Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35246.t1 | XP_003613276.1 | 94.6 | 670 | 33 | 1 | 1 | 670 | 36 | 702 | 0.00E+00 | 1309.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35246.t1 | O04630 | 74.4 | 668 | 168 | 1 | 1 | 668 | 34 | 698 | 2.6e-306 | 1052.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35246.t1 | G7K2Q8 | 94.6 | 670 | 33 | 1 | 1 | 670 | 36 | 702 | 0.0e+00 | 1309.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene35246 | MS.gene27335 | PPI |
MS.gene35246 | MS.gene41088 | PPI |
MS.gene69330 | MS.gene35246 | PPI |
MS.gene26939 | MS.gene35246 | PPI |
MS.gene056036 | MS.gene35246 | PPI |
MS.gene77474 | MS.gene35246 | PPI |
MS.gene055573 | MS.gene35246 | PPI |
MS.gene014350 | MS.gene35246 | PPI |
MS.gene064832 | MS.gene35246 | PPI |
MS.gene005227 | MS.gene35246 | PPI |
MS.gene44095 | MS.gene35246 | PPI |
MS.gene034805 | MS.gene35246 | PPI |
MS.gene52774 | MS.gene35246 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35246.t1 | MTR_5g034820 | 94.627 | 670 | 33 | 1 | 1 | 670 | 36 | 702 | 0.0 | 1322 |
MS.gene35246.t1 | MTR_5g034820 | 96.585 | 410 | 13 | 1 | 642 | 1050 | 302 | 711 | 0.0 | 823 |
MS.gene35246.t1 | MTR_3g083180 | 40.631 | 539 | 304 | 12 | 114 | 643 | 86 | 617 | 4.32e-126 | 399 |
MS.gene35246.t1 | MTR_3g083180 | 42.432 | 403 | 226 | 5 | 645 | 1043 | 243 | 643 | 1.83e-101 | 333 |
MS.gene35246.t1 | MTR_3g077340 | 70.320 | 219 | 49 | 2 | 115 | 333 | 35 | 237 | 2.00e-97 | 308 |
MS.gene35246.t1 | MTR_3g077340 | 73.913 | 69 | 17 | 1 | 640 | 707 | 169 | 237 | 3.19e-27 | 111 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35246.t1 | AT5G26830 | 74.401 | 668 | 168 | 1 | 1 | 668 | 34 | 698 | 0.0 | 1050 |
MS.gene35246.t1 | AT5G26830 | 73.966 | 411 | 106 | 1 | 640 | 1049 | 298 | 708 | 0.0 | 645 |
MS.gene35246.t1 | AT2G04842 | 40.000 | 540 | 308 | 13 | 114 | 644 | 84 | 616 | 1.87e-124 | 395 |
MS.gene35246.t1 | AT2G04842 | 39.130 | 460 | 259 | 8 | 605 | 1048 | 192 | 646 | 8.08e-99 | 326 |
MS.gene35246.t1 | AT2G04842 | 40.000 | 540 | 308 | 13 | 114 | 644 | 84 | 616 | 1.87e-124 | 395 |
MS.gene35246.t1 | AT2G04842 | 39.130 | 460 | 259 | 8 | 605 | 1048 | 192 | 646 | 8.08e-99 | 326 |
MS.gene35246.t1 | AT1G17960 | 63.194 | 288 | 101 | 2 | 760 | 1043 | 92 | 378 | 1.18e-123 | 383 |
MS.gene35246.t1 | AT1G17960 | 66.154 | 260 | 87 | 1 | 386 | 645 | 92 | 350 | 1.32e-118 | 370 |
MS.gene35246.t1 | AT1G17960 | 62.637 | 91 | 33 | 1 | 5 | 94 | 6 | 96 | 1.55e-28 | 119 |
MS.gene35246.t1 | AT1G17960 | 63.380 | 284 | 99 | 2 | 764 | 1043 | 169 | 451 | 3.77e-121 | 379 |
MS.gene35246.t1 | AT1G17960 | 66.406 | 256 | 85 | 1 | 390 | 645 | 169 | 423 | 4.93e-116 | 366 |
MS.gene35246.t1 | AT1G17960 | 66.258 | 163 | 53 | 2 | 5 | 165 | 6 | 168 | 2.32e-66 | 231 |
MS.gene35246.t1 | AT1G18130 | 67.808 | 146 | 43 | 1 | 898 | 1043 | 17 | 158 | 3.14e-61 | 206 |
MS.gene35246.t1 | AT1G18130 | 72.131 | 122 | 34 | 0 | 524 | 645 | 17 | 138 | 4.00e-56 | 192 |
Find 264 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATAACAGGTCTCTCAATTT+TGG | 0.134497 | 6.2:-1815256 | None:intergenic |
CATAACAGGTCTCTCAATTT+TGG | 0.134497 | 6.2:-1822308 | None:intergenic |
GAAAGTTTACAAAGAGTTTA+TGG | 0.138256 | 6.2:+1808858 | MS.gene35246:CDS |
GATCATGTCTATAAAATATT+TGG | 0.175700 | 6.2:+1813710 | MS.gene35246:CDS |
GATCATGTCTATAAAATATT+TGG | 0.175700 | 6.2:+1820763 | MS.gene35246:CDS |
GCTCTTATTGCTAAGGTTAA+TGG | 0.194013 | 6.2:+1805470 | MS.gene35246:CDS |
TCCTGACAATAAGAGTTTAA+AGG | 0.208364 | 6.2:+1808890 | MS.gene35246:CDS |
GCTAGGTAGGATTCGTCTTT+GGG | 0.215030 | 6.2:-1805260 | None:intergenic |
CATTCCAGTGCTCATATTCT+TGG | 0.222307 | 6.2:+1805584 | MS.gene35246:CDS |
GGCTAGGTAGGATTCGTCTT+TGG | 0.223839 | 6.2:-1805261 | None:intergenic |
ACTCTCTCCCGATCCGATTA+AGG | 0.249200 | 6.2:+1805352 | MS.gene35246:CDS |
CGAAGATTTGGATGCGCTTT+GGG | 0.258723 | 6.2:-1805292 | None:intergenic |
CTAAGGTTAATGGCGTTCTT+TGG | 0.274825 | 6.2:+1805480 | MS.gene35246:CDS |
TAGAGCACTACAAGGGTAAA+TGG | 0.292473 | 6.2:+1815328 | MS.gene35246:CDS |
TAGAGCACTACAAGGGTAAA+TGG | 0.292473 | 6.2:+1822380 | MS.gene35246:CDS |
CTTGAAGCGCCTCGAAGATT+TGG | 0.294864 | 6.2:-1805304 | None:intergenic |
AGCTTCTCTCAAGGAAGCTT+TGG | 0.312996 | 6.2:+1821774 | MS.gene35246:CDS |
AAGGAAGCTTTGTATGAGTT+TGG | 0.327131 | 6.2:+1814732 | MS.gene35246:CDS |
GCTTTGACAAAGGATGTATT+AGG | 0.342264 | 6.2:-1808678 | None:intergenic |
TCGAAGATTTGGATGCGCTT+TGG | 0.343840 | 6.2:-1805293 | None:intergenic |
TCCAGGCTTCGTCAGCATAT+TGG | 0.363753 | 6.2:+1808817 | MS.gene35246:intron |
CCCTTCCTTCACGTTTCCAT+CGG | 0.363807 | 6.2:-1805384 | None:intergenic |
TAGATCGACAAACAAGAGTT+TGG | 0.376190 | 6.2:+1812636 | MS.gene35246:intron |
TAGATCGACAAACAAGAGTT+TGG | 0.376190 | 6.2:+1819689 | MS.gene35246:intron |
ACAAGGGTAAATGGCCCTTC+TGG | 0.379782 | 6.2:+1815337 | MS.gene35246:CDS |
ACAAGGGTAAATGGCCCTTC+TGG | 0.379782 | 6.2:+1822389 | MS.gene35246:CDS |
TCCAGGTGAGTGTACGTGTC+AGG | 0.382554 | 6.2:+1824349 | MS.gene35246:intron |
TCGGGAAGTGTAACCTTAAT+CGG | 0.383312 | 6.2:-1805365 | None:intergenic |
ACCTTTAAACTCTTATTGTC+AGG | 0.387286 | 6.2:-1808891 | None:intergenic |
ATGATACATAGAGCCATTCT+AGG | 0.389401 | 6.2:+1815276 | MS.gene35246:CDS |
ATGATACATAGAGCCATTCT+AGG | 0.389401 | 6.2:+1822328 | MS.gene35246:CDS |
CAAAGCAATTGCATGTTTGA+AGG | 0.391968 | 6.2:+1808695 | MS.gene35246:CDS |
TAAGGTTAATGGCGTTCTTT+GGG | 0.392390 | 6.2:+1805481 | MS.gene35246:CDS |
GATACACTGATGTCTATCTT+TGG | 0.399463 | 6.2:-1815047 | None:intergenic |
GATACACTGATGTCTATCTT+TGG | 0.399463 | 6.2:-1822099 | None:intergenic |
ATGGCTCTATGTATCATAAC+AGG | 0.401031 | 6.2:-1815270 | None:intergenic |
ATGGCTCTATGTATCATAAC+AGG | 0.401031 | 6.2:-1822322 | None:intergenic |
TAGTCTCTTGAGACGGAGTA+TGG | 0.405636 | 6.2:+1806532 | MS.gene35246:intron |
GCTTGTGATTTCTCCGAGAC+AGG | 0.407769 | 6.2:-1815387 | None:intergenic |
GCTTGTGATTTCTCCGAGAC+AGG | 0.407769 | 6.2:-1822439 | None:intergenic |
TAAAGAGGATATGTTTGTCT+TGG | 0.413382 | 6.2:+1811614 | MS.gene35246:CDS |
TAAAGAGGATATGTTTGTCT+TGG | 0.413382 | 6.2:+1818667 | MS.gene35246:CDS |
TACAACTACATCTTGGTTGT+TGG | 0.416034 | 6.2:+1816376 | MS.gene35246:CDS |
TACAACTACATCTTGGTTGT+TGG | 0.416034 | 6.2:+1823445 | MS.gene35246:CDS |
GCTTCTCTCAAGGAAGCTTT+GGG | 0.419075 | 6.2:+1821775 | MS.gene35246:CDS |
CTTGTAGTGCTCTAAAAGTA+TGG | 0.424295 | 6.2:-1815319 | None:intergenic |
CTTGTAGTGCTCTAAAAGTA+TGG | 0.424295 | 6.2:-1822371 | None:intergenic |
TTTATGTTAGCCCGGGAAGC+TGG | 0.427800 | 6.2:+1811361 | MS.gene35246:intron |
TTTATGTTAGCCCGGGAAGC+TGG | 0.427800 | 6.2:+1818414 | MS.gene35246:intron |
CAGTGCTCATATTCTTGGAC+AGG | 0.431144 | 6.2:+1805589 | MS.gene35246:CDS |
CATTGAAGTGACACGGGATC+AGG | 0.435302 | 6.2:+1808382 | MS.gene35246:CDS |
ATATTTCCAAGGTATTTCTC+TGG | 0.438774 | 6.2:-1814678 | None:intergenic |
ATATTTCCAAGGTATTTCTC+TGG | 0.438774 | 6.2:-1821730 | None:intergenic |
CAAACTCTGCAGTTGAATGA+AGG | 0.441767 | 6.2:+1815005 | MS.gene35246:intron |
CAAACTCTGCAGTTGAATGA+AGG | 0.441767 | 6.2:+1822057 | MS.gene35246:intron |
TAGGATTCGTCTTTGGGGTG+AGG | 0.445890 | 6.2:-1805254 | None:intergenic |
CCTTCCTTCACGTTTCCATC+GGG | 0.457055 | 6.2:-1805383 | None:intergenic |
GCGTTCTTTGGGATATGAAT+CGG | 0.457658 | 6.2:+1805492 | MS.gene35246:CDS |
GTTCCAGTGTGCAACTCTAC+AGG | 0.458867 | 6.2:+1815088 | MS.gene35246:CDS |
GTTCCAGTGTGCAACTCTAC+AGG | 0.458867 | 6.2:+1822140 | MS.gene35246:CDS |
TGGGATTGTGGCGGCTAGGT+AGG | 0.464262 | 6.2:-1805273 | None:intergenic |
GGTGACTTGGGTTTGAATCA+TGG | 0.464267 | 6.2:+1806721 | MS.gene35246:CDS |
GAGTGTACGTGTCAGGGATA+AGG | 0.464711 | 6.2:+1824356 | MS.gene35246:CDS |
ACTTAAAACGATCAGGAAGC+TGG | 0.466587 | 6.2:-1815209 | None:intergenic |
ACTTAAAACGATCAGGAAGC+TGG | 0.466587 | 6.2:-1822261 | None:intergenic |
CGTCTTTGAAGTGTTCGAGC+AGG | 0.475371 | 6.2:-1824407 | None:intergenic |
AGCTTATTTATCATCATGAC+TGG | 0.476659 | 6.2:+1811262 | MS.gene35246:CDS |
AGCTTATTTATCATCATGAC+TGG | 0.476659 | 6.2:+1818315 | MS.gene35246:CDS |
GTCACTTCAATGCGCTCAAA+GGG | 0.480695 | 6.2:-1808371 | None:intergenic |
TACCTCTCCTCTAGTAGTGC+AGG | 0.480738 | 6.2:-1806575 | None:intergenic |
TTGGATGCGCTTTGGGATTG+TGG | 0.483682 | 6.2:-1805285 | None:intergenic |
ACGTGAAGGAAGGGAAGAAA+TGG | 0.484460 | 6.2:+1805393 | MS.gene35246:CDS |
AGGTCCATGTTGAAGACATT+GGG | 0.486035 | 6.2:-1811561 | None:intergenic |
AGGTCCATGTTGAAGACATT+GGG | 0.486035 | 6.2:-1818614 | None:intergenic |
AATTCCAACTTAAAACGATC+AGG | 0.486336 | 6.2:-1815216 | None:intergenic |
AATTCCAACTTAAAACGATC+AGG | 0.486336 | 6.2:-1822268 | None:intergenic |
TAATCCACGCAGGGCACCAC+TGG | 0.487659 | 6.2:-1813175 | None:intergenic |
TAATCCACGCAGGGCACCAC+TGG | 0.487659 | 6.2:-1820228 | None:intergenic |
AGCACAATACAACTACATCT+TGG | 0.490255 | 6.2:+1816369 | MS.gene35246:CDS |
AGCACAATACAACTACATCT+TGG | 0.490255 | 6.2:+1823438 | MS.gene35246:CDS |
AGAGGATATGTTTGTCTTGG+AGG | 0.491603 | 6.2:+1811617 | MS.gene35246:CDS |
AGAGGATATGTTTGTCTTGG+AGG | 0.491603 | 6.2:+1818670 | MS.gene35246:CDS |
AGGATTCGTCTTTGGGGTGA+GGG | 0.493228 | 6.2:-1805253 | None:intergenic |
CTGCTTGATGTTTAAACACC+GGG | 0.493845 | 6.2:+1812686 | MS.gene35246:CDS |
CTGCTTGATGTTTAAACACC+GGG | 0.493845 | 6.2:+1819739 | MS.gene35246:CDS |
AGTGTAACCTTAATCGGATC+GGG | 0.504192 | 6.2:-1805359 | None:intergenic |
TTTAAGTTTGATGATGATGA+AGG | 0.505251 | 6.2:+1805545 | MS.gene35246:CDS |
TTAAACATCAAGCAGTGCCC+TGG | 0.506802 | 6.2:-1812678 | None:intergenic |
TTAAACATCAAGCAGTGCCC+TGG | 0.506802 | 6.2:-1819731 | None:intergenic |
AGGCTTCGTCAGCATATTGG+AGG | 0.507081 | 6.2:+1808820 | MS.gene35246:intron |
TGCGTGGATTAACACGTGTT+AGG | 0.510524 | 6.2:+1813187 | MS.gene35246:CDS |
TGCGTGGATTAACACGTGTT+AGG | 0.510524 | 6.2:+1820240 | MS.gene35246:CDS |
CACTTTAAACAAATTGAAGC+CGG | 0.510704 | 6.2:+1806745 | MS.gene35246:CDS |
ATCACAAGCGTATGCACTGC+AGG | 0.512893 | 6.2:+1815401 | MS.gene35246:CDS |
ATCACAAGCGTATGCACTGC+AGG | 0.512893 | 6.2:+1822453 | MS.gene35246:CDS |
TATGGATGCAAGCTTTGCAT+TGG | 0.514825 | 6.2:+1806550 | MS.gene35246:CDS |
CAGGTCCATGTTGAAGACAT+TGG | 0.517939 | 6.2:-1811562 | None:intergenic |
CAGGTCCATGTTGAAGACAT+TGG | 0.517939 | 6.2:-1818615 | None:intergenic |
TTCGAGATCAGTACAGAGAC+CGG | 0.519759 | 6.2:+1811433 | MS.gene35246:CDS |
TTCGAGATCAGTACAGAGAC+CGG | 0.519759 | 6.2:+1818486 | MS.gene35246:CDS |
AGGCTAAAGAGTATGATCAT+AGG | 0.520792 | 6.2:+1811220 | MS.gene35246:CDS |
AGGCTAAAGAGTATGATCAT+AGG | 0.520792 | 6.2:+1818276 | MS.gene35246:CDS |
TGAGTTTGGCAAGCCATGGC+AGG | 0.521679 | 6.2:+1814746 | MS.gene35246:CDS |
ACATGCAATTGCTTTGACAA+AGG | 0.526101 | 6.2:-1808688 | None:intergenic |
TGTCACTTCAATGCGCTCAA+AGG | 0.528916 | 6.2:-1808372 | None:intergenic |
TTGAAGCCGATGAATTGCCC+AGG | 0.531408 | 6.2:+1812660 | MS.gene35246:CDS |
TTGAAGCCGATGAATTGCCC+AGG | 0.531408 | 6.2:+1819713 | MS.gene35246:CDS |
CCCGATGGAAACGTGAAGGA+AGG | 0.532344 | 6.2:+1805383 | MS.gene35246:CDS |
AGCAATTCTCTGCCCTGTCT+CGG | 0.532632 | 6.2:+1815374 | MS.gene35246:CDS |
AGCAATTCTCTGCCCTGTCT+CGG | 0.532632 | 6.2:+1822426 | MS.gene35246:CDS |
CACCGGGTTCGATCATATAG+AGG | 0.533653 | 6.2:+1812702 | MS.gene35246:CDS |
CACCGGGTTCGATCATATAG+AGG | 0.533653 | 6.2:+1819755 | MS.gene35246:CDS |
GAATAATGCTCTTATTGCTA+AGG | 0.534470 | 6.2:+1805463 | MS.gene35246:CDS |
CTACGTGATATCCTGCTTGG+TGG | 0.537321 | 6.2:-1815895 | None:intergenic |
CTACGTGATATCCTGCTTGG+TGG | 0.537321 | 6.2:-1822948 | None:intergenic |
CAGTGCCCTGGGCAATTCAT+CGG | 0.538657 | 6.2:-1812666 | None:intergenic |
CAGTGCCCTGGGCAATTCAT+CGG | 0.538657 | 6.2:-1819719 | None:intergenic |
ATGGACCTGTGGGTGCAATC+TGG | 0.540479 | 6.2:+1811576 | MS.gene35246:CDS |
ATGGACCTGTGGGTGCAATC+TGG | 0.540479 | 6.2:+1818629 | MS.gene35246:CDS |
CCCACGTTTCAATATTTCCA+AGG | 0.541391 | 6.2:-1814689 | None:intergenic |
CCCACGTTTCAATATTTCCA+AGG | 0.541391 | 6.2:-1821741 | None:intergenic |
TGACAGGAAGATTCAGAAGA+AGG | 0.543532 | 6.2:+1815931 | MS.gene35246:CDS |
TGACAGGAAGATTCAGAAGA+AGG | 0.543532 | 6.2:+1822984 | MS.gene35246:CDS |
CATCTACGTGATATCCTGCT+TGG | 0.543677 | 6.2:-1815898 | None:intergenic |
CATCTACGTGATATCCTGCT+TGG | 0.543677 | 6.2:-1822951 | None:intergenic |
GCGTTCAACTGATCCTAGAA+TGG | 0.546660 | 6.2:-1822341 | None:intergenic |
CTTGTGATTTCTCCGAGACA+GGG | 0.546988 | 6.2:-1815386 | None:intergenic |
CTTGTGATTTCTCCGAGACA+GGG | 0.546988 | 6.2:-1822438 | None:intergenic |
GGCCCTTCTGGCTCAGTCCT+CGG | 0.548591 | 6.2:+1815349 | MS.gene35246:CDS |
GGCCCTTCTGGCTCAGTCCT+CGG | 0.548591 | 6.2:+1822401 | MS.gene35246:CDS |
TGGGTGAGTTTGACAAGCCA+TGG | 0.551843 | 6.2:+1821794 | MS.gene35246:CDS |
ACGTGTTAGGAGATTTCAGC+AGG | 0.553676 | 6.2:+1813200 | MS.gene35246:CDS |
ACGTGTTAGGAGATTTCAGC+AGG | 0.553676 | 6.2:+1820253 | MS.gene35246:CDS |
AAGGATGTATTAGGAATATG+AGG | 0.553799 | 6.2:-1808669 | None:intergenic |
TGAGTTTGACAAGCCATGGC+AGG | 0.555703 | 6.2:+1821798 | MS.gene35246:CDS |
GACATGATCGATGAAGTTCA+AGG | 0.560855 | 6.2:-1813696 | None:intergenic |
GACATGATCGATGAAGTTCA+AGG | 0.560855 | 6.2:-1820749 | None:intergenic |
AAAGCGCATCCAAATCTTCG+AGG | 0.560974 | 6.2:+1805295 | MS.gene35246:CDS |
GCTTTGGGATTGTGGCGGCT+AGG | 0.560989 | 6.2:-1805277 | None:intergenic |
GTGTATCTGATGCATTGAGC+AGG | 0.561339 | 6.2:+1822115 | MS.gene35246:CDS |
TAGAGACCAGAGAAATACCT+TGG | 0.561414 | 6.2:+1814672 | MS.gene35246:intron |
TAGAGACCAGAGAAATACCT+TGG | 0.561414 | 6.2:+1821724 | MS.gene35246:intron |
GTGTATCTGATGCATTAAGC+AGG | 0.561892 | 6.2:+1815063 | MS.gene35246:CDS |
CATCTTGGTTGTTGGCGAAG+AGG | 0.562345 | 6.2:+1816384 | MS.gene35246:CDS |
CATCTTGGTTGTTGGCGAAG+AGG | 0.562345 | 6.2:+1823453 | MS.gene35246:CDS |
TGCCGAGGACTGAGCCAGAA+GGG | 0.562400 | 6.2:-1815351 | None:intergenic |
TGCCGAGGACTGAGCCAGAA+GGG | 0.562400 | 6.2:-1822403 | None:intergenic |
CTGTCCAAGAATATGAGCAC+TGG | 0.563801 | 6.2:-1805588 | None:intergenic |
CGAGATCAGATCCACCAAGC+AGG | 0.564561 | 6.2:+1815884 | MS.gene35246:CDS |
CGAGATCAGATCCACCAAGC+AGG | 0.564561 | 6.2:+1822937 | MS.gene35246:CDS |
AACGATGAATCTTCTTCAAG+AGG | 0.565992 | 6.2:-1805515 | None:intergenic |
TATTTCAGGAATATTTGCAT+CGG | 0.566663 | 6.2:+1811190 | MS.gene35246:intron |
TATTTCAGGAATATTTGCAT+CGG | 0.566663 | 6.2:+1818246 | MS.gene35246:intron |
GGCTTCGTCAGCATATTGGA+GGG | 0.567002 | 6.2:+1808821 | MS.gene35246:intron |
CCCCTCGTTGATTTGTGTCG+AGG | 0.568618 | 6.2:+1808645 | MS.gene35246:CDS |
CCGTTCAACAGATCCTAGAA+TGG | 0.568951 | 6.2:-1815289 | None:intergenic |
TTGCCGAGGACTGAGCCAGA+AGG | 0.570356 | 6.2:-1815352 | None:intergenic |
TTGCCGAGGACTGAGCCAGA+AGG | 0.570356 | 6.2:-1822404 | None:intergenic |
AAGTGTAACCTTAATCGGAT+CGG | 0.571063 | 6.2:-1805360 | None:intergenic |
TAAACATCAAGCAGTGCCCT+GGG | 0.571207 | 6.2:-1812677 | None:intergenic |
TAAACATCAAGCAGTGCCCT+GGG | 0.571207 | 6.2:-1819730 | None:intergenic |
GGCGAAGAGGAAGCTAAGAC+AGG | 0.572491 | 6.2:+1816397 | MS.gene35246:CDS |
GGCGAAGAGGAAGCTAAGAC+AGG | 0.572491 | 6.2:+1823466 | MS.gene35246:CDS |
GAAGGCTGAAGCTTCTCTCA+AGG | 0.573542 | 6.2:+1821765 | MS.gene35246:CDS |
AAACTCTGCAGTTGAATGAA+GGG | 0.574454 | 6.2:+1815006 | MS.gene35246:intron |
AAACTCTGCAGTTGAATGAA+GGG | 0.574454 | 6.2:+1822058 | MS.gene35246:intron |
AAACCCCAAAATCAGCAAAA+CGG | 0.576768 | 6.2:-1813137 | None:intergenic |
AAACCCCAAAATCAGCAAAA+CGG | 0.576768 | 6.2:-1820190 | None:intergenic |
TGTATGAGTTTGGCAAGCCA+TGG | 0.576792 | 6.2:+1814742 | MS.gene35246:CDS |
GACCTCTAGCATACCTGCCA+TGG | 0.576793 | 6.2:-1814759 | None:intergenic |
GACCTCTAGCATACCTGCCA+TGG | 0.576793 | 6.2:-1821811 | None:intergenic |
ACTTTACCTCTTGATAGCCC+CGG | 0.577228 | 6.2:-1811452 | None:intergenic |
ACTTTACCTCTTGATAGCCC+CGG | 0.577228 | 6.2:-1818505 | None:intergenic |
CACAACAGCTTTCAACACTC+CGG | 0.577431 | 6.2:-1806764 | None:intergenic |
ACTGCTTGATGTTTAAACAC+CGG | 0.577476 | 6.2:+1812685 | MS.gene35246:CDS |
ACTGCTTGATGTTTAAACAC+CGG | 0.577476 | 6.2:+1819738 | MS.gene35246:CDS |
ACTGTTATAGTCTTATCAGC+AGG | 0.578222 | 6.2:-1808609 | None:intergenic |
CCAGGTGAGTGTACGTGTCA+GGG | 0.579057 | 6.2:+1824350 | MS.gene35246:intron |
GAAGGCTGAAGATTCTCTCA+AGG | 0.579797 | 6.2:+1814713 | MS.gene35246:CDS |
CTTCGTCAGCATATTGGAGG+GGG | 0.582105 | 6.2:+1808823 | MS.gene35246:CDS |
AGAGGAAGCTAAGACAGGAC+AGG | 0.584811 | 6.2:+1816402 | MS.gene35246:CDS |
AGAGGAAGCTAAGACAGGAC+AGG | 0.584811 | 6.2:+1823471 | MS.gene35246:CDS |
TAAGTTGGAATTCTCAGCTG+AGG | 0.589792 | 6.2:+1815227 | MS.gene35246:CDS |
TAAGTTGGAATTCTCAGCTG+AGG | 0.589792 | 6.2:+1822279 | MS.gene35246:CDS |
CATGACCAGATTGCACCCAC+AGG | 0.589989 | 6.2:-1811581 | None:intergenic |
CATGACCAGATTGCACCCAC+AGG | 0.589989 | 6.2:-1818634 | None:intergenic |
TCGAGATCAGTACAGAGACC+GGG | 0.592145 | 6.2:+1811434 | MS.gene35246:CDS |
TCGAGATCAGTACAGAGACC+GGG | 0.592145 | 6.2:+1818487 | MS.gene35246:CDS |
AAATATTGAAACGTGGGAGA+AGG | 0.594497 | 6.2:+1814695 | MS.gene35246:CDS |
AAATATTGAAACGTGGGAGA+AGG | 0.594497 | 6.2:+1821747 | MS.gene35246:CDS |
ACCTCTCCTCTAGTAGTGCA+GGG | 0.601406 | 6.2:-1806574 | None:intergenic |
ACCTTGGAAATATTGAAACG+TGG | 0.605393 | 6.2:+1814688 | MS.gene35246:CDS |
ACCTTGGAAATATTGAAACG+TGG | 0.605393 | 6.2:+1821740 | MS.gene35246:CDS |
TCATGCGGCAAATTATAAAG+AGG | 0.609494 | 6.2:+1811599 | MS.gene35246:CDS |
TCATGCGGCAAATTATAAAG+AGG | 0.609494 | 6.2:+1818652 | MS.gene35246:CDS |
CCTTGGAAATATTGAAACGT+GGG | 0.610408 | 6.2:+1814689 | MS.gene35246:CDS |
CCTTGGAAATATTGAAACGT+GGG | 0.610408 | 6.2:+1821741 | MS.gene35246:CDS |
CCGATGGAAACGTGAAGGAA+GGG | 0.612023 | 6.2:+1805384 | MS.gene35246:CDS |
GTGTGTGTAGTCTCTTGAGA+CGG | 0.612057 | 6.2:+1806525 | MS.gene35246:intron |
CTAGGTAGGATTCGTCTTTG+GGG | 0.612170 | 6.2:-1805259 | None:intergenic |
TTAAGTTTGATGATGATGAA+GGG | 0.620692 | 6.2:+1805546 | MS.gene35246:CDS |
CGGAGTGTTGAAAGCTGTTG+TGG | 0.624616 | 6.2:+1806765 | MS.gene35246:CDS |
ATGTCTTCAACATGGACCTG+TGG | 0.626864 | 6.2:+1811565 | MS.gene35246:CDS |
ATGTCTTCAACATGGACCTG+TGG | 0.626864 | 6.2:+1818618 | MS.gene35246:CDS |
GGGCAGAGAATTGCTTGCCG+AGG | 0.628066 | 6.2:-1815366 | None:intergenic |
GGGCAGAGAATTGCTTGCCG+AGG | 0.628066 | 6.2:-1822418 | None:intergenic |
ACTATAACAGTGTACAGATG+TGG | 0.628180 | 6.2:+1808621 | MS.gene35246:CDS |
TAGATGCTGATACAACTGAC+AGG | 0.628481 | 6.2:+1815915 | MS.gene35246:CDS |
TAGATGCTGATACAACTGAC+AGG | 0.628481 | 6.2:+1822968 | MS.gene35246:CDS |
ATCTCACGCGCAATATCGAA+CGG | 0.628585 | 6.2:-1805425 | None:intergenic |
ATTAAGGTTACACTTCCCGA+TGG | 0.628911 | 6.2:+1805368 | MS.gene35246:CDS |
ATATTTGCATCGGCTTGACG+AGG | 0.628967 | 6.2:+1811200 | MS.gene35246:CDS |
ATATTTGCATCGGCTTGACG+AGG | 0.628967 | 6.2:+1818256 | MS.gene35246:CDS |
GCTTCGTCAGCATATTGGAG+GGG | 0.630416 | 6.2:+1808822 | MS.gene35246:CDS |
CCATTCTAGGATCTGTTGAA+CGG | 0.631761 | 6.2:+1815289 | MS.gene35246:CDS |
TGAAGCCGATGAATTGCCCA+GGG | 0.632118 | 6.2:+1812661 | MS.gene35246:CDS |
TGAAGCCGATGAATTGCCCA+GGG | 0.632118 | 6.2:+1819714 | MS.gene35246:CDS |
TGAGCGCATTGAAGTGACAC+GGG | 0.632284 | 6.2:+1808376 | MS.gene35246:CDS |
TACCTCTATATGATCGAACC+CGG | 0.633072 | 6.2:-1812704 | None:intergenic |
TACCTCTATATGATCGAACC+CGG | 0.633072 | 6.2:-1819757 | None:intergenic |
TTATTTATCATCATGACTGG+AGG | 0.636763 | 6.2:+1811265 | MS.gene35246:CDS |
TTATTTATCATCATGACTGG+AGG | 0.636763 | 6.2:+1818318 | MS.gene35246:CDS |
ATATGAACTGAAGCTTTCAA+CGG | 0.637180 | 6.2:+1813739 | MS.gene35246:CDS |
ATATGAACTGAAGCTTTCAA+CGG | 0.637180 | 6.2:+1820792 | MS.gene35246:CDS |
ACCCTGCACTACTAGAGGAG+AGG | 0.638069 | 6.2:+1806573 | MS.gene35246:CDS |
TGTCTTCAACATGGACCTGT+GGG | 0.638827 | 6.2:+1811566 | MS.gene35246:CDS |
TGTCTTCAACATGGACCTGT+GGG | 0.638827 | 6.2:+1818619 | MS.gene35246:CDS |
CAGAGACCGGGGCTATCAAG+AGG | 0.639033 | 6.2:+1811446 | MS.gene35246:CDS |
CAGAGACCGGGGCTATCAAG+AGG | 0.639033 | 6.2:+1818499 | MS.gene35246:CDS |
TTGCATCGAAATGAGGCCAG+TGG | 0.643531 | 6.2:+1813159 | MS.gene35246:CDS |
TTGCATCGAAATGAGGCCAG+TGG | 0.643531 | 6.2:+1820212 | MS.gene35246:CDS |
TTGTAGATCCGAGCACCATG+TGG | 0.643916 | 6.2:-1811393 | None:intergenic |
TTGTAGATCCGAGCACCATG+TGG | 0.643916 | 6.2:-1818446 | None:intergenic |
ATTGGACCCTGCACTACTAG+AGG | 0.644694 | 6.2:+1806568 | MS.gene35246:CDS |
GAGGCCAGTGGTGCCCTGCG+TGG | 0.645053 | 6.2:+1813171 | MS.gene35246:CDS |
GAGGCCAGTGGTGCCCTGCG+TGG | 0.645053 | 6.2:+1820224 | MS.gene35246:CDS |
AACTCTGCAGTTGAATGAAG+GGG | 0.646831 | 6.2:+1815007 | MS.gene35246:intron |
AACTCTGCAGTTGAATGAAG+GGG | 0.646831 | 6.2:+1822059 | MS.gene35246:intron |
TTGAGCGCATTGAAGTGACA+CGG | 0.648029 | 6.2:+1808375 | MS.gene35246:CDS |
TCCTCGACACAAATCAACGA+GGG | 0.649373 | 6.2:-1808646 | None:intergenic |
AACACGTGTTAATCCACGCA+GGG | 0.650810 | 6.2:-1813184 | None:intergenic |
AACACGTGTTAATCCACGCA+GGG | 0.650810 | 6.2:-1820237 | None:intergenic |
AAACCTGTAGAGTTGCACAC+TGG | 0.652434 | 6.2:-1815091 | None:intergenic |
AAACCTGTAGAGTTGCACAC+TGG | 0.652434 | 6.2:-1822143 | None:intergenic |
ATCACCCAATGTCTTCAACA+TGG | 0.656617 | 6.2:+1811557 | MS.gene35246:CDS |
ATCACCCAATGTCTTCAACA+TGG | 0.656617 | 6.2:+1818610 | MS.gene35246:CDS |
GTGGGTGCAATCTGGTCATG+CGG | 0.661772 | 6.2:+1811584 | MS.gene35246:CDS |
GTGGGTGCAATCTGGTCATG+CGG | 0.661772 | 6.2:+1818637 | MS.gene35246:CDS |
ACTTCCCGATGGAAACGTGA+AGG | 0.671910 | 6.2:+1805379 | MS.gene35246:CDS |
GATGCGCTTTGGGATTGTGG+CGG | 0.674198 | 6.2:-1805282 | None:intergenic |
GATCGGGAGAGAGTGAAAGA+CGG | 0.676465 | 6.2:-1805343 | None:intergenic |
CTGCAGTTGAATGAAGGGGA+TGG | 0.679115 | 6.2:+1815011 | MS.gene35246:intron |
CTGCAGTTGAATGAAGGGGA+TGG | 0.679115 | 6.2:+1822063 | MS.gene35246:intron |
TCTCAATAGTCATGACGCTG+TGG | 0.679671 | 6.2:-1824383 | None:intergenic |
CCAAAATCAGCAAAACGGAG+AGG | 0.680957 | 6.2:-1813132 | None:intergenic |
CCAAAATCAGCAAAACGGAG+AGG | 0.680957 | 6.2:-1820185 | None:intergenic |
TTCGTCAGCATATTGGAGGG+GGG | 0.691441 | 6.2:+1808824 | MS.gene35246:CDS |
CGAGATCAGTACAGAGACCG+GGG | 0.693823 | 6.2:+1811435 | MS.gene35246:CDS |
CGAGATCAGTACAGAGACCG+GGG | 0.693823 | 6.2:+1818488 | MS.gene35246:CDS |
TAACACGTGTTAATCCACGC+AGG | 0.704470 | 6.2:-1813185 | None:intergenic |
TAACACGTGTTAATCCACGC+AGG | 0.704470 | 6.2:-1820238 | None:intergenic |
GCTCGAACACTTCAAAGACG+AGG | 0.709351 | 6.2:+1824410 | MS.gene35246:CDS |
CCTCGACACAAATCAACGAG+GGG | 0.726336 | 6.2:-1808645 | None:intergenic |
GTCCTCGACACAAATCAACG+AGG | 0.758098 | 6.2:-1808647 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 1805245 | 1824449 | 1805245 | ID=MS.gene35246 |
chr6.2 | mRNA | 1805245 | 1824449 | 1805245 | ID=MS.gene35246.t1;Parent=MS.gene35246 |
chr6.2 | exon | 1805245 | 1805610 | 1805245 | ID=MS.gene35246.t1.exon1;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1805245 | 1805610 | 1805245 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1806535 | 1806594 | 1806535 | ID=MS.gene35246.t1.exon2;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1806535 | 1806594 | 1806535 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1806697 | 1806786 | 1806697 | ID=MS.gene35246.t1.exon3;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1806697 | 1806786 | 1806697 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1808362 | 1808436 | 1808362 | ID=MS.gene35246.t1.exon4;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1808362 | 1808436 | 1808362 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1808588 | 1808716 | 1808588 | ID=MS.gene35246.t1.exon5;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1808588 | 1808716 | 1808588 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1808822 | 1808911 | 1808822 | ID=MS.gene35246.t1.exon6;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1808822 | 1808911 | 1808822 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1811198 | 1811286 | 1811198 | ID=MS.gene35246.t1.exon7;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1811198 | 1811286 | 1811198 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1811371 | 1811467 | 1811371 | ID=MS.gene35246.t1.exon8;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1811371 | 1811467 | 1811371 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1811552 | 1811638 | 1811552 | ID=MS.gene35246.t1.exon9;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1811552 | 1811638 | 1811552 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1812639 | 1812723 | 1812639 | ID=MS.gene35246.t1.exon10;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1812639 | 1812723 | 1812639 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1813127 | 1813221 | 1813127 | ID=MS.gene35246.t1.exon11;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1813127 | 1813221 | 1813127 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1813554 | 1813586 | 1813554 | ID=MS.gene35246.t1.exon12;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1813554 | 1813586 | 1813554 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1813674 | 1813760 | 1813674 | ID=MS.gene35246.t1.exon13;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1813674 | 1813760 | 1813674 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1814675 | 1814767 | 1814675 | ID=MS.gene35246.t1.exon14;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1814675 | 1814767 | 1814675 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1815017 | 1815109 | 1815017 | ID=MS.gene35246.t1.exon15;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1815017 | 1815109 | 1815017 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1815201 | 1815422 | 1815201 | ID=MS.gene35246.t1.exon16;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1815201 | 1815422 | 1815201 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1815881 | 1815952 | 1815881 | ID=MS.gene35246.t1.exon17;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1815881 | 1815952 | 1815881 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1816352 | 1816423 | 1816352 | ID=MS.gene35246.t1.exon18;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1816352 | 1816423 | 1816352 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1818254 | 1818339 | 1818254 | ID=MS.gene35246.t1.exon19;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1818254 | 1818339 | 1818254 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1818424 | 1818520 | 1818424 | ID=MS.gene35246.t1.exon20;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1818424 | 1818520 | 1818424 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1818605 | 1818691 | 1818605 | ID=MS.gene35246.t1.exon21;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1818605 | 1818691 | 1818605 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1819692 | 1819776 | 1819692 | ID=MS.gene35246.t1.exon22;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1819692 | 1819776 | 1819692 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1820180 | 1820274 | 1820180 | ID=MS.gene35246.t1.exon23;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1820180 | 1820274 | 1820180 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1820607 | 1820639 | 1820607 | ID=MS.gene35246.t1.exon24;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1820607 | 1820639 | 1820607 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1820727 | 1820813 | 1820727 | ID=MS.gene35246.t1.exon25;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1820727 | 1820813 | 1820727 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1821727 | 1821819 | 1821727 | ID=MS.gene35246.t1.exon26;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1821727 | 1821819 | 1821727 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1822069 | 1822161 | 1822069 | ID=MS.gene35246.t1.exon27;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1822069 | 1822161 | 1822069 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1822253 | 1822474 | 1822253 | ID=MS.gene35246.t1.exon28;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1822253 | 1822474 | 1822253 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1822934 | 1823005 | 1822934 | ID=MS.gene35246.t1.exon29;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1822934 | 1823005 | 1822934 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1823421 | 1823492 | 1823421 | ID=MS.gene35246.t1.exon30;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1823421 | 1823492 | 1823421 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
chr6.2 | exon | 1824354 | 1824449 | 1824354 | ID=MS.gene35246.t1.exon31;Parent=MS.gene35246.t1 |
chr6.2 | CDS | 1824354 | 1824449 | 1824354 | ID=cds.MS.gene35246.t1;Parent=MS.gene35246.t1 |
Gene Sequence |
Protein sequence |