AlfalfaGEDB | MS.gene28828

M. sativa cultivar XinJiangDaYe / MS.gene28828

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043565 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28828.t1	XP_003625994.2	95.8	288	11	1	1	288	9	295	1.30E-134	489.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28828.t1	O22900	53.0	183	66	5	122	288	159	337	3.1e-39	163.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28828.t1	G7KTN2	95.8	288	11	1	1	288	9	295	9.5e-135	489.2

TFs/TRs:

Gene ID	Type	Classification
MS.gene28828.t1	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050363	MS.gene28828	0.846719	1.82E-59	-1.69E-46
MS.gene050416	MS.gene28828	0.955115	6.36E-113	-1.69E-46
MS.gene052091	MS.gene28828	0.803942	2.74E-49	-1.69E-46
MS.gene053932	MS.gene28828	0.810584	1.07E-50	-1.69E-46
MS.gene054616	MS.gene28828	0.802543	5.34E-49	-1.69E-46
MS.gene055549	MS.gene28828	0.811605	6.44E-51	-1.69E-46
MS.gene055550	MS.gene28828	0.818585	1.82E-52	-1.69E-46
MS.gene056408	MS.gene28828	0.80521	1.49E-49	-1.69E-46
MS.gene06012	MS.gene28828	0.821146	4.72E-53	-1.69E-46
MS.gene060237	MS.gene28828	0.861238	1.18E-63	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28828.t1	MTR_7g109800	96.181	288	10	1	1	288	9	295	0.0	574
MS.gene28828.t1	MTR_1g086790	61.290	310	75	17	13	288	27	325	5.00e-93	278
MS.gene28828.t1	MTR_2g033820	40.777	309	129	11	26	288	72	372	3.14e-43	152
MS.gene28828.t1	MTR_5g043880	46.561	189	70	5	111	284	98	270	6.37e-41	143
MS.gene28828.t1	MTR_4g094588	48.276	174	71	6	124	285	165	331	1.19e-39	141
MS.gene28828.t1	MTR_5g091390	47.879	165	74	3	124	282	144	302	2.32e-39	140
MS.gene28828.t1	MTR_4g122530	65.854	82	28	0	121	202	192	273	3.67e-35	131
MS.gene28828.t1	MTR_3g104750	62.821	78	29	0	117	194	84	161	1.15e-31	115
MS.gene28828.t1	MTR_7g079010	46.528	144	55	3	60	194	68	198	1.88e-31	117
MS.gene28828.t1	MTR_7g028415	72.464	69	19	0	126	194	82	150	2.74e-31	115
MS.gene28828.t1	MTR_7g028710	72.464	69	19	0	126	194	82	150	2.74e-31	115
MS.gene28828.t1	MTR_7g011820	43.976	166	77	5	60	210	318	482	4.04e-31	121
MS.gene28828.t1	MTR_7g011820	44.681	94	36	2	122	200	198	290	6.07e-16	78.2
MS.gene28828.t1	MTR_5g042920	59.524	84	34	0	122	205	305	388	3.46e-30	118
MS.gene28828.t1	MTR_5g042920	61.290	62	21	2	137	196	151	211	6.60e-17	80.5
MS.gene28828.t1	MTR_1g015140	61.250	80	31	0	116	195	81	160	1.57e-29	110
MS.gene28828.t1	MTR_5g094430	60.227	88	34	1	121	208	214	300	1.62e-29	115
MS.gene28828.t1	MTR_5g094430	38.776	147	82	5	138	281	67	208	1.26e-17	82.8
MS.gene28828.t1	MTR_5g094430	60.227	88	34	1	121	208	236	322	2.31e-29	115
MS.gene28828.t1	MTR_5g094430	38.776	147	82	5	138	281	89	230	1.43e-17	82.4
MS.gene28828.t1	MTR_5g094430	60.227	88	34	1	121	208	348	434	4.20e-29	116
MS.gene28828.t1	MTR_5g094430	38.776	147	82	5	138	281	201	342	2.89e-17	82.0
MS.gene28828.t1	MTR_4g082580	62.025	79	30	0	124	202	265	343	1.07e-28	113
MS.gene28828.t1	MTR_4g082580	53.125	64	30	0	137	200	145	208	1.18e-15	76.6
MS.gene28828.t1	MTR_3g009470	62.069	87	32	1	121	207	479	564	1.09e-28	115
MS.gene28828.t1	MTR_3g009470	58.209	67	27	1	137	203	280	345	3.51e-17	82.0
MS.gene28828.t1	MTR_8g092010	42.424	132	69	2	73	202	47	173	1.27e-28	108
MS.gene28828.t1	MTR_3g095080	46.281	121	59	1	79	193	80	200	1.31e-28	109
MS.gene28828.t1	MTR_3g095080	46.281	121	59	1	79	193	104	224	1.84e-28	109
MS.gene28828.t1	MTR_3g056100	59.756	82	33	0	121	202	242	323	4.18e-28	112
MS.gene28828.t1	MTR_3g056100	57.812	64	26	1	137	200	99	161	6.16e-16	77.8
MS.gene28828.t1	MTR_3g056100	59.756	82	33	0	121	202	255	336	4.57e-28	112
MS.gene28828.t1	MTR_3g056100	57.812	64	26	1	137	200	99	161	5.92e-16	77.8
MS.gene28828.t1	MTR_8g007270	46.218	119	60	2	79	193	92	210	5.39e-28	108
MS.gene28828.t1	MTR_3g056100	59.756	82	33	0	121	202	386	467	9.26e-28	112
MS.gene28828.t1	MTR_3g056100	57.812	64	26	1	137	200	243	305	6.55e-16	78.2
MS.gene28828.t1	MTR_3g056100	59.756	82	33	0	121	202	399	480	1.00e-27	112
MS.gene28828.t1	MTR_3g056100	57.812	64	26	1	137	200	243	305	6.32e-16	78.2
MS.gene28828.t1	MTR_7g100510	60.526	76	30	0	122	197	346	421	1.75e-27	110
MS.gene28828.t1	MTR_7g100510	52.055	73	34	1	138	210	190	261	4.19e-17	81.3
MS.gene28828.t1	MTR_3g031220	44.776	134	60	2	76	196	292	424	8.93e-27	109
MS.gene28828.t1	MTR_3g031220	54.688	64	28	1	137	200	198	260	4.90e-16	78.2
MS.gene28828.t1	MTR_8g092140	63.514	74	26	1	121	193	143	216	1.27e-26	104
MS.gene28828.t1	MTR_7g071120	56.098	82	36	0	121	202	308	389	3.07e-26	107
MS.gene28828.t1	MTR_7g071120	48.315	89	38	2	137	225	166	246	5.37e-18	84.0
MS.gene28828.t1	MTR_4g013260	58.442	77	32	0	121	197	320	396	3.51e-26	107
MS.gene28828.t1	MTR_4g013260	47.778	90	41	2	137	224	184	269	1.36e-18	85.9
MS.gene28828.t1	MTR_5g074400	57.831	83	35	0	121	203	404	486	4.75e-26	107
MS.gene28828.t1	MTR_5g074400	55.000	60	26	1	137	196	243	301	1.29e-14	74.3
MS.gene28828.t1	MTR_7g080020	59.211	76	31	0	121	196	477	552	2.22e-25	106
MS.gene28828.t1	MTR_7g080020	58.209	67	27	1	137	203	280	345	8.99e-17	80.9
MS.gene28828.t1	MTR_8g096730	46.465	99	47	2	102	194	29	127	4.15e-25	98.2
MS.gene28828.t1	MTR_1g077780	51.899	79	38	0	118	196	43	121	4.23e-25	98.2
MS.gene28828.t1	MTR_3g095040	52.632	76	36	0	124	199	105	180	8.13e-25	99.0
MS.gene28828.t1	MTR_7g080000	57.895	76	32	0	121	196	416	491	9.33e-25	104
MS.gene28828.t1	MTR_7g080000	54.412	68	30	1	136	203	233	299	2.02e-15	76.6
MS.gene28828.t1	MTR_7g062220	40.132	152	77	5	137	281	124	268	1.23e-23	98.6
MS.gene28828.t1	MTR_4g132430	50.649	77	37	1	121	196	111	187	1.32e-22	96.3
MS.gene28828.t1	MTR_1g009613	36.364	143	85	5	56	193	178	319	2.20e-22	95.5
MS.gene28828.t1	MTR_2g023930	53.247	77	35	1	121	196	289	365	2.28e-22	97.1
MS.gene28828.t1	MTR_4g132430	50.649	77	37	1	121	196	245	321	3.58e-22	96.3
MS.gene28828.t1	MTR_2g105060	49.383	81	38	2	119	196	74	154	4.22e-22	92.8
MS.gene28828.t1	MTR_2g105060	49.383	81	38	2	119	196	149	229	8.34e-22	93.2
MS.gene28828.t1	MTR_5g097490	56.000	75	33	0	122	196	237	311	1.39e-21	93.6
MS.gene28828.t1	MTR_5g097490	50.000	60	29	1	137	196	92	150	4.05e-11	63.2
MS.gene28828.t1	MTR_7g110720	45.652	92	45	2	121	207	200	291	1.47e-21	94.0
MS.gene28828.t1	MTR_7g110720	45.652	92	45	2	121	207	173	264	1.49e-21	94.0
MS.gene28828.t1	MTR_2g088000	45.652	92	44	2	121	206	333	424	2.06e-21	94.4
MS.gene28828.t1	MTR_5g016610	48.193	83	42	1	112	193	174	256	2.15e-21	91.3
MS.gene28828.t1	MTR_3g053330	43.617	94	50	2	121	211	235	328	3.04e-21	93.6
MS.gene28828.t1	MTR_4g094412	48.718	78	39	1	121	197	218	295	4.07e-21	93.2
MS.gene28828.t1	MTR_4g094412	48.718	78	39	1	121	197	227	304	4.21e-21	93.2
MS.gene28828.t1	MTR_2g045360	38.158	152	72	7	121	266	195	330	9.15e-21	91.7
MS.gene28828.t1	MTR_6g086555	40.196	102	50	2	124	214	193	294	1.01e-20	91.7
MS.gene28828.t1	MTR_4g130900	38.655	119	73	0	79	197	301	419	1.03e-20	92.0
MS.gene28828.t1	MTR_4g107970	41.748	103	51	2	96	197	145	239	3.66e-20	90.5
MS.gene28828.t1	MTR_4g107970	41.748	103	51	2	96	197	222	316	3.98e-20	90.5
MS.gene28828.t1	MTR_1g078260	48.750	80	39	2	124	202	234	312	1.77e-19	88.2
MS.gene28828.t1	MTR_7g009730	41.237	97	48	2	99	194	189	277	3.49e-19	87.8
MS.gene28828.t1	MTR_4g049790	36.184	152	62	6	62	205	261	385	4.60e-19	87.4
MS.gene28828.t1	MTR_4g094908	47.619	84	42	2	112	193	240	323	6.93e-19	85.5
MS.gene28828.t1	MTR_4g007060	43.878	98	44	4	118	204	99	196	1.09e-18	84.3
MS.gene28828.t1	MTR_8g028565	40.206	97	56	2	102	196	119	215	1.34e-18	84.7
MS.gene28828.t1	MTR_4g049760	42.697	89	46	2	122	205	275	363	1.39e-18	85.9
MS.gene28828.t1	MTR_4g007060	43.878	98	44	4	118	204	133	230	1.56e-18	84.3
MS.gene28828.t1	MTR_4g127040	40.449	89	52	1	112	199	220	308	2.12e-18	84.0
MS.gene28828.t1	MTR_1g013760	55.000	60	26	1	135	193	138	197	2.53e-18	83.2
MS.gene28828.t1	MTR_3g106060	50.000	72	33	2	135	203	136	207	1.07e-17	81.6
MS.gene28828.t1	MTR_7g109600	47.761	67	34	1	138	203	54	120	2.03e-17	80.5
MS.gene28828.t1	MTR_7g079040	45.679	81	42	2	138	216	155	235	2.66e-17	80.9
MS.gene28828.t1	MTR_3g009470	58.209	67	27	1	137	203	280	345	3.32e-17	81.6
MS.gene28828.t1	MTR_1g070455	45.946	74	39	1	121	193	277	350	3.35e-17	80.9
MS.gene28828.t1	MTR_8g087000	41.379	87	49	2	138	223	77	162	4.31e-17	79.0
MS.gene28828.t1	MTR_8g087000	41.860	86	48	2	138	222	78	162	4.47e-17	79.0
MS.gene28828.t1	MTR_2g032030	43.564	101	51	3	101	196	228	327	5.80e-17	80.9
MS.gene28828.t1	MTR_2g032030	43.564	101	51	3	101	196	228	327	6.21e-17	80.9
MS.gene28828.t1	MTR_8g098945	46.154	78	40	2	136	211	128	205	9.42e-17	78.6
MS.gene28828.t1	MTR_3g108960	46.341	82	42	2	113	193	291	371	1.12e-16	79.7
MS.gene28828.t1	MTR_1g013790	44.872	78	40	2	136	210	100	177	2.54e-16	77.0
MS.gene28828.t1	MTR_3g031220	54.688	64	28	1	137	200	198	260	2.57e-16	78.6
MS.gene28828.t1	MTR_8g099350	36.296	135	76	5	65	192	59	190	3.22e-15	75.5
MS.gene28828.t1	MTR_5g029850	60.345	58	23	0	97	154	11	68	5.43e-15	68.9
MS.gene28828.t1	MTR_2g016770	50.000	60	29	1	138	196	36	95	5.97e-15	72.8
MS.gene28828.t1	MTR_2g016770	50.000	60	29	1	138	196	28	87	6.55e-15	72.4
MS.gene28828.t1	MTR_5g074200	43.158	95	47	3	137	225	220	313	9.24e-15	73.6
MS.gene28828.t1	MTR_7g117200	40.206	97	54	2	99	192	81	176	1.97e-14	72.8
MS.gene28828.t1	MTR_0117s0040	43.689	103	50	5	92	193	36	131	2.07e-14	71.6
MS.gene28828.t1	MTR_2g024380	30.597	134	90	2	68	200	184	315	4.56e-14	72.4
MS.gene28828.t1	MTR_2g083870	50.820	61	29	1	138	197	81	141	4.61e-14	70.9
MS.gene28828.t1	MTR_1g099600	50.000	60	29	1	138	196	186	245	6.23e-14	71.2
MS.gene28828.t1	MTR_8g027860	41.176	85	46	2	111	192	111	194	8.16e-14	71.2
MS.gene28828.t1	MTR_2g075750	50.000	60	27	1	136	192	27	86	1.22e-13	68.2
MS.gene28828.t1	MTR_8g067650	40.230	87	50	2	118	202	319	405	1.44e-13	70.9
MS.gene28828.t1	MTR_8g069935	38.298	94	56	2	111	202	304	397	1.55e-13	70.9
MS.gene28828.t1	MTR_3g090860	51.667	60	26	1	136	192	132	191	1.65e-13	70.1
MS.gene28828.t1	MTR_2g075610	50.847	59	26	1	136	191	28	86	2.53e-13	67.4
MS.gene28828.t1	MTR_2g075680	40.000	90	46	2	111	192	117	206	2.70e-13	69.3
MS.gene28828.t1	MTR_2g075700	48.333	60	28	1	136	192	143	202	3.92e-13	68.9
MS.gene28828.t1	MTR_5g097500	42.667	75	43	0	122	196	215	289	5.21e-13	68.6
MS.gene28828.t1	MTR_2g024350	45.902	61	32	1	137	196	8	68	5.26e-13	67.4
MS.gene28828.t1	MTR_7g073430	50.847	59	26	1	137	192	122	180	6.94e-13	67.8
MS.gene28828.t1	MTR_4g047580	37.500	80	49	1	122	200	266	345	7.30e-13	68.9
MS.gene28828.t1	MTR_8g067635	47.761	67	34	1	137	202	349	415	9.07e-13	68.6
MS.gene28828.t1	MTR_5g067680	38.000	100	51	2	137	233	202	293	2.00e-12	67.0
MS.gene28828.t1	MTR_8g032510	39.560	91	47	3	112	196	96	184	3.26e-12	65.9
MS.gene28828.t1	MTR_7g073380	46.667	60	29	1	136	192	122	181	8.66e-12	64.7
MS.gene28828.t1	MTR_5g067700	34.127	126	71	5	97	215	71	191	1.19e-11	63.5
MS.gene28828.t1	MTR_5g044695	53.488	43	20	0	121	163	61	103	1.65e-11	60.5
MS.gene28828.t1	MTR_6g053200	26.946	167	91	5	43	196	242	390	2.23e-11	64.3
MS.gene28828.t1	MTR_5g018380	44.068	59	31	1	136	194	122	178	4.29e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28828.t1	AT2G47260	53.361	238	84	6	75	288	103	337	4.78e-62	199
MS.gene28828.t1	AT1G29860	48.295	176	69	3	121	288	120	281	2.52e-46	157
MS.gene28828.t1	AT3G62340	36.278	317	120	13	4	288	10	276	2.01e-44	152
MS.gene28828.t1	AT4G18170	67.647	102	30	1	100	201	138	236	7.34e-44	152
MS.gene28828.t1	AT5G49520	48.469	196	77	5	109	284	193	384	4.75e-43	152
MS.gene28828.t1	AT1G69310	46.286	175	84	3	110	284	120	284	4.23e-41	144
MS.gene28828.t1	AT1G69310	46.286	175	84	3	110	284	120	284	4.23e-41	144
MS.gene28828.t1	AT1G69310	46.286	175	84	3	110	284	120	284	4.23e-41	144
MS.gene28828.t1	AT5G46350	45.455	165	81	2	124	288	170	325	4.63e-39	139
MS.gene28828.t1	AT1G69310	44.000	175	84	4	110	284	120	280	1.61e-35	129
MS.gene28828.t1	AT5G13080	70.423	71	21	0	124	194	54	124	3.30e-31	114
MS.gene28828.t1	AT2G03340	42.177	147	79	3	63	206	341	484	4.94e-31	121
MS.gene28828.t1	AT2G03340	60.000	60	23	1	137	196	250	308	2.87e-16	79.0
MS.gene28828.t1	AT3G01970	69.014	71	22	0	123	193	51	121	6.08e-31	113
MS.gene28828.t1	AT5G41570	59.140	93	35	2	103	194	65	155	9.56e-31	114
MS.gene28828.t1	AT1G13960	61.538	91	35	0	122	212	241	331	2.20e-30	117
MS.gene28828.t1	AT1G13960	60.000	60	23	1	137	196	76	134	1.82e-16	79.0
MS.gene28828.t1	AT4G39410	55.238	105	45	2	110	213	195	298	5.78e-30	115
MS.gene28828.t1	AT1G13960	68.056	72	23	0	122	193	394	465	6.31e-30	118
MS.gene28828.t1	AT1G13960	60.000	60	23	1	137	196	229	287	1.67e-16	79.7
MS.gene28828.t1	AT1G64000	69.014	71	22	0	124	194	101	171	1.08e-29	111
MS.gene28828.t1	AT5G07100	44.800	125	68	1	78	201	81	205	3.49e-29	110
MS.gene28828.t1	AT5G07100	49.275	69	35	0	137	205	24	92	1.45e-15	74.3
MS.gene28828.t1	AT5G07100	44.800	125	68	1	78	201	81	205	3.49e-29	110
MS.gene28828.t1	AT5G07100	49.275	69	35	0	137	205	24	92	1.45e-15	74.3
MS.gene28828.t1	AT5G07100	44.800	125	68	1	78	201	81	205	3.49e-29	110
MS.gene28828.t1	AT5G07100	49.275	69	35	0	137	205	24	92	1.45e-15	74.3
MS.gene28828.t1	AT5G07100	44.800	125	68	1	78	201	81	205	3.49e-29	110
MS.gene28828.t1	AT5G07100	49.275	69	35	0	137	205	24	92	1.45e-15	74.3
MS.gene28828.t1	AT2G46130	62.338	77	29	0	118	194	11	87	7.09e-29	106
MS.gene28828.t1	AT2G44745	44.776	134	63	2	60	193	79	201	8.77e-29	110
MS.gene28828.t1	AT4G26640	42.763	152	79	3	59	203	120	270	8.90e-29	113
MS.gene28828.t1	AT4G26640	54.930	71	31	1	137	207	35	104	1.70e-16	79.3
MS.gene28828.t1	AT4G26640	42.763	152	79	3	59	203	120	270	8.90e-29	113
MS.gene28828.t1	AT4G26640	54.930	71	31	1	137	207	35	104	1.70e-16	79.3
MS.gene28828.t1	AT4G26640	42.763	152	79	3	59	203	120	270	8.90e-29	113
MS.gene28828.t1	AT4G26640	54.930	71	31	1	137	207	35	104	1.70e-16	79.3
MS.gene28828.t1	AT4G26640	42.763	152	79	3	59	203	120	270	8.90e-29	113
MS.gene28828.t1	AT4G26640	54.930	71	31	1	137	207	35	104	1.70e-16	79.3
MS.gene28828.t1	AT5G07100	44.800	125	68	1	78	201	174	298	1.01e-28	112
MS.gene28828.t1	AT5G07100	49.275	69	35	0	137	205	117	185	2.74e-15	75.1
MS.gene28828.t1	AT4G26640	42.763	152	79	3	59	203	224	374	1.54e-28	114
MS.gene28828.t1	AT4G26640	54.930	71	31	1	137	207	139	208	2.38e-16	79.3
MS.gene28828.t1	AT4G26640	42.763	152	79	3	59	203	256	406	1.55e-28	114
MS.gene28828.t1	AT4G26640	54.930	71	31	1	137	207	171	240	2.63e-16	79.3
MS.gene28828.t1	AT4G26640	42.763	152	79	3	59	203	296	446	2.32e-28	114
MS.gene28828.t1	AT4G26640	54.930	71	31	1	137	207	211	280	2.66e-16	79.3
MS.gene28828.t1	AT3G01080	55.056	89	40	0	108	196	315	403	4.66e-28	112
MS.gene28828.t1	AT3G01080	52.941	68	31	1	137	204	205	271	6.66e-16	77.8
MS.gene28828.t1	AT3G01080	55.056	89	40	0	108	196	277	365	5.98e-28	112
MS.gene28828.t1	AT3G01080	52.941	68	31	1	137	204	167	233	7.57e-16	77.4
MS.gene28828.t1	AT2G38470	56.818	88	38	0	118	205	343	430	1.47e-27	111
MS.gene28828.t1	AT2G38470	48.750	80	39	2	117	196	165	242	1.16e-15	77.4
MS.gene28828.t1	AT5G26170	60.563	71	28	0	123	193	99	169	2.92e-27	104
MS.gene28828.t1	AT4G26440	59.551	89	35	1	121	209	356	443	3.06e-27	111
MS.gene28828.t1	AT4G26440	49.315	73	36	1	137	209	178	249	3.00e-15	76.3
MS.gene28828.t1	AT5G56270	61.842	76	29	0	121	196	471	546	2.83e-26	108
MS.gene28828.t1	AT5G56270	55.224	67	29	1	137	203	273	338	2.10e-15	76.6
MS.gene28828.t1	AT2G04880	61.333	75	29	0	122	196	268	342	3.71e-26	107
MS.gene28828.t1	AT2G04880	56.452	62	26	1	136	197	110	170	2.77e-16	79.0
MS.gene28828.t1	AT2G04880	61.333	75	29	0	122	196	292	366	4.75e-26	107
MS.gene28828.t1	AT2G04880	56.452	62	26	1	136	197	110	170	3.26e-16	79.0
MS.gene28828.t1	AT5G64810	50.000	82	41	0	112	193	85	166	1.65e-25	100
MS.gene28828.t1	AT2G21900	51.765	85	36	2	117	196	84	168	8.90e-25	99.0
MS.gene28828.t1	AT1G55600	42.991	107	57	1	90	196	264	366	1.17e-24	103
MS.gene28828.t1	AT2G37260	46.018	113	46	2	113	225	244	341	1.21e-24	101
MS.gene28828.t1	AT2G37260	44.792	96	48	3	138	229	84	178	3.14e-16	78.2
MS.gene28828.t1	AT2G37260	46.018	113	46	2	113	225	246	343	1.27e-24	101
MS.gene28828.t1	AT2G37260	44.792	96	48	3	138	229	86	180	3.04e-16	78.2
MS.gene28828.t1	AT2G37260	46.018	113	46	2	113	225	326	423	2.73e-24	101
MS.gene28828.t1	AT2G37260	44.792	96	48	3	138	229	166	260	4.87e-16	78.2
MS.gene28828.t1	AT4G04450	48.936	94	45	2	121	211	182	275	7.52e-24	100
MS.gene28828.t1	AT2G30250	54.878	82	37	0	121	202	312	393	1.99e-23	99.0
MS.gene28828.t1	AT2G30250	34.337	166	97	4	81	239	113	273	1.18e-13	70.9
MS.gene28828.t1	AT2G46130	57.143	77	29	1	118	194	11	83	2.04e-23	92.4
MS.gene28828.t1	AT4G04450	48.936	94	45	2	121	211	276	369	2.33e-23	99.8
MS.gene28828.t1	AT1G68150	30.220	182	110	4	33	197	115	296	7.14e-23	97.1
MS.gene28828.t1	AT2G30590	47.619	84	43	1	112	194	288	371	2.98e-21	92.8
MS.gene28828.t1	AT1G62300	47.619	84	43	1	114	196	289	372	3.13e-21	93.6
MS.gene28828.t1	AT4G22070	50.649	77	37	1	121	196	281	357	3.64e-21	93.6
MS.gene28828.t1	AT4G22070	50.649	77	37	1	121	196	281	357	3.64e-21	93.6
MS.gene28828.t1	AT4G22070	50.649	77	37	1	121	196	281	357	3.64e-21	93.6
MS.gene28828.t1	AT4G22070	50.649	77	37	1	121	196	281	357	3.64e-21	93.6
MS.gene28828.t1	AT4G01720	50.649	77	37	1	121	196	223	299	1.93e-20	91.3
MS.gene28828.t1	AT4G31550	38.095	105	63	2	91	193	198	302	2.86e-20	89.4
MS.gene28828.t1	AT4G31550	38.679	106	62	3	91	193	198	303	9.54e-20	87.8
MS.gene28828.t1	AT4G31800	48.000	75	38	1	136	209	110	184	1.23e-19	86.3
MS.gene28828.t1	AT4G31800	48.000	75	38	1	136	209	175	249	2.15e-19	86.7
MS.gene28828.t1	AT2G25000	52.857	70	32	1	136	204	102	171	3.15e-19	84.7
MS.gene28828.t1	AT2G25000	52.857	70	32	1	136	204	102	171	3.15e-19	84.7
MS.gene28828.t1	AT4G30935	56.667	60	26	0	138	197	332	391	3.70e-19	87.4
MS.gene28828.t1	AT1G80840	53.226	62	28	1	136	196	145	206	3.98e-19	85.9
MS.gene28828.t1	AT5G43290	61.404	57	22	0	137	193	114	170	4.14e-19	85.1
MS.gene28828.t1	AT2G25000	52.857	70	32	1	136	204	124	193	5.06e-19	84.7
MS.gene28828.t1	AT1G30650	45.098	102	50	3	101	197	178	278	5.41e-19	86.7
MS.gene28828.t1	AT1G18860	46.753	77	40	1	121	196	223	299	6.67e-19	87.0
MS.gene28828.t1	AT2G25000	52.857	70	32	1	136	204	145	214	7.60e-19	84.3
MS.gene28828.t1	AT5G15130	41.489	94	50	2	117	205	165	258	8.89e-19	86.3
MS.gene28828.t1	AT5G15130	41.489	94	50	2	117	205	207	300	9.47e-19	86.3
MS.gene28828.t1	AT2G24570	40.000	100	58	2	101	198	206	305	1.74e-18	84.3
MS.gene28828.t1	AT4G24240	44.578	83	45	1	112	193	256	338	3.81e-18	83.6
MS.gene28828.t1	AT2G23320	45.783	83	44	1	112	193	215	297	5.08e-18	82.8
MS.gene28828.t1	AT1G29280	52.381	63	29	1	138	199	75	137	7.85e-18	81.6
MS.gene28828.t1	AT5G52830	47.126	87	39	3	111	196	145	225	1.06e-17	82.4
MS.gene28828.t1	AT5G28650	40.217	92	54	1	112	202	237	328	1.64e-17	81.6
MS.gene28828.t1	AT3G04670	40.217	92	54	1	112	202	237	328	1.83e-17	81.6
MS.gene28828.t1	AT4G01250	55.000	60	26	1	138	196	129	188	9.22e-17	79.0
MS.gene28828.t1	AT5G45050	38.889	108	60	4	96	198	1108	1214	1.36e-16	80.5
MS.gene28828.t1	AT5G45050	38.889	108	60	4	96	198	1136	1242	1.43e-16	80.5
MS.gene28828.t1	AT5G45050	38.889	108	60	4	96	198	997	1103	1.44e-16	80.5
MS.gene28828.t1	AT2G34830	55.000	60	26	1	138	196	225	284	1.55e-16	79.7
MS.gene28828.t1	AT2G34830	55.000	60	26	1	138	196	216	275	1.56e-16	79.7
MS.gene28828.t1	AT3G01080	58.333	60	24	1	137	196	205	263	3.65e-16	77.8
MS.gene28828.t1	AT3G58710	35.714	126	66	4	86	196	5	130	1.15e-15	75.5
MS.gene28828.t1	AT3G58710	42.857	91	47	2	111	196	41	131	1.54e-15	75.1
MS.gene28828.t1	AT1G69810	37.391	115	66	4	97	209	106	216	2.53e-15	75.5
MS.gene28828.t1	AT1G69810	37.391	115	66	4	97	209	164	274	2.82e-15	75.9
MS.gene28828.t1	AT4G23550	43.529	85	46	2	132	214	135	219	1.74e-14	72.8
MS.gene28828.t1	AT2G46400	37.079	89	53	1	110	195	77	165	9.59e-14	70.5
MS.gene28828.t1	AT1G66560	49.153	59	27	1	137	192	103	161	1.82e-13	68.9
MS.gene28828.t1	AT4G11070	41.758	91	49	2	105	192	78	167	4.54e-13	68.6
MS.gene28828.t1	AT4G11070	41.758	91	49	2	105	192	110	199	6.63e-13	68.2
MS.gene28828.t1	AT4G12020	52.542	59	27	1	138	196	469	526	8.25e-13	69.3
MS.gene28828.t1	AT4G12020	70.270	37	11	0	121	157	625	661	1.57e-11	65.5
MS.gene28828.t1	AT4G12020	52.542	59	27	1	138	196	469	526	8.25e-13	69.3
MS.gene28828.t1	AT4G12020	70.270	37	11	0	121	157	625	661	1.57e-11	65.5
MS.gene28828.t1	AT4G12020	45.714	70	37	1	135	204	466	534	8.46e-13	69.3
MS.gene28828.t1	AT4G12020	70.270	37	11	0	121	157	625	661	1.61e-11	65.5
MS.gene28828.t1	AT4G12020	45.714	70	37	1	135	204	466	534	8.54e-13	69.3
MS.gene28828.t1	AT4G12020	70.270	37	11	0	121	157	625	661	1.70e-11	65.1
MS.gene28828.t1	AT4G12020	45.714	70	37	1	135	204	466	534	8.78e-13	68.9
MS.gene28828.t1	AT4G12020	70.270	37	11	0	121	157	625	661	1.58e-11	65.5
MS.gene28828.t1	AT4G12020	52.542	59	27	1	138	196	469	526	9.06e-13	68.9
MS.gene28828.t1	AT4G12020	70.270	37	11	0	121	157	625	661	1.71e-11	65.1
MS.gene28828.t1	AT4G12020	50.000	62	30	1	135	196	466	526	9.32e-13	68.9
MS.gene28828.t1	AT4G12020	70.270	37	11	0	121	157	625	661	1.72e-11	65.1
MS.gene28828.t1	AT4G12020	50.000	62	30	1	135	196	466	526	9.32e-13	68.9
MS.gene28828.t1	AT4G12020	70.270	37	11	0	121	157	625	661	1.72e-11	65.1
MS.gene28828.t1	AT4G12020	50.000	62	30	1	135	196	466	526	9.55e-13	68.9
MS.gene28828.t1	AT4G12020	70.270	37	11	0	121	157	625	661	1.72e-11	65.1
MS.gene28828.t1	AT4G12020	47.761	67	34	1	138	204	402	467	9.77e-13	68.9
MS.gene28828.t1	AT4G12020	70.270	37	11	0	121	157	558	594	1.82e-11	65.1
MS.gene28828.t1	AT4G12020	46.377	69	36	1	135	203	466	533	1.02e-12	68.9
MS.gene28828.t1	AT4G12020	70.270	37	11	0	121	157	625	661	1.83e-11	65.1
MS.gene28828.t1	AT3G56400	38.372	86	47	2	110	192	96	178	1.55e-12	67.0
MS.gene28828.t1	AT5G24110	34.259	108	58	4	110	212	84	183	3.19e-12	66.2
MS.gene28828.t1	AT1G66550	39.759	83	44	2	138	214	104	186	4.90e-12	65.1
MS.gene28828.t1	AT2G40740	46.479	71	35	1	137	204	182	252	6.11e-12	65.5
MS.gene28828.t1	AT1G66550	39.759	83	44	2	138	214	109	191	6.34e-12	64.7
MS.gene28828.t1	AT2G40740	45.833	72	36	1	137	205	173	244	6.41e-12	65.1
MS.gene28828.t1	AT5G45260	37.349	83	49	1	117	196	1188	1270	1.74e-11	65.1
MS.gene28828.t1	AT4G23810	49.153	59	27	1	137	192	158	216	3.72e-11	63.2
MS.gene28828.t1	AT5G22570	48.276	58	27	1	138	192	111	168	4.25e-11	62.8
MS.gene28828.t1	AT2G40750	47.458	59	28	1	137	192	152	210	7.04e-11	62.4

Find 67 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTCAATACATTGTCGTCTT+TGG	0.201669	7.4:-5618304	MS.gene28828:CDS
TGTTGAGTTGATTATTAATT+TGG	0.211689	7.4:+5619368	None:intergenic
AAGGAGCTTCATGGAGTTAT+TGG	0.217692	7.4:-5619596	MS.gene28828:CDS
GAAGAAGAACGAGACATAAT+TGG	0.261796	7.4:+5618441	None:intergenic
ATGGAGGATTATTCGAATAT+TGG	0.275837	7.4:-5619667	MS.gene28828:CDS
GATGCTGCTGACTATAATAT+TGG	0.280170	7.4:+5618337	None:intergenic
TTCAATACATTGTCGTCTTT+GGG	0.295835	7.4:-5618303	MS.gene28828:CDS
AATTATGTCTCGTTCTTCTT+CGG	0.363102	7.4:-5618439	MS.gene28828:CDS
GATGAAGAGTTAGGAGTGGC+AGG	0.379102	7.4:+5619445	None:intergenic
GGTTGTAAAGGAACCACCTT+TGG	0.394614	7.4:-5619521	MS.gene28828:CDS
GAACGAGACATAATTGGGTT+TGG	0.394670	7.4:+5618447	None:intergenic
ATCTGAAGAAAGGAGCTTCA+TGG	0.399237	7.4:-5619605	MS.gene28828:CDS
AGGAGCTTCATGGAGTTATT+GGG	0.399801	7.4:-5619595	MS.gene28828:CDS
GAAAAGCGAGGTGGATCATC+TGG	0.414478	7.4:-5618829	MS.gene28828:CDS
GATGAAATAGATGAAGAGTT+AGG	0.420106	7.4:+5619436	None:intergenic
TATTGGACTGACCTTGGAAA+GGG	0.432987	7.4:+5618756	None:intergenic
GCTGAATGCACCACCAACTT+TGG	0.436903	7.4:-5618384	MS.gene28828:CDS
TGTGGTTGGTATTAGGTTGA+AGG	0.452689	7.4:-5618904	MS.gene28828:intron
GTAGCATTCATATTCTTTGA+AGG	0.456358	7.4:+5618276	None:intergenic
TCTTCTTCGGCTGTTCGTGC+CGG	0.460798	7.4:-5618426	MS.gene28828:CDS
AAGAAGAACGAGACATAATT+GGG	0.464348	7.4:+5618442	None:intergenic
AGGCCATTGTCCTGTACCCT+TGG	0.466063	7.4:+5618225	None:intergenic
TGTTTGATTTATCTGAAGAA+AGG	0.471881	7.4:-5619615	MS.gene28828:CDS
TGTTCCTTCACATATGTTCA+AGG	0.476657	7.4:-5618190	MS.gene28828:CDS
TAGGTTGTTACAACAATGGC+TGG	0.477731	7.4:+5618489	None:intergenic
ATGCTGCTGACTATAATATT+GGG	0.483227	7.4:+5618338	None:intergenic
AAAGCGATTCTAGCTTCTCT+TGG	0.486828	7.4:+5618858	None:intergenic
TAGCATTCATATTCTTTGAA+GGG	0.492165	7.4:+5618277	None:intergenic
GAGGTGGATCATCTGGAAGA+TGG	0.513204	7.4:-5618822	MS.gene28828:CDS
ACACTTGGAAATGAGTAGCT+AGG	0.516517	7.4:+5619637	None:intergenic
CTTCACATTACATGAAACAC+TGG	0.528954	7.4:+5618539	None:intergenic
CCATTCCCATCACTCTCCAA+AGG	0.531548	7.4:+5619505	None:intergenic
CACTTGGAAATGAGTAGCTA+GGG	0.534179	7.4:+5619638	None:intergenic
TGGTGGTGGTAATAGAGATC+CGG	0.534417	7.4:+5618407	None:intergenic
ATCTGGAAGATGGGTACAGA+TGG	0.534825	7.4:-5618812	MS.gene28828:CDS
ATGTGTGTGCTTTCCTTCGT+AGG	0.535338	7.4:+5618470	None:intergenic
GGTGGTTCCTTTACAACCAC+AGG	0.538122	7.4:+5619526	None:intergenic
TTGATCAGAACCAAAGTTGG+TGG	0.538546	7.4:+5618374	None:intergenic
TGATTTGCCTGTGGTTGTAA+AGG	0.540038	7.4:-5619533	MS.gene28828:CDS
AACCACCTTTGGAGAGTGAT+GGG	0.545230	7.4:-5619510	MS.gene28828:CDS
AGAGACCACTTTGTAATCCA+AGG	0.545703	7.4:-5618242	MS.gene28828:CDS
AAGTTGGTGGTGCATTCAGC+TGG	0.549478	7.4:+5618387	None:intergenic
GAACCACCTTTGGAGAGTGA+TGG	0.558173	7.4:-5619511	MS.gene28828:CDS
GTGGTGCATTCAGCTGGTGG+TGG	0.564170	7.4:+5618393	None:intergenic
AAGGAACAACATCTTGAAGA+AGG	0.565496	7.4:+5618205	None:intergenic
AGGTGGATCATCTGGAAGAT+GGG	0.567407	7.4:-5618821	MS.gene28828:CDS
ACTTTGTAATCCAAGGGTAC+AGG	0.572303	7.4:-5618235	MS.gene28828:CDS
GGGTACAGATGGAGAAAGTA+CGG	0.573593	7.4:-5618801	MS.gene28828:CDS
TCAGATAAATCAAACACACT+TGG	0.573947	7.4:+5619622	None:intergenic
TTCGTAGGTTGTTACAACAA+TGG	0.575559	7.4:+5618485	None:intergenic
ATATTGGACTGACCTTGGAA+AGG	0.575592	7.4:+5618755	None:intergenic
TAGTTTACTTGATTTGCCTG+TGG	0.610972	7.4:-5619542	MS.gene28828:CDS
TTGGTGGTGCATTCAGCTGG+TGG	0.617490	7.4:+5618390	None:intergenic
AATAGATGAAGAGTTAGGAG+TGG	0.618477	7.4:+5619441	None:intergenic
TCCTCCTTGAACATATGTGA+AGG	0.619921	7.4:+5618186	None:intergenic
TGTACCCTTGGATTACAAAG+TGG	0.631750	7.4:+5618237	None:intergenic
TTCCCATCACTCTCCAAAGG+TGG	0.633730	7.4:+5619508	None:intergenic
ATTGGACTGACCTTGGAAAG+GGG	0.644385	7.4:+5618757	None:intergenic
GAGACCACTTTGTAATCCAA+GGG	0.645369	7.4:-5618241	MS.gene28828:CDS
AATCCAAGGGTACAGGACAA+TGG	0.650442	7.4:-5618228	MS.gene28828:CDS
GAATGGAAAAGAGTGTTCAG+AGG	0.653706	7.4:-5619488	MS.gene28828:CDS
TCCTTCACATATGTTCAAGG+AGG	0.657130	7.4:-5618187	MS.gene28828:CDS
CGCTTTCATGACGAAAAGCG+AGG	0.659806	7.4:-5618841	MS.gene28828:CDS
CCTTTGGAGAGTGATGGGAA+TGG	0.667441	7.4:-5619505	MS.gene28828:CDS
TTTCATGACGAAAAGCGAGG+TGG	0.682863	7.4:-5618838	MS.gene28828:CDS
ATTGTTGTAACAACCTACGA+AGG	0.722353	7.4:-5618483	MS.gene28828:CDS
ATGTAATGTGAAGAAACACG+TGG	0.727622	7.4:-5618529	MS.gene28828:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAACTTTTAAAAACAAAAT+TGG	+	chr7.4:5618673-5618692	None:intergenic	10.0%
!!!	AAACTTTTAAAAACAAAATT+GGG	+	chr7.4:5618672-5618691	None:intergenic	10.0%
!!!	ATAAAATTATAGAAGTATAT+TGG	+	chr7.4:5619113-5619132	None:intergenic	10.0%
!!!	TCTCTTTTTTTTTTTTTTTA+TGG	-	chr7.4:5618567-5618586	MS.gene28828:intron	10.0%
!!!	TTTTTTTTTTTTTTATGGAA+GGG	-	chr7.4:5618572-5618591	MS.gene28828:intron	10.0%
!!!	TTTTTTTTTTTTTTTATGGA+AGG	-	chr7.4:5618571-5618590	MS.gene28828:intron	10.0%
!!	TATTAGGTAAAACAAAAAAA+AGG	-	chr7.4:5618610-5618629	MS.gene28828:intron	15.0%
!!!	ACATTAATTTGTTTGATTTT+TGG	-	chr7.4:5618834-5618853	MS.gene28828:CDS	15.0%
!!	ACATCTAAACATTTATAGAA+TGG	+	chr7.4:5618733-5618752	None:intergenic	20.0%
!!	TTAATAAAGGAAGAGATTAA+AGG	+	chr7.4:5619176-5619195	None:intergenic	20.0%
!!!	ATTTAATTTCTATGGTTTGT+GGG	-	chr7.4:5618916-5618935	MS.gene28828:intron	20.0%
!!!	CTAGTAAGATTTAATTTCTA+TGG	-	chr7.4:5618908-5618927	MS.gene28828:intron	20.0%
!!!	CTTTTCTTATGCTTTAATAA+AGG	+	chr7.4:5619189-5619208	None:intergenic	20.0%
!!!	GTAAAACAAAAAAAAGGTTT+TGG	-	chr7.4:5618616-5618635	MS.gene28828:intron	20.0%
!!!	TGTTGAGTTGATTATTAATT+TGG	+	chr7.4:5618484-5618503	None:intergenic	20.0%
!!!	TTTTAAAAACAAAATTGGGT+AGG	+	chr7.4:5618668-5618687	None:intergenic	20.0%
!	CTGTATCTATATGCATATAT+AGG	-	chr7.4:5619271-5619290	MS.gene28828:intron	25.0%
!	TAGCATTCATATTCTTTGAA+GGG	+	chr7.4:5619575-5619594	None:intergenic	25.0%
!!	GATTTAATTTCTATGGTTTG+TGG	-	chr7.4:5618915-5618934	MS.gene28828:intron	25.0%
!!	TGTTTGATTTATCTGAAGAA+AGG	-	chr7.4:5618234-5618253	MS.gene28828:CDS	25.0%
!!!	AAGGTTTTGGAATTTGATTA+TGG	-	chr7.4:5618629-5618648	MS.gene28828:intron	25.0%
!!!	AGGTTTTGGAATTTGATTAT+GGG	-	chr7.4:5618630-5618649	MS.gene28828:intron	25.0%
	AAAGGAAGCAAAATTGGAAA+GGG	+	chr7.4:5619158-5619177	None:intergenic	30.0%
	AAGAAGAACGAGACATAATT+GGG	+	chr7.4:5619410-5619429	None:intergenic	30.0%
	AATGTTATACGTATGCTACA+AGG	+	chr7.4:5618819-5618838	None:intergenic	30.0%
	AATTATGTCTCGTTCTTCTT+CGG	-	chr7.4:5619410-5619429	MS.gene28828:CDS	30.0%
	ATGGAGGATTATTCGAATAT+TGG	-	chr7.4:5618182-5618201	MS.gene28828:CDS	30.0%
	GAGATTAAAGGAAGCAAAAT+TGG	+	chr7.4:5619164-5619183	None:intergenic	30.0%
	GATGAAATAGATGAAGAGTT+AGG	+	chr7.4:5618416-5618435	None:intergenic	30.0%
	GTAGCATTCATATTCTTTGA+AGG	+	chr7.4:5619576-5619595	None:intergenic	30.0%
	TAAAGGAAGCAAAATTGGAA+AGG	+	chr7.4:5619159-5619178	None:intergenic	30.0%
	TCAGATAAATCAAACACACT+TGG	+	chr7.4:5618230-5618249	None:intergenic	30.0%
	TTCAATACATTGTCGTCTTT+GGG	-	chr7.4:5619546-5619565	MS.gene28828:CDS	30.0%
!	ATGCTGCTGACTATAATATT+GGG	+	chr7.4:5619514-5619533	None:intergenic	30.0%
!	GCAAAGATGGGATTTTTATT+AGG	-	chr7.4:5618594-5618613	MS.gene28828:intron	30.0%
	AAGGAACAACATCTTGAAGA+AGG	+	chr7.4:5619647-5619666	None:intergenic	35.0%
	AAGGAAGCAAAATTGGAAAG+GGG	+	chr7.4:5619157-5619176	None:intergenic	35.0%
	AATAGATGAAGAGTTAGGAG+TGG	+	chr7.4:5618411-5618430	None:intergenic	35.0%
	ATGTAATGTGAAGAAACACG+TGG	-	chr7.4:5619320-5619339	MS.gene28828:intron	35.0%
	ATTGTTGTAACAACCTACGA+AGG	-	chr7.4:5619366-5619385	MS.gene28828:CDS	35.0%
	CTTCAATACATTGTCGTCTT+TGG	-	chr7.4:5619545-5619564	MS.gene28828:CDS	35.0%
	CTTCACATTACATGAAACAC+TGG	+	chr7.4:5619313-5619332	None:intergenic	35.0%
	GAAGAAGAACGAGACATAAT+TGG	+	chr7.4:5619411-5619430	None:intergenic	35.0%
	TATACGTATGCTACAAGGTT+TGG	+	chr7.4:5618814-5618833	None:intergenic	35.0%
	TGTTCCTTCACATATGTTCA+AGG	-	chr7.4:5619659-5619678	MS.gene28828:CDS	35.0%
	TTAAAAATAGCCCCTTTCCA+AGG	-	chr7.4:5619082-5619101	MS.gene28828:intron	35.0%
	TTCGTAGGTTGTTACAACAA+TGG	+	chr7.4:5619367-5619386	None:intergenic	35.0%
!	GATCTAATGTGGTTGGTATT+AGG	-	chr7.4:5618938-5618957	MS.gene28828:intron	35.0%
!	GATGCTGCTGACTATAATAT+TGG	+	chr7.4:5619515-5619534	None:intergenic	35.0%
!	TTTTATGGAAGGGCAAAGAT+GGG	-	chr7.4:5618582-5618601	MS.gene28828:intron	35.0%
!	TTTTTATGGAAGGGCAAAGA+TGG	-	chr7.4:5618581-5618600	MS.gene28828:intron	35.0%
!!	GTTTTGATCAGAACCAAAGT+TGG	+	chr7.4:5619481-5619500	None:intergenic	35.0%
!!	TAGTTTACTTGATTTGCCTG+TGG	-	chr7.4:5618307-5618326	MS.gene28828:CDS	35.0%
	AAGGAGCTTCATGGAGTTAT+TGG	-	chr7.4:5618253-5618272	MS.gene28828:CDS	40.0%
	ACACTTGGAAATGAGTAGCT+AGG	+	chr7.4:5618215-5618234	None:intergenic	40.0%
	AGAGACCACTTTGTAATCCA+AGG	-	chr7.4:5619607-5619626	MS.gene28828:CDS	40.0%
	AGGAGCTTCATGGAGTTATT+GGG	-	chr7.4:5618254-5618273	MS.gene28828:CDS	40.0%
	ATATTGGACTGACCTTGGAA+AGG	+	chr7.4:5619097-5619116	None:intergenic	40.0%
	ATCTGAAGAAAGGAGCTTCA+TGG	-	chr7.4:5618244-5618263	MS.gene28828:CDS	40.0%
	CACTTGGAAATGAGTAGCTA+GGG	+	chr7.4:5618214-5618233	None:intergenic	40.0%
	GAACGAGACATAATTGGGTT+TGG	+	chr7.4:5619405-5619424	None:intergenic	40.0%
	GAAGTATATTGGACTGACCT+TGG	+	chr7.4:5619102-5619121	None:intergenic	40.0%
	GAGACCACTTTGTAATCCAA+GGG	-	chr7.4:5619608-5619627	MS.gene28828:CDS	40.0%
	TAGGTTGTTACAACAATGGC+TGG	+	chr7.4:5619363-5619382	None:intergenic	40.0%
	TATTGGACTGACCTTGGAAA+GGG	+	chr7.4:5619096-5619115	None:intergenic	40.0%
	TCCTCCTTGAACATATGTGA+AGG	+	chr7.4:5619666-5619685	None:intergenic	40.0%
	TCCTTCACATATGTTCAAGG+AGG	-	chr7.4:5619662-5619681	MS.gene28828:CDS	40.0%
	TGTACCCTTGGATTACAAAG+TGG	+	chr7.4:5619615-5619634	None:intergenic	40.0%
	TTGATCAGAACCAAAGTTGG+TGG	+	chr7.4:5619478-5619497	None:intergenic	40.0%
	TTTGTGGGATCTAATGTGGT+TGG	-	chr7.4:5618931-5618950	MS.gene28828:intron	40.0%
!	ACTTTGTAATCCAAGGGTAC+AGG	-	chr7.4:5619614-5619633	MS.gene28828:CDS	40.0%
!	ATGGTTTGTGGGATCTAATG+TGG	-	chr7.4:5618927-5618946	MS.gene28828:intron	40.0%
!	TGATTTGCCTGTGGTTGTAA+AGG	-	chr7.4:5618316-5618335	MS.gene28828:CDS	40.0%
!!	AAAGCGATTCTAGCTTCTCT+TGG	+	chr7.4:5618994-5619013	None:intergenic	40.0%
!!	GAATGGAAAAGAGTGTTCAG+AGG	-	chr7.4:5618361-5618380	MS.gene28828:CDS	40.0%
!!	TGTGGTTGGTATTAGGTTGA+AGG	-	chr7.4:5618945-5618964	MS.gene28828:intron	40.0%
	AGGTGGATCATCTGGAAGAT+GGG	-	chr7.4:5619028-5619047	MS.gene28828:intron	45.0%
	ATCTGGAAGATGGGTACAGA+TGG	-	chr7.4:5619037-5619056	MS.gene28828:intron	45.0%
	ATGTGTGTGCTTTCCTTCGT+AGG	+	chr7.4:5619382-5619401	None:intergenic	45.0%
	ATTGGACTGACCTTGGAAAG+GGG	+	chr7.4:5619095-5619114	None:intergenic	45.0%
	GGGTACAGATGGAGAAAGTA+CGG	-	chr7.4:5619048-5619067	MS.gene28828:intron	45.0%
	GGTTGTAAAGGAACCACCTT+TGG	-	chr7.4:5618328-5618347	MS.gene28828:CDS	45.0%
	TTTCATGACGAAAAGCGAGG+TGG	-	chr7.4:5619011-5619030	MS.gene28828:intron	45.0%
!	AACCACCTTTGGAGAGTGAT+GGG	-	chr7.4:5618339-5618358	MS.gene28828:CDS	45.0%
!	AATCCAAGGGTACAGGACAA+TGG	-	chr7.4:5619621-5619640	MS.gene28828:CDS	45.0%
!!	TGGTGGTGGTAATAGAGATC+CGG	+	chr7.4:5619445-5619464	None:intergenic	45.0%
	CCATTCCCATCACTCTCCAA+AGG	+	chr7.4:5618347-5618366	None:intergenic	50.0%
	CGCTTTCATGACGAAAAGCG+AGG	-	chr7.4:5619008-5619027	MS.gene28828:intron	50.0%
	GAAAAGCGAGGTGGATCATC+TGG	-	chr7.4:5619020-5619039	MS.gene28828:intron	50.0%
	GAGGTGGATCATCTGGAAGA+TGG	-	chr7.4:5619027-5619046	MS.gene28828:intron	50.0%
	GATGAAGAGTTAGGAGTGGC+AGG	+	chr7.4:5618407-5618426	None:intergenic	50.0%
	GCTGAATGCACCACCAACTT+TGG	-	chr7.4:5619465-5619484	MS.gene28828:CDS	50.0%
	GGTGGTTCCTTTACAACCAC+AGG	+	chr7.4:5618326-5618345	None:intergenic	50.0%
	TTCCCATCACTCTCCAAAGG+TGG	+	chr7.4:5618344-5618363	None:intergenic	50.0%
!	CCTTTGGAGAGTGATGGGAA+TGG	-	chr7.4:5618344-5618363	MS.gene28828:CDS	50.0%
!	GAACCACCTTTGGAGAGTGA+TGG	-	chr7.4:5618338-5618357	MS.gene28828:CDS	50.0%
!!	AAGTTGGTGGTGCATTCAGC+TGG	+	chr7.4:5619465-5619484	None:intergenic	50.0%
	AGGCCATTGTCCTGTACCCT+TGG	+	chr7.4:5619627-5619646	None:intergenic	55.0%
	TCTTCTTCGGCTGTTCGTGC+CGG	-	chr7.4:5619423-5619442	MS.gene28828:CDS	55.0%
!!	TTGGTGGTGCATTCAGCTGG+TGG	+	chr7.4:5619462-5619481	None:intergenic	55.0%
	GTGGTGCATTCAGCTGGTGG+TGG	+	chr7.4:5619459-5619478	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.4	gene	5618182	5619689	5618182	ID=MS.gene28828
chr7.4	mRNA	5618182	5619689	5618182	ID=MS.gene28828.t1;Parent=MS.gene28828
chr7.4	exon	5619364	5619689	5619364	ID=MS.gene28828.t1.exon1;Parent=MS.gene28828.t1
chr7.4	CDS	5619364	5619689	5619364	ID=cds.MS.gene28828.t1;Parent=MS.gene28828.t1
chr7.4	exon	5618768	5618911	5618768	ID=MS.gene28828.t1.exon2;Parent=MS.gene28828.t1
chr7.4	CDS	5618768	5618911	5618768	ID=cds.MS.gene28828.t1;Parent=MS.gene28828.t1
chr7.4	exon	5618182	5618578	5618182	ID=MS.gene28828.t1.exon3;Parent=MS.gene28828.t1
chr7.4	CDS	5618182	5618578	5618182	ID=cds.MS.gene28828.t1;Parent=MS.gene28828.t1

Gene Sequence

>MS.gene28828

ATGGAGGATTATTCGAATATTGGATCTTTCCCTAGCTACTCATTTCCAAGTGTGTTTGATTTATCTGAAGAAAGGAGCTTCATGGAGTTATTGGGTGTGCAGCAGAACATGAACAACTATAGTGATAGTTTACTTGATTTGCCTGTGGTTGTAAAGGAACCACCTTTGGAGAGTGATGGGAATGGAAAAGAGTGTTCAGAGGTTTTGAATAGTCAACAACAACCTGCCACTCCTAACTCTTCATCTATTTCATCTGCTTCTAGTGAAGCAATCAATGATGAACACAATAAAACTGTTGACCAAATTAATAATCAACTCAACAAACAGTGAGTTTCATTTTCTTCTTCTATTTTTATCTCTTTTTATCTTCTAGCAAGAATCTCTCTCTCTTTTTTTTTTTTTTTATGGAAGGGCAAAGATGGGATTTTTATTAGGTAAAACAAAAAAAAGGTTTTGGAATTTGATTATGGGCTTATTTTTTCACCTACCCAATTTTGTTTTTAAAAGTTTTGATTTCATGAATTATGACTGTCTTCATTATTTGTGTTCCATTCTATAAATGTTTAGATGTTGTGCGCAGTTGAGTTGAGATAAAAACATCTTTCTTTGCTTTTATTACAATGAGTGATCCAAACCTTGTAGCATACGTATAACATTAATTTGTTTGATTTTTGGAACATGTTTTTTTGACAAAGTTTGATACTTGAACAAAATGAATTAAGTTTTCTAGTAAGATTTAATTTCTATGGTTTGTGGGATCTAATGTGGTTGGTATTAGGTTGAAGGCTAAGAAGACAAATCAGAAGAGACCAAGAGAAGCTAGAATCGCTTTCATGACGAAAAGCGAGGTGGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTTAAAAATAGCCCCTTTCCAAGGTCAGTCCAATATACTTCTATAATTTTATTCATTCTTCAAAATACTACAACCCCTTTCCAATTTTGCTTCCTTTAATCTCTTCCTTTATTAAAGCATAAGAAAAGTAATATTATTGTGTTCAAATAAGAAATTTTAGTAATAATTTATTGATTAACGTTTGAACTAACTGTATCTATATGCATATATAGGAGCTATTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAACACGTGGAGAGATCTTTGAGTGATCCAGCCATTGTTGTAACAACCTACGAAGGAAAGCACACACATCCAAACCCAATTATGTCTCGTTCTTCTTCGGCTGTTCGTGCCGGATCTCTATTACCACCACCAGCTGAATGCACCACCAACTTTGGTTCTGATCAAAACTACAATATATCCCAATATTATAGTCAGCAGCATCAGCAAGTACTCTTCAATACATTGTCGTCTTTGGGTTTCCCTTCAAAGAATATGAATGCTACTTTTTCTCAAGAGAGACCACTTTGTAATCCAAGGGTACAGGACAATGGCCTTCTTCAAGATGTTGTTCCTTCACATATGTTCAAGGAGGAGTAG

Protein sequence

>MS.gene28828.t1

MEDYSNIGSFPSYSFPSVFDLSEERSFMELLGVQQNMNNYSDSLLDLPVVVKEPPLESDGNGKECSEVLNSQQQPATPNSSSISSASSEAINDEHNKTVDQINNQLNKQLKAKKTNQKRPREARIAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKHVERSLSDPAIVVTTYEGKHTHPNPIMSRSSSAVRAGSLLPPPAECTTNFGSDQNYNISQYYSQQHQQVLFNTLSSLGFPSKNMNATFSQERPLCNPRVQDNGLLQDVVPSHMFKEE