gene24604.t1 | MTR_5g075640 | 35.491 | 448 | 267 | 7 | 46 | 486 | 2 | 434 | 3.92e-85 | 275 |
MS.gene24604.t1 | MTR_1g082690 | 30.833 | 480 | 296 | 9 | 10 | 486 | 42 | 488 | 1.59e-80 | 263 |
MS.gene24604.t1 | MTR_5g016060 | 33.117 | 462 | 260 | 9 | 104 | 543 | 2 | 436 | 2.87e-76 | 251 |
MS.gene24604.t1 | MTR_2g027410 | 31.365 | 491 | 295 | 9 | 1 | 477 | 1 | 463 | 3.82e-75 | 249 |
MS.gene24604.t1 | MTR_4g011530 | 31.937 | 382 | 228 | 6 | 186 | 557 | 42 | 401 | 9.40e-62 | 210 |
MS.gene24604.t1 | MTR_2g102730 | 32.884 | 371 | 202 | 7 | 190 | 545 | 24 | 362 | 1.07e-59 | 204 |
MS.gene24604.t1 | MTR_2g027410 | 30.935 | 417 | 248 | 8 | 75 | 477 | 1 | 391 | 2.61e-58 | 202 |
MS.gene24604.t1 | MTR_4g045767 | 28.164 | 561 | 311 | 18 | 35 | 547 | 14 | 530 | 1.13e-56 | 199 |
MS.gene24604.t1 | MTR_1g035720 | 25.394 | 571 | 319 | 14 | 29 | 544 | 6 | 524 | 1.53e-46 | 171 |
MS.gene24604.t1 | MTR_4g074190 | 27.745 | 501 | 284 | 13 | 27 | 483 | 4 | 470 | 3.32e-45 | 168 |
MS.gene24604.t1 | MTR_4g074190 | 28.509 | 456 | 250 | 11 | 70 | 483 | 3 | 424 | 4.37e-44 | 164 |
MS.gene24604.t1 | MTR_4g074190 | 26.339 | 448 | 252 | 13 | 27 | 430 | 4 | 417 | 7.95e-34 | 134 |
MS.gene24604.t1 | MTR_2g048375 | 51.145 | 131 | 51 | 3 | 445 | 562 | 1 | 131 | 7.13e-32 | 121 |
MS.gene24604.t1 | MTR_1g105870 | 34.973 | 183 | 112 | 2 | 34 | 209 | 39 | 221 | 1.55e-30 | 120 |
MS.gene24604.t1 | MTR_2g010890 | 25.780 | 481 | 273 | 15 | 94 | 543 | 1 | 428 | 6.25e-24 | 105 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene24604.t1 | AT5G03250 | 59.022 | 593 | 198 | 11 | 1 | 562 | 1 | 579 | 0.0 | 707 |
MS.gene24604.t1 | AT5G13600 | 52.462 | 589 | 236 | 10 | 1 | 563 | 1 | 571 | 0.0 | 587 |
MS.gene24604.t1 | AT1G30440 | 49.251 | 601 | 245 | 9 | 1 | 549 | 1 | 593 | 0.0 | 576 |
MS.gene24604.t1 | AT5G03250 | 57.380 | 481 | 160 | 11 | 113 | 562 | 1 | 467 | 0.0 | 543 |
MS.gene24604.t1 | AT3G44820 | 38.345 | 592 | 313 | 10 | 13 | 556 | 10 | 597 | 3.12e-137 | 413 |
MS.gene24604.t1 | AT5G66560 | 37.323 | 635 | 271 | 11 | 17 | 545 | 10 | 623 | 9.90e-128 | 389 |
MS.gene24604.t1 | AT5G66560 | 36.808 | 614 | 261 | 11 | 38 | 545 | 2 | 594 | 1.30e-118 | 365 |
MS.gene24604.t1 | AT3G50840 | 38.919 | 555 | 286 | 10 | 23 | 552 | 13 | 539 | 1.69e-117 | 359 |
MS.gene24604.t1 | AT5G66560 | 39.444 | 540 | 242 | 10 | 70 | 545 | 66 | 584 | 3.88e-117 | 360 |
MS.gene24604.t1 | AT5G48800 | 36.991 | 565 | 286 | 11 | 28 | 555 | 43 | 574 | 8.48e-110 | 341 |
MS.gene24604.t1 | AT5G67385 | 36.025 | 483 | 273 | 6 | 20 | 486 | 19 | 481 | 3.84e-106 | 331 |
MS.gene24604.t1 | AT3G50840 | 38.403 | 526 | 270 | 10 | 54 | 552 | 5 | 503 | 4.82e-106 | 329 |
MS.gene24604.t1 | AT3G50840 | 38.403 | 526 | 270 | 10 | 54 | 552 | 5 | 503 | 4.82e-106 | 329 |
MS.gene24604.t1 | AT3G08570 | 35.490 | 541 | 309 | 10 | 26 | 547 | 34 | 553 | 1.17e-104 | 328 |
MS.gene24604.t1 | AT2G47860 | 36.000 | 550 | 303 | 12 | 23 | 545 | 34 | 561 | 1.25e-104 | 328 |
MS.gene24604.t1 | AT1G03010 | 36.462 | 554 | 304 | 12 | 24 | 545 | 7 | 544 | 5.72e-104 | 326 |
MS.gene24604.t1 | AT1G03010 | 36.234 | 563 | 310 | 13 | 15 | 545 | 26 | 571 | 9.26e-104 | 326 |
MS.gene24604.t1 | AT1G03010 | 36.219 | 566 | 308 | 14 | 16 | 545 | 22 | 570 | 1.50e-103 | 325 |
MS.gene24604.t1 | AT1G67900 | 37.452 | 518 | 276 | 9 | 1 | 479 | 1 | 509 | 2.14e-100 | 317 |
MS.gene24604.t1 | AT1G67900 | 37.452 | 518 | 276 | 9 | 1 | 479 | 1 | 509 | 2.14e-100 | 317 |
MS.gene24604.t1 | AT1G67900 | 37.452 | 518 | 276 | 9 | 1 | 479 | 1 | 509 | 2.14e-100 | 317 |
MS.gene24604.t1 | AT1G67900 | 37.452 | 518 | 276 | 9 | 1 | 479 | 1 | 509 | 2.14e-100 | 317 |
MS.gene24604.t1 | AT1G67900 | 37.452 | 518 | 276 | 9 | 1 | 479 | 1 | 509 | 2.14e-100 | 317 |
MS.gene24604.t1 | AT1G67900 | 37.452 | 518 | 276 | 9 | 1 | 479 | 1 | 509 | 2.14e-100 | 317 |
MS.gene24604.t1 | AT2G30520 | 36.364 | 484 | 289 | 8 | 4 | 485 | 9 | 475 | 6.05e-100 | 315 |
MS.gene24604.t1 | AT3G08660 | 34.124 | 548 | 297 | 15 | 26 | 549 | 34 | 541 | 1.34e-99 | 313 |
MS.gene24604.t1 | AT2G47860 | 34.555 | 573 | 303 | 13 | 23 | 545 | 34 | 584 | 1.59e-99 | 316 |
MS.gene24604.t1 | AT4G37590 | 37.187 | 519 | 246 | 14 | 1 | 486 | 1 | 472 | 2.56e-98 | 310 |
MS.gene24604.t1 | AT2G14820 | 36.576 | 514 | 279 | 13 | 1 | 486 | 1 | 495 | 2.18e-96 | 307 |
MS.gene24604.t1 | AT2G14820 | 36.576 | 514 | 279 | 13 | 1 | 486 | 1 | 495 | 2.18e-96 | 307 |
MS.gene24604.t1 | AT5G10250 | 32.513 | 569 | 322 | 13 | 13 | 549 | 37 | 575 | 3.24e-96 | 306 |
MS.gene24604.t1 | AT4G31820 | 35.742 | 512 | 260 | 12 | 1 | 483 | 1 | 472 | 6.85e-94 | 298 |
MS.gene24604.t1 | AT5G67440 | 36.346 | 509 | 273 | 13 | 1 | 485 | 1 | 482 | 5.09e-93 | 296 |
MS.gene24604.t1 | AT5G67440 | 36.346 | 509 | 273 | 13 | 1 | 485 | 1 | 482 | 5.09e-93 | 296 |
MS.gene24604.t1 | AT5G67385 | 34.649 | 456 | 262 | 6 | 47 | 486 | 1 | 436 | 2.72e-92 | 294 |
MS.gene24604.t1 | AT5G67385 | 34.649 | 456 | 262 | 6 | 47 | 486 | 1 | 436 | 2.72e-92 | 294 |
MS.gene24604.t1 | AT5G67385 | 34.649 | 456 | 262 | 6 | 47 | 486 | 1 | 436 | 2.72e-92 | 294 |
MS.gene24604.t1 | AT5G67385 | 34.649 | 456 | 262 | 6 | 47 | 486 | 1 | 436 | 2.72e-92 | 294 |
MS.gene24604.t1 | AT5G10250 | 32.379 | 559 | 321 | 13 | 13 | 549 | 37 | 560 | 1.64e-91 | 293 |
MS.gene24604.t1 | AT2G23050 | 35.827 | 508 | 255 | 12 | 1 | 487 | 1 | 458 | 2.00e-91 | 289 |
MS.gene24604.t1 | AT5G66560 | 36.253 | 491 | 213 | 9 | 17 | 428 | 10 | 479 | 1.85e-90 | 286 |
MS.gene24604.t1 | AT2G30520 | 36.199 | 442 | 264 | 7 | 46 | 485 | 2 | 427 | 1.57e-89 | 286 |
MS.gene24604.t1 | AT2G30520 | 36.199 | 442 | 264 | 7 | 46 | 485 | 2 | 427 | 1.57e-89 | 286 |
MS.gene24604.t1 | AT3G08660 | 33.858 | 508 | 275 | 14 | 66 | 549 | 11 | 481 | 3.72e-89 | 285 |
MS.gene24604.t1 | AT3G26490 | 33.942 | 548 | 289 | 12 | 1 | 500 | 1 | 523 | 4.48e-88 | 284 |
MS.gene24604.t1 | AT3G26490 | 33.942 | 548 | 289 | 12 | 1 | 500 | 1 | 523 | 4.48e-88 | 284 |
MS.gene24604.t1 | AT3G26490 | 33.942 | 548 | 289 | 12 | 1 | 500 | 1 | 523 | 4.48e-88 | 284 |
MS.gene24604.t1 | AT5G67440 | 35.684 | 468 | 251 | 12 | 41 | 485 | 5 | 445 | 3.08e-82 | 267 |
MS.gene24604.t1 | AT5G47800 | 30.629 | 493 | 307 | 9 | 1 | 477 | 1 | 474 | 1.28e-78 | 258 |
MS.gene24604.t1 | AT5G47800 | 30.629 | 493 | 307 | 9 | 1 | 477 | 1 | 474 | 1.28e-78 | 258 |
MS.gene24604.t1 | AT5G47800 | 30.629 | 493 | 307 | 9 | 1 | 477 | 1 | 474 | 1.28e-78 | 258 |
MS.gene24604.t1 | AT3G49970 | 34.186 | 430 | 237 | 9 | 38 | 463 | 6 | 393 | 9.63e-78 | 254 |
MS.gene24604.t1 | AT3G49970 | 34.186 | 430 | 237 | 9 | 38 | 463 | 6 | 393 | 9.63e-78 | 254 |
MS.gene24604.t1 | AT5G47800 | 30.629 | 493 | 307 | 9 | 1 | 477 | 114 | 587 | 2.74e-77 | 257 |
MS.gene24604.t1 | AT2G47860 | 35.431 | 429 | 235 | 10 | 23 | 428 | 34 | 443 | 2.65e-76 | 249 |
MS.gene24604.t1 | AT4G31820 | 34.793 | 434 | 217 | 10 | 74 | 479 | 20 | 415 | 6.28e-75 | 247 |
MS.gene24604.t1 | AT2G47860 | 33.913 | 460 | 260 | 11 | 113 | 545 | 1 | 443 | 1.13e-72 | 241 |
MS.gene24604.t1 | AT2G47860 | 33.913 | 460 | 260 | 11 | 113 | 545 | 1 | 443 | 1.13e-72 | 241 |
MS.gene24604.t1 | AT3G08660 | 33.489 | 427 | 233 | 12 | 24 | 435 | 32 | 422 | 2.90e-71 | 235 |
MS.gene24604.t1 | AT2G47860 | 33.628 | 452 | 235 | 11 | 23 | 428 | 34 | 466 | 3.16e-71 | 236 |
MS.gene24604.t1 | AT3G26490 | 32.265 | 499 | 262 | 13 | 1 | 443 | 1 | 479 | 1.73e-65 | 222 |
MS.gene24604.t1 | AT1G52770 | 33.247 | 388 | 224 | 7 | 190 | 561 | 28 | 396 | 5.00e-64 | 216 |
MS.gene24604.t1 | AT3G15570 | 32.908 | 392 | 220 | 8 | 190 | 561 | 29 | 397 | 8.64e-59 | 202 |
MS.gene24604.t1 | AT5G64330 | 43.154 | 241 | 124 | 1 | 259 | 486 | 313 | 553 | 1.22e-56 | 200 |
MS.gene24604.t1 | AT5G64330 | 36.638 | 232 | 107 | 4 | 39 | 232 | 6 | 235 | 1.02e-39 | 153 |
MS.gene24604.t1 | AT2G23050 | 33.418 | 392 | 194 | 9 | 113 | 487 | 1 | 342 | 1.56e-56 | 194 |
MS.gene24604.t1 | AT5G64330 | 43.154 | 241 | 124 | 1 | 259 | 486 | 372 | 612 | 3.70e-56 | 200 |
MS.gene24604.t1 | AT5G64330 | 37.121 | 264 | 126 | 4 | 7 | 232 | 33 | 294 | 4.44e-50 | 183 |
MS.gene24604.t1 | AT5G64330 | 43.154 | 241 | 124 | 1 | 259 | 486 | 372 | 612 | 3.75e-56 | 201 |
MS.gene24604.t1 | AT5G64330 | 37.121 | 264 | 126 | 4 | 7 | 232 | 33 | 294 | 1.11e-49 | 183 |
MS.gene24604.t1 | AT3G03510 | 30.244 | 410 | 230 | 8 | 82 | 485 | 8 | 367 | 2.34e-51 | 182 |
MS.gene24604.t1 | AT5G48130 | 27.961 | 515 | 289 | 14 | 19 | 505 | 32 | 492 | 1.27e-49 | 181 |
MS.gene24604.t1 | AT3G19850 | 25.956 | 497 | 289 | 11 | 26 | 478 | 3 | 464 | 4.59e-49 | 179 |
MS.gene24604.t1 | AT5G17580 | 26.804 | 485 | 295 | 9 | 23 | 485 | 2 | 448 | 1.19e-46 | 172 |
MS.gene24604.t1 | AT5G17580 | 26.804 | 485 | 295 | 9 | 23 | 485 | 17 | 463 | 1.29e-46 | 172 |
MS.gene24604.t1 | AT3G22104 | 27.813 | 471 | 258 | 13 | 22 | 464 | 4 | 420 | 1.61e-46 | 171 |
MS.gene24604.t1 | AT1G50280 | 26.819 | 481 | 277 | 11 | 35 | 473 | 13 | 460 | 4.32e-43 | 161 |
MS.gene24604.t1 | AT1G50280 | 27.088 | 443 | 251 | 10 | 70 | 473 | 18 | 427 | 2.10e-41 | 156 |
MS.gene24604.t1 | AT3G22104 | 26.904 | 394 | 211 | 10 | 98 | 464 | 2 | 345 | 4.04e-31 | 126 |
MS.gene24604.t1 | AT3G22104 | 26.904 | 394 | 211 | 10 | 98 | 464 | 2 | 345 | 4.04e-31 | 126 |
MS.gene24604.t1 | AT3G22104 | 26.904 | 394 | 211 | 10 | 98 | 464 | 2 | 345 | 4.04e-31 | 126 |
MS.gene24604.t1 | AT3G49900 | 34.615 | 156 | 89 | 6 | 18 | 167 | 57 | 205 | 1.39e-11 | 67.4 |
MS.gene24604.t1 | AT3G49900 | 34.615 | 156 | 89 | 6 | 18 | 167 | 57 | 205 | 1.49e-11 | 67.4 |
Find 85 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATCATGCATAGAAAATT+TGG | 0.155376 | 1.2:-49184134 | MS.gene24604:CDS |
ACTTCACAAAGTGCAAATTT+TGG | 0.206287 | 1.2:-49182923 | MS.gene24604:CDS |
TCAACTGAATATCCCATATT+TGG | 0.208718 | 1.2:+49184058 | None:intergenic |
CTTAGACTAACCACATTTAA+TGG | 0.227040 | 1.2:+49184730 | None:intergenic |
TTTCTTCTAAAGAAAATTCT+TGG | 0.248825 | 1.2:+49182749 | None:intergenic |
AGGAAATCAAAGGGCATTAT+TGG | 0.252444 | 1.2:-49184251 | MS.gene24604:CDS |
CATCATTAATATATTATCTT+AGG | 0.256645 | 1.2:-49184360 | MS.gene24604:CDS |
TTACAAATGAATGAAAATTA+TGG | 0.278342 | 1.2:-49184691 | MS.gene24604:CDS |
TGCTACAGGGTTTGTACAAC+TGG | 0.331219 | 1.2:-49185253 | MS.gene24604:intron |
GGAGTAGTTGATGTTGTTCC+AGG | 0.353890 | 1.2:+49183974 | None:intergenic |
ACTACTCCATTATGTATAAC+TGG | 0.355235 | 1.2:-49183959 | MS.gene24604:CDS |
GACAATTGTGGCTAATTTGT+TGG | 0.360833 | 1.2:-49183894 | MS.gene24604:CDS |
CCTTCTCCAGTTATACATAA+TGG | 0.382336 | 1.2:+49183953 | None:intergenic |
GCATAGAAAATTTGGAGAAA+AGG | 0.389239 | 1.2:-49184126 | MS.gene24604:CDS |
ATCCTCGGAACATGCCTTGA+TGG | 0.392643 | 1.2:+49184519 | None:intergenic |
AATGATGCAGCAACATTCTC+AGG | 0.395320 | 1.2:+49184376 | None:intergenic |
CATAGAAAATTTGGAGAAAA+GGG | 0.402624 | 1.2:-49184125 | MS.gene24604:CDS |
TGCTATTGATGTATACCTTA+AGG | 0.402665 | 1.2:-49183759 | MS.gene24604:intron |
GCATTATTGGAAGAAATTGT+AGG | 0.405381 | 1.2:-49184238 | MS.gene24604:CDS |
ACACCAAGTAGAAGTTTAGA+AGG | 0.417642 | 1.2:-49184271 | MS.gene24604:CDS |
TCCAATGGCCTAGCATAATC+AGG | 0.417891 | 1.2:+49183797 | None:intergenic |
TTCGTACATCAATTTCTAGT+TGG | 0.419163 | 1.2:-49182970 | MS.gene24604:CDS |
TTTGGATTCTCAAGGAGTAA+TGG | 0.443429 | 1.2:-49182905 | MS.gene24604:CDS |
TAAATGGCATTGTTGAAGCT+TGG | 0.453776 | 1.2:-49185458 | MS.gene24604:CDS |
ATTGTATCAATTGAATCAAA+AGG | 0.455614 | 1.2:-49184406 | MS.gene24604:CDS |
TACCTTCTAAATATCTCCTT+AGG | 0.462829 | 1.2:-49184189 | MS.gene24604:CDS |
GAAAATTTGGAGAAAAGGGT+TGG | 0.465484 | 1.2:-49184121 | MS.gene24604:CDS |
TTTCCATTGCTTTCTAGAAG+TGG | 0.467653 | 1.2:-49184892 | MS.gene24604:CDS |
AAGCTGACTAAAACTAAGAA+AGG | 0.469100 | 1.2:-49182785 | MS.gene24604:CDS |
GGAACATGCCTTGATGGTTA+AGG | 0.470939 | 1.2:+49184525 | None:intergenic |
TGCATCAACTCCACCAATCA+AGG | 0.474680 | 1.2:+49183928 | None:intergenic |
CATTATTGGAAGAAATTGTA+GGG | 0.475629 | 1.2:-49184237 | MS.gene24604:CDS |
CTTTCTGAATCTATTAGCCA+TGG | 0.477232 | 1.2:+49183118 | None:intergenic |
TGACTAAAACTAAGAAAGGT+TGG | 0.477655 | 1.2:-49182781 | MS.gene24604:CDS |
AACCTAAGGAGATATTTAGA+AGG | 0.481256 | 1.2:+49184187 | None:intergenic |
TCCTGATTATGCTAGGCCAT+TGG | 0.481839 | 1.2:-49183798 | MS.gene24604:CDS |
GCTGACTCTACAAATGAAGA+TGG | 0.482347 | 1.2:-49184850 | MS.gene24604:CDS |
CATTGATTCCTTAACCATCA+AGG | 0.484557 | 1.2:-49184533 | MS.gene24604:CDS |
AAATTAGCCACAATTGTCAT+AGG | 0.488288 | 1.2:+49183899 | None:intergenic |
TTCTCAAGGAGTAATGGAAA+TGG | 0.489689 | 1.2:-49182899 | MS.gene24604:CDS |
GCAGCAAGAGATTGAAACTT+AGG | 0.490656 | 1.2:+49183827 | None:intergenic |
CACAAGCTTCAAGTGATGAT+TGG | 0.491149 | 1.2:-49184477 | MS.gene24604:CDS |
TTTCCTTCTAAACTTCTACT+TGG | 0.493969 | 1.2:+49184268 | None:intergenic |
CTTCAATTCCTGATTATGCT+AGG | 0.500244 | 1.2:-49183805 | MS.gene24604:CDS |
ACTGGAGAAGGATCCTTGAT+TGG | 0.500424 | 1.2:-49183941 | MS.gene24604:CDS |
CATGGCTAATAGATTCAGAA+AGG | 0.514633 | 1.2:-49183117 | MS.gene24604:CDS |
GAAGTTTAGAAGGAAATCAA+AGG | 0.518783 | 1.2:-49184261 | MS.gene24604:CDS |
TTGCACTTTGTGAAGTCTCA+AGG | 0.519032 | 1.2:+49182930 | None:intergenic |
TATGCTAGGCCATTGGATGA+TGG | 0.527344 | 1.2:-49183791 | MS.gene24604:CDS |
TGAATGAAAATTATGGTGAA+AGG | 0.536604 | 1.2:-49184684 | MS.gene24604:CDS |
GTGATGTTACCATTGCAGTA+GGG | 0.537044 | 1.2:-49185222 | MS.gene24604:CDS |
CTTGATTGTCTATTCATCAA+AGG | 0.542005 | 1.2:+49184328 | None:intergenic |
TAGCTGTTCTTAGCAACCTA+AGG | 0.543253 | 1.2:+49184173 | None:intergenic |
ACAAGGTGGTGAAAACTTGA+GGG | 0.545706 | 1.2:-49182861 | MS.gene24604:CDS |
GGAGAAGGATCCTTGATTGG+TGG | 0.545909 | 1.2:-49183938 | MS.gene24604:CDS |
TTACAACTTCATGATGTACC+TGG | 0.555478 | 1.2:-49184814 | MS.gene24604:CDS |
GTCAATTGTAGGCACATCCA+TGG | 0.560445 | 1.2:-49183135 | MS.gene24604:intron |
CCATTATGTATAACTGGAGA+AGG | 0.561165 | 1.2:-49183953 | MS.gene24604:CDS |
TCTGATATATTTCGTCGTGA+TGG | 0.561374 | 1.2:-49185428 | MS.gene24604:CDS |
CACAAGGTGGTGAAAACTTG+AGG | 0.568143 | 1.2:-49182862 | MS.gene24604:CDS |
AGTGATGTTACCATTGCAGT+AGG | 0.569613 | 1.2:-49185223 | MS.gene24604:CDS |
TGATGTTACCATTGCAGTAG+GGG | 0.570086 | 1.2:-49185221 | MS.gene24604:CDS |
GACAAAACTAGTGTTAGTCA+AGG | 0.571383 | 1.2:-49184298 | MS.gene24604:CDS |
TGATGTTTCCCCTACTGCAA+TGG | 0.578219 | 1.2:+49185213 | None:intergenic |
ATGGCTAATAGATTCAGAAA+GGG | 0.578790 | 1.2:-49183116 | MS.gene24604:CDS |
GGATGCATATCTTGCTGAGG+TGG | 0.586152 | 1.2:-49183873 | MS.gene24604:CDS |
AAGCTTCAAGTGATGATTGG+TGG | 0.586288 | 1.2:-49184474 | MS.gene24604:CDS |
AAGTTTAGAAGGAAATCAAA+GGG | 0.591610 | 1.2:-49184260 | MS.gene24604:CDS |
AACCATCAAGGCATGTTCCG+AGG | 0.595842 | 1.2:-49184521 | MS.gene24604:CDS |
AATCCACTTCTAGAAAGCAA+TGG | 0.597726 | 1.2:+49184889 | None:intergenic |
GTTGGATGCATATCTTGCTG+AGG | 0.610750 | 1.2:-49183876 | MS.gene24604:CDS |
ACCACTGAGAGTAATAGTGC+AGG | 0.612486 | 1.2:-49183017 | MS.gene24604:CDS |
TGATATAAACCATCATCCAA+TGG | 0.612736 | 1.2:+49183782 | None:intergenic |
GCTTGATGAAGTTGAACTTG+TGG | 0.618217 | 1.2:-49184092 | MS.gene24604:CDS |
ACCTGCACTATTACTCTCAG+TGG | 0.620285 | 1.2:+49183016 | None:intergenic |
TTTATGTCAATGTATCAACC+TGG | 0.620633 | 1.2:-49183992 | MS.gene24604:CDS |
AGAAATCACACCATTAAATG+TGG | 0.630366 | 1.2:-49184740 | MS.gene24604:CDS |
ACAAAACTAGTGTTAGTCAA+GGG | 0.633780 | 1.2:-49184297 | MS.gene24604:CDS |
GAGTAATGGAAATGGTCAAG+TGG | 0.635636 | 1.2:-49182891 | MS.gene24604:CDS |
CAACTTCATGATGTACCTGG+TGG | 0.640051 | 1.2:-49184811 | MS.gene24604:CDS |
TTCGTCGTGATGGCCACACA+TGG | 0.641113 | 1.2:-49185418 | MS.gene24604:intron |
GGTCAAGTGGACCCTACACA+AGG | 0.652910 | 1.2:-49182878 | MS.gene24604:CDS |
TCGTGTATCAGAGCTAGAGA+AGG | 0.660514 | 1.2:-49182837 | MS.gene24604:CDS |
ATTGACACCTATGACAATTG+TGG | 0.686575 | 1.2:-49183906 | MS.gene24604:CDS |
CAAGTGGACCCTACACAAGG+TGG | 0.706968 | 1.2:-49182875 | MS.gene24604:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CATCATTAATATATTATCTT+AGG | - | chr1.2:49183834-49183853 | MS.gene24604:CDS | 15.0% |
!! | TTACAAATGAATGAAAATTA+TGG | - | chr1.2:49183503-49183522 | MS.gene24604:intron | 15.0% |
!!! | ACAATAAGTCTTTTATATAA+TGG | + | chr1.2:49183773-49183792 | None:intergenic | 15.0% |
!!! | CAAATAGTTTTTCTAATTAA+TGG | - | chr1.2:49182885-49182904 | MS.gene24604:CDS | 15.0% |
!! | ATTCATTTCGACTAAATATT+TGG | + | chr1.2:49184782-49184801 | None:intergenic | 20.0% |
!! | ATTGTATCAATTGAATCAAA+AGG | - | chr1.2:49183788-49183807 | MS.gene24604:CDS | 20.0% |
!! | TCAAAATTACATAAAGATCA+TGG | + | chr1.2:49183268-49183287 | None:intergenic | 20.0% |
!! | TTAGAAAAAATTGCAACAAA+CGG | + | chr1.2:49183113-49183132 | None:intergenic | 20.0% |
!!! | ACATGGTAAGAATATTTTTT+AGG | - | chr1.2:49182793-49182812 | MS.gene24604:CDS | 20.0% |
!!! | AGAAATTTTATGTCAATTGT+AGG | - | chr1.2:49185048-49185067 | MS.gene24604:intron | 20.0% |
!!! | CAATAGTATTTCTAAATTGA+CGG | - | chr1.2:49184666-49184685 | MS.gene24604:CDS | 20.0% |
!!! | CATTAAAGTATTACAGTATA+TGG | - | chr1.2:49184586-49184605 | MS.gene24604:CDS | 20.0% |
!!! | CTGAATTTGAATTTTGAATT+AGG | - | chr1.2:49184470-49184489 | MS.gene24604:CDS | 20.0% |
!!! | GATATTTTGATTCCAAATAT+GGG | - | chr1.2:49184124-49184143 | MS.gene24604:CDS | 20.0% |
!!! | TTTCTTCTAAAGAAAATTCT+TGG | + | chr1.2:49185448-49185467 | None:intergenic | 20.0% |
! | AAAAATATTCTTACCATGTG+TGG | + | chr1.2:49182792-49182811 | None:intergenic | 25.0% |
! | AAGTTTAGAAGGAAATCAAA+GGG | - | chr1.2:49183934-49183953 | MS.gene24604:CDS | 25.0% |
! | ATGATAAGCAAACACAAAAT+AGG | - | chr1.2:49183201-49183220 | MS.gene24604:intron | 25.0% |
! | CATAGAAAATTTGGAGAAAA+GGG | - | chr1.2:49184069-49184088 | MS.gene24604:CDS | 25.0% |
! | CATTATTGGAAGAAATTGTA+GGG | - | chr1.2:49183957-49183976 | MS.gene24604:CDS | 25.0% |
! | GAAAAAAGTTACGTTCAAAT+AGG | - | chr1.2:49182857-49182876 | MS.gene24604:CDS | 25.0% |
! | TGAATGAAAATTATGGTGAA+AGG | - | chr1.2:49183510-49183529 | MS.gene24604:intron | 25.0% |
! | TTCATCATGCATAGAAAATT+TGG | - | chr1.2:49184060-49184079 | MS.gene24604:CDS | 25.0% |
! | TTCTCAAAAATCAGTTTCAA+TGG | - | chr1.2:49183149-49183168 | MS.gene24604:intron | 25.0% |
!! | ATCATAACAAAGTTTTGCTA+TGG | - | chr1.2:49183422-49183441 | MS.gene24604:intron | 25.0% |
!! | ATCATATTTTATCTTGCTAC+AGG | - | chr1.2:49182927-49182946 | MS.gene24604:CDS | 25.0% |
!! | TCATATTTTATCTTGCTACA+GGG | - | chr1.2:49182928-49182947 | MS.gene24604:CDS | 25.0% |
!!! | GGATATTTTGATTCCAAATA+TGG | - | chr1.2:49184123-49184142 | MS.gene24604:CDS | 25.0% |
!!! | GGTATGACACTTTTTTTATT+AGG | + | chr1.2:49183989-49184008 | None:intergenic | 25.0% |
!!! | TACTTTAGGGACTAAATTTT+AGG | - | chr1.2:49184697-49184716 | MS.gene24604:CDS | 25.0% |
AAATTAGCCACAATTGTCAT+AGG | + | chr1.2:49184298-49184317 | None:intergenic | 30.0% | |
AACCTAAGGAGATATTTAGA+AGG | + | chr1.2:49184010-49184029 | None:intergenic | 30.0% | |
AAGCTGACTAAAACTAAGAA+AGG | - | chr1.2:49185409-49185428 | MS.gene24604:intron | 30.0% | |
ACAAAACTAGTGTTAGTCAA+GGG | - | chr1.2:49183897-49183916 | MS.gene24604:CDS | 30.0% | |
ACTACTCCATTATGTATAAC+TGG | - | chr1.2:49184235-49184254 | MS.gene24604:CDS | 30.0% | |
AGAAATCACACCATTAAATG+TGG | - | chr1.2:49183454-49183473 | MS.gene24604:intron | 30.0% | |
ATGAAACACTCAAACCAATA+TGG | - | chr1.2:49184838-49184857 | MS.gene24604:CDS | 30.0% | |
ATGGCTAATAGATTCAGAAA+GGG | - | chr1.2:49185078-49185097 | MS.gene24604:intron | 30.0% | |
CTTAGACTAACCACATTTAA+TGG | + | chr1.2:49183467-49183486 | None:intergenic | 30.0% | |
CTTGATTGTCTATTCATCAA+AGG | + | chr1.2:49183869-49183888 | None:intergenic | 30.0% | |
GAAGTTTAGAAGGAAATCAA+AGG | - | chr1.2:49183933-49183952 | MS.gene24604:CDS | 30.0% | |
GCATAGAAAATTTGGAGAAA+AGG | - | chr1.2:49184068-49184087 | MS.gene24604:CDS | 30.0% | |
GCATTATTGGAAGAAATTGT+AGG | - | chr1.2:49183956-49183975 | MS.gene24604:CDS | 30.0% | |
TACCTTCTAAATATCTCCTT+AGG | - | chr1.2:49184005-49184024 | MS.gene24604:CDS | 30.0% | |
TCAACTGAATATCCCATATT+TGG | + | chr1.2:49184139-49184158 | None:intergenic | 30.0% | |
TGACTAAAACTAAGAAAGGT+TGG | - | chr1.2:49185413-49185432 | MS.gene24604:intron | 30.0% | |
TGATATAAACCATCATCCAA+TGG | + | chr1.2:49184415-49184434 | None:intergenic | 30.0% | |
TGCTATTGATGTATACCTTA+AGG | - | chr1.2:49184435-49184454 | MS.gene24604:CDS | 30.0% | |
TTTATGTCAATGTATCAACC+TGG | - | chr1.2:49184202-49184221 | MS.gene24604:CDS | 30.0% | |
TTTCCTTCTAAACTTCTACT+TGG | + | chr1.2:49183929-49183948 | None:intergenic | 30.0% | |
! | ACTTCACAAAGTGCAAATTT+TGG | - | chr1.2:49185271-49185290 | MS.gene24604:intron | 30.0% |
! | GACGGACTTTATATACTTTA+GGG | - | chr1.2:49184684-49184703 | MS.gene24604:CDS | 30.0% |
!! | TGACGGACTTTATATACTTT+AGG | - | chr1.2:49184683-49184702 | MS.gene24604:CDS | 30.0% |
!! | TTCGTACATCAATTTCTAGT+TGG | - | chr1.2:49185224-49185243 | MS.gene24604:CDS | 30.0% |
!!! | AACATCATTTTTTCTCCACA+AGG | - | chr1.2:49182997-49183016 | MS.gene24604:CDS | 30.0% |
ACACCAAGTAGAAGTTTAGA+AGG | - | chr1.2:49183923-49183942 | MS.gene24604:CDS | 35.0% | |
AGATGAGTACAAGTGAAATG+AGG | + | chr1.2:49185003-49185022 | None:intergenic | 35.0% | |
AGTACAAGTGAAATGAGGTT+AGG | + | chr1.2:49184998-49185017 | None:intergenic | 35.0% | |
ATGCACACACTATCTTCTTA+GGG | - | chr1.2:49183060-49183079 | MS.gene24604:CDS | 35.0% | |
ATTGACACCTATGACAATTG+TGG | - | chr1.2:49184288-49184307 | MS.gene24604:CDS | 35.0% | |
CATGGCTAATAGATTCAGAA+AGG | - | chr1.2:49185077-49185096 | MS.gene24604:intron | 35.0% | |
CCATTATGTATAACTGGAGA+AGG | - | chr1.2:49184241-49184260 | MS.gene24604:CDS | 35.0% | |
CCTTCTCCAGTTATACATAA+TGG | + | chr1.2:49184244-49184263 | None:intergenic | 35.0% | |
CTCGTGTTAGACATCAATAT+CGG | + | chr1.2:49184940-49184959 | None:intergenic | 35.0% | |
CTTCAATTCCTGATTATGCT+AGG | - | chr1.2:49184389-49184408 | MS.gene24604:CDS | 35.0% | |
CTTTCTGAATCTATTAGCCA+TGG | + | chr1.2:49185079-49185098 | None:intergenic | 35.0% | |
GAAAATTTGGAGAAAAGGGT+TGG | - | chr1.2:49184073-49184092 | MS.gene24604:CDS | 35.0% | |
GACAAAACTAGTGTTAGTCA+AGG | - | chr1.2:49183896-49183915 | MS.gene24604:CDS | 35.0% | |
TCTGATATATTTCGTCGTGA+TGG | - | chr1.2:49182766-49182785 | MS.gene24604:CDS | 35.0% | |
TTACAACTTCATGATGTACC+TGG | - | chr1.2:49183380-49183399 | MS.gene24604:intron | 35.0% | |
TTTGGATTCTCAAGGAGTAA+TGG | - | chr1.2:49185289-49185308 | MS.gene24604:intron | 35.0% | |
! | AATCCACTTCTAGAAAGCAA+TGG | + | chr1.2:49183308-49183327 | None:intergenic | 35.0% |
! | GACAATTGTGGCTAATTTGT+TGG | - | chr1.2:49184300-49184319 | MS.gene24604:CDS | 35.0% |
! | GTGCAAATTTTGGATTCTCA+AGG | - | chr1.2:49185281-49185300 | MS.gene24604:intron | 35.0% |
! | TCGATGAAGTTTTCAGCAAT+TGG | - | chr1.2:49183561-49183580 | MS.gene24604:intron | 35.0% |
! | TTCTCAAGGAGTAATGGAAA+TGG | - | chr1.2:49185295-49185314 | MS.gene24604:intron | 35.0% |
! | TTTCCACACTTTTCCTTCTA+TGG | - | chr1.2:49183086-49183105 | MS.gene24604:CDS | 35.0% |
! | TTTCCATTGCTTTCTAGAAG+TGG | - | chr1.2:49183302-49183321 | MS.gene24604:intron | 35.0% |
!! | AGGAAATCAAAGGGCATTAT+TGG | - | chr1.2:49183943-49183962 | MS.gene24604:CDS | 35.0% |
!! | CATTGATTCCTTAACCATCA+AGG | - | chr1.2:49183661-49183680 | MS.gene24604:intron | 35.0% |
AAGCTTCAAGTGATGATTGG+TGG | - | chr1.2:49183720-49183739 | MS.gene24604:intron | 40.0% | |
AATGATGCAGCAACATTCTC+AGG | + | chr1.2:49183821-49183840 | None:intergenic | 40.0% | |
ACAAGGTGGTGAAAACTTGA+GGG | - | chr1.2:49185333-49185352 | MS.gene24604:intron | 40.0% | |
AGTGATGTTACCATTGCAGT+AGG | - | chr1.2:49182971-49182990 | MS.gene24604:CDS | 40.0% | |
AGTTTCAGCCGAAAAATCCT+CGG | + | chr1.2:49183693-49183712 | None:intergenic | 40.0% | |
CACAAGCTTCAAGTGATGAT+TGG | - | chr1.2:49183717-49183736 | MS.gene24604:intron | 40.0% | |
CACTCAAACCAATATGGACA+TGG | - | chr1.2:49184844-49184863 | MS.gene24604:CDS | 40.0% | |
GAATGTTAACATGCACCTTG+TGG | + | chr1.2:49183015-49183034 | None:intergenic | 40.0% | |
GATGCACACACTATCTTCTT+AGG | - | chr1.2:49183059-49183078 | MS.gene24604:CDS | 40.0% | |
GCAGCAAGAGATTGAAACTT+AGG | + | chr1.2:49184370-49184389 | None:intergenic | 40.0% | |
GCTTGATGAAGTTGAACTTG+TGG | - | chr1.2:49184102-49184121 | MS.gene24604:CDS | 40.0% | |
GTGATGTTACCATTGCAGTA+GGG | - | chr1.2:49182972-49182991 | MS.gene24604:CDS | 40.0% | |
TAGCTGTTCTTAGCAACCTA+AGG | + | chr1.2:49184024-49184043 | None:intergenic | 40.0% | |
TGATGTTACCATTGCAGTAG+GGG | - | chr1.2:49182973-49182992 | MS.gene24604:CDS | 40.0% | |
TTGCACTTTGTGAAGTCTCA+AGG | + | chr1.2:49185267-49185286 | None:intergenic | 40.0% | |
! | AAGTTTTCACCACCTTGTGT+AGG | + | chr1.2:49185331-49185350 | None:intergenic | 40.0% |
! | AGTTTTCACCACCTTGTGTA+GGG | + | chr1.2:49185330-49185349 | None:intergenic | 40.0% |
! | GAGTAATGGAAATGGTCAAG+TGG | - | chr1.2:49185303-49185322 | MS.gene24604:intron | 40.0% |
! | GCTGACTCTACAAATGAAGA+TGG | - | chr1.2:49183344-49183363 | MS.gene24604:intron | 40.0% |
! | TCAAATGTTTTGTCTCCACC+AGG | + | chr1.2:49183401-49183420 | None:intergenic | 40.0% |
ACCACTGAGAGTAATAGTGC+AGG | - | chr1.2:49185177-49185196 | MS.gene24604:intron | 45.0% | |
ACCTGCACTATTACTCTCAG+TGG | + | chr1.2:49185181-49185200 | None:intergenic | 45.0% | |
ACTGGAGAAGGATCCTTGAT+TGG | - | chr1.2:49184253-49184272 | MS.gene24604:CDS | 45.0% | |
CAACTTCATGATGTACCTGG+TGG | - | chr1.2:49183383-49183402 | MS.gene24604:intron | 45.0% | |
CACAAGGTGGTGAAAACTTG+AGG | - | chr1.2:49185332-49185351 | MS.gene24604:intron | 45.0% | |
CAGAAGCAAGCATCACCTTA+AGG | + | chr1.2:49184453-49184472 | None:intergenic | 45.0% | |
GGACCATAGAAGGAAAAGTG+TGG | + | chr1.2:49183092-49183111 | None:intergenic | 45.0% | |
GTCAATTGTAGGCACATCCA+TGG | - | chr1.2:49185059-49185078 | MS.gene24604:intron | 45.0% | |
GTCGTGTACCATGTCCATAT+TGG | + | chr1.2:49184855-49184874 | None:intergenic | 45.0% | |
GTTGGATGCATATCTTGCTG+AGG | - | chr1.2:49184318-49184337 | MS.gene24604:CDS | 45.0% | |
TATGCTAGGCCATTGGATGA+TGG | - | chr1.2:49184403-49184422 | MS.gene24604:CDS | 45.0% | |
TCCAATGGCCTAGCATAATC+AGG | + | chr1.2:49184400-49184419 | None:intergenic | 45.0% | |
TCCTGATTATGCTAGGCCAT+TGG | - | chr1.2:49184396-49184415 | MS.gene24604:CDS | 45.0% | |
TCGTGTATCAGAGCTAGAGA+AGG | - | chr1.2:49185357-49185376 | MS.gene24604:intron | 45.0% | |
TGATGTTTCCCCTACTGCAA+TGG | + | chr1.2:49182984-49183003 | None:intergenic | 45.0% | |
TGCAACAAACGGACCATAGA+AGG | + | chr1.2:49183102-49183121 | None:intergenic | 45.0% | |
TGCATCAACTCCACCAATCA+AGG | + | chr1.2:49184269-49184288 | None:intergenic | 45.0% | |
TGCTACAGGGTTTGTACAAC+TGG | - | chr1.2:49182941-49182960 | MS.gene24604:CDS | 45.0% | |
! | GGAACATGCCTTGATGGTTA+AGG | + | chr1.2:49183672-49183691 | None:intergenic | 45.0% |
! | GGAGTAGTTGATGTTGTTCC+AGG | + | chr1.2:49184223-49184242 | None:intergenic | 45.0% |
! | GGCATGTTCCGAGGATTTTT+CGG | - | chr1.2:49183682-49183701 | MS.gene24604:intron | 45.0% |
AACCATCAAGGCATGTTCCG+AGG | - | chr1.2:49183673-49183692 | MS.gene24604:intron | 50.0% | |
ATCCTCGGAACATGCCTTGA+TGG | + | chr1.2:49183678-49183697 | None:intergenic | 50.0% | |
GGAGAAGGATCCTTGATTGG+TGG | - | chr1.2:49184256-49184275 | MS.gene24604:CDS | 50.0% | |
GGATGCATATCTTGCTGAGG+TGG | - | chr1.2:49184321-49184340 | MS.gene24604:CDS | 50.0% | |
GGTACACGACATTGACACGT+AGG | - | chr1.2:49184865-49184884 | MS.gene24604:CDS | 50.0% | |
CAAGTGGACCCTACACAAGG+TGG | - | chr1.2:49185319-49185338 | MS.gene24604:intron | 55.0% | |
GGTCAAGTGGACCCTACACA+AGG | - | chr1.2:49185316-49185335 | MS.gene24604:intron | 55.0% | |
TTCGTCGTGATGGCCACACA+TGG | - | chr1.2:49182776-49182795 | MS.gene24604:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 49182739 | 49185477 | 49182739 | ID=MS.gene24604 |
chr1.2 | mRNA | 49182739 | 49185477 | 49182739 | ID=MS.gene24604.t1;Parent=MS.gene24604 |
chr1.2 | exon | 49185419 | 49185477 | 49185419 | ID=MS.gene24604.t1.exon1;Parent=MS.gene24604.t1 |
chr1.2 | CDS | 49185419 | 49185477 | 49185419 | ID=cds.MS.gene24604.t1;Parent=MS.gene24604.t1 |
chr1.2 | exon | 49185198 | 49185267 | 49185198 | ID=MS.gene24604.t1.exon2;Parent=MS.gene24604.t1 |
chr1.2 | CDS | 49185198 | 49185267 | 49185198 | ID=cds.MS.gene24604.t1;Parent=MS.gene24604.t1 |
chr1.2 | exon | 49183760 | 49184914 | 49183760 | ID=MS.gene24604.t1.exon3;Parent=MS.gene24604.t1 |
chr1.2 | CDS | 49183760 | 49184914 | 49183760 | ID=cds.MS.gene24604.t1;Parent=MS.gene24604.t1 |
chr1.2 | exon | 49182739 | 49183146 | 49182739 | ID=MS.gene24604.t1.exon4;Parent=MS.gene24604.t1 |
chr1.2 | CDS | 49182739 | 49183146 | 49182739 | ID=cds.MS.gene24604.t1;Parent=MS.gene24604.t1 |
Gene Sequence |
Protein sequence |