AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene27335

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27335.t1 MTR_1g057860 73.836 795 165 12 3 764 4 788 0.0 1097
MS.gene27335.t1 MTR_1g022010 67.153 274 21 5 557 827 49 256 7.10e-107 332
MS.gene27335.t1 MTR_4g129940 70.370 135 40 0 410 544 49 183 2.11e-61 206
MS.gene27335.t1 MTR_5g091860 86.364 110 15 0 600 709 14 123 3.57e-58 196
MS.gene27335.t1 MTR_1g057880 66.667 144 21 2 600 743 3 119 7.85e-54 183
MS.gene27335.t1 MTR_7g101940 29.912 341 210 10 409 740 87 407 1.24e-34 139
MS.gene27335.t1 MTR_7g012030 72.464 69 19 0 420 488 1 69 5.20e-28 112
MS.gene27335.t1 MTR_6g046330 77.193 57 13 0 432 488 3 59 4.88e-23 101
MS.gene27335.t1 MTR_6g038890 47.619 105 45 3 420 518 1 101 9.24e-22 95.1
MS.gene27335.t1 MTR_4g067160 26.462 359 207 15 422 745 793 1129 5.47e-18 89.7
MS.gene27335.t1 MTR_1g088900 42.157 102 34 3 471 572 95 171 1.14e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27335.t1 AT3G02760 52.104 808 316 16 3 757 6 795 0.0 706
MS.gene27335.t1 AT3G02760 52.104 808 316 16 3 757 6 795 0.0 706
MS.gene27335.t1 AT3G46100 29.412 340 213 9 409 740 72 392 1.31e-34 139
MS.gene27335.t1 AT3G59410 27.500 360 218 14 422 757 796 1136 4.62e-22 103
MS.gene27335.t1 AT3G59410 27.500 360 218 14 422 757 797 1137 6.70e-22 102
MS.gene27335.t1 AT3G59410 27.500 360 218 14 422 757 796 1136 7.05e-22 102
MS.gene27335.t1 AT3G59410 27.500 360 218 14 422 757 796 1136 7.05e-22 102
MS.gene27335.t1 AT3G59410 27.500 360 218 14 422 757 820 1160 9.20e-22 102
MS.gene27335.t1 AT5G03406 29.412 187 125 4 409 589 72 257 1.39e-17 84.0

Find 181 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATGCTCATGCATCTTTA+TGG 0.121581 1.2:-2614619 MS.gene27335:CDS
CAAATTTGATGTTTCAAATA+TGG 0.173180 1.2:-2614565 MS.gene27335:CDS
GAAGTGCTAGTGAGCATATT+AGG 0.179665 1.2:-2616155 MS.gene27335:CDS
TTCTTGTAAGGTTAGGAAAT+TGG 0.186135 1.2:+2621730 None:intergenic
GAGAGTATTTGCCATATTAA+TGG 0.210638 1.2:-2616557 MS.gene27335:CDS
TTCTGTAGACCTTAGCTATT+TGG 0.213723 1.2:+2619660 None:intergenic
ATATTTGAAGCTGTTCTTAA+AGG 0.233868 1.2:-2617442 MS.gene27335:CDS
GTCTTTGGCAATGTCGTTAA+AGG 0.237281 1.2:-2621162 MS.gene27335:CDS
ACTGGGTGTTTCTTCGGTTT+TGG 0.247599 1.2:-2621546 MS.gene27335:CDS
CATCAATTGACAGGGTTGTT+AGG 0.257926 1.2:-2621521 MS.gene27335:CDS
CTACCAACACTATGCGTTAC+TGG 0.260813 1.2:-2621564 MS.gene27335:CDS
AGTCTACGTAGTAATGTTAA+AGG 0.263710 1.2:+2617622 None:intergenic
TCTTGTAAGGTTAGGAAATT+GGG 0.273420 1.2:+2621731 None:intergenic
TCCGGCTGTTGGTTTGAGTC+TGG 0.287451 1.2:-2616587 MS.gene27335:CDS
AAGAGGAAGAAGGCTGGTTT+GGG 0.296266 1.2:-2620855 MS.gene27335:CDS
AACAGCCGGAACTTCCTTCT+TGG 0.296717 1.2:+2616600 None:intergenic
GGGGAGGGAAATAGTTTATC+AGG 0.302384 1.2:-2621345 MS.gene27335:intron
TATTTGAAGCTGTTCTTAAA+GGG 0.307450 1.2:-2617441 MS.gene27335:CDS
GGCAATGTCGTTAAAGGTAT+TGG 0.309334 1.2:-2621156 MS.gene27335:CDS
GAAGAGGAAGAAGGCTGGTT+TGG 0.323384 1.2:-2620856 MS.gene27335:CDS
GGACGATATGATAACTTGAT+AGG 0.327531 1.2:-2616649 MS.gene27335:CDS
GAAACTCTCATGGGAAAATA+TGG 0.327639 1.2:-2620024 MS.gene27335:CDS
CAACTTCCTCTTTAGAACTA+TGG 0.328050 1.2:+2621414 None:intergenic
GCTTTGATGATGATGTTGTT+AGG 0.328260 1.2:+2621768 None:intergenic
GTGTTGTGTGTTGTTGTCTT+TGG 0.328526 1.2:-2621177 MS.gene27335:CDS
AGGGGTCTTGATTATTATAC+TGG 0.328727 1.2:-2617469 MS.gene27335:CDS
CAATGTGACTTTGATATTGC+TGG 0.341855 1.2:-2619599 MS.gene27335:CDS
TCAATTGCAGTGCTCGCATT+TGG 0.342446 1.2:+2614407 None:intergenic
TAAAATTACCTTTGGAACCT+TGG 0.345191 1.2:+2620635 None:intergenic
AATAAAGAGAAACTTACTAT+TGG 0.345413 1.2:-2621212 MS.gene27335:CDS
TCGTCGCCATGATTTCTATT+CGG 0.347549 1.2:-2621087 MS.gene27335:CDS
CAATTGCAGTGCTCGCATTT+GGG 0.350939 1.2:+2614408 None:intergenic
GGGCTTTAAATAAAATTTCC+AGG 0.351718 1.2:+2617542 None:intergenic
ATTCTAACAACCTCAAAATC+TGG 0.356532 1.2:+2619557 None:intergenic
CGTCGCCATGATTTCTATTC+GGG 0.359923 1.2:-2621086 MS.gene27335:CDS
TGCGTTACTGGGTGTTTCTT+CGG 0.369422 1.2:-2621552 MS.gene27335:CDS
GCAATGTCGTTAAAGGTATT+GGG 0.370057 1.2:-2621155 MS.gene27335:CDS
GAAGGCTCTGGTTTCTTGTA+AGG 0.372675 1.2:+2621718 None:intergenic
AAAATTACCTTTGGAACCTT+GGG 0.372746 1.2:+2620636 None:intergenic
TGCTTGATGAGCTGAAGCTT+GGG 0.373232 1.2:-2619523 MS.gene27335:CDS
ATGTCCAACTGATGCTAGTT+TGG 0.373563 1.2:-2621039 MS.gene27335:CDS
ATCACATATGGTAGGGTACT+AGG 0.384174 1.2:+2614588 None:intergenic
GAGTACCTCCTGAAAAGTTT+AGG 0.386819 1.2:-2618724 MS.gene27335:CDS
CCGGCTGTTGGTTTGAGTCT+GGG 0.386821 1.2:-2616586 MS.gene27335:CDS
CTCTGGTTTCTTGTAAGGTT+AGG 0.387298 1.2:+2621723 None:intergenic
GTCGTTAAAGGTATTGGGTC+AGG 0.391885 1.2:-2621150 MS.gene27335:CDS
TTGGAACCTTGGGCTTTCTT+CGG 0.392592 1.2:+2620646 None:intergenic
AAGTGCTAGTGAGCATATTA+GGG 0.392762 1.2:-2616154 MS.gene27335:CDS
TCCGAGACAGCTGACAGAAT+TGG 0.393164 1.2:-2617670 MS.gene27335:CDS
GAAATCATGGCGACGATCAA+TGG 0.395346 1.2:+2621094 None:intergenic
GCTTAATGATTCTAAGTTTG+TGG 0.398316 1.2:-2621366 MS.gene27335:CDS
ATAAAGAGAAACTTACTATT+GGG 0.398802 1.2:-2621211 MS.gene27335:CDS
GATCGAAACGATTTCGATGT+TGG 0.412552 1.2:-2621611 MS.gene27335:CDS
GATCCTCGAATGCAATGATT+TGG 0.418831 1.2:+2621259 None:intergenic
CTTAATGATTCTAAGTTTGT+GGG 0.422461 1.2:-2621365 MS.gene27335:CDS
CGAACATATAAGAAAAGAAA+TGG 0.427037 1.2:-2618660 MS.gene27335:intron
CTTTGATGATGATGTTGTTA+GGG 0.427120 1.2:+2621769 None:intergenic
GGGACACATGATTATGCTAA+TGG 0.427745 1.2:-2620144 MS.gene27335:CDS
ATCAATTGACAGGGTTGTTA+GGG 0.428033 1.2:-2621520 MS.gene27335:CDS
AGTTTGCTCATGGGATGATA+AGG 0.433138 1.2:-2621289 MS.gene27335:CDS
CAGGCATGGCGCCACAGCCT+TGG 0.433147 1.2:-2620070 MS.gene27335:CDS
GACTCGGTGGAATACTTTGT+TGG 0.435912 1.2:+2614516 None:intergenic
GCAGGATCACTTGCGGCATC+CGG 0.436000 1.2:+2614663 None:intergenic
AATGGAACAAAATCAAAATC+AGG 0.436145 1.2:-2616539 MS.gene27335:intron
TGGTTCCAAGAAGGAAGTTC+CGG 0.436933 1.2:-2616605 MS.gene27335:CDS
GCTCACTAGCACTTCTGTCT+TGG 0.439541 1.2:+2616163 None:intergenic
ACATCAAATTTGATCACATA+TGG 0.443029 1.2:+2614576 None:intergenic
GATCCGAGTTGAGTTGAATT+CGG 0.445252 1.2:-2621240 MS.gene27335:CDS
ATGAATTTAATGAGCTTCTC+CGG 0.448733 1.2:-2614682 MS.gene27335:intron
TCCAATTCTGTCAGCTGTCT+CGG 0.449208 1.2:+2617669 None:intergenic
GGCGGTGGCGATGGCGTAAA+CGG 0.449231 1.2:+2621835 None:intergenic
ACCCTTGCCGCCAAGTGTTA+CGG 0.450135 1.2:+2621877 None:intergenic
TTTAGATTGGGCGGTGGCGA+TGG 0.451337 1.2:+2621826 None:intergenic
ATGATGTTGTTAGGGATAAT+CGG 0.451698 1.2:+2621777 None:intergenic
TGATTCTAAGTTTGTGGGGA+GGG 0.456835 1.2:-2621360 MS.gene27335:CDS
GATAACTTGATAGGGATGTT+TGG 0.460699 1.2:-2616640 MS.gene27335:CDS
TTGCTTGATGAGCTGAAGCT+TGG 0.463351 1.2:-2619524 MS.gene27335:CDS
CGCCGTAACACTTGGCGGCA+AGG 0.467663 1.2:-2621879 MS.gene27335:CDS
ATTCGCAGATATTGAAGACT+TGG 0.467859 1.2:-2620761 MS.gene27335:CDS
GCCGTAACACTTGGCGGCAA+GGG 0.476345 1.2:-2621878 MS.gene27335:CDS
CTCAACAAACTCCTCCTCTT+CGG 0.480139 1.2:-2621683 MS.gene27335:CDS
GAAACTTACTAGTTTGCTCA+TGG 0.484472 1.2:-2621299 MS.gene27335:intron
ACTTGACAGTTCCGTTTGCT+AGG 0.486436 1.2:-2619721 MS.gene27335:CDS
GTTTCTCGCAATTCAAAGAC+AGG 0.488950 1.2:+2620042 None:intergenic
AGTCACATTGATAAAATTCA+CGG 0.490294 1.2:+2619612 None:intergenic
TGAATCAAAACGCCTTGATA+AGG 0.496829 1.2:-2617515 MS.gene27335:CDS
AAGAAGGCTGGTTTGGGGAA+AGG 0.496855 1.2:-2620849 MS.gene27335:CDS
GCCGCCAAGTGTTACGGCGG+AGG 0.496894 1.2:+2621883 None:intergenic
GGCGTTAAAGGCTGATGTTA+CGG 0.497246 1.2:-2621465 MS.gene27335:CDS
GAGGAGTTTGTTGAGAAGAA+CGG 0.497407 1.2:+2621691 None:intergenic
GTTGAGAAGAACGGTTAAGA+AGG 0.499310 1.2:+2621700 None:intergenic
TACCAACACTATGCGTTACT+GGG 0.503163 1.2:-2621563 MS.gene27335:CDS
GTCTACGTAGTAATGTTAAA+GGG 0.503254 1.2:+2617623 None:intergenic
CAAATTTGATCACATATGGT+AGG 0.504518 1.2:+2614580 None:intergenic
TCTCTTCGATGTCTTTAAGA+AGG 0.506720 1.2:-2621063 MS.gene27335:CDS
CTTCTTCGTTTCATTCAACT+CGG 0.510499 1.2:+2620875 None:intergenic
ATGCCAAATCATTGCATTCG+AGG 0.510871 1.2:-2621262 MS.gene27335:CDS
GTTGTTAGGGTTTGCTGACG+TGG 0.520717 1.2:-2621507 MS.gene27335:CDS
GTTTGCTCATGGGATGATAA+GGG 0.520933 1.2:-2621288 MS.gene27335:CDS
ACTAGCACTTCTGTCTTGGT+TGG 0.529009 1.2:+2616167 None:intergenic
TCCTCCGCCGTAACACTTGG+CGG 0.529260 1.2:-2621884 MS.gene27335:CDS
AAGAAGGAAGTTCCGGCTGT+TGG 0.532514 1.2:-2616598 MS.gene27335:CDS
AGTGCTTTCTTAGAAAATGC+TGG 0.533444 1.2:-2617586 MS.gene27335:CDS
CGCATAGTGTTGGTAGTGAT+CGG 0.535164 1.2:+2621571 None:intergenic
GACGATATGATAACTTGATA+GGG 0.536417 1.2:-2616648 MS.gene27335:CDS
TAAAAGGTACCAAATAGCTA+AGG 0.537218 1.2:-2619669 MS.gene27335:CDS
ATCAAAACGCCTTGATAAGG+TGG 0.538247 1.2:-2617512 MS.gene27335:CDS
AGGGATGTTTGGTGTAAAGA+AGG 0.542043 1.2:-2616629 MS.gene27335:CDS
ATGTTTGGTGTAAAGAAGGA+TGG 0.543864 1.2:-2616625 MS.gene27335:CDS
GACTGCTTATGTTGCACTTG+AGG 0.544253 1.2:-2620901 MS.gene27335:CDS
ATGTCCTCCGCCGTAACACT+TGG 0.548755 1.2:-2621887 MS.gene27335:CDS
AGAGACCCGAATAGAAATCA+TGG 0.549974 1.2:+2621081 None:intergenic
ATTGAAAGTAAAAGATCTCG+TGG 0.550881 1.2:-2620682 MS.gene27335:CDS
AGGGTTTGCTGACGTGGCCG+CGG 0.551260 1.2:-2621501 MS.gene27335:CDS
AAGGTTGGTTCAATTGCTGC+TGG 0.552287 1.2:-2616673 MS.gene27335:CDS
TGAATTGCGAGAAACTCTCA+TGG 0.552612 1.2:-2620034 MS.gene27335:CDS
TAAGGTTAGGAAATTGGGGA+TGG 0.552746 1.2:+2621736 None:intergenic
TGAGTGCGGATGAATCGATT+CGG 0.553690 1.2:+2621801 None:intergenic
GTAGCTACAAACCTAGCAAA+CGG 0.554905 1.2:+2619710 None:intergenic
CTTGTAAGGTTAGGAAATTG+GGG 0.555254 1.2:+2621732 None:intergenic
GGCAGGAGTTGCAGATGACT+CGG 0.556733 1.2:+2614500 None:intergenic
CATAGTTCTAAAGAGGAAGT+TGG 0.560501 1.2:-2621413 MS.gene27335:CDS
TTGATGATCCTCCTCGAGAG+TGG 0.560506 1.2:+2614439 None:intergenic
AGAAGGGACAACGTATCTAA+AGG 0.562467 1.2:-2619641 MS.gene27335:CDS
TTAACCAAACTAGCATCAGT+TGG 0.563715 1.2:+2621035 None:intergenic
AAGAACGGTTAAGAAGGCTC+TGG 0.567967 1.2:+2621706 None:intergenic
CCCAGACTCAAACCAACAGC+CGG 0.569889 1.2:+2616586 None:intergenic
AATTTGATGAATTCTGGTGA+TGG 0.570421 1.2:-2621437 MS.gene27335:CDS
TCACATATGGTAGGGTACTA+GGG 0.571111 1.2:+2614589 None:intergenic
GACAGGTGTATCCAAGGCTG+TGG 0.572000 1.2:+2620059 None:intergenic
TTCGCAGATATTGAAGACTT+GGG 0.574189 1.2:-2620760 MS.gene27335:CDS
TTGGTGTTGCTGCTTCTATG+AGG 0.579684 1.2:-2621394 MS.gene27335:CDS
CAAGGACAATTGTATCAGCA+TGG 0.579718 1.2:+2614478 None:intergenic
AAATTTGATCACATATGGTA+GGG 0.580835 1.2:+2614581 None:intergenic
TTCGCTTGTGTGGAAAATTG+TGG 0.581114 1.2:-2620937 MS.gene27335:CDS
ACGAAGAAGAGGAAGAAGGC+TGG 0.582892 1.2:-2620861 MS.gene27335:CDS
ACAATTGTATCAGCATGGGC+AGG 0.585153 1.2:+2614483 None:intergenic
TTTGAAGCTGTTCTTAAAGG+GGG 0.586992 1.2:-2617439 MS.gene27335:CDS
TGATGGCCATAGTTCTAAAG+AGG 0.587996 1.2:-2621420 MS.gene27335:CDS
TTCAAAGACAGGTGTATCCA+AGG 0.588118 1.2:+2620053 None:intergenic
AAATAGCTAAGGTCTACAGA+AGG 0.596075 1.2:-2619658 MS.gene27335:CDS
GCTTGATGAGCTGAAGCTTG+GGG 0.597163 1.2:-2619522 MS.gene27335:CDS
GTTGGTTCAATTGCTGCTGG+TGG 0.597616 1.2:-2616670 MS.gene27335:CDS
CCGGTGGGTATTTACCGAAG+AGG 0.599828 1.2:+2621669 None:intergenic
ATTTGAAGCTGTTCTTAAAG+GGG 0.600341 1.2:-2617440 MS.gene27335:CDS
ATGATTCTAAGTTTGTGGGG+AGG 0.601337 1.2:-2621361 MS.gene27335:CDS
TTAATGATTCTAAGTTTGTG+GGG 0.601782 1.2:-2621364 MS.gene27335:CDS
CTACGTAGACTTAAACAAGA+AGG 0.602810 1.2:-2617610 MS.gene27335:CDS
TGAAACGAAGAAGAGGAAGA+AGG 0.607333 1.2:-2620865 MS.gene27335:CDS
CCTCTTCGGTAAATACCCAC+CGG 0.609933 1.2:-2621669 MS.gene27335:CDS
TCGTTAAAGGTATTGGGTCA+GGG 0.611379 1.2:-2621149 MS.gene27335:CDS
AGTTGAATGAAACGAAGAAG+AGG 0.611910 1.2:-2620872 MS.gene27335:CDS
AAGGACAATTGTATCAGCAT+GGG 0.613728 1.2:+2614479 None:intergenic
AAGAAAGCCCAAGGTTCCAA+AGG 0.614334 1.2:-2620643 MS.gene27335:intron
TTGTGTGGAAAATTGTGGCA+TGG 0.614665 1.2:-2620932 MS.gene27335:CDS
GAATTGCGAGAAACTCTCAT+GGG 0.614984 1.2:-2620033 MS.gene27335:CDS
AGTATAATAATCAAGACCCC+TGG 0.615200 1.2:+2617471 None:intergenic
AAACTTACTAGTTTGCTCAT+GGG 0.618578 1.2:-2621298 MS.gene27335:intron
AATCATAGAAAGTTACTCGA+TGG 0.621157 1.2:-2618764 MS.gene27335:CDS
TGTGTGGAAAATTGTGGCAT+GGG 0.623082 1.2:-2620931 MS.gene27335:CDS
GGTTTAGATTAAGAGATGCA+AGG 0.624270 1.2:+2614460 None:intergenic
TGTTGATGCATTGAATGACC+TGG 0.626342 1.2:-2617560 MS.gene27335:CDS
AAAGAAGGATGGTTCCAAGA+AGG 0.627412 1.2:-2616614 MS.gene27335:CDS
TTTGACTTGAGTCTTGCCAG+GGG 0.628193 1.2:-2617487 MS.gene27335:CDS
TTAGGGAGTGACGTAGCTGT+AGG 0.632112 1.2:-2616137 MS.gene27335:intron
GATCCGAATTCAACTCAACT+CGG 0.637766 1.2:+2621237 None:intergenic
GTGGGTATTTACCGAAGAGG+AGG 0.637998 1.2:+2621672 None:intergenic
CACCCAGTAACGCATAGTGT+TGG 0.645588 1.2:+2621561 None:intergenic
GGTGGCGATGGCGTAAACGG+TGG 0.647056 1.2:+2621838 None:intergenic
GATGGCATGATGCAAATATG+TGG 0.647880 1.2:-2618746 MS.gene27335:CDS
AATAGCTAAGGTCTACAGAA+GGG 0.648786 1.2:-2619657 MS.gene27335:CDS
TAGGGATAATCGGTTGAGTG+CGG 0.649309 1.2:+2621787 None:intergenic
TGAAAGCCGAAGAAAGCCCA+AGG 0.653146 1.2:-2620652 MS.gene27335:CDS
GCAGATATTGAAGACTTGGG+TGG 0.657029 1.2:-2620757 MS.gene27335:CDS
AGAGGAAGAAGGCTGGTTTG+GGG 0.659481 1.2:-2620854 MS.gene27335:CDS
GACAACAACACACAACACAT+AGG 0.667110 1.2:+2621182 None:intergenic
AATCTAAACCACTCTCGAGG+AGG 0.675054 1.2:-2614447 MS.gene27335:CDS
CTTAATCTAAACCACTCTCG+AGG 0.677822 1.2:-2614450 MS.gene27335:CDS
CTTGCCGCCAAGTGTTACGG+CGG 0.696144 1.2:+2621880 None:intergenic
CATATGGTAGGGTACTAGGG+TGG 0.731294 1.2:+2614592 None:intergenic
AGGAGTTGCAGATGACTCGG+TGG 0.767403 1.2:+2614503 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.2 gene 2614407 2621909 2614407 ID=MS.gene27335
chr1.2 mRNA 2614407 2621909 2614407 ID=MS.gene27335.t1;Parent=MS.gene27335
chr1.2 exon 2621346 2621909 2621346 ID=MS.gene27335.t1.exon1;Parent=MS.gene27335.t1
chr1.2 CDS 2621346 2621909 2621346 ID=cds.MS.gene27335.t1;Parent=MS.gene27335.t1
chr1.2 exon 2620644 2621309 2620644 ID=MS.gene27335.t1.exon2;Parent=MS.gene27335.t1
chr1.2 CDS 2620644 2621309 2620644 ID=cds.MS.gene27335.t1;Parent=MS.gene27335.t1
chr1.2 exon 2619987 2620166 2619987 ID=MS.gene27335.t1.exon3;Parent=MS.gene27335.t1
chr1.2 CDS 2619987 2620166 2619987 ID=cds.MS.gene27335.t1;Parent=MS.gene27335.t1
chr1.2 exon 2619514 2619771 2619514 ID=MS.gene27335.t1.exon4;Parent=MS.gene27335.t1
chr1.2 CDS 2619514 2619771 2619514 ID=cds.MS.gene27335.t1;Parent=MS.gene27335.t1
chr1.2 exon 2618661 2618795 2618661 ID=MS.gene27335.t1.exon5;Parent=MS.gene27335.t1
chr1.2 CDS 2618661 2618795 2618661 ID=cds.MS.gene27335.t1;Parent=MS.gene27335.t1
chr1.2 exon 2617432 2617704 2617432 ID=MS.gene27335.t1.exon6;Parent=MS.gene27335.t1
chr1.2 CDS 2617432 2617704 2617432 ID=cds.MS.gene27335.t1;Parent=MS.gene27335.t1
chr1.2 exon 2616540 2616692 2616540 ID=MS.gene27335.t1.exon7;Parent=MS.gene27335.t1
chr1.2 CDS 2616540 2616692 2616540 ID=cds.MS.gene27335.t1;Parent=MS.gene27335.t1
chr1.2 exon 2616138 2616198 2616138 ID=MS.gene27335.t1.exon8;Parent=MS.gene27335.t1
chr1.2 CDS 2616138 2616198 2616138 ID=cds.MS.gene27335.t1;Parent=MS.gene27335.t1
chr1.2 exon 2614407 2614690 2614407 ID=MS.gene27335.t1.exon9;Parent=MS.gene27335.t1
chr1.2 CDS 2614407 2614690 2614407 ID=cds.MS.gene27335.t1;Parent=MS.gene27335.t1
Gene Sequence

>MS.gene27335

ATGTCCTCCGCCGTAACACTTGGCGGCAAGGGTTCGTCTCTCTCTTCGTCCACCGTTTACGCCATCGCCACCGCCCAATCTAAAATCCGAATCGATTCATCCGCACTCAACCGATTATCCCTAACAACATCATCATCAAAGCAAAAAATCACCATCCCCAATTTCCTAACCTTACAAGAAACCAGAGCCTTCTTAACCGTTCTTCTCAACAAACTCCTCCTCTTCGGTAAATACCCACCGGAAAACGTTCAAAGTATTTTAGAATCACTCAATTGTGATCGAAACGATTTCGATGTTGGAGACAAATTTGATATTACCGATCACTACCAACACTATGCGTTACTGGGTGTTTCTTCGGTTTTGGATCATCAATTGACAGGGTTGTTAGGGTTTGCTGACGTGGCCGCGGCTTTTTCTTGTGAGGCGTTAAAGGCTGATGTTACGGTTTTCAATTTGATGAATTCTGGTGATGGCCATAGTTCTAAAGAGGAAGTTGGTGTTGCTGCTTCTATGAGGACTTTGCTTAATGATTCTAAGTTTGTGGGGAGGGAAATAGTTTATCAGGTTTGTAACATTGTTAATAAAGGAGAAACTTACTAGTTTGCTCATGGGATGATAAGGGAGAATGCCAAATCATTGCATTCGAGGATCCGAGTTGAGTTGAATTCGGATCATAATAAAGAGAAACTTACTATTGGGAGTGAGCCTATGTGTTGTGTGTTGTTGTCTTTGGCAATGTCGTTAAAGGTATTGGGTCAGGGTAGTTTAGCTCGTGCAAATTGTAATTTGTCGTCCATTGATCGTCGCCATGATTTCTATTCGGGTCTCTTCGATGTCTTTAAGAAGGAATGTCCAACTGATGCTAGTTTGGTTAATAATTTTAACGAATCTTTTAAGTTGTATTCCGGTGGGGTGTATGAAAAATTTGCACATGAAATCAATGTCCTTTTTTCGCTTGTGTGGAAAATTGTGGCATGGGAACTTGCGACTGCTTATGTTGCACTTGAGGCTGCCGAGTTGAATGAAACGAAGAAGAGGAAGAAGGCTGGTTTGGGGAAAGGAACTAGTTTGATTTTCGCTTGGATTAAGGAAAGGTTGCAGAGTGAAGAAAAGAGTGATGTAGATAATTCGCAGATATTGAAGACTTGGGTGGCTGATTTTCTATCGTTTTTGGATTTGGCTAAACCTGAATTCAATACATTTTTATTGAAAGTAAAAGATCTCGTGGAAAGCAATGAAAGCCGAAGAAAGCCCAAGGTTCCAAAGGTAATTTTATTTGATTCTGATTAACCGAGTTACTTAGGCTGTCTTGGCCCTTGGGCATGTTATAGTTCTATTAACTTTATCACTTTTTCGTAAGCAATTAGAAACCATGTTTGGACATTTTAATTGATGATATATCTATCCAATGTGTTAAAATTAAGAATCTTTAGATATTCCTTTAATTGTACAACTTCCTAAATTGATTGTTATTACTCCTAGAGTATTCAACTTCCTAGGCTAGTGCTTACTAAATAAGCATATGTTTTTATTGTAAAGCCATTATGAATACAAGGTGTGTGATCTCATTATAGACACACAGAGAGTTTACTCAGACTTCACATATTTTTACACAATGCATTTGAGCACTGTTAGGAGCATTCTAAAATCATTCATCAAAAGGGCTGATTATTTATTTATACAGTTGTTGTGCATCCTTGTACTGATCTATGAGATCTTTATTTTTATTTTTTTTTAAATCAGGGGACACATGATTATGCTAATGGAGAAATGATAATTAGAAATAAAGCTCTTTCATTAATAAAAGAAGTTTTTGACAGGCATGGCGCCACAGCCTTGGATACACCTGTCTTTGAATTGCGAGAAACTCTCATGGGAAAATATGGAGAAGACTCAAAGTTGATTTTTGATCTTGCTGATCAGGTATATATGATTATTGCCTGTTCACTTCTTGACAAGTTGAGTTTATTTTATGACAGCTTTCCCTTTTCTCCGGATAAAAATATCTAGGAAAAAAAACAAACAAACTTAAAGCATTCACAATAGTGAACAAATTTGTATATTCTTACTCTCTAGAATTTTTTCTTTCGATATTTTTTATCACTTTCATGCTAACCTGTAATCAACTTGTTTGACAGGGCGGGGAGCTCTGTTCTTTAAGATATGACTTGACAGTTCCGTTTGCTAGGTTTGTAGCTACGAATAATTTGACATCTTTTAAAAGGTACCAAATAGCTAAGGTCTACAGAAGGGACAACGTATCTAAAGGTAGACTCCGTGAATTTTATCAATGTGACTTTGATATTGCTGGTCCAGCTGAAAAAATGGCTCCAGATTTTGAGGTTGTTAGAATTTTGTCTGAATTGCTTGATGAGCTGAAGCTTGGGGATTTTGAGGTAAATTTTTTTAACTTCCCTTCCCTGCTATAAAATTTATTGGTTTTCTGAATTTGTAGAACTACTTACACTGTTTACTGAGTTCATGATTTGATATTCTAAAACCATAATTTTTTATGGTCTGGCTATACATAATTTGGTGAGCGGTTATTGATATAGCACAATATTAGAATATGTATTATTACTATATCTGTTGGGCATGGGCTTATAAGTTTCATTATTTATTTTGAAGTACAATCATCTTTGTTGCCATCAGACTACCTGCTGCTGGTTGATGAGTTTTTGCAATGTTGCGCTAAATCTGAGTGATTTTAATCAACCTGATGCATGTGTTGTAGTTTAAACTTGTTATCAAGTCTTTGTTATGTCAATTATCAGATTACCTTCTTGCTGATGTGATCTTTGCAATGATCTTTTGAAATGCGACTCCCAACTTATTTGCTATCATTTAACCTTATAATATCATTCATTTGGATGTGTCTGGTGATTGAGTTTTACAGGAATCAATGATCTTTGTTAAATGTGACGAGTTTACTCATCCCAGTTTATTTCTATAATTTAACTTTATAATAATAATATCATTCGTCTGAATGTGTTTGGTGATCGACGTATTCCAACCTGGTGGTTAAATTTTGTACTCAATAATGTCTTCAAATTATATCATACGCGCGTTTCCTTATGATCTTTCTGTTGTATTTGTTATTTTTTGGTTTCACAGATAAAGCTGAATCATAGAAAGTTACTCGATGGCATGATGCAAATATGTGGAGTACCTCCTGAAAAGTTTAGGACTATATGTTCATGTATTGACAAGTTAGACAAACAATCATTCGAACATATAAGAAAAGAAATGGTGAGGACTGAGGACATATGTTGTTCGTTTCTGTTACCTTTATACTTATATTTTATTATGATTGAGCATACCACTTCTGTTGTGCTTAAACTGTTCCTTGTGTTGCACATTTTGAAAGATGTATGCTTTTATTTTATACTTACCTTATAGTTTATGCTTTATCAATGGGAAATAGTTTGGTTTAGGGATGGAATACAAGTTTTGCACCTTTGCATTCTTTTGGTAAACACTGTTGCATGATTTATTAAGGATGCAAACTCCTTTGTCACTAGTTACTCACTGCACAGAAACATTTTCTATTGTTGTTTCTTCATTTATGAGCAATATCTGGATTGCATTATTTTGTATTTTGCATCCATTTTCTATTCTTGCCGACCCCACTTAGTGGGATACGGCTTGGTGGTTGTTGTTGTTGTATCCATTTTCTATTCTTCTGTTACTGGTAAACTCAATGGTTTCAAATGTTGGACTCGACTAGATGAAAAAGGATTCATTGAATGCATTAGACTGAGTGTTTATCTTTCAAAACTAGAATTACTGTTTTAACTTATTTTGAAATATATAGCAACACTTTATTTTACTTGGAGGGTGATGAATGACATAAATACTCGTGATCTCATCCGAGGGTAACTTACATTTATCAATCAATATCTGTGGACCGAGTTGAACAAATAGTGTCTGAGTAATTTAAATCTTTTTTCTTTTTCCATAAATAAAAAAATAGTTGCATTTATAATTTAAATGTCCCTAGAGCTATGCAAGTATAATGCAGTAGATTGTCTTAGGATTTTGACACATACTTTAGTTGTTGCCTTTTAAAATATGTCTGATCATAGTTCTTTGGAACATTAATATTTGCTCTGAACTGCTAATATCAGGAAGCTATTTTTTGTAATGCCATGATTTCTTATGTTTACTAATTTGGTTTGTACTGCCTTCCATGCTGTAGGTGGAAGAGAGGATTAACTTCCGAGACAGCTGACAGAATTGGAACTTTTATTAATGAAAAAGGACACCCTTTAACATTACTACGTAGACTTAAACAAGAAGGCAGTGCTTTCTTAGAAAATGCTGGATCTGTTGATGCATTGAATGACCTGGAAATTTTATTTAAAGCCCTGGATGAATCAAAACGCCTTGATAAGGTGGTTTTTGACTTGAGTCTTGCCAGGGGTCTTGATTATTATACTGGAGTTATATTTGAAGCTGTTCTTAAAGGGGGTGCTCAGGTAATTCTCGTGTCTTTTATCTTCTCTCCATCCTGAAATGTTTCTTCTTTAGTTCCCTCTTTTTTTGAGGAGCACAATGCATTATGTCAGCTTAGATATAGTGGATGTTCACTGTCTTGTACACAACTCTAGATACAACAAGCTAAACCCATTTTCACAAGTTGTTTTAATGCATGCTAGTCTAAACACAAGATGTAATGAAGGATTAACAGTTCTTTTCTGGGTTAAACAAATGGAAGGTTCAAAAGAGATGGATTAAATTAATTGAAAGATCATTTTAATTTTTATGATTAAAATTTAAGTCTAAGTCATATCAGAAAACAGAATACTTTAGATTTTTTAGGTAGAGAAGTTAACTTCAGGGGAGAAGAATTTTATATGAATGATTGTGGATTGAGACATTGTTGATGGTTTGAGTAGAAAAGTTTAATAGGAGGTAAGAGAATGAAATTTAAAGTCCAATTTGTAGAAAAAGTTAGCGATCAACACTAATGTTAACTTGGAATAGTAGATTGAGATTGGTCTCAACACAATTTTCTCATCATTTTCCTTGAATTATTCTTATTCAGAAAGCATATGGATTGTATATAAATAAGTAAATTGAAATCCTTGGTTCTTAAGAGTGTATTATGATAGTCATGTATTTGCATTGCATATGCTCTCCTTTGTTTGTTTCATTTACAGTTTTTATTGAAATCTTCTGCTTCTATTTAGCAATGGATTTATGGTTTTTATAAAGGTTGGTTCAATTGCTGCTGGTGGACGATATGATAACTTGATAGGGATGTTTGGTGTAAAGAAGGATGGTTCCAAGAAGGAAGTTCCGGCTGTTGGTTTGAGTCTGGGAATCGAGAGAGTATTTGCCATATTAATGGAACAAAATCAAAATCAGGTGATCATAATGCTTGATATTTAACTTTTGTAGTTTTCCGTGTTAAAAAAGAAATATTTCTTATTATTCTGGGTATCAAATGCTATTAACATCTAAAGTATTTTCTAATCATAGTCGTCATTGTAAAATTGTCACTAATTATTTCCTAAACCATAGCTGCCATCAGACAGATACTCCTACACCTACAGTTTCTTATGATGTGTGGTTGATGACTTGATTTCACCACTTCTAGGGCACATCTATTTACTAGGATGTTTACAGTTGACCTTTATCTATTTTTTGTTGCTTTTTTGGTGTGGATATGATGATGAGAATGATCTTAACTGTTTCCTTTTGTTTAGATGGCTCGACCAACCAAGACAGAAGTGCTAGTGAGCATATTAGGGAGTGACGTAGCTGTAGGTGCAAAGCTGGTTGGTGAACTGTGGGATGCTCGGGTGAAAGCAGAATTCTTGGTCCATCCTGGAAGATCTAAGCACTTTGACTACTACAACAACAACAACAACAACAACAACGCCTTATCCCACTAAGTGGGGTCGGCTACATGGATCAAATGCCGCCATAATGTTCTATCAAAGACCATATTTGGATCCAACTCATTGACCTCTAAATCTTTTCTAATGGTTTCTCTAATAGTTTTCTTAGGTCTTCCTCTACCTCTTTTAACCTGACTCTCCGCCATTTGATTTACTCTTCTTACCACGGCGTCTACGGGCCTTCTCTCTACATGTCCAAACCATCTAAGCCTATTTTCTACCAACTTTTCTACTATAGGTGCTACCCCCACTCTCTCTCTAATGATGTCATTCCTAATCCTATCATGTCTAGTCTTACCACTCATCCAACGCAACATCCTCATCTCCGATACGCTTACTTTACTCTCGTGTTGGCTCTTAATCGCCCAACACTCCGTACCATACAACATTGCCGGTCTGACTGCTGTCCGATAGAACTTTCCTTTCAGCTTAAGTGGTACTTTCTTATCGCACAAAACACCTGAGGCTCTTCTCCATTTCAACCACCCAGCTTGAATACGATGATGTACATCAGCTTCTATTTCTCCGTCATTTTGTACTACGGACCCAAGATATCTAAACCGTGTAACTTGGGGTATGATATGATCTCCAACTTTCACCTCTAAGGTAGACCCACTTCTCCTTTTACTGAAGTTACATTCCATATATTCCGTCTTGTTTCTACTCAGGCGGAAACCGTACGCTTCTAAGGCTTGCCTCCAAGTATCTAAGCACTTTGACTATGCAAAAAAAAATAGGATCCCTTGGATAATAGTTGTTGGCGAACAAGAAATAAAAGAAGGCACGGTGCAACTGAAAAGCATGGAGACGGGTAATGATGTAAACATAAACATCCCTAGAGAAAATTTTGTCGAGGAGCTTCAGAAACGGTTAAACTCGTTATAGTCCCATCATTTGTAGTACTTTAGAATTGAAACAGAAATTGATTTGTTAATATTTGGGTAGTTTCTTAAAAACTAATTAAAAATGAAATTCAAGTTTTGTTGATTTGATTGAAAATTAAAGAGAAATACATGATAATATACATTATCATATAAAGTGATCAAAATAACAAGCATCTAGATTTTGGTGCTAATCTTGAGATCTTAAGTTCAAACCTCGTTGTCTCCGGTATGAACCAAAAGTGATAAAAATAAGATAACATAAAACTGAAATTGAGTGGTGAGTAACCACATGCTTTGAATAATAAATGAATAGATAGGAAAAAAAAATACCCCTGAAATTGTAAATTCTTGCACCTCTGAAAGACGATATATGGCTCTATCTCTACATATATTGGTAATTCTCACGATGCACTTCATGAATTTAATGAGCTTCTCCGGATGCCGCAAGTGATCCTGCTGAAAACAATGCAGCACGTTCTTCATGCTCATGCATCTTTATGGCTTACCACCCTAGTACCCTACCATATGTGATCAAATTTGATGTTTCAAATATGGATATTTCCACTTATGTCCTTCAAAAGCCAACAAAGTATTCCACCGAGTCATCTGCAACTCCTGCCCATGCTGATACAATTGTCCTTGCATCTCTTAATCTAAACCACTCTCGAGGAGGATCATCAAAGTCTAATCCCAAATGCGAGCACTGCAATTGA
Protein sequence

>MS.gene27335.t1

MSSAVTLGGKGSSLSSSTVYAIATAQSKIRIDSSALNRLSLTTSSSKQKITIPNFLTLQETRAFLTVLLNKLLLFGKYPPENVQSILESLNCDRNDFDVGDKFDITDHYQHYALLGVSSVLDHQLTGLLGFADVAAAFSCEALKADVTVFNLMNSGDGHSSKEEVGVAASMRTLLNDSKFVGREIVYQFAHGMIRENAKSLHSRIRVELNSDHNKEKLTIGSEPMCCVLLSLAMSLKVLGQGSLARANCNLSSIDRRHDFYSGLFDVFKKECPTDASLVNNFNESFKLYSGGVYEKFAHEINVLFSLVWKIVAWELATAYVALEAAELNETKKRKKAGLGKGTSLIFAWIKERLQSEEKSDVDNSQILKTWVADFLSFLDLAKPEFNTFLLKVKDLVESNESRRKPKVPKGTHDYANGEMIIRNKALSLIKEVFDRHGATALDTPVFELRETLMGKYGEDSKLIFDLADQGGELCSLRYDLTVPFARFVATNNLTSFKRYQIAKVYRRDNVSKGRLREFYQCDFDIAGPAEKMAPDFEVVRILSELLDELKLGDFEIKLNHRKLLDGMMQICGVPPEKFRTICSCIDKLDKQSFEHIRKEMRGLTSETADRIGTFINEKGHPLTLLRRLKQEGSAFLENAGSVDALNDLEILFKALDESKRLDKVVFDLSLARGLDYYTGVIFEAVLKGGAQVGSIAAGGRYDNLIGMFGVKKDGSKKEVPAVGLSLGIERVFAILMEQNQNQMARPTKTEVLVSILGSDVAVASPDAASDPAENNAARSSCSCIFMAYHPSTLPYVIKFDVSNMDISTYVLQKPTKYSTESSATPAHADTIVLASLNLNHSRGGSSKSNPKCEHCN