Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26782.t1 | XP_024637989.1 | 99.1 | 750 | 7 | 0 | 1 | 750 | 1 | 750 | 0.00E+00 | 1497.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26782.t1 | A0A396IHZ2 | 99.1 | 750 | 7 | 0 | 1 | 750 | 1 | 750 | 0.0e+00 | 1497.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049807 | MS.gene26782 | 0.829146 | 6.06E-55 | -1.69E-46 |
| MS.gene049887 | MS.gene26782 | 0.801503 | 8.73E-49 | -1.69E-46 |
| MS.gene050551 | MS.gene26782 | 0.806124 | 9.58E-50 | -1.69E-46 |
| MS.gene050838 | MS.gene26782 | 0.809649 | 1.70E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene26782 | 0.839446 | 1.58E-57 | -1.69E-46 |
| MS.gene052609 | MS.gene26782 | 0.827915 | 1.20E-54 | -1.69E-46 |
| MS.gene053143 | MS.gene26782 | 0.811973 | 5.35E-51 | -1.69E-46 |
| MS.gene053144 | MS.gene26782 | 0.822938 | 1.81E-53 | -1.69E-46 |
| MS.gene054584 | MS.gene26782 | 0.813317 | 2.72E-51 | -1.69E-46 |
| MS.gene054824 | MS.gene26782 | 0.81701 | 4.12E-52 | -1.69E-46 |
| MS.gene055469 | MS.gene26782 | 0.839149 | 1.88E-57 | -1.69E-46 |
| MS.gene055513 | MS.gene26782 | 0.808068 | 3.71E-50 | -1.69E-46 |
| MS.gene055537 | MS.gene26782 | 0.804729 | 1.88E-49 | -1.69E-46 |
| MS.gene056507 | MS.gene26782 | 0.815614 | 8.45E-52 | -1.69E-46 |
| MS.gene058649 | MS.gene26782 | 0.806103 | 9.68E-50 | -1.69E-46 |
| MS.gene058668 | MS.gene26782 | 0.815482 | 9.04E-52 | -1.69E-46 |
| MS.gene059171 | MS.gene26782 | 0.820958 | 5.21E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26782.t1 | MTR_2g018850 | 29.319 | 191 | 127 | 3 | 230 | 413 | 261 | 450 | 4.83e-19 | 92.4 |
| MS.gene26782.t1 | MTR_8g464800 | 29.834 | 181 | 121 | 4 | 492 | 666 | 1 | 181 | 2.57e-17 | 85.1 |
| MS.gene26782.t1 | MTR_5g081480 | 33.083 | 133 | 69 | 4 | 630 | 749 | 651 | 776 | 1.73e-15 | 81.3 |
| MS.gene26782.t1 | MTR_6g086685 | 26.404 | 178 | 125 | 3 | 247 | 419 | 7 | 183 | 6.30e-14 | 71.2 |
| MS.gene26782.t1 | MTR_7g090610 | 27.451 | 204 | 114 | 5 | 560 | 749 | 14 | 197 | 3.26e-13 | 72.4 |
| MS.gene26782.t1 | MTR_0177s0050 | 25.000 | 152 | 111 | 2 | 192 | 342 | 238 | 387 | 2.77e-12 | 69.7 |
| MS.gene26782.t1 | MTR_6g462630 | 36.134 | 119 | 63 | 4 | 640 | 749 | 39 | 153 | 4.03e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26782.t1 | AT3G05850 | 57.867 | 769 | 296 | 7 | 7 | 748 | 4 | 771 | 0.0 | 885 |
| MS.gene26782.t1 | AT1G06740 | 35.195 | 591 | 356 | 10 | 175 | 747 | 141 | 722 | 7.72e-123 | 384 |
| MS.gene26782.t1 | AT1G64260 | 22.598 | 739 | 520 | 18 | 4 | 715 | 5 | 718 | 2.69e-40 | 159 |
| MS.gene26782.t1 | AT1G64260 | 22.598 | 739 | 520 | 18 | 4 | 715 | 5 | 718 | 2.69e-40 | 159 |
| MS.gene26782.t1 | AT1G49920 | 23.218 | 547 | 354 | 14 | 190 | 690 | 186 | 712 | 3.95e-33 | 137 |
| MS.gene26782.t1 | AT1G49920 | 23.218 | 547 | 354 | 14 | 190 | 690 | 186 | 712 | 3.95e-33 | 137 |
| MS.gene26782.t1 | AT1G64255 | 24.691 | 486 | 335 | 12 | 224 | 690 | 232 | 705 | 8.20e-30 | 126 |
| MS.gene26782.t1 | AT5G15685 | 29.839 | 248 | 165 | 5 | 190 | 432 | 183 | 426 | 7.23e-29 | 121 |
| MS.gene26782.t1 | AT1G64253 | 23.145 | 337 | 235 | 8 | 392 | 715 | 2 | 327 | 1.73e-19 | 92.0 |
| MS.gene26782.t1 | AT1G64253 | 23.629 | 237 | 169 | 5 | 487 | 715 | 19 | 251 | 9.13e-11 | 64.3 |
Find 167 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTTATGACATCAAATTT+TGG | 0.113475 | 8.2:+10261622 | MS.gene26782:CDS |
| CCTGCACAATCTCTTTGTTC+TGG | 0.154930 | 8.2:+10260476 | MS.gene26782:CDS |
| GATTCAACCTGCTTTGATTT+TGG | 0.203125 | 8.2:-10262150 | None:intergenic |
| TCAATGGCTGCTACATTAAT+AGG | 0.204895 | 8.2:-10260404 | None:intergenic |
| GATATCCTTTGGCCTGTAAT+TGG | 0.220676 | 8.2:-10260852 | None:intergenic |
| CAAACTGAACAAGGACTTAA+AGG | 0.227894 | 8.2:+10261411 | MS.gene26782:CDS |
| CTGCACAATCTCTTTGTTCT+GGG | 0.229547 | 8.2:+10260477 | MS.gene26782:CDS |
| AAATTGTTGATATTGATAAT+TGG | 0.248753 | 8.2:+10261884 | MS.gene26782:CDS |
| CGTAGTATTGAGAATATAAA+AGG | 0.273452 | 8.2:+10261517 | MS.gene26782:CDS |
| TCTTTGACGTTTGTCATCAT+TGG | 0.281932 | 8.2:-10260501 | None:intergenic |
| ATTGAAGCTGACGTTTAATT+AGG | 0.286176 | 8.2:-10262179 | None:intergenic |
| CAACTGGCATTGGTTTCTTC+AGG | 0.296129 | 8.2:+10261258 | MS.gene26782:CDS |
| CGCTAAAACTATTAAACCTT+TGG | 0.299997 | 8.2:-10260562 | None:intergenic |
| TCATTTCATGCCTCAATAAC+TGG | 0.305262 | 8.2:+10261085 | MS.gene26782:CDS |
| TGAAAGCTTCACCCAATTAC+AGG | 0.306875 | 8.2:+10260840 | MS.gene26782:CDS |
| AAAGTATCAAGGGGAATTAT+TGG | 0.307157 | 8.2:+10261162 | MS.gene26782:CDS |
| TGACATTGATCCATCTATAT+TGG | 0.310445 | 8.2:-10258906 | None:intergenic |
| GACGACATAAAGCGCGAGTA+TGG | 0.321301 | 8.2:+10260878 | MS.gene26782:CDS |
| ATGCCTCAATAACTGGTTTC+CGG | 0.324519 | 8.2:+10261092 | MS.gene26782:CDS |
| ACATCAATCATTTGAGTGAT+TGG | 0.329504 | 8.2:-10261685 | None:intergenic |
| ATGCCAGTTGTCTTCAGTTT+CGG | 0.342179 | 8.2:-10261245 | None:intergenic |
| GAGCGTCTGATGTTTCCTTT+TGG | 0.342716 | 8.2:-10261801 | None:intergenic |
| TACATTGCAATTGAAGGTTT+CGG | 0.348044 | 8.2:-10259002 | None:intergenic |
| ATGACCCAGTTGTATGCTTC+AGG | 0.348916 | 8.2:-10261547 | None:intergenic |
| CAACGGATGGTTAGTTTCCT+TGG | 0.350493 | 8.2:+10259100 | MS.gene26782:CDS |
| TCATGAGGCCAGACGTTTCA+TGG | 0.355335 | 8.2:+10261444 | MS.gene26782:CDS |
| AGGCATGAAATGATACAAAA+AGG | 0.364107 | 8.2:-10261075 | None:intergenic |
| GGAGAGGGCGACAGGCTTGC+CGG | 0.366956 | 8.2:-10261111 | None:intergenic |
| TGCAAGGGATGGAAACTTAC+TGG | 0.367103 | 8.2:+10261916 | MS.gene26782:CDS |
| AAGATAAAAGAGACTAATCC+TGG | 0.383049 | 8.2:+10261007 | MS.gene26782:CDS |
| TGGACTGGTTTGTCAATATC+TGG | 0.384054 | 8.2:-10262063 | None:intergenic |
| AATTGTTGATATTGATAATT+GGG | 0.386007 | 8.2:+10261885 | MS.gene26782:CDS |
| AACATCAAGTACTTCCTTCC+TGG | 0.387501 | 8.2:+10259034 | MS.gene26782:CDS |
| ATGTCGTCTGCGATATCCTT+TGG | 0.391266 | 8.2:-10260863 | None:intergenic |
| TTTATCTTCTCACAAAAGAA+TGG | 0.413555 | 8.2:-10260992 | None:intergenic |
| TTTCTCCTGAAGCATACAAC+TGG | 0.416731 | 8.2:+10261542 | MS.gene26782:CDS |
| ATATCCTTTGGCCTGTAATT+GGG | 0.438933 | 8.2:-10260851 | None:intergenic |
| TGGATAATTTCCTCCTTGGA+TGG | 0.440016 | 8.2:-10261781 | None:intergenic |
| GAATTTGTAACCAATATAGA+TGG | 0.446033 | 8.2:+10258896 | MS.gene26782:CDS |
| CTTTGTAGCTGTAGCAGCCA+TGG | 0.451242 | 8.2:-10258843 | None:intergenic |
| TGCGGTAAATGCAAGGGACT+TGG | 0.451657 | 8.2:+10262201 | MS.gene26782:CDS |
| GGTGCTTACATTGCAATTGA+AGG | 0.452249 | 8.2:-10259008 | None:intergenic |
| AATGCATTGGACCAGTGCTC+TGG | 0.455861 | 8.2:-10261580 | None:intergenic |
| AAAGAATACTGTCAAGGAAA+AGG | 0.457231 | 8.2:-10261132 | None:intergenic |
| GTCAAAGAGCGGCACAGCAG+TGG | 0.459050 | 8.2:+10260516 | MS.gene26782:CDS |
| GAAGGATCTGCTGTCAAAGC+TGG | 0.459403 | 8.2:+10260770 | MS.gene26782:CDS |
| CATAAATACTCCATTGCTCA+TGG | 0.463415 | 8.2:+10260602 | MS.gene26782:CDS |
| AAGGAAGTACTTGATGTTCA+TGG | 0.465370 | 8.2:-10259029 | None:intergenic |
| ATGCCTCTTTATAAGAGCCT+TGG | 0.465522 | 8.2:-10260958 | None:intergenic |
| AATGCATTGCTCAGCGTCAA+TGG | 0.475373 | 8.2:-10260420 | None:intergenic |
| CTGTCTTTGAATGTGTTGGT+AGG | 0.475394 | 8.2:+10261962 | MS.gene26782:CDS |
| ATCATTAACCATGAAACGTC+TGG | 0.476096 | 8.2:-10261452 | None:intergenic |
| ATATCTGGCAGAGCGTGAAT+TGG | 0.476248 | 8.2:-10262048 | None:intergenic |
| CAATGGCTGCTACATTAATA+GGG | 0.476408 | 8.2:-10260403 | None:intergenic |
| GCAAGGGACTTGGCCACAAT+CGG | 0.477266 | 8.2:+10262211 | MS.gene26782:CDS |
| TGCAACATTCACGACAAAAG+AGG | 0.481312 | 8.2:+10261036 | MS.gene26782:CDS |
| AAACTGAACAAGGACTTAAA+GGG | 0.481927 | 8.2:+10261412 | MS.gene26782:CDS |
| AAGGAAAAGGAGAGGGCGAC+AGG | 0.485747 | 8.2:-10261119 | None:intergenic |
| GTAAATCTCAAGGCTGTCCC+TGG | 0.488941 | 8.2:+10260675 | MS.gene26782:CDS |
| ATGCCGAAACTGAAGACAAC+TGG | 0.490063 | 8.2:+10261242 | MS.gene26782:CDS |
| TCCTTCACAAGTATGATCTC+TGG | 0.490803 | 8.2:-10260753 | None:intergenic |
| CAAGGAGGAAATTATCCAAA+AGG | 0.490970 | 8.2:+10261786 | MS.gene26782:CDS |
| AATTCTCAACTGTGAAGTAT+CGG | 0.493598 | 8.2:-10262005 | None:intergenic |
| TTATGCAATTGACATTGATC+AGG | 0.494241 | 8.2:+10258946 | MS.gene26782:CDS |
| CGACCAGGAGGACGCTTAGT+TGG | 0.496692 | 8.2:-10262126 | None:intergenic |
| TGGTCCAATGCATTCTTCAA+TGG | 0.497526 | 8.2:+10261589 | MS.gene26782:CDS |
| ATTGCTGTCTTTGAATGTGT+TGG | 0.497680 | 8.2:+10261958 | MS.gene26782:CDS |
| CTTTGACGCATATATTCTCC+AGG | 0.498153 | 8.2:-10260693 | None:intergenic |
| TGCTGCTTACGCATCCAAAC+CGG | 0.499342 | 8.2:+10261483 | MS.gene26782:CDS |
| CATCCAACATGCCTGCTAGT+AGG | 0.501700 | 8.2:+10259179 | MS.gene26782:CDS |
| ATATTTGAAAACTGCTACCA+CGG | 0.502913 | 8.2:+10261364 | MS.gene26782:CDS |
| CAAACCAGTCCAGGTTGAAT+CGG | 0.503060 | 8.2:+10262074 | MS.gene26782:CDS |
| GTTTGCACGTCTTCCGATTG+TGG | 0.503969 | 8.2:-10262224 | None:intergenic |
| ATTCTCAACTGTGAAGTATC+GGG | 0.507704 | 8.2:-10262004 | None:intergenic |
| GGTATCGAGCGACTAGAGGT+TGG | 0.509333 | 8.2:+10260792 | MS.gene26782:CDS |
| CTTCCATAGCCGATTCAACC+TGG | 0.511413 | 8.2:-10262083 | None:intergenic |
| ATCAGACGCTCGCTCACTAC+AGG | 0.514275 | 8.2:+10261813 | MS.gene26782:CDS |
| CCAGAACAAAGAGATTGTGC+AGG | 0.515447 | 8.2:-10260476 | None:intergenic |
| CATTACAGTGTCGAAAGATA+AGG | 0.518292 | 8.2:+10259072 | MS.gene26782:CDS |
| CCTTGTTCAGTTTGTCAGCA+AGG | 0.518369 | 8.2:-10261402 | None:intergenic |
| ATCGGGAACAATAATCATAT+AGG | 0.518434 | 8.2:-10261987 | None:intergenic |
| GTATCGAGCGACTAGAGGTT+GGG | 0.520425 | 8.2:+10260793 | MS.gene26782:CDS |
| TGCTCCATTGAAGAATGCAT+TGG | 0.520736 | 8.2:-10261593 | None:intergenic |
| TGCACAATCTCTTTGTTCTG+GGG | 0.521328 | 8.2:+10260478 | MS.gene26782:CDS |
| TCTACAACAGCAAAGGCTAC+AGG | 0.521980 | 8.2:-10261220 | None:intergenic |
| AAACTGAAGACAACTGGCAT+TGG | 0.522078 | 8.2:+10261248 | MS.gene26782:CDS |
| AGTTAAATTATTCTCAAGCA+TGG | 0.524598 | 8.2:+10260906 | MS.gene26782:CDS |
| CCAGGAGGACGCTTAGTTGG+TGG | 0.525231 | 8.2:-10262123 | None:intergenic |
| ACGACATAAAGCGCGAGTAT+GGG | 0.531442 | 8.2:+10260879 | MS.gene26782:CDS |
| TGTCTTTGAATGTGTTGGTA+GGG | 0.532718 | 8.2:+10261963 | MS.gene26782:CDS |
| AACAATTAGCACACGACGAG+AGG | 0.534057 | 8.2:+10261729 | MS.gene26782:CDS |
| TCAAAGAGCGGCACAGCAGT+GGG | 0.539158 | 8.2:+10260517 | MS.gene26782:CDS |
| GTGAATAACTACCTACTAGC+AGG | 0.540396 | 8.2:-10259190 | None:intergenic |
| TTGCCGGAAACCAGTTATTG+AGG | 0.542162 | 8.2:-10261095 | None:intergenic |
| TTGGCTGCAACTTCTGTCGA+TGG | 0.542172 | 8.2:+10261181 | MS.gene26782:CDS |
| CCACCAACTAAGCGTCCTCC+TGG | 0.542401 | 8.2:+10262123 | MS.gene26782:CDS |
| AGATAAGGATTTGCAACGGA+TGG | 0.544534 | 8.2:+10259087 | MS.gene26782:CDS |
| CAGTGGGAAAATACCATCAC+TGG | 0.547435 | 8.2:+10260533 | MS.gene26782:CDS |
| ACATTAATAGGGATAACAAC+AGG | 0.549105 | 8.2:-10260392 | None:intergenic |
| AGTCCAGGTTGAATCGGCTA+TGG | 0.549247 | 8.2:+10262080 | MS.gene26782:CDS |
| ATAGCCGATTCAACCTGGAC+TGG | 0.549788 | 8.2:-10262078 | None:intergenic |
| GAGGACGCTTAGTTGGTGGA+GGG | 0.559572 | 8.2:-10262119 | None:intergenic |
| GCTTCAATGCGGTAAATGCA+AGG | 0.559948 | 8.2:+10262194 | MS.gene26782:CDS |
| CCTTGCTGACAAACTGAACA+AGG | 0.563477 | 8.2:+10261402 | MS.gene26782:CDS |
| AGATATTGACAAACCAGTCC+AGG | 0.565631 | 8.2:+10262065 | MS.gene26782:CDS |
| ACTCCAAGGCTCTTATAAAG+AGG | 0.566265 | 8.2:+10260955 | MS.gene26782:CDS |
| ACCAGAGATCATACTTGTGA+AGG | 0.566536 | 8.2:+10260752 | MS.gene26782:CDS |
| GTGAATGTTGCAAAACTCCC+AGG | 0.568807 | 8.2:-10261025 | None:intergenic |
| CAATAGCATGGCAGCAAGGA+AGG | 0.574571 | 8.2:-10261939 | None:intergenic |
| ACTTCTGTCGATGGAAATGA+TGG | 0.575330 | 8.2:+10261190 | MS.gene26782:CDS |
| GGAGGACGCTTAGTTGGTGG+AGG | 0.576697 | 8.2:-10262120 | None:intergenic |
| TACAAAGTGAGCCAGAGCAC+TGG | 0.579145 | 8.2:+10261569 | MS.gene26782:CDS |
| CTACAGGTGTTGCTTTCACA+AGG | 0.581162 | 8.2:+10261829 | MS.gene26782:CDS |
| AACAAAATTGACACCATCCA+AGG | 0.581806 | 8.2:+10261768 | MS.gene26782:CDS |
| TAATTGGGATTGTAGCTGCA+AGG | 0.582427 | 8.2:+10261900 | MS.gene26782:CDS |
| AGTATTTATGCAATGCCTCT+CGG | 0.582480 | 8.2:-10260589 | None:intergenic |
| TGGTCGGCCAAAATCAAAGC+AGG | 0.582545 | 8.2:+10262143 | MS.gene26782:CDS |
| TAAATGAGGAAGTGGTGGCT+CGG | 0.583268 | 8.2:+10259152 | MS.gene26782:CDS |
| AGTTTAAAAGAATACTGTCA+AGG | 0.583589 | 8.2:-10261138 | None:intergenic |
| GTTTGTTATAAATGAGGAAG+TGG | 0.583832 | 8.2:+10259144 | MS.gene26782:CDS |
| TTTAAACTCAAAGTATCAAG+GGG | 0.584199 | 8.2:+10261153 | MS.gene26782:CDS |
| AGATAAAAGAGACTAATCCT+GGG | 0.595650 | 8.2:+10261008 | MS.gene26782:CDS |
| CGAGCGACTAGAGGTTGGGT+GGG | 0.595820 | 8.2:+10260797 | MS.gene26782:CDS |
| GACGAGAGGAGTCTAATCAA+TGG | 0.596180 | 8.2:+10261743 | MS.gene26782:CDS |
| TGATGTGTTTGTTATAAATG+AGG | 0.598386 | 8.2:+10259138 | MS.gene26782:CDS |
| GTAAGCAAAACCATGAGCAA+TGG | 0.599165 | 8.2:-10260612 | None:intergenic |
| ACGGTCAAATGTAAATCTCA+AGG | 0.600516 | 8.2:+10260665 | MS.gene26782:CDS |
| CCTTTGGTCTACACCAGTGA+TGG | 0.601976 | 8.2:-10260546 | None:intergenic |
| AAATGATAGTCATCGGGTCA+CGG | 0.602533 | 8.2:+10260646 | MS.gene26782:CDS |
| TCGAGCGACTAGAGGTTGGG+TGG | 0.606801 | 8.2:+10260796 | MS.gene26782:CDS |
| CAGAACAAAGAGATTGTGCA+GGG | 0.608579 | 8.2:-10260475 | None:intergenic |
| AAGGATCTGCTGTCAAAGCT+GGG | 0.609887 | 8.2:+10260771 | MS.gene26782:CDS |
| GGGATTGTAGCTGCAAGGGA+TGG | 0.612068 | 8.2:+10261905 | MS.gene26782:CDS |
| CTACCTACTAGCAGGCATGT+TGG | 0.612141 | 8.2:-10259182 | None:intergenic |
| TACTGTCAAGGAAAAGGAGA+GGG | 0.612619 | 8.2:-10261126 | None:intergenic |
| CAACTAAGCGTCCTCCTGGT+CGG | 0.615992 | 8.2:+10262127 | MS.gene26782:CDS |
| TTCGGCATCTACAACAGCAA+AGG | 0.618419 | 8.2:-10261227 | None:intergenic |
| ATAGCTATATGTCAATCAAG+AGG | 0.619889 | 8.2:+10258872 | MS.gene26782:CDS |
| GGTACCACATTTGAAGTCTG+TGG | 0.619906 | 8.2:+10261850 | MS.gene26782:CDS |
| TTCACCCAATTACAGGCCAA+AGG | 0.626468 | 8.2:+10260847 | MS.gene26782:CDS |
| CTTCAATGCGGTAAATGCAA+GGG | 0.629621 | 8.2:+10262195 | MS.gene26782:CDS |
| GATGGATCAATGTCATACAA+TGG | 0.629781 | 8.2:+10258914 | MS.gene26782:CDS |
| AATTGGGATTGTAGCTGCAA+GGG | 0.630644 | 8.2:+10261901 | MS.gene26782:CDS |
| CAACAGTGCTAGCATCTCCA+AGG | 0.632215 | 8.2:-10259117 | None:intergenic |
| ACAGCAATAGCATGGCAGCA+AGG | 0.633671 | 8.2:-10261943 | None:intergenic |
| CCATCACTGGTGTAGACCAA+AGG | 0.634322 | 8.2:+10260546 | MS.gene26782:CDS |
| TTCTCCTGAAGCATACAACT+GGG | 0.635931 | 8.2:+10261543 | MS.gene26782:CDS |
| TGTATTACGAGGTAACATGA+TGG | 0.636401 | 8.2:+10261705 | MS.gene26782:CDS |
| AAAGGGACAATTATCTCATG+AGG | 0.640743 | 8.2:+10261429 | MS.gene26782:CDS |
| ATTGCTAGAGAGCAACTCCA+AGG | 0.645401 | 8.2:+10260941 | MS.gene26782:CDS |
| ATGCATTCTTCAATGGAGCA+AGG | 0.649814 | 8.2:+10261596 | MS.gene26782:CDS |
| ATTCAAAGACAGCAATAGCA+TGG | 0.650011 | 8.2:-10261951 | None:intergenic |
| TGTTATAAATGAGGAAGTGG+TGG | 0.650228 | 8.2:+10259147 | MS.gene26782:CDS |
| GCTGGGTATCGAGCGACTAG+AGG | 0.658329 | 8.2:+10260788 | MS.gene26782:CDS |
| CTTGATGCAAATCAACTGAG+TGG | 0.664605 | 8.2:-10260723 | None:intergenic |
| AGGACGCTTAGTTGGTGGAG+GGG | 0.666771 | 8.2:-10262118 | None:intergenic |
| TTGTCCACAGACTTCAAATG+TGG | 0.667756 | 8.2:-10261854 | None:intergenic |
| CGAAAGATAAGGATTTGCAA+CGG | 0.672160 | 8.2:+10259083 | MS.gene26782:CDS |
| TGATGACAAACGTCAAAGAG+CGG | 0.673747 | 8.2:+10260505 | MS.gene26782:CDS |
| CAAATGATTGATGTATTACG+AGG | 0.686709 | 8.2:+10261694 | MS.gene26782:CDS |
| TTTGACGCATATATTCTCCA+GGG | 0.695094 | 8.2:-10260692 | None:intergenic |
| ATACTGTCAAGGAAAAGGAG+AGG | 0.711175 | 8.2:-10261127 | None:intergenic |
| AAAATTGACACCATCCAAGG+AGG | 0.714232 | 8.2:+10261771 | MS.gene26782:CDS |
| GGTGACGTAAACAATAGCCG+TGG | 0.719816 | 8.2:-10261381 | None:intergenic |
| GGATCAATGTCATACAATGG+TGG | 0.721707 | 8.2:+10258917 | MS.gene26782:CDS |
| ATTAAACGTCAGCTTCAATG+CGG | 0.724013 | 8.2:+10262183 | MS.gene26782:CDS |
| AGAACAAAGAGATTGTGCAG+GGG | 0.737676 | 8.2:-10260474 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAGTTTTTATCAAAAAT+AGG | - | chr8.2:10260086-10260105 | None:intergenic | 10.0% |
| !!! | TTAAGTTTTTATCAAAAATA+GGG | - | chr8.2:10260085-10260104 | None:intergenic | 10.0% |
| !! | AAAAGATATGAATCTAAATT+GGG | - | chr8.2:10260292-10260311 | None:intergenic | 15.0% |
| !! | AGATATCATATAGTTTAAAT+TGG | + | chr8.2:10259272-10259291 | MS.gene26782:intron | 15.0% |
| !! | ATAAAAAAAATGATAGTCAT+CGG | + | chr8.2:10260639-10260658 | MS.gene26782:CDS | 15.0% |
| !! | TAAAAGATATGAATCTAAAT+TGG | - | chr8.2:10260293-10260312 | None:intergenic | 15.0% |
| !!! | AAATTGTTGATATTGATAAT+TGG | + | chr8.2:10261884-10261903 | MS.gene26782:CDS | 15.0% |
| !!! | AATTGTTGATATTGATAATT+GGG | + | chr8.2:10261885-10261904 | MS.gene26782:CDS | 15.0% |
| !!! | AGATATTTTTACAAATATAC+AGG | - | chr8.2:10259731-10259750 | None:intergenic | 15.0% |
| !!! | GATATTTTTACAAATATACA+GGG | - | chr8.2:10259730-10259749 | None:intergenic | 15.0% |
| !!! | TTTATTTTATCTTTTGTTGA+AGG | - | chr8.2:10260132-10260151 | None:intergenic | 15.0% |
| !! | ACCATATTAAAATGAACATA+AGG | - | chr8.2:10259670-10259689 | None:intergenic | 20.0% |
| !! | TAAAAAAAATGATAGTCATC+GGG | + | chr8.2:10260640-10260659 | MS.gene26782:CDS | 20.0% |
| !!! | AATCTTATGACATCAAATTT+TGG | + | chr8.2:10261622-10261641 | MS.gene26782:CDS | 20.0% |
| !!! | ATCTTATGACATCAAATTTT+GGG | + | chr8.2:10261623-10261642 | MS.gene26782:CDS | 20.0% |
| !!! | GGAAAATTTTATAGAACATT+TGG | + | chr8.2:10260327-10260346 | MS.gene26782:intron | 20.0% |
| !!! | TCCTTATGTTCATTTTAATA+TGG | + | chr8.2:10259666-10259685 | MS.gene26782:intron | 20.0% |
| !!! | TTTTAAACTCAAAGTATCAA+GGG | + | chr8.2:10261152-10261171 | MS.gene26782:CDS | 20.0% |
| ! | AATAGTCATAATATATGCCA+TGG | - | chr8.2:10259611-10259630 | None:intergenic | 25.0% |
| ! | ACTTATTTGATCTTATTGAC+CGG | - | chr8.2:10260256-10260275 | None:intergenic | 25.0% |
| ! | AGTTAAATTATTCTCAAGCA+TGG | + | chr8.2:10260906-10260925 | MS.gene26782:CDS | 25.0% |
| ! | AGTTTAAAAGAATACTGTCA+AGG | - | chr8.2:10261141-10261160 | None:intergenic | 25.0% |
| ! | ATGATATCTATCAATAGCAA+AGG | - | chr8.2:10259261-10259280 | None:intergenic | 25.0% |
| ! | GAATTTGTAACCAATATAGA+TGG | + | chr8.2:10258896-10258915 | MS.gene26782:CDS | 25.0% |
| ! | TATGATGAGATTCACAATTT+GGG | + | chr8.2:10259917-10259936 | MS.gene26782:intron | 25.0% |
| ! | TGGCATATATTATGACTATT+CGG | + | chr8.2:10259611-10259630 | MS.gene26782:intron | 25.0% |
| ! | TTATGATGAGATTCACAATT+TGG | + | chr8.2:10259916-10259935 | MS.gene26782:intron | 25.0% |
| ! | TTTATCTTCTCACAAAAGAA+TGG | - | chr8.2:10260995-10261014 | None:intergenic | 25.0% |
| !! | AATAAGTTGAAAACAGCTTA+TGG | + | chr8.2:10260212-10260231 | MS.gene26782:intron | 25.0% |
| !! | CGTAGTATTGAGAATATAAA+AGG | + | chr8.2:10261517-10261536 | MS.gene26782:CDS | 25.0% |
| !! | TCTTTTACATGTGAATTGTT+TGG | + | chr8.2:10260306-10260325 | MS.gene26782:intron | 25.0% |
| !! | TTTAAACTCAAAGTATCAAG+GGG | + | chr8.2:10261153-10261172 | MS.gene26782:CDS | 25.0% |
| !!! | CTTTTAAACTCAAAGTATCA+AGG | + | chr8.2:10261151-10261170 | MS.gene26782:CDS | 25.0% |
| !!! | TGATGTGTTTGTTATAAATG+AGG | + | chr8.2:10259138-10259157 | MS.gene26782:CDS | 25.0% |
| AAACTGAACAAGGACTTAAA+GGG | + | chr8.2:10261412-10261431 | MS.gene26782:CDS | 30.0% | |
| AAAGAATACTGTCAAGGAAA+AGG | - | chr8.2:10261135-10261154 | None:intergenic | 30.0% | |
| AAGATAAAAGAGACTAATCC+TGG | + | chr8.2:10261007-10261026 | MS.gene26782:CDS | 30.0% | |
| AAGTTATTCTGTAGAGCTTA+TGG | + | chr8.2:10260188-10260207 | MS.gene26782:intron | 30.0% | |
| AATTCTCAACTGTGAAGTAT+CGG | - | chr8.2:10262008-10262027 | None:intergenic | 30.0% | |
| ACATCAATCATTTGAGTGAT+TGG | - | chr8.2:10261688-10261707 | None:intergenic | 30.0% | |
| ACATTAATAGGGATAACAAC+AGG | - | chr8.2:10260395-10260414 | None:intergenic | 30.0% | |
| AGATAAAAGAGACTAATCCT+GGG | + | chr8.2:10261008-10261027 | MS.gene26782:CDS | 30.0% | |
| AGGCATGAAATGATACAAAA+AGG | - | chr8.2:10261078-10261097 | None:intergenic | 30.0% | |
| ATACTACGTTCAAAAATCTC+CGG | - | chr8.2:10261505-10261524 | None:intergenic | 30.0% | |
| ATAGCTATATGTCAATCAAG+AGG | + | chr8.2:10258872-10258891 | MS.gene26782:CDS | 30.0% | |
| ATATTTGAAAACTGCTACCA+CGG | + | chr8.2:10261364-10261383 | MS.gene26782:CDS | 30.0% | |
| ATCAAATAAGTCAATCCAAC+TGG | + | chr8.2:10260265-10260284 | MS.gene26782:intron | 30.0% | |
| ATCGGGAACAATAATCATAT+AGG | - | chr8.2:10261990-10262009 | None:intergenic | 30.0% | |
| ATGGAAACAAACGTAAAACA+TGG | - | chr8.2:10259985-10260004 | None:intergenic | 30.0% | |
| ATTGAAGCTGACGTTTAATT+AGG | - | chr8.2:10262182-10262201 | None:intergenic | 30.0% | |
| CAAATGATTGATGTATTACG+AGG | + | chr8.2:10261694-10261713 | MS.gene26782:CDS | 30.0% | |
| CAATCGATACAAATATCTAG+TGG | + | chr8.2:10259402-10259421 | MS.gene26782:intron | 30.0% | |
| CGCTAAAACTATTAAACCTT+TGG | - | chr8.2:10260565-10260584 | None:intergenic | 30.0% | |
| GTTAACCATGCTGTAAAATA+TGG | - | chr8.2:10259368-10259387 | None:intergenic | 30.0% | |
| TACATTGCAATTGAAGGTTT+CGG | - | chr8.2:10259005-10259024 | None:intergenic | 30.0% | |
| TCAAATAAGTCAATCCAACT+GGG | + | chr8.2:10260266-10260285 | MS.gene26782:intron | 30.0% | |
| TGACATTGATCCATCTATAT+TGG | - | chr8.2:10258909-10258928 | None:intergenic | 30.0% | |
| TTATGCAATTGACATTGATC+AGG | + | chr8.2:10258946-10258965 | MS.gene26782:CDS | 30.0% | |
| ! | AAAGTATCAAGGGGAATTAT+TGG | + | chr8.2:10261162-10261181 | MS.gene26782:CDS | 30.0% |
| ! | GTTTTCAAATATCTCAGACA+AGG | - | chr8.2:10261356-10261375 | None:intergenic | 30.0% |
| ! | TTGAACCATATTTTACAGCA+TGG | + | chr8.2:10259360-10259379 | MS.gene26782:intron | 30.0% |
| ! | TTGTTGCAGATTTTCAGAAT+GGG | + | chr8.2:10261320-10261339 | MS.gene26782:CDS | 30.0% |
| ! | TTTGTTGCAGATTTTCAGAA+TGG | + | chr8.2:10261319-10261338 | MS.gene26782:CDS | 30.0% |
| !! | GTTTGTTATAAATGAGGAAG+TGG | + | chr8.2:10259144-10259163 | MS.gene26782:CDS | 30.0% |
| !! | TATAGAACATTTGGTAATGC+AGG | + | chr8.2:10260336-10260355 | MS.gene26782:intron | 30.0% |
| AAAGGGACAATTATCTCATG+AGG | + | chr8.2:10261429-10261448 | MS.gene26782:CDS | 35.0% | |
| AACAAAATTGACACCATCCA+AGG | + | chr8.2:10261768-10261787 | MS.gene26782:CDS | 35.0% | |
| AATGAACCAAGACTCAAACA+GGG | - | chr8.2:10259452-10259471 | None:intergenic | 35.0% | |
| ACGGTCAAATGTAAATCTCA+AGG | + | chr8.2:10260665-10260684 | MS.gene26782:CDS | 35.0% | |
| AGATTCACAATTTGGGAAGT+AGG | + | chr8.2:10259924-10259943 | MS.gene26782:intron | 35.0% | |
| AGTATTTATGCAATGCCTCT+CGG | - | chr8.2:10260592-10260611 | None:intergenic | 35.0% | |
| ATATCCTTTGGCCTGTAATT+GGG | - | chr8.2:10260854-10260873 | None:intergenic | 35.0% | |
| ATCATTAACCATGAAACGTC+TGG | - | chr8.2:10261455-10261474 | None:intergenic | 35.0% | |
| ATGAACCATGCTGTAAAATG+TGG | - | chr8.2:10259798-10259817 | None:intergenic | 35.0% | |
| ATGATGTCTATCGATAGCAA+AGG | - | chr8.2:10259694-10259713 | None:intergenic | 35.0% | |
| ATGGTTGTGACCAAAATGAA+TGG | + | chr8.2:10259585-10259604 | MS.gene26782:intron | 35.0% | |
| ATTAAACGTCAGCTTCAATG+CGG | + | chr8.2:10262183-10262202 | MS.gene26782:CDS | 35.0% | |
| ATTCAAAGACAGCAATAGCA+TGG | - | chr8.2:10261954-10261973 | None:intergenic | 35.0% | |
| ATTGCTGTCTTTGAATGTGT+TGG | + | chr8.2:10261958-10261977 | MS.gene26782:CDS | 35.0% | |
| CAAACTGAACAAGGACTTAA+AGG | + | chr8.2:10261411-10261430 | MS.gene26782:CDS | 35.0% | |
| CAAGGAGGAAATTATCCAAA+AGG | + | chr8.2:10261786-10261805 | MS.gene26782:CDS | 35.0% | |
| CAATGGCTGCTACATTAATA+GGG | - | chr8.2:10260406-10260425 | None:intergenic | 35.0% | |
| CAGGGATTCATCTTCAAAAT+AGG | - | chr8.2:10259434-10259453 | None:intergenic | 35.0% | |
| CATAAATACTCCATTGCTCA+TGG | + | chr8.2:10260602-10260621 | MS.gene26782:CDS | 35.0% | |
| CCAATGTCTAACATATGCTA+TGG | - | chr8.2:10260062-10260081 | None:intergenic | 35.0% | |
| CCATAGCATATGTTAGACAT+TGG | + | chr8.2:10260059-10260078 | MS.gene26782:intron | 35.0% | |
| CGAAAGATAAGGATTTGCAA+CGG | + | chr8.2:10259083-10259102 | MS.gene26782:CDS | 35.0% | |
| CTGTGATGTGATTCACAATT+CGG | + | chr8.2:10259490-10259509 | MS.gene26782:intron | 35.0% | |
| GAAATGATACAAAAAGGCGA+TGG | - | chr8.2:10261072-10261091 | None:intergenic | 35.0% | |
| GATGGATCAATGTCATACAA+TGG | + | chr8.2:10258914-10258933 | MS.gene26782:CDS | 35.0% | |
| TAATGAACCAAGACTCAAAC+AGG | - | chr8.2:10259453-10259472 | None:intergenic | 35.0% | |
| TCAATGGCTGCTACATTAAT+AGG | - | chr8.2:10260407-10260426 | None:intergenic | 35.0% | |
| TCATTTCATGCCTCAATAAC+TGG | + | chr8.2:10261085-10261104 | MS.gene26782:CDS | 35.0% | |
| TCTTTGACGTTTGTCATCAT+TGG | - | chr8.2:10260504-10260523 | None:intergenic | 35.0% | |
| TGATTCACAATTCGGAAAGT+AGG | + | chr8.2:10259498-10259517 | MS.gene26782:intron | 35.0% | |
| TGTATTACGAGGTAACATGA+TGG | + | chr8.2:10261705-10261724 | MS.gene26782:CDS | 35.0% | |
| TGTTATAAATGAGGAAGTGG+TGG | + | chr8.2:10259147-10259166 | MS.gene26782:CDS | 35.0% | |
| TTTGACGCATATATTCTCCA+GGG | - | chr8.2:10260695-10260714 | None:intergenic | 35.0% | |
| ! | ACGTAGGTCGGATTTTTATA+TGG | - | chr8.2:10260004-10260023 | None:intergenic | 35.0% |
| ! | ATTCTCAACTGTGAAGTATC+GGG | - | chr8.2:10262007-10262026 | None:intergenic | 35.0% |
| ! | ATTTTATTGTTGGGTGTCAG+AGG | + | chr8.2:10261651-10261670 | MS.gene26782:CDS | 35.0% |
| ! | CATGTTTTACAGTTGTCATC+CGG | + | chr8.2:10259557-10259576 | MS.gene26782:intron | 35.0% |
| ! | CATTACAGTGTCGAAAGATA+AGG | + | chr8.2:10259072-10259091 | MS.gene26782:CDS | 35.0% |
| ! | CTTTTGGATAATTTCCTCCT+TGG | - | chr8.2:10261788-10261807 | None:intergenic | 35.0% |
| ! | TATGCTATGGCCATTCATTT+TGG | - | chr8.2:10260049-10260068 | None:intergenic | 35.0% |
| ! | TCTAACCACATTTTACAGCA+TGG | + | chr8.2:10259790-10259809 | MS.gene26782:intron | 35.0% |
| ! | TGGGCAGCAATTTTATTGTT+GGG | + | chr8.2:10261642-10261661 | MS.gene26782:CDS | 35.0% |
| ! | TGTCTTTGAATGTGTTGGTA+GGG | + | chr8.2:10261963-10261982 | MS.gene26782:CDS | 35.0% |
| ! | TTGGGCAGCAATTTTATTGT+TGG | + | chr8.2:10261641-10261660 | MS.gene26782:CDS | 35.0% |
| !! | AAGGAAGTACTTGATGTTCA+TGG | - | chr8.2:10259032-10259051 | None:intergenic | 35.0% |
| !! | GATTCAACCTGCTTTGATTT+TGG | - | chr8.2:10262153-10262172 | None:intergenic | 35.0% |
| AAAATTGACACCATCCAAGG+AGG | + | chr8.2:10261771-10261790 | MS.gene26782:CDS | 40.0% | |
| AAACTGAAGACAACTGGCAT+TGG | + | chr8.2:10261248-10261267 | MS.gene26782:CDS | 40.0% | |
| AAATGATAGTCATCGGGTCA+CGG | + | chr8.2:10260646-10260665 | MS.gene26782:CDS | 40.0% | |
| AACATCAAGTACTTCCTTCC+TGG | + | chr8.2:10259034-10259053 | MS.gene26782:CDS | 40.0% | |
| AATTGGGATTGTAGCTGCAA+GGG | + | chr8.2:10261901-10261920 | MS.gene26782:CDS | 40.0% | |
| ACCAGAGATCATACTTGTGA+AGG | + | chr8.2:10260752-10260771 | MS.gene26782:CDS | 40.0% | |
| ACGTTCAAAAATCTCCGGTT+TGG | - | chr8.2:10261500-10261519 | None:intergenic | 40.0% | |
| ACTCCAAGGCTCTTATAAAG+AGG | + | chr8.2:10260955-10260974 | MS.gene26782:CDS | 40.0% | |
| ACTTCTGTCGATGGAAATGA+TGG | + | chr8.2:10261190-10261209 | MS.gene26782:CDS | 40.0% | |
| AGAACAAAGAGATTGTGCAG+GGG | - | chr8.2:10260477-10260496 | None:intergenic | 40.0% | |
| AGATAAGGATTTGCAACGGA+TGG | + | chr8.2:10259087-10259106 | MS.gene26782:CDS | 40.0% | |
| AGATATTGACAAACCAGTCC+AGG | + | chr8.2:10262065-10262084 | MS.gene26782:CDS | 40.0% | |
| ATACTGTCAAGGAAAAGGAG+AGG | - | chr8.2:10261130-10261149 | None:intergenic | 40.0% | |
| ATGAATCCCTGTTTGAGTCT+TGG | + | chr8.2:10259443-10259462 | MS.gene26782:intron | 40.0% | |
| ATGCATTCTTCAATGGAGCA+AGG | + | chr8.2:10261596-10261615 | MS.gene26782:CDS | 40.0% | |
| ATGCCAGTTGTCTTCAGTTT+CGG | - | chr8.2:10261248-10261267 | None:intergenic | 40.0% | |
| ATGCCTCTTTATAAGAGCCT+TGG | - | chr8.2:10260961-10260980 | None:intergenic | 40.0% | |
| CAGAACAAAGAGATTGTGCA+GGG | - | chr8.2:10260478-10260497 | None:intergenic | 40.0% | |
| CGGATGACAACTGTAAAACA+TGG | - | chr8.2:10259559-10259578 | None:intergenic | 40.0% | |
| CTGCACAATCTCTTTGTTCT+GGG | + | chr8.2:10260477-10260496 | MS.gene26782:CDS | 40.0% | |
| CTTCAATGCGGTAAATGCAA+GGG | + | chr8.2:10262195-10262214 | MS.gene26782:CDS | 40.0% | |
| CTTGATGCAAATCAACTGAG+TGG | - | chr8.2:10260726-10260745 | None:intergenic | 40.0% | |
| CTTTGACGCATATATTCTCC+AGG | - | chr8.2:10260696-10260715 | None:intergenic | 40.0% | |
| GAATCACATCACAGTGAATC+AGG | - | chr8.2:10259484-10259503 | None:intergenic | 40.0% | |
| GATATCCTTTGGCCTGTAAT+TGG | - | chr8.2:10260855-10260874 | None:intergenic | 40.0% | |
| GATATGTCAAGTGCTTATGC+CGG | + | chr8.2:10260234-10260253 | MS.gene26782:intron | 40.0% | |
| GGATCAATGTCATACAATGG+TGG | + | chr8.2:10258917-10258936 | MS.gene26782:CDS | 40.0% | |
| GGTGCTTACATTGCAATTGA+AGG | - | chr8.2:10259011-10259030 | None:intergenic | 40.0% | |
| GTAAGCAAAACCATGAGCAA+TGG | - | chr8.2:10260615-10260634 | None:intergenic | 40.0% | |
| GTGAATAACTACCTACTAGC+AGG | - | chr8.2:10259193-10259212 | None:intergenic | 40.0% | |
| GTGGATGTGACCAAAATGAA+TGG | + | chr8.2:10260036-10260055 | MS.gene26782:intron | 40.0% | |
| TAATTGGGATTGTAGCTGCA+AGG | + | chr8.2:10261900-10261919 | MS.gene26782:CDS | 40.0% | |
| TACTGTCAAGGAAAAGGAGA+GGG | - | chr8.2:10261129-10261148 | None:intergenic | 40.0% | |
| TCCTTCACAAGTATGATCTC+TGG | - | chr8.2:10260756-10260775 | None:intergenic | 40.0% | |
| TGAAAGCTTCACCCAATTAC+AGG | + | chr8.2:10260840-10260859 | MS.gene26782:CDS | 40.0% | |
| TGATGACAAACGTCAAAGAG+CGG | + | chr8.2:10260505-10260524 | MS.gene26782:CDS | 40.0% | |
| TGCAACATTCACGACAAAAG+AGG | + | chr8.2:10261036-10261055 | MS.gene26782:CDS | 40.0% | |
| TGCACAATCTCTTTGTTCTG+GGG | + | chr8.2:10260478-10260497 | MS.gene26782:CDS | 40.0% | |
| TGCTCCATTGAAGAATGCAT+TGG | - | chr8.2:10261596-10261615 | None:intergenic | 40.0% | |
| TGGATAATTTCCTCCTTGGA+TGG | - | chr8.2:10261784-10261803 | None:intergenic | 40.0% | |
| TGGTCCAATGCATTCTTCAA+TGG | + | chr8.2:10261589-10261608 | MS.gene26782:CDS | 40.0% | |
| TTCTCCTGAAGCATACAACT+GGG | + | chr8.2:10261543-10261562 | MS.gene26782:CDS | 40.0% | |
| TTGGTCACAACCATGATATC+CGG | - | chr8.2:10259579-10259598 | None:intergenic | 40.0% | |
| TTGTCCACAGACTTCAAATG+TGG | - | chr8.2:10261857-10261876 | None:intergenic | 40.0% | |
| TTTCTCCTGAAGCATACAAC+TGG | + | chr8.2:10261542-10261561 | MS.gene26782:CDS | 40.0% | |
| ! | ATGAGCGTTTTCTTATTGCC+AGG | - | chr8.2:10259055-10259074 | None:intergenic | 40.0% |
| ! | ATGCCTCAATAACTGGTTTC+CGG | + | chr8.2:10261092-10261111 | MS.gene26782:CDS | 40.0% |
| ! | CTGTCTTTGAATGTGTTGGT+AGG | + | chr8.2:10261962-10261981 | MS.gene26782:CDS | 40.0% |
| ! | TATGCCATGGCCATTCATTT+TGG | - | chr8.2:10259598-10259617 | None:intergenic | 40.0% |
| !! | TGGACTGGTTTGTCAATATC+TGG | - | chr8.2:10262066-10262085 | None:intergenic | 40.0% |
| !!! | TAGTTTTAGCGAATTCCGAG+AGG | + | chr8.2:10260574-10260593 | MS.gene26782:CDS | 40.0% |
| AACAATTAGCACACGACGAG+AGG | + | chr8.2:10261729-10261748 | MS.gene26782:CDS | 45.0% | |
| AAGGATCTGCTGTCAAAGCT+GGG | + | chr8.2:10260771-10260790 | MS.gene26782:CDS | 45.0% | |
| AATGCATTGCTCAGCGTCAA+TGG | - | chr8.2:10260423-10260442 | None:intergenic | 45.0% | |
| ACGACATAAAGCGCGAGTAT+GGG | + | chr8.2:10260879-10260898 | MS.gene26782:CDS | 45.0% | |
| ATATCTGGCAGAGCGTGAAT+TGG | - | chr8.2:10262051-10262070 | None:intergenic | 45.0% | |
| ATGACCCAGTTGTATGCTTC+AGG | - | chr8.2:10261550-10261569 | None:intergenic | 45.0% | |
| ATGCCGAAACTGAAGACAAC+TGG | + | chr8.2:10261242-10261261 | MS.gene26782:CDS | 45.0% | |
| ATGTCGTCTGCGATATCCTT+TGG | - | chr8.2:10260866-10260885 | None:intergenic | 45.0% | |
| ATTGCTAGAGAGCAACTCCA+AGG | + | chr8.2:10260941-10260960 | MS.gene26782:CDS | 45.0% | |
| CAGTGGGAAAATACCATCAC+TGG | + | chr8.2:10260533-10260552 | MS.gene26782:CDS | 45.0% | |
| CAGTTGTCATCCGGATATCA+TGG | + | chr8.2:10259566-10259585 | MS.gene26782:intron | 45.0% | |
| CCAGAACAAAGAGATTGTGC+AGG | - | chr8.2:10260479-10260498 | None:intergenic | 45.0% | |
| CCTGCACAATCTCTTTGTTC+TGG | + | chr8.2:10260476-10260495 | MS.gene26782:CDS | 45.0% | |
| CCTTGCTGACAAACTGAACA+AGG | + | chr8.2:10261402-10261421 | MS.gene26782:CDS | 45.0% | |
| CCTTGTTCAGTTTGTCAGCA+AGG | - | chr8.2:10261405-10261424 | None:intergenic | 45.0% | |
| GAATCTAAATTGGGCCCAGT+TGG | - | chr8.2:10260283-10260302 | None:intergenic | 45.0% | |
| GACATCGCAATTACGTAGGT+CGG | - | chr8.2:10260016-10260035 | None:intergenic | 45.0% | |
| GACGAGAGGAGTCTAATCAA+TGG | + | chr8.2:10261743-10261762 | MS.gene26782:CDS | 45.0% | |
| GCTTCAATGCGGTAAATGCA+AGG | + | chr8.2:10262194-10262213 | MS.gene26782:CDS | 45.0% | |
| GTGAATGTTGCAAAACTCCC+AGG | - | chr8.2:10261028-10261047 | None:intergenic | 45.0% | |
| GTGACCAAAATGAATGGCCA+TGG | + | chr8.2:10259591-10259610 | MS.gene26782:intron | 45.0% | |
| TAAATGAGGAAGTGGTGGCT+CGG | + | chr8.2:10259152-10259171 | MS.gene26782:CDS | 45.0% | |
| TCTACAACAGCAAAGGCTAC+AGG | - | chr8.2:10261223-10261242 | None:intergenic | 45.0% | |
| TGCAAGGGATGGAAACTTAC+TGG | + | chr8.2:10261916-10261935 | MS.gene26782:CDS | 45.0% | |
| TTCACCCAATTACAGGCCAA+AGG | + | chr8.2:10260847-10260866 | MS.gene26782:CDS | 45.0% | |
| TTCGGCATCTACAACAGCAA+AGG | - | chr8.2:10261230-10261249 | None:intergenic | 45.0% | |
| TTGCCGGAAACCAGTTATTG+AGG | - | chr8.2:10261098-10261117 | None:intergenic | 45.0% | |
| ! | CAAACCAGTCCAGGTTGAAT+CGG | + | chr8.2:10262074-10262093 | MS.gene26782:CDS | 45.0% |
| ! | GAGCGTCTGATGTTTCCTTT+TGG | - | chr8.2:10261804-10261823 | None:intergenic | 45.0% |
| ! | GCGTTTTCTTATTGCCAGGA+AGG | - | chr8.2:10259051-10259070 | None:intergenic | 45.0% |
| ! | GGTACCACATTTGAAGTCTG+TGG | + | chr8.2:10261850-10261869 | MS.gene26782:CDS | 45.0% |
| !! | CAACGGATGGTTAGTTTCCT+TGG | + | chr8.2:10259100-10259119 | MS.gene26782:CDS | 45.0% |
| !! | CAACTGGCATTGGTTTCTTC+AGG | + | chr8.2:10261258-10261277 | MS.gene26782:CDS | 45.0% |
| !! | CTACAGGTGTTGCTTTCACA+AGG | + | chr8.2:10261829-10261848 | MS.gene26782:CDS | 45.0% |
| AATGCATTGGACCAGTGCTC+TGG | - | chr8.2:10261583-10261602 | None:intergenic | 50.0% | |
| ACAGCAATAGCATGGCAGCA+AGG | - | chr8.2:10261946-10261965 | None:intergenic | 50.0% | |
| CAACAGTGCTAGCATCTCCA+AGG | - | chr8.2:10259120-10259139 | None:intergenic | 50.0% | |
| CAATAGCATGGCAGCAAGGA+AGG | - | chr8.2:10261942-10261961 | None:intergenic | 50.0% | |
| CATCCAACATGCCTGCTAGT+AGG | + | chr8.2:10259179-10259198 | MS.gene26782:CDS | 50.0% | |
| CCACGACATCGCAATTACGT+AGG | - | chr8.2:10260020-10260039 | None:intergenic | 50.0% | |
| CCATCACTGGTGTAGACCAA+AGG | + | chr8.2:10260546-10260565 | MS.gene26782:CDS | 50.0% | |
| CCTACGTAATTGCGATGTCG+TGG | + | chr8.2:10260017-10260036 | MS.gene26782:intron | 50.0% | |
| CCTTTGGTCTACACCAGTGA+TGG | - | chr8.2:10260549-10260568 | None:intergenic | 50.0% | |
| CTACCTACTAGCAGGCATGT+TGG | - | chr8.2:10259185-10259204 | None:intergenic | 50.0% | |
| GAAGGATCTGCTGTCAAAGC+TGG | + | chr8.2:10260770-10260789 | MS.gene26782:CDS | 50.0% | |
| GACGACATAAAGCGCGAGTA+TGG | + | chr8.2:10260878-10260897 | MS.gene26782:CDS | 50.0% | |
| GGTGACGTAAACAATAGCCG+TGG | - | chr8.2:10261384-10261403 | None:intergenic | 50.0% | |
| GTAAATCTCAAGGCTGTCCC+TGG | + | chr8.2:10260675-10260694 | MS.gene26782:CDS | 50.0% | |
| GTATCGAGCGACTAGAGGTT+GGG | + | chr8.2:10260793-10260812 | MS.gene26782:CDS | 50.0% | |
| GTTTGCACGTCTTCCGATTG+TGG | - | chr8.2:10262227-10262246 | None:intergenic | 50.0% | |
| TACAAAGTGAGCCAGAGCAC+TGG | + | chr8.2:10261569-10261588 | MS.gene26782:CDS | 50.0% | |
| TCATGAGGCCAGACGTTTCA+TGG | + | chr8.2:10261444-10261463 | MS.gene26782:CDS | 50.0% | |
| TGCGGTAAATGCAAGGGACT+TGG | + | chr8.2:10262201-10262220 | MS.gene26782:CDS | 50.0% | |
| TGGTCGGCCAAAATCAAAGC+AGG | + | chr8.2:10262143-10262162 | MS.gene26782:CDS | 50.0% | |
| TTGGCTGCAACTTCTGTCGA+TGG | + | chr8.2:10261181-10261200 | MS.gene26782:CDS | 50.0% | |
| ! | AGTCCAGGTTGAATCGGCTA+TGG | + | chr8.2:10262080-10262099 | MS.gene26782:CDS | 50.0% |
| ! | ATAGCCGATTCAACCTGGAC+TGG | - | chr8.2:10262081-10262100 | None:intergenic | 50.0% |
| ! | CTTCCATAGCCGATTCAACC+TGG | - | chr8.2:10262086-10262105 | None:intergenic | 50.0% |
| ! | TGCTGCTTACGCATCCAAAC+CGG | + | chr8.2:10261483-10261502 | MS.gene26782:CDS | 50.0% |
| !! | TGCTTTGATTTTGGCCGACC+AGG | - | chr8.2:10262144-10262163 | None:intergenic | 50.0% |
| !! | TTTGATTTTGGCCGACCAGG+AGG | - | chr8.2:10262141-10262160 | None:intergenic | 50.0% |
| AAGGAAAAGGAGAGGGCGAC+AGG | - | chr8.2:10261122-10261141 | None:intergenic | 55.0% | |
| ATCAGACGCTCGCTCACTAC+AGG | + | chr8.2:10261813-10261832 | MS.gene26782:CDS | 55.0% | |
| CAACTAAGCGTCCTCCTGGT+CGG | + | chr8.2:10262127-10262146 | MS.gene26782:CDS | 55.0% | |
| GCAAGGGACTTGGCCACAAT+CGG | + | chr8.2:10262211-10262230 | MS.gene26782:CDS | 55.0% | |
| GGGATTGTAGCTGCAAGGGA+TGG | + | chr8.2:10261905-10261924 | MS.gene26782:CDS | 55.0% | |
| TCAAAGAGCGGCACAGCAGT+GGG | + | chr8.2:10260517-10260536 | MS.gene26782:CDS | 55.0% | |
| ! | GGTATCGAGCGACTAGAGGT+TGG | + | chr8.2:10260792-10260811 | MS.gene26782:CDS | 55.0% |
| !! | AGGACGCTTAGTTGGTGGAG+GGG | - | chr8.2:10262121-10262140 | None:intergenic | 55.0% |
| !! | GAGGACGCTTAGTTGGTGGA+GGG | - | chr8.2:10262122-10262141 | None:intergenic | 55.0% |
| CCACCAACTAAGCGTCCTCC+TGG | + | chr8.2:10262123-10262142 | MS.gene26782:CDS | 60.0% | |
| CCAGGAGGACGCTTAGTTGG+TGG | - | chr8.2:10262126-10262145 | None:intergenic | 60.0% | |
| CGACCAGGAGGACGCTTAGT+TGG | - | chr8.2:10262129-10262148 | None:intergenic | 60.0% | |
| CGAGCGACTAGAGGTTGGGT+GGG | + | chr8.2:10260797-10260816 | MS.gene26782:CDS | 60.0% | |
| GTCAAAGAGCGGCACAGCAG+TGG | + | chr8.2:10260516-10260535 | MS.gene26782:CDS | 60.0% | |
| TCGAGCGACTAGAGGTTGGG+TGG | + | chr8.2:10260796-10260815 | MS.gene26782:CDS | 60.0% | |
| !! | GCTGGGTATCGAGCGACTAG+AGG | + | chr8.2:10260788-10260807 | MS.gene26782:CDS | 60.0% |
| !! | GGAGGACGCTTAGTTGGTGG+AGG | - | chr8.2:10262123-10262142 | None:intergenic | 60.0% |
| GGAGAGGGCGACAGGCTTGC+CGG | - | chr8.2:10261114-10261133 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 10258845 | 10262254 | 10258845 | ID=MS.gene26782 |
| chr8.2 | mRNA | 10258845 | 10262254 | 10258845 | ID=MS.gene26782.t1;Parent=MS.gene26782 |
| chr8.2 | exon | 10258845 | 10259200 | 10258845 | ID=MS.gene26782.t1.exon1;Parent=MS.gene26782.t1 |
| chr8.2 | CDS | 10258845 | 10259200 | 10258845 | ID=cds.MS.gene26782.t1;Parent=MS.gene26782.t1 |
| chr8.2 | exon | 10260358 | 10262254 | 10260358 | ID=MS.gene26782.t1.exon2;Parent=MS.gene26782.t1 |
| chr8.2 | CDS | 10260358 | 10262254 | 10260358 | ID=cds.MS.gene26782.t1;Parent=MS.gene26782.t1 |
| Gene Sequence |
| Protein sequence |
