Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027585.t1 | XP_003613276.1 | 97.3 | 714 | 16 | 1 | 1 | 714 | 1 | 711 | 0.00E+00 | 1424.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027585.t1 | O04630 | 73.9 | 706 | 177 | 1 | 8 | 713 | 10 | 708 | 0.0e+00 | 1088.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027585.t1 | G7K2Q8 | 97.3 | 714 | 16 | 1 | 1 | 714 | 1 | 711 | 0.0e+00 | 1424.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene027585 | MS.gene44095 | PPI |
| MS.gene027585 | MS.gene034805 | PPI |
| MS.gene027585 | MS.gene056036 | PPI |
| MS.gene027585 | MS.gene014350 | PPI |
| MS.gene027585 | MS.gene77474 | PPI |
| MS.gene027585 | MS.gene26939 | PPI |
| MS.gene027585 | MS.gene064832 | PPI |
| MS.gene027585 | MS.gene69330 | PPI |
| MS.gene027585 | MS.gene055573 | PPI |
| MS.gene027585 | MS.gene005227 | PPI |
| MS.gene027585 | MS.gene52774 | PPI |
| MS.gene027585 | MS.gene27335 | PPI |
| MS.gene027585 | MS.gene41088 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027585.t1 | MTR_5g034820 | 97.339 | 714 | 16 | 1 | 1 | 714 | 1 | 711 | 0.0 | 1449 |
| MS.gene027585.t1 | MTR_3g083180 | 39.646 | 565 | 325 | 12 | 152 | 707 | 86 | 643 | 2.32e-135 | 414 |
| MS.gene027585.t1 | MTR_3g077340 | 69.406 | 219 | 51 | 2 | 153 | 371 | 35 | 237 | 1.69e-98 | 303 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027585.t1 | AT5G26830 | 75.700 | 679 | 165 | 0 | 35 | 713 | 30 | 708 | 0.0 | 1092 |
| MS.gene027585.t1 | AT2G04842 | 38.772 | 570 | 333 | 13 | 152 | 712 | 84 | 646 | 5.90e-133 | 407 |
| MS.gene027585.t1 | AT2G04842 | 38.772 | 570 | 333 | 13 | 152 | 712 | 84 | 646 | 5.90e-133 | 407 |
| MS.gene027585.t1 | AT1G17960 | 64.236 | 288 | 98 | 2 | 424 | 707 | 92 | 378 | 1.61e-130 | 392 |
| MS.gene027585.t1 | AT1G17960 | 62.637 | 91 | 33 | 1 | 43 | 132 | 6 | 96 | 5.46e-29 | 120 |
| MS.gene027585.t1 | AT1G17960 | 64.437 | 284 | 96 | 2 | 428 | 707 | 169 | 451 | 8.78e-128 | 387 |
| MS.gene027585.t1 | AT1G17960 | 63.743 | 171 | 60 | 2 | 43 | 211 | 6 | 176 | 6.68e-68 | 231 |
| MS.gene027585.t1 | AT1G18130 | 67.123 | 146 | 44 | 1 | 562 | 707 | 17 | 158 | 1.58e-62 | 206 |
Find 183 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTTATTTCAGGAATATT+TGG | 0.091414 | 5.1:+25704834 | MS.gene027585:intron |
| CATAACAGGTCTCTCAATTT+TGG | 0.134497 | 5.1:-25708412 | None:intergenic |
| GAAAGTTTACAAAGAGTTTA+TGG | 0.138256 | 5.1:+25703453 | MS.gene027585:CDS |
| GATCATGTCTATAAAATATT+TGG | 0.175700 | 5.1:+25707026 | MS.gene027585:CDS |
| GCTCTTATTGCTAAGGTTAA+TGG | 0.194013 | 5.1:+25700494 | MS.gene027585:CDS |
| TCCTGACAATAAGAGTTTAA+AGG | 0.208364 | 5.1:+25703485 | MS.gene027585:CDS |
| CATTCTAGTGCTCATATTCT+TGG | 0.208832 | 5.1:+25700608 | MS.gene027585:CDS |
| GCTAGGTAGGATTCGTCTTT+GGG | 0.245204 | 5.1:-25700284 | None:intergenic |
| GGCTAGGTAGGATTCGTCTT+TGG | 0.245801 | 5.1:-25700285 | None:intergenic |
| CGAAGATTTGGATGCGCTTT+GGG | 0.258723 | 5.1:-25700316 | None:intergenic |
| TCTCTCACCCGATCCGATTA+AGG | 0.259833 | 5.1:+25700376 | MS.gene027585:CDS |
| GCGTGAGATTTCGAAGAATT+TGG | 0.270329 | 5.1:+25700463 | MS.gene027585:CDS |
| CTAAGGTTAATGGCGTTCTT+TGG | 0.274825 | 5.1:+25700504 | MS.gene027585:CDS |
| TAGAGCACTACAAGGGTAAA+TGG | 0.292473 | 5.1:+25708484 | MS.gene027585:CDS |
| CTTGAAGCGCCTCGAAGATT+TGG | 0.294864 | 5.1:-25700328 | None:intergenic |
| AAGGAAGCTTTGGATGAGTT+TGG | 0.338554 | 5.1:+25708034 | MS.gene027585:CDS |
| GCTTTGACAAAGGATGTATT+AGG | 0.342264 | 5.1:-25703269 | None:intergenic |
| TCGAAGATTTGGATGCGCTT+TGG | 0.343840 | 5.1:-25700317 | None:intergenic |
| AGCTTCTCTCAAGGAAGCTT+TGG | 0.345335 | 5.1:+25708024 | MS.gene027585:CDS |
| TCCAGGCTTCGTCAGCATAT+TGG | 0.363753 | 5.1:+25703412 | MS.gene027585:intron |
| CCCTTCCTTCACGTTTCCAT+CGG | 0.363807 | 5.1:-25700408 | None:intergenic |
| TCCAGGTGAGCGTACGAGTC+AGG | 0.368214 | 5.1:+25710477 | MS.gene027585:intron |
| ATGGCTCTGTGTATCATAAC+AGG | 0.378781 | 5.1:-25708426 | None:intergenic |
| ATGATACACAGAGCCATTCT+AGG | 0.381073 | 5.1:+25708432 | MS.gene027585:CDS |
| TCGGGAAGTGTAACCTTAAT+CGG | 0.383312 | 5.1:-25700389 | None:intergenic |
| ACAAGGGTAAATGGCCCTTC+TGG | 0.384970 | 5.1:+25708493 | MS.gene027585:CDS |
| ACCTTTAAACTCTTATTGTC+AGG | 0.387286 | 5.1:-25703486 | None:intergenic |
| CAAAGCAATTGCATGTTTGA+AGG | 0.391968 | 5.1:+25703286 | MS.gene027585:CDS |
| TAAGGTTAATGGCGTTCTTT+GGG | 0.392390 | 5.1:+25700505 | MS.gene027585:CDS |
| GATACACTGATGTCTATCTT+TGG | 0.399463 | 5.1:-25708207 | None:intergenic |
| TAGTCTCTTGAGACGGAGTA+TGG | 0.405636 | 5.1:+25701460 | MS.gene027585:intron |
| TACAACTACATCTTGGTTGT+TGG | 0.416034 | 5.1:+25709541 | MS.gene027585:CDS |
| CACCTTCTCCGCCGCCGCTA+TGG | 0.422030 | 5.1:+25700250 | MS.gene027585:CDS |
| CTTGTAGTGCTCTAAAAGTA+TGG | 0.424295 | 5.1:-25708475 | None:intergenic |
| TTTATGTTAGCCCGGGAAGC+TGG | 0.427800 | 5.1:+25705010 | MS.gene027585:intron |
| CATTGAAGTGACACGTGATC+AGG | 0.435475 | 5.1:+25702972 | MS.gene027585:CDS |
| ATATTTCCAAGGTATTTCTC+TGG | 0.438774 | 5.1:-25707980 | None:intergenic |
| AAGGAGTGTTACGGCGCAAA+CGG | 0.439945 | 5.1:-25700172 | None:intergenic |
| TAGTGCTCATATTCTTGGAC+AGG | 0.440831 | 5.1:+25700613 | MS.gene027585:CDS |
| TAGGATTCGTCTTTGGGGTG+AGG | 0.445890 | 5.1:-25700278 | None:intergenic |
| TAAAGATGATATGTTTGTCT+TGG | 0.449787 | 5.1:+25705263 | MS.gene027585:CDS |
| AAGAGTGAGGTTGTAGAAGA+AGG | 0.451803 | 5.1:-25700191 | None:intergenic |
| GCTTGTGATTTCTCCGAGAC+GGG | 0.452159 | 5.1:-25708543 | None:intergenic |
| CACCATAGCGGCGGCGGAGA+AGG | 0.454819 | 5.1:-25700252 | None:intergenic |
| CCTTCCTTCACGTTTCCATC+GGG | 0.457055 | 5.1:-25700407 | None:intergenic |
| GCGTTCTTTGGGATATGAAT+CGG | 0.457658 | 5.1:+25700516 | MS.gene027585:CDS |
| CACTTTAAACAAATTGTAGC+TGG | 0.458103 | 5.1:+25701669 | MS.gene027585:CDS |
| GTTCCAGTGTGCAACTCTAC+AGG | 0.458867 | 5.1:+25708248 | MS.gene027585:CDS |
| TAGATTGACAAACAAGAGTT+CGG | 0.461082 | 5.1:+25705978 | MS.gene027585:intron |
| TACTTCTCCTCTAGTAGTGC+AGG | 0.464959 | 5.1:-25701503 | None:intergenic |
| TGAGTGGATTAACACGTGTT+AGG | 0.465390 | 5.1:+25706505 | MS.gene027585:CDS |
| ACTTAAAACGATCAGGAAGC+TGG | 0.466587 | 5.1:-25708365 | None:intergenic |
| GAGCGTACGAGTCAGGGATA+AGG | 0.472636 | 5.1:+25710484 | MS.gene027585:CDS |
| CGTCTTTGAAGTGTTCGAGC+AGG | 0.475371 | 5.1:-25710535 | None:intergenic |
| GTCACTTCAATGCGCTCAAA+GGG | 0.482157 | 5.1:-25702961 | None:intergenic |
| TGCAGTTGAATGAAGGGGAT+GGG | 0.484436 | 5.1:+25708172 | MS.gene027585:intron |
| ACGTGAAGGAAGGGAAGAAA+TGG | 0.484460 | 5.1:+25700417 | MS.gene027585:CDS |
| AATTCCAACTTAAAACGATC+AGG | 0.486336 | 5.1:-25708372 | None:intergenic |
| AGCACAATACAACTACATCT+TGG | 0.490255 | 5.1:+25709534 | MS.gene027585:CDS |
| AGATGATATGTTTGTCTTGG+AGG | 0.491603 | 5.1:+25705266 | MS.gene027585:CDS |
| AGGATTCGTCTTTGGGGTGA+GGG | 0.493228 | 5.1:-25700277 | None:intergenic |
| CTGCTTGATGTTTAAACACC+GGG | 0.493845 | 5.1:+25706028 | MS.gene027585:CDS |
| TTCGAGATCAGTACAGAGAC+AGG | 0.496512 | 5.1:+25705082 | MS.gene027585:CDS |
| CGCTTGTGATTTCTCCGAGA+CGG | 0.498168 | 5.1:-25708544 | None:intergenic |
| AGGTCCATGTTGAAGACATT+CGG | 0.498937 | 5.1:-25705210 | None:intergenic |
| TTTAAGTTTGATGATGATGA+AGG | 0.505251 | 5.1:+25700569 | MS.gene027585:CDS |
| TTAAACATCAAGCAGTGCCC+TGG | 0.506802 | 5.1:-25706020 | None:intergenic |
| AGGCTTCGTCAGCATATTGG+AGG | 0.507081 | 5.1:+25703415 | MS.gene027585:intron |
| AGCTAATTTATCATCATGAC+TGG | 0.507221 | 5.1:+25704911 | MS.gene027585:CDS |
| AGTGTAACCTTAATCGGATC+GGG | 0.509009 | 5.1:-25700383 | None:intergenic |
| GAATAATGCTCTTATTGCTA+AGG | 0.509045 | 5.1:+25700487 | MS.gene027585:CDS |
| TGGGATTGTTGCGGCTAGGT+AGG | 0.511870 | 5.1:-25700297 | None:intergenic |
| ATCACAAGCGTATGCACTGC+AGG | 0.512893 | 5.1:+25708557 | MS.gene027585:CDS |
| TATGGATGCAAGCTTTGCAT+TGG | 0.514825 | 5.1:+25701478 | MS.gene027585:CDS |
| CGAGATCAGATCCACCAAGC+AGG | 0.516319 | 5.1:+25709078 | MS.gene027585:CDS |
| AGCGGCGGCGGAGAAGGTGG+TGG | 0.517284 | 5.1:-25700246 | None:intergenic |
| TGAGTTTGGCAAACCATGGC+AGG | 0.518859 | 5.1:+25708048 | MS.gene027585:CDS |
| AGGGACCACCATAGCGGCGG+CGG | 0.525231 | 5.1:-25700258 | None:intergenic |
| CAGTGCCCTGGGCAATTCAT+CGG | 0.525822 | 5.1:-25706008 | None:intergenic |
| ACATGCAATTGCTTTGACAA+AGG | 0.526101 | 5.1:-25703279 | None:intergenic |
| AGCAATTCTCTGCCCCGTCT+CGG | 0.527465 | 5.1:+25708530 | MS.gene027585:CDS |
| AGAAGGTGGTGGAAGAGAAT+CGG | 0.527755 | 5.1:-25700235 | None:intergenic |
| TTGAAACCGATGAATTGCCC+AGG | 0.527757 | 5.1:+25706002 | MS.gene027585:CDS |
| TAATCCACTCAGGGCACCAC+TGG | 0.530558 | 5.1:-25706493 | None:intergenic |
| CTACGTGATACCCTGCTTGG+TGG | 0.530716 | 5.1:-25709089 | None:intergenic |
| CCCGATGGAAACGTGAAGGA+AGG | 0.532344 | 5.1:+25700407 | MS.gene027585:CDS |
| CAAACTCTGCAGTTGAATGA+AGG | 0.533204 | 5.1:+25708165 | MS.gene027585:intron |
| CTTCTCCGCCGCCGCTATGG+TGG | 0.536008 | 5.1:+25700253 | MS.gene027585:CDS |
| TGTCACTTCAATGCGCTCAA+AGG | 0.539336 | 5.1:-25702962 | None:intergenic |
| ATGGACCTGTGGGTGCAATC+TGG | 0.540479 | 5.1:+25705225 | MS.gene027585:CDS |
| CCCACGTTTCAATATTTCCA+AGG | 0.541391 | 5.1:-25707991 | None:intergenic |
| ATCTCACGCGCAATATCAAA+CGG | 0.541806 | 5.1:-25700449 | None:intergenic |
| TGACAGGAAGATTCAGAAGA+AGG | 0.543532 | 5.1:+25709125 | MS.gene027585:CDS |
| CATCTACGTGATACCCTGCT+TGG | 0.545135 | 5.1:-25709092 | None:intergenic |
| TTGCCGCGGACTTAGCCAGA+AGG | 0.546210 | 5.1:-25708508 | None:intergenic |
| CATAGCGGCGGCGGAGAAGG+TGG | 0.547433 | 5.1:-25700249 | None:intergenic |
| ATCGGAAACGGTTACCGATG+TGG | 0.549581 | 5.1:-25700217 | None:intergenic |
| GCAGTTGAATGAAGGGGATG+GGG | 0.550075 | 5.1:+25708173 | MS.gene027585:intron |
| TATTTCAGGAATATTTGGAT+CGG | 0.550856 | 5.1:+25704839 | MS.gene027585:intron |
| TAGAGACCAGAGAAATACCT+TGG | 0.551784 | 5.1:+25707974 | MS.gene027585:intron |
| CCAGGTGAGCGTACGAGTCA+GGG | 0.552161 | 5.1:+25710478 | MS.gene027585:intron |
| ACGTGTTAGGAGATTTCAGC+AGG | 0.553676 | 5.1:+25706518 | MS.gene027585:CDS |
| AAGGATGTATTAGGAATATG+AGG | 0.553799 | 5.1:-25703260 | None:intergenic |
| CTGCAGTTGAATGAAGGGGA+TGG | 0.556184 | 5.1:+25708171 | MS.gene027585:intron |
| TTGTAGAAGAAGGAGTGTTA+CGG | 0.559927 | 5.1:-25700181 | None:intergenic |
| GACATGATCGATGAAGTTCA+AGG | 0.560855 | 5.1:-25707012 | None:intergenic |
| AAAGCGCATCCAAATCTTCG+AGG | 0.560974 | 5.1:+25700319 | MS.gene027585:CDS |
| GTGTATCTGATGCATTGAGC+AGG | 0.561339 | 5.1:+25708223 | MS.gene027585:CDS |
| CATCTTGGTTGTTGGCGAAG+AGG | 0.562345 | 5.1:+25709549 | MS.gene027585:CDS |
| GGCTTCGTCAGCATATTGGA+GGG | 0.567002 | 5.1:+25703416 | MS.gene027585:intron |
| CCCCTCGTTGATTTGTGTCG+AGG | 0.568618 | 5.1:+25703236 | MS.gene027585:CDS |
| AAGTGTAACCTTAATCGGAT+CGG | 0.571063 | 5.1:-25700384 | None:intergenic |
| TAAACATCAAGCAGTGCCCT+GGG | 0.571207 | 5.1:-25706019 | None:intergenic |
| GGCGAAGAGGAAGCTAAGAC+AGG | 0.572491 | 5.1:+25709562 | MS.gene027585:CDS |
| GAAGGCTGAAGCTTCTCTCA+AGG | 0.573542 | 5.1:+25708015 | MS.gene027585:CDS |
| AAACCCCAAAATCAGCAAAA+CGG | 0.576768 | 5.1:-25706455 | None:intergenic |
| ACTGCTTGATGTTTAAACAC+CGG | 0.577476 | 5.1:+25706027 | MS.gene027585:CDS |
| CTTCGTCAGCATATTGGAGG+GGG | 0.582105 | 5.1:+25703418 | MS.gene027585:CDS |
| AAACTCTGCAGTTGAATGAA+GGG | 0.584420 | 5.1:+25708166 | MS.gene027585:intron |
| AGAGGAAGCTAAGACAGGAC+AGG | 0.584811 | 5.1:+25709567 | MS.gene027585:CDS |
| TGCCGCGGACTTAGCCAGAA+GGG | 0.587618 | 5.1:-25708507 | None:intergenic |
| GCGTTCAACAGATCCTAGAA+TGG | 0.588283 | 5.1:-25708445 | None:intergenic |
| TAAGTTGGAATTCTCAGCTG+AGG | 0.589792 | 5.1:+25708383 | MS.gene027585:CDS |
| CATGACCAGATTGCACCCAC+AGG | 0.589989 | 5.1:-25705230 | None:intergenic |
| AAATATTGAAACGTGGGAGA+AGG | 0.594497 | 5.1:+25707997 | MS.gene027585:CDS |
| TACCTCTGTACGATCGAACC+CGG | 0.597410 | 5.1:-25706046 | None:intergenic |
| GATGCGCTTTGGGATTGTTG+CGG | 0.598519 | 5.1:-25700306 | None:intergenic |
| ACTGTTATAGTCTTATCAGC+GGG | 0.598653 | 5.1:-25703200 | None:intergenic |
| AGCGATGAATCCTCTTCAAG+AGG | 0.600890 | 5.1:-25700539 | None:intergenic |
| ATATGAACTGAAACTTTCAA+CGG | 0.601256 | 5.1:+25707055 | MS.gene027585:CDS |
| GACCTCTAGAATACCTGCCA+TGG | 0.602239 | 5.1:-25708061 | None:intergenic |
| ACCTTGGAAATATTGAAACG+TGG | 0.605393 | 5.1:+25707990 | MS.gene027585:CDS |
| CCTTGGAAATATTGAAACGT+GGG | 0.610408 | 5.1:+25707991 | MS.gene027585:CDS |
| CCGATGGAAACGTGAAGGAA+GGG | 0.612023 | 5.1:+25700408 | MS.gene027585:CDS |
| GTGTGTGTAGTCTCTTGAGA+CGG | 0.612057 | 5.1:+25701453 | MS.gene027585:intron |
| CTAGGTAGGATTCGTCTTTG+GGG | 0.612170 | 5.1:-25700283 | None:intergenic |
| TATGAATCGGCCTCTTGAAG+AGG | 0.613882 | 5.1:+25700529 | MS.gene027585:CDS |
| CTTGTGATTTCTCCGAGACG+GGG | 0.616634 | 5.1:-25708542 | None:intergenic |
| CAGAGACAGGGGCTATCAAG+AGG | 0.619774 | 5.1:+25705095 | MS.gene027585:CDS |
| TTAAGTTTGATGATGATGAA+GGG | 0.620692 | 5.1:+25700570 | MS.gene027585:CDS |
| GTGAGGGACCACCATAGCGG+CGG | 0.622273 | 5.1:-25700261 | None:intergenic |
| TGGATGAGTTTGGCAAACCA+TGG | 0.622699 | 5.1:+25708044 | MS.gene027585:CDS |
| GCTTTGGGATTGTTGCGGCT+AGG | 0.623569 | 5.1:-25700301 | None:intergenic |
| TGGAGCGTTGAAAGCTGTTG+CGG | 0.624816 | 5.1:+25701689 | MS.gene027585:CDS |
| TAACACGTGTTAATCCACTC+AGG | 0.625438 | 5.1:-25706503 | None:intergenic |
| GGCCCTTCTGGCTAAGTCCG+CGG | 0.626956 | 5.1:+25708505 | MS.gene027585:CDS |
| ACTATAACAGTGTACAGATG+TGG | 0.628180 | 5.1:+25703212 | MS.gene027585:CDS |
| TAGATGCTGATACAACTGAC+AGG | 0.628481 | 5.1:+25709109 | MS.gene027585:CDS |
| ATTAAGGTTACACTTCCCGA+TGG | 0.628911 | 5.1:+25700392 | MS.gene027585:CDS |
| GCTTCGTCAGCATATTGGAG+GGG | 0.630416 | 5.1:+25703417 | MS.gene027585:CDS |
| GAGATCAGATCCACCAAGCA+GGG | 0.631470 | 5.1:+25709079 | MS.gene027585:CDS |
| GGGCAGAGAATTGCTTGCCG+CGG | 0.634580 | 5.1:-25708522 | None:intergenic |
| TGAAACCGATGAATTGCCCA+GGG | 0.635498 | 5.1:+25706003 | MS.gene027585:CDS |
| ACCTCACTCTTTCTCCACAT+CGG | 0.639664 | 5.1:+25700203 | MS.gene027585:CDS |
| TCTCAATAGTCATGACGTTG+TGG | 0.642556 | 5.1:-25710511 | None:intergenic |
| TTGCATCGAAATGAGGCCAG+TGG | 0.643531 | 5.1:+25706477 | MS.gene027585:CDS |
| ATGTCTTCAACATGGACCTG+TGG | 0.643638 | 5.1:+25705214 | MS.gene027585:CDS |
| TTGTAGATCCGAGCACCATG+TGG | 0.643916 | 5.1:-25705042 | None:intergenic |
| ATTGGACCCTGCACTACTAG+AGG | 0.644694 | 5.1:+25701496 | MS.gene027585:CDS |
| ACTTCTCCTCTAGTAGTGCA+GGG | 0.646239 | 5.1:-25701502 | None:intergenic |
| AACTCTGCAGTTGAATGAAG+GGG | 0.646831 | 5.1:+25708167 | MS.gene027585:intron |
| AACACGTGTTAATCCACTCA+GGG | 0.648107 | 5.1:-25706502 | None:intergenic |
| ATATTTGGATCGGCTTACAG+AGG | 0.648297 | 5.1:+25704849 | MS.gene027585:CDS |
| TCCTCGACACAAATCAACGA+GGG | 0.649373 | 5.1:-25703237 | None:intergenic |
| CACTGTTATAGTCTTATCAG+CGG | 0.651235 | 5.1:-25703201 | None:intergenic |
| TGTCTTCAACATGGACCTGT+GGG | 0.651235 | 5.1:+25705215 | MS.gene027585:CDS |
| AAACCTGTAGAGTTGCACAC+TGG | 0.652434 | 5.1:-25708251 | None:intergenic |
| TGGTGGAAGAGAATCGGAAA+CGG | 0.653941 | 5.1:-25700229 | None:intergenic |
| TCGAGATCAGTACAGAGACA+GGG | 0.655527 | 5.1:+25705083 | MS.gene027585:CDS |
| CACCGGGTTCGATCGTACAG+AGG | 0.658534 | 5.1:+25706044 | MS.gene027585:CDS |
| GTGGGTGCAATCTGGTCATG+CGG | 0.661772 | 5.1:+25705233 | MS.gene027585:CDS |
| GAGGCCAGTGGTGCCCTGAG+TGG | 0.667648 | 5.1:+25706489 | MS.gene027585:CDS |
| ACCGATGTGGAGAAAGAGTG+AGG | 0.669020 | 5.1:-25700204 | None:intergenic |
| ACTTCCCGATGGAAACGTGA+AGG | 0.671910 | 5.1:+25700403 | MS.gene027585:CDS |
| TAATTTATCATCATGACTGG+AGG | 0.674143 | 5.1:+25704914 | MS.gene027585:CDS |
| CCAAAATCAGCAAAACGGAG+AGG | 0.680957 | 5.1:-25706450 | None:intergenic |
| GATCGGGTGAGAGAGAAAGA+CGG | 0.686294 | 5.1:-25700367 | None:intergenic |
| GGGGTGAGGGACCACCATAG+CGG | 0.688616 | 5.1:-25700264 | None:intergenic |
| TTCGTCAGCATATTGGAGGG+GGG | 0.691441 | 5.1:+25703419 | MS.gene027585:CDS |
| CGAGATCAGTACAGAGACAG+GGG | 0.693823 | 5.1:+25705084 | MS.gene027585:CDS |
| ATCACCGAATGTCTTCAACA+TGG | 0.700922 | 5.1:+25705206 | MS.gene027585:CDS |
| CCTCGACACAAATCAACGAG+GGG | 0.726336 | 5.1:-25703236 | None:intergenic |
| GTCCTCGACACAAATCAACG+AGG | 0.758098 | 5.1:-25703238 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 25700155 | 25710577 | 25700155 | ID=MS.gene027585 |
| chr5.1 | mRNA | 25700155 | 25710577 | 25700155 | ID=MS.gene027585.t1;Parent=MS.gene027585 |
| chr5.1 | exon | 25700155 | 25700634 | 25700155 | ID=MS.gene027585.t1.exon1;Parent=MS.gene027585.t1 |
| chr5.1 | CDS | 25700155 | 25700634 | 25700155 | ID=cds.MS.gene027585.t1;Parent=MS.gene027585.t1 |
| chr5.1 | exon | 25701463 | 25701522 | 25701463 | ID=MS.gene027585.t1.exon2;Parent=MS.gene027585.t1 |
| chr5.1 | CDS | 25701463 | 25701522 | 25701463 | ID=cds.MS.gene027585.t1;Parent=MS.gene027585.t1 |
| chr5.1 | exon | 25701621 | 25701710 | 25701621 | ID=MS.gene027585.t1.exon3;Parent=MS.gene027585.t1 |
| chr5.1 | CDS | 25701621 | 25701710 | 25701621 | ID=cds.MS.gene027585.t1;Parent=MS.gene027585.t1 |
| chr5.1 | exon | 25702952 | 25703026 | 25702952 | ID=MS.gene027585.t1.exon4;Parent=MS.gene027585.t1 |
| chr5.1 | CDS | 25702952 | 25703026 | 25702952 | ID=cds.MS.gene027585.t1;Parent=MS.gene027585.t1 |
| chr5.1 | exon | 25703179 | 25703307 | 25703179 | ID=MS.gene027585.t1.exon5;Parent=MS.gene027585.t1 |
| chr5.1 | CDS | 25703179 | 25703307 | 25703179 | ID=cds.MS.gene027585.t1;Parent=MS.gene027585.t1 |
| chr5.1 | exon | 25703417 | 25703506 | 25703417 | ID=MS.gene027585.t1.exon6;Parent=MS.gene027585.t1 |
| chr5.1 | CDS | 25703417 | 25703506 | 25703417 | ID=cds.MS.gene027585.t1;Parent=MS.gene027585.t1 |
| chr5.1 | exon | 25704847 | 25704935 | 25704847 | ID=MS.gene027585.t1.exon7;Parent=MS.gene027585.t1 |
| chr5.1 | CDS | 25704847 | 25704935 | 25704847 | ID=cds.MS.gene027585.t1;Parent=MS.gene027585.t1 |
| chr5.1 | exon | 25705020 | 25705116 | 25705020 | ID=MS.gene027585.t1.exon8;Parent=MS.gene027585.t1 |
| chr5.1 | CDS | 25705020 | 25705116 | 25705020 | ID=cds.MS.gene027585.t1;Parent=MS.gene027585.t1 |
| chr5.1 | exon | 25705201 | 25705287 | 25705201 | ID=MS.gene027585.t1.exon9;Parent=MS.gene027585.t1 |
| chr5.1 | CDS | 25705201 | 25705287 | 25705201 | ID=cds.MS.gene027585.t1;Parent=MS.gene027585.t1 |
| chr5.1 | exon | 25705981 | 25706065 | 25705981 | ID=MS.gene027585.t1.exon10;Parent=MS.gene027585.t1 |
| chr5.1 | CDS | 25705981 | 25706065 | 25705981 | ID=cds.MS.gene027585.t1;Parent=MS.gene027585.t1 |
| chr5.1 | exon | 25706445 | 25706539 | 25706445 | ID=MS.gene027585.t1.exon11;Parent=MS.gene027585.t1 |
| chr5.1 | CDS | 25706445 | 25706539 | 25706445 | ID=cds.MS.gene027585.t1;Parent=MS.gene027585.t1 |
| chr5.1 | exon | 25706870 | 25706902 | 25706870 | ID=MS.gene027585.t1.exon12;Parent=MS.gene027585.t1 |
| chr5.1 | CDS | 25706870 | 25706902 | 25706870 | ID=cds.MS.gene027585.t1;Parent=MS.gene027585.t1 |
| chr5.1 | exon | 25706990 | 25707076 | 25706990 | ID=MS.gene027585.t1.exon13;Parent=MS.gene027585.t1 |
| chr5.1 | CDS | 25706990 | 25707076 | 25706990 | ID=cds.MS.gene027585.t1;Parent=MS.gene027585.t1 |
| chr5.1 | exon | 25707977 | 25708069 | 25707977 | ID=MS.gene027585.t1.exon14;Parent=MS.gene027585.t1 |
| chr5.1 | CDS | 25707977 | 25708069 | 25707977 | ID=cds.MS.gene027585.t1;Parent=MS.gene027585.t1 |
| chr5.1 | exon | 25708177 | 25708269 | 25708177 | ID=MS.gene027585.t1.exon15;Parent=MS.gene027585.t1 |
| chr5.1 | CDS | 25708177 | 25708269 | 25708177 | ID=cds.MS.gene027585.t1;Parent=MS.gene027585.t1 |
| chr5.1 | exon | 25708357 | 25708578 | 25708357 | ID=MS.gene027585.t1.exon16;Parent=MS.gene027585.t1 |
| chr5.1 | CDS | 25708357 | 25708578 | 25708357 | ID=cds.MS.gene027585.t1;Parent=MS.gene027585.t1 |
| chr5.1 | exon | 25709075 | 25709146 | 25709075 | ID=MS.gene027585.t1.exon17;Parent=MS.gene027585.t1 |
| chr5.1 | CDS | 25709075 | 25709146 | 25709075 | ID=cds.MS.gene027585.t1;Parent=MS.gene027585.t1 |
| chr5.1 | exon | 25709517 | 25709588 | 25709517 | ID=MS.gene027585.t1.exon18;Parent=MS.gene027585.t1 |
| chr5.1 | CDS | 25709517 | 25709588 | 25709517 | ID=cds.MS.gene027585.t1;Parent=MS.gene027585.t1 |
| chr5.1 | exon | 25710482 | 25710577 | 25710482 | ID=MS.gene027585.t1.exon19;Parent=MS.gene027585.t1 |
| chr5.1 | CDS | 25710482 | 25710577 | 25710482 | ID=cds.MS.gene027585.t1;Parent=MS.gene027585.t1 |
| Gene Sequence |
| Protein sequence |
