Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052091.t1 | XP_013465416.1 | 92.9 | 659 | 44 | 2 | 1 | 658 | 1 | 657 | 0.00E+00 | 1231.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052091.t1 | Q9XE58 | 39.3 | 760 | 344 | 15 | 7 | 658 | 17 | 767 | 3.6e-136 | 486.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052091.t1 | A0A072VCY3 | 92.9 | 659 | 44 | 2 | 1 | 658 | 1 | 657 | 0.0e+00 | 1231.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene052091.t1 | TF | GRAS |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049181 | MS.gene052091 | 0.825712 | 4.04E-54 | -1.69E-46 |
| MS.gene049457 | MS.gene052091 | 0.83445 | 2.98E-56 | -1.69E-46 |
| MS.gene051959 | MS.gene052091 | 0.821427 | 4.06E-53 | -1.69E-46 |
| MS.gene051960 | MS.gene052091 | 0.814878 | 1.23E-51 | -1.69E-46 |
| MS.gene052053 | MS.gene052091 | 0.807472 | 4.97E-50 | -1.69E-46 |
| MS.gene052089 | MS.gene052091 | 0.839737 | 1.32E-57 | -1.69E-46 |
| MS.gene052090 | MS.gene052091 | 0.854535 | 1.15E-61 | -1.69E-46 |
| MS.gene052091 | MS.gene053932 | 0.847203 | 1.34E-59 | -1.69E-46 |
| MS.gene052091 | MS.gene055549 | 0.834893 | 2.30E-56 | -1.69E-46 |
| MS.gene052091 | MS.gene055550 | 0.847659 | 1.01E-59 | -1.69E-46 |
| MS.gene052091 | MS.gene055551 | 0.831548 | 1.57E-55 | -1.69E-46 |
| MS.gene052091 | MS.gene056365 | 0.802243 | 6.15E-49 | -1.69E-46 |
| MS.gene052091 | MS.gene057001 | 0.804647 | 1.95E-49 | -1.69E-46 |
| MS.gene052091 | MS.gene06298 | 0.823732 | 1.18E-53 | -1.69E-46 |
| MS.gene052091 | MS.gene063782 | 0.803396 | 3.56E-49 | -1.69E-46 |
| MS.gene052091 | MS.gene064275 | 0.824845 | 6.47E-54 | -1.69E-46 |
| MS.gene052091 | MS.gene067477 | 0.80781 | 4.21E-50 | -1.69E-46 |
| MS.gene052091 | MS.gene070320 | 0.843269 | 1.55E-58 | -1.69E-46 |
| MS.gene052091 | MS.gene24099 | 0.854053 | 1.59E-61 | -1.69E-46 |
| MS.gene052091 | MS.gene25530 | 0.809944 | 1.47E-50 | -1.69E-46 |
| MS.gene052091 | MS.gene25741 | 0.823131 | 1.63E-53 | -1.69E-46 |
| MS.gene052091 | MS.gene26139 | 0.813892 | 2.03E-51 | -1.69E-46 |
| MS.gene052091 | MS.gene27099 | 0.848754 | 5.01E-60 | -1.69E-46 |
| MS.gene052091 | MS.gene28828 | 0.803942 | 2.74E-49 | -1.69E-46 |
| MS.gene052091 | MS.gene31091 | 0.809716 | 1.65E-50 | -1.69E-46 |
| MS.gene052091 | MS.gene31128 | 0.81259 | 3.93E-51 | -1.69E-46 |
| MS.gene052091 | MS.gene31129 | 0.855529 | 5.94E-62 | -1.69E-46 |
| MS.gene052091 | MS.gene31130 | 0.975012 | 3.53E-139 | -1.69E-46 |
| MS.gene052091 | MS.gene31868 | 0.864004 | 1.66E-64 | -1.69E-46 |
| MS.gene052091 | MS.gene33633 | 0.831457 | 1.65E-55 | -1.69E-46 |
| MS.gene052091 | MS.gene34636 | 0.81618 | 6.32E-52 | -1.69E-46 |
| MS.gene052091 | MS.gene36266 | 0.814725 | 1.33E-51 | -1.69E-46 |
| MS.gene052091 | MS.gene36830 | 0.824924 | 6.20E-54 | -1.69E-46 |
| MS.gene052091 | MS.gene38536 | 0.822378 | 2.45E-53 | -1.69E-46 |
| MS.gene052091 | MS.gene39380 | 0.802887 | 4.53E-49 | -1.69E-46 |
| MS.gene052091 | MS.gene40619 | 0.842033 | 3.31E-58 | -1.69E-46 |
| MS.gene052091 | MS.gene40620 | 0.837704 | 4.44E-57 | -1.69E-46 |
| MS.gene052091 | MS.gene41627 | 0.813063 | 3.09E-51 | -1.69E-46 |
| MS.gene052091 | MS.gene42130 | 0.849665 | 2.79E-60 | -1.69E-46 |
| MS.gene052091 | MS.gene42866 | 0.814549 | 1.46E-51 | -1.69E-46 |
| MS.gene052091 | MS.gene45521 | 0.84882 | 4.80E-60 | -1.69E-46 |
| MS.gene052091 | MS.gene45522 | 0.805211 | 1.49E-49 | -1.69E-46 |
| MS.gene052091 | MS.gene45523 | 0.800633 | 1.32E-48 | -1.69E-46 |
| MS.gene052091 | MS.gene46919 | 0.820402 | 6.99E-53 | -1.69E-46 |
| MS.gene052091 | MS.gene57332 | 0.821356 | 4.22E-53 | -1.69E-46 |
| MS.gene052091 | MS.gene57465 | 0.815173 | 1.06E-51 | -1.69E-46 |
| MS.gene052091 | MS.gene58691 | 0.822098 | 2.84E-53 | -1.69E-46 |
| MS.gene052091 | MS.gene61746 | 0.810682 | 1.02E-50 | -1.69E-46 |
| MS.gene052091 | MS.gene67236 | 0.811293 | 7.53E-51 | -1.69E-46 |
| MS.gene052091 | MS.gene67744 | 0.816743 | 4.72E-52 | -1.69E-46 |
| MS.gene052091 | MS.gene69210 | 0.822681 | 2.08E-53 | -1.69E-46 |
| MS.gene052091 | MS.gene69361 | 0.809277 | 2.05E-50 | -1.69E-46 |
| MS.gene052091 | MS.gene72157 | 0.842444 | 2.58E-58 | -1.69E-46 |
| MS.gene052091 | MS.gene72160 | 0.852322 | 4.98E-61 | -1.69E-46 |
| MS.gene052091 | MS.gene72178 | 0.854792 | 9.72E-62 | -1.69E-46 |
| MS.gene052091 | MS.gene72198 | 0.808907 | 2.46E-50 | -1.69E-46 |
| MS.gene052091 | MS.gene75508 | 0.804849 | 1.77E-49 | -1.69E-46 |
| MS.gene052091 | MS.gene76159 | 0.813664 | 2.28E-51 | -1.69E-46 |
| MS.gene052091 | MS.gene76423 | 0.803532 | 3.33E-49 | -1.69E-46 |
| MS.gene052091 | MS.gene77183 | 0.831259 | 1.85E-55 | -1.69E-46 |
| MS.gene052091 | MS.gene78383 | 0.815467 | 9.11E-52 | -1.69E-46 |
| MS.gene052091 | MS.gene78417 | 0.81114 | 8.12E-51 | -1.69E-46 |
| MS.gene052091 | MS.gene78418 | 0.82175 | 3.42E-53 | -1.69E-46 |
| MS.gene052091 | MS.gene78419 | 0.903509 | 3.22E-79 | -1.69E-46 |
| MS.gene052091 | MS.gene78745 | 0.813967 | 1.96E-51 | -1.69E-46 |
| MS.gene052091 | MS.gene79094 | 0.815402 | 9.41E-52 | -1.69E-46 |
| MS.gene052091 | MS.gene79201 | 0.814937 | 1.19E-51 | -1.69E-46 |
| MS.gene052091 | MS.gene81108 | 0.843365 | 1.47E-58 | -1.69E-46 |
| MS.gene052091 | MS.gene82042 | 0.808385 | 3.18E-50 | -1.69E-46 |
| MS.gene052091 | MS.gene82549 | 0.817811 | 2.72E-52 | -1.69E-46 |
| MS.gene052091 | MS.gene84704 | 0.808436 | 3.10E-50 | -1.69E-46 |
| MS.gene052091 | MS.gene85232 | 0.806114 | 9.63E-50 | -1.69E-46 |
| MS.gene052091 | MS.gene87017 | 0.834445 | 2.99E-56 | -1.69E-46 |
| MS.gene052091 | MS.gene87470 | 0.812104 | 5.01E-51 | -1.69E-46 |
| MS.gene052091 | MS.gene87798 | 0.838542 | 2.70E-57 | -1.69E-46 |
| MS.gene052091 | MS.gene88977 | 0.850491 | 1.64E-60 | -1.69E-46 |
| MS.gene052091 | MS.gene89082 | 0.823791 | 1.15E-53 | -1.69E-46 |
| MS.gene052091 | MS.gene90362 | 0.803788 | 2.95E-49 | -1.69E-46 |
| MS.gene052091 | MS.gene93160 | 0.816359 | 5.76E-52 | -1.69E-46 |
| MS.gene052091 | MS.gene93163 | 0.84421 | 8.71E-59 | -1.69E-46 |
| MS.gene052091 | MS.gene95714 | 0.863312 | 2.72E-64 | -1.69E-46 |
| MS.gene052091 | MS.gene95833 | 0.819898 | 9.12E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052091.t1 | MTR_2g097463 | 92.868 | 659 | 44 | 2 | 1 | 658 | 1 | 657 | 0.0 | 1253 |
| MS.gene052091.t1 | MTR_2g097467 | 81.487 | 659 | 118 | 3 | 1 | 658 | 1 | 656 | 0.0 | 1093 |
| MS.gene052091.t1 | MTR_2g097473 | 80.880 | 659 | 122 | 3 | 1 | 658 | 1 | 656 | 0.0 | 1092 |
| MS.gene052091.t1 | MTR_4g064200 | 57.722 | 641 | 205 | 12 | 38 | 658 | 58 | 652 | 0.0 | 692 |
| MS.gene052091.t1 | MTR_4g064160 | 43.004 | 679 | 325 | 13 | 33 | 658 | 17 | 686 | 0.0 | 530 |
| MS.gene052091.t1 | MTR_7g062120 | 43.407 | 675 | 313 | 12 | 49 | 658 | 72 | 742 | 2.28e-180 | 530 |
| MS.gene052091.t1 | MTR_4g064120 | 45.787 | 629 | 281 | 14 | 54 | 658 | 36 | 628 | 7.10e-168 | 494 |
| MS.gene052091.t1 | MTR_4g064150 | 43.548 | 682 | 317 | 15 | 29 | 658 | 70 | 735 | 1.29e-167 | 497 |
| MS.gene052091.t1 | MTR_4g064180 | 45.310 | 629 | 284 | 14 | 54 | 658 | 36 | 628 | 2.89e-164 | 485 |
| MS.gene052091.t1 | MTR_2g097410 | 51.288 | 466 | 213 | 5 | 201 | 658 | 284 | 743 | 2.26e-162 | 484 |
| MS.gene052091.t1 | MTR_2g097310 | 46.207 | 435 | 216 | 7 | 231 | 658 | 217 | 640 | 1.31e-134 | 409 |
| MS.gene052091.t1 | MTR_2g097390 | 45.958 | 433 | 221 | 5 | 231 | 658 | 219 | 643 | 1.31e-134 | 409 |
| MS.gene052091.t1 | MTR_2g097350 | 45.287 | 435 | 221 | 6 | 231 | 658 | 218 | 642 | 1.65e-132 | 404 |
| MS.gene052091.t1 | MTR_2g097380 | 48.634 | 366 | 158 | 5 | 294 | 658 | 227 | 563 | 4.79e-121 | 372 |
| MS.gene052091.t1 | MTR_5g097480 | 32.172 | 373 | 247 | 5 | 287 | 655 | 173 | 543 | 7.28e-55 | 196 |
| MS.gene052091.t1 | MTR_2g026250 | 29.144 | 374 | 260 | 3 | 286 | 655 | 223 | 595 | 5.16e-54 | 195 |
| MS.gene052091.t1 | MTR_2g082090 | 32.172 | 373 | 247 | 5 | 287 | 655 | 208 | 578 | 2.28e-52 | 190 |
| MS.gene052091.t1 | MTR_4g133660 | 29.167 | 384 | 257 | 6 | 282 | 656 | 166 | 543 | 9.67e-52 | 187 |
| MS.gene052091.t1 | MTR_1g029420 | 27.989 | 368 | 261 | 2 | 291 | 655 | 225 | 591 | 9.32e-49 | 180 |
| MS.gene052091.t1 | MTR_7g027190 | 27.949 | 390 | 249 | 4 | 286 | 655 | 295 | 672 | 2.15e-48 | 181 |
| MS.gene052091.t1 | MTR_3g089055 | 29.111 | 371 | 253 | 6 | 291 | 655 | 198 | 564 | 6.79e-48 | 177 |
| MS.gene052091.t1 | MTR_3g089055 | 29.111 | 371 | 253 | 6 | 291 | 655 | 203 | 569 | 7.79e-48 | 177 |
| MS.gene052091.t1 | MTR_3g056110 | 29.333 | 375 | 255 | 5 | 287 | 655 | 171 | 541 | 1.08e-47 | 176 |
| MS.gene052091.t1 | MTR_8g442410 | 28.974 | 390 | 248 | 6 | 286 | 658 | 150 | 527 | 2.39e-46 | 172 |
| MS.gene052091.t1 | MTR_5g094450 | 29.815 | 379 | 252 | 8 | 287 | 655 | 157 | 531 | 2.69e-46 | 172 |
| MS.gene052091.t1 | MTR_4g104020 | 27.532 | 385 | 251 | 7 | 288 | 655 | 146 | 519 | 9.78e-45 | 167 |
| MS.gene052091.t1 | MTR_7g074650 | 29.620 | 368 | 240 | 7 | 294 | 657 | 441 | 793 | 2.60e-43 | 167 |
| MS.gene052091.t1 | MTR_3g065980 | 28.535 | 389 | 247 | 7 | 284 | 655 | 165 | 539 | 1.93e-42 | 161 |
| MS.gene052091.t1 | MTR_4g102790 | 24.611 | 386 | 266 | 9 | 287 | 657 | 288 | 663 | 5.30e-38 | 150 |
| MS.gene052091.t1 | MTR_4g076140 | 25.995 | 427 | 248 | 6 | 291 | 655 | 48 | 468 | 2.46e-37 | 145 |
| MS.gene052091.t1 | MTR_2g034260 | 28.021 | 389 | 251 | 10 | 286 | 655 | 205 | 583 | 4.44e-37 | 146 |
| MS.gene052091.t1 | MTR_3g022830 | 26.859 | 417 | 245 | 7 | 292 | 655 | 26 | 435 | 8.02e-37 | 143 |
| MS.gene052091.t1 | MTR_2g034250 | 27.411 | 394 | 248 | 10 | 286 | 655 | 205 | 584 | 1.09e-35 | 142 |
| MS.gene052091.t1 | MTR_4g076020 | 26.790 | 377 | 232 | 9 | 294 | 658 | 87 | 431 | 1.55e-33 | 134 |
| MS.gene052091.t1 | MTR_2g089100 | 27.861 | 402 | 248 | 11 | 291 | 658 | 52 | 445 | 3.35e-33 | 133 |
| MS.gene052091.t1 | MTR_4g077760 | 25.729 | 377 | 259 | 7 | 288 | 655 | 190 | 554 | 9.90e-33 | 133 |
| MS.gene052091.t1 | MTR_7g109580 | 27.273 | 385 | 250 | 10 | 286 | 655 | 184 | 553 | 1.02e-30 | 127 |
| MS.gene052091.t1 | MTR_4g097080 | 23.873 | 377 | 272 | 7 | 291 | 657 | 133 | 504 | 1.54e-30 | 126 |
| MS.gene052091.t1 | MTR_1g096030 | 27.020 | 396 | 247 | 11 | 288 | 655 | 77 | 458 | 2.15e-30 | 125 |
| MS.gene052091.t1 | MTR_5g015490 | 25.197 | 381 | 268 | 7 | 291 | 657 | 114 | 491 | 3.09e-29 | 122 |
| MS.gene052091.t1 | MTR_2g034280 | 25.063 | 395 | 253 | 10 | 286 | 655 | 198 | 574 | 5.66e-29 | 122 |
| MS.gene052091.t1 | MTR_1g069725 | 26.984 | 378 | 249 | 13 | 286 | 655 | 104 | 462 | 6.84e-29 | 120 |
| MS.gene052091.t1 | MTR_3g072710 | 29.968 | 317 | 185 | 11 | 357 | 656 | 204 | 500 | 2.03e-27 | 117 |
| MS.gene052091.t1 | MTR_7g057230 | 28.137 | 263 | 179 | 5 | 395 | 655 | 402 | 656 | 1.22e-24 | 109 |
| MS.gene052091.t1 | MTR_5g009080 | 30.622 | 209 | 135 | 3 | 291 | 495 | 56 | 258 | 1.73e-24 | 107 |
| MS.gene052091.t1 | MTR_5g009080 | 28.859 | 149 | 106 | 0 | 507 | 655 | 329 | 477 | 1.11e-15 | 80.5 |
| MS.gene052091.t1 | MTR_1g086970 | 23.096 | 394 | 262 | 10 | 286 | 655 | 101 | 477 | 2.28e-24 | 107 |
| MS.gene052091.t1 | MTR_5g058860 | 24.791 | 359 | 240 | 11 | 318 | 656 | 149 | 497 | 8.45e-24 | 105 |
| MS.gene052091.t1 | MTR_5g015950 | 22.482 | 427 | 277 | 10 | 281 | 658 | 27 | 448 | 1.59e-23 | 104 |
| MS.gene052091.t1 | MTR_3g053270 | 22.482 | 427 | 277 | 10 | 281 | 658 | 27 | 448 | 1.59e-23 | 104 |
| MS.gene052091.t1 | MTR_6g047750 | 26.715 | 277 | 185 | 6 | 388 | 655 | 394 | 661 | 3.89e-23 | 104 |
| MS.gene052091.t1 | MTR_4g095500 | 22.837 | 416 | 269 | 9 | 291 | 658 | 59 | 470 | 5.94e-22 | 100 |
| MS.gene052091.t1 | MTR_2g099110 | 25.000 | 392 | 256 | 11 | 291 | 657 | 74 | 452 | 2.96e-21 | 97.8 |
| MS.gene052091.t1 | MTR_8g093070 | 23.707 | 464 | 289 | 21 | 235 | 658 | 60 | 498 | 7.45e-21 | 97.1 |
| MS.gene052091.t1 | MTR_0092s0100 | 21.739 | 368 | 271 | 6 | 292 | 655 | 373 | 727 | 2.40e-14 | 77.0 |
| MS.gene052091.t1 | MTR_0092s0100 | 21.739 | 368 | 271 | 6 | 292 | 655 | 376 | 730 | 2.41e-14 | 77.0 |
| MS.gene052091.t1 | MTR_4g026485 | 19.950 | 401 | 286 | 12 | 269 | 655 | 244 | 623 | 6.95e-13 | 72.0 |
| MS.gene052091.t1 | MTR_8g020840 | 21.446 | 401 | 255 | 12 | 291 | 655 | 171 | 547 | 8.56e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052091.t1 | AT2G29060 | 43.590 | 624 | 314 | 13 | 49 | 657 | 56 | 656 | 1.78e-165 | 489 |
| MS.gene052091.t1 | AT2G37650 | 41.667 | 660 | 326 | 12 | 42 | 657 | 58 | 702 | 1.96e-163 | 486 |
| MS.gene052091.t1 | AT2G37650 | 41.667 | 660 | 326 | 12 | 42 | 657 | 70 | 714 | 2.89e-163 | 486 |
| MS.gene052091.t1 | AT2G29060 | 42.373 | 649 | 323 | 13 | 49 | 657 | 56 | 693 | 3.71e-163 | 484 |
| MS.gene052091.t1 | AT1G07530 | 49.145 | 468 | 223 | 4 | 203 | 658 | 303 | 767 | 5.96e-161 | 481 |
| MS.gene052091.t1 | AT5G59450 | 45.336 | 536 | 255 | 8 | 154 | 658 | 72 | 600 | 4.11e-160 | 474 |
| MS.gene052091.t1 | AT3G46600 | 50.559 | 447 | 202 | 7 | 218 | 658 | 148 | 581 | 1.48e-148 | 443 |
| MS.gene052091.t1 | AT3G46600 | 50.559 | 447 | 202 | 7 | 218 | 658 | 116 | 549 | 1.66e-148 | 442 |
| MS.gene052091.t1 | AT2G29065 | 42.009 | 657 | 325 | 18 | 22 | 658 | 10 | 630 | 4.54e-148 | 444 |
| MS.gene052091.t1 | AT3G46600 | 54.839 | 372 | 162 | 2 | 291 | 658 | 4 | 373 | 1.44e-145 | 428 |
| MS.gene052091.t1 | AT1G07520 | 46.488 | 484 | 240 | 9 | 185 | 658 | 57 | 531 | 1.18e-137 | 413 |
| MS.gene052091.t1 | AT1G07520 | 46.488 | 484 | 240 | 9 | 185 | 658 | 57 | 531 | 1.18e-137 | 413 |
| MS.gene052091.t1 | AT1G07520 | 46.488 | 484 | 240 | 9 | 185 | 658 | 221 | 695 | 3.44e-136 | 415 |
| MS.gene052091.t1 | AT1G07520 | 46.488 | 484 | 240 | 9 | 185 | 658 | 222 | 696 | 3.66e-136 | 415 |
| MS.gene052091.t1 | AT1G50600 | 32.796 | 372 | 246 | 3 | 287 | 655 | 155 | 525 | 3.17e-54 | 194 |
| MS.gene052091.t1 | AT1G50600 | 32.796 | 372 | 246 | 3 | 287 | 655 | 226 | 596 | 1.22e-53 | 194 |
| MS.gene052091.t1 | AT1G50600 | 32.796 | 372 | 246 | 3 | 287 | 655 | 230 | 600 | 1.27e-53 | 194 |
| MS.gene052091.t1 | AT5G48150 | 30.105 | 382 | 262 | 3 | 278 | 655 | 109 | 489 | 1.02e-52 | 189 |
| MS.gene052091.t1 | AT5G48150 | 30.105 | 382 | 262 | 3 | 278 | 655 | 109 | 489 | 1.02e-52 | 189 |
| MS.gene052091.t1 | AT5G48150 | 30.105 | 382 | 262 | 3 | 278 | 655 | 109 | 489 | 1.02e-52 | 189 |
| MS.gene052091.t1 | AT5G48150 | 30.105 | 382 | 262 | 3 | 278 | 655 | 109 | 489 | 1.02e-52 | 189 |
| MS.gene052091.t1 | AT2G04890 | 29.839 | 372 | 250 | 4 | 287 | 655 | 49 | 412 | 3.36e-49 | 177 |
| MS.gene052091.t1 | AT4G17230 | 29.600 | 375 | 260 | 2 | 286 | 657 | 153 | 526 | 9.54e-47 | 173 |
| MS.gene052091.t1 | AT4G17230 | 29.600 | 375 | 260 | 2 | 286 | 657 | 153 | 526 | 9.54e-47 | 173 |
| MS.gene052091.t1 | AT1G21450 | 27.027 | 407 | 290 | 4 | 254 | 655 | 188 | 592 | 1.18e-45 | 171 |
| MS.gene052091.t1 | AT3G54220 | 31.283 | 374 | 229 | 11 | 294 | 657 | 296 | 651 | 1.62e-43 | 166 |
| MS.gene052091.t1 | AT3G03450 | 29.427 | 384 | 244 | 9 | 284 | 655 | 176 | 544 | 8.51e-43 | 162 |
| MS.gene052091.t1 | AT5G17490 | 27.586 | 435 | 290 | 10 | 229 | 655 | 98 | 515 | 1.36e-41 | 159 |
| MS.gene052091.t1 | AT1G66350 | 29.902 | 408 | 242 | 13 | 266 | 655 | 124 | 505 | 5.49e-41 | 157 |
| MS.gene052091.t1 | AT1G14920 | 28.877 | 374 | 250 | 9 | 286 | 655 | 167 | 528 | 1.48e-40 | 156 |
| MS.gene052091.t1 | AT5G66770 | 27.346 | 373 | 260 | 7 | 288 | 655 | 217 | 583 | 1.21e-39 | 154 |
| MS.gene052091.t1 | AT1G50420 | 24.885 | 434 | 251 | 6 | 288 | 655 | 54 | 478 | 2.83e-39 | 151 |
| MS.gene052091.t1 | AT2G01570 | 27.273 | 374 | 256 | 9 | 286 | 655 | 219 | 580 | 4.84e-37 | 146 |
| MS.gene052091.t1 | AT5G41920 | 26.546 | 388 | 251 | 8 | 281 | 655 | 33 | 399 | 1.08e-36 | 142 |
| MS.gene052091.t1 | AT1G63100 | 26.515 | 396 | 251 | 8 | 287 | 656 | 248 | 629 | 6.91e-34 | 137 |
| MS.gene052091.t1 | AT1G63100 | 26.515 | 396 | 251 | 8 | 287 | 656 | 273 | 654 | 8.08e-34 | 137 |
| MS.gene052091.t1 | AT3G50650 | 25.352 | 355 | 251 | 5 | 309 | 655 | 193 | 541 | 1.34e-33 | 135 |
| MS.gene052091.t1 | AT4G37650 | 25.255 | 392 | 263 | 8 | 290 | 657 | 145 | 530 | 3.67e-33 | 134 |
| MS.gene052091.t1 | AT4G08250 | 28.846 | 364 | 234 | 13 | 307 | 656 | 125 | 477 | 1.38e-30 | 126 |
| MS.gene052091.t1 | AT3G49950 | 26.562 | 384 | 261 | 9 | 291 | 657 | 30 | 409 | 3.50e-29 | 120 |
| MS.gene052091.t1 | AT5G52510 | 25.326 | 383 | 255 | 11 | 292 | 655 | 269 | 639 | 1.55e-28 | 121 |
| MS.gene052091.t1 | AT1G55580 | 24.289 | 387 | 227 | 10 | 320 | 655 | 73 | 444 | 1.81e-24 | 107 |
| MS.gene052091.t1 | AT3G13840 | 23.544 | 412 | 267 | 16 | 266 | 655 | 124 | 509 | 2.47e-15 | 79.7 |
| MS.gene052091.t1 | AT4G00150 | 21.839 | 435 | 285 | 13 | 235 | 655 | 160 | 553 | 3.60e-11 | 66.6 |
Find 137 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTGATCCAGATGGAAATTT+TGG | 0.205044 | 2.2:-5008964 | MS.gene052091:CDS |
| CATCGACTACAAAATCTTTA+TGG | 0.219672 | 2.2:+5007396 | None:intergenic |
| CCTGACCTGCCATTGCTTGT+AGG | 0.253220 | 2.2:+5007499 | None:intergenic |
| TCCAAGTACCATTCTGAAAA+TGG | 0.263904 | 2.2:+5008755 | None:intergenic |
| AGTGTTCATATTATTGATTT+TGG | 0.276562 | 2.2:-5008103 | MS.gene052091:CDS |
| AGGCAACACTCTTCGCCTTT+TGG | 0.276975 | 2.2:-5008334 | MS.gene052091:CDS |
| TATGTATCTGAGGATGTTAT+TGG | 0.308200 | 2.2:+5009128 | None:intergenic |
| TTCCTTCTTCACCATTGCTT+TGG | 0.317965 | 2.2:+5007421 | None:intergenic |
| AGCTTCCTCAGCCAGGATTT+AGG | 0.323032 | 2.2:-5007991 | MS.gene052091:CDS |
| CACTAAGCTGTAAATTGTAT+TGG | 0.330543 | 2.2:+5008138 | None:intergenic |
| GTATCATCATATGATGAATT+AGG | 0.332225 | 2.2:+5008988 | None:intergenic |
| TTTGTATGCTTTATCTGCTT+GGG | 0.337273 | 2.2:-5007333 | MS.gene052091:CDS |
| GTTACATGGTTCAATGAGTT+AGG | 0.343395 | 2.2:+5009237 | None:intergenic |
| CCCGTAATTCGAAGCTTTGC+AGG | 0.346583 | 2.2:+5008019 | None:intergenic |
| CGAATTTGACTCTTCCTACT+TGG | 0.356470 | 2.2:-5008860 | MS.gene052091:CDS |
| GTTTCCTCTGCCCTTTCTGC+AGG | 0.358323 | 2.2:+5007968 | None:intergenic |
| ACAACTGCATTGCACAGAAA+TGG | 0.365582 | 2.2:-5007895 | MS.gene052091:CDS |
| GCATCACATAATGTTGATTC+AGG | 0.366614 | 2.2:-5008508 | MS.gene052091:CDS |
| CTCTCAAGCATCAGCCTTTG+CGG | 0.367574 | 2.2:+5007593 | None:intergenic |
| TTGGATTAATCTTCCTGATC+AGG | 0.372735 | 2.2:+5007744 | None:intergenic |
| TTAGCTCATTACTTTGCTAA+TGG | 0.378914 | 2.2:-5008295 | MS.gene052091:CDS |
| GCAGAAAGGGCAGAGGAAAC+TGG | 0.381946 | 2.2:-5007965 | MS.gene052091:CDS |
| TCCTGCAAAGCTTCGAATTA+CGG | 0.385651 | 2.2:-5008020 | MS.gene052091:CDS |
| TCTGATTCGGTTAACCTTGT+TGG | 0.387152 | 2.2:-5008883 | MS.gene052091:CDS |
| CCTGCAAAGCTTCGAATTAC+GGG | 0.388387 | 2.2:-5008019 | MS.gene052091:CDS |
| TCTCAAGCATCAGCCTTTGC+GGG | 0.391520 | 2.2:+5007594 | None:intergenic |
| TCATTGAACCATGTAACAAA+TGG | 0.394328 | 2.2:-5009231 | MS.gene052091:CDS |
| GCGCAAACCCTGCATGTTGC+AGG | 0.405053 | 2.2:-5009070 | MS.gene052091:CDS |
| GAGCTAGGTTCAAGCAAATC+AGG | 0.411714 | 2.2:-5007469 | MS.gene052091:CDS |
| TTCTTCCATGGAGTTGTCAA+TGG | 0.415847 | 2.2:-5007716 | MS.gene052091:CDS |
| ATGCTTGAGAGAGGGTTGTT+TGG | 0.419092 | 2.2:-5007581 | MS.gene052091:CDS |
| TGCCATTGCTTGTAGGTCTC+AGG | 0.423545 | 2.2:+5007506 | None:intergenic |
| CAACATTATGTGATGCTTGT+TGG | 0.426130 | 2.2:+5008515 | None:intergenic |
| TTAGTAGAGCAAAACTACTA+TGG | 0.426979 | 2.2:-5008823 | MS.gene052091:CDS |
| AAATCTTGCAGAAAGGTGTT+AGG | 0.427722 | 2.2:+5009267 | None:intergenic |
| CATTGAACCATGTAACAAAT+GGG | 0.436405 | 2.2:-5009230 | MS.gene052091:CDS |
| ATGAGCTACTCAAGCAGATT+AGG | 0.437525 | 2.2:-5008354 | MS.gene052091:CDS |
| ATCGTTGTTTGATATGTTTG+AGG | 0.437931 | 2.2:-5007636 | MS.gene052091:CDS |
| CACAGAAATGGGAAACTATC+CGG | 0.438062 | 2.2:-5007883 | MS.gene052091:CDS |
| CAACTGCATTGCACAGAAAT+GGG | 0.438307 | 2.2:-5007894 | MS.gene052091:CDS |
| CCTACAAGCAATGGCAGGTC+AGG | 0.440693 | 2.2:-5007499 | MS.gene052091:CDS |
| AAGCATTGTTGAACCTGATC+AGG | 0.443595 | 2.2:-5007757 | MS.gene052091:CDS |
| AGGATTTAGGCCTGCAGAAA+GGG | 0.451557 | 2.2:-5007978 | MS.gene052091:CDS |
| TTCAGAATGGTACTTGGAGT+TGG | 0.458122 | 2.2:-5008750 | MS.gene052091:CDS |
| AGGTTCAACAATGCTTCTCT+TGG | 0.460604 | 2.2:+5007764 | None:intergenic |
| CTTTCTGCAGGCCTAAATCC+TGG | 0.464941 | 2.2:+5007980 | None:intergenic |
| ACTCAAACCCATTTGTTACA+TGG | 0.465056 | 2.2:+5009223 | None:intergenic |
| CATGGATGAAGAAGATGACT+TGG | 0.465816 | 2.2:-5009094 | MS.gene052091:CDS |
| GTGCTTCCCTAAACCGAGTC+AGG | 0.469223 | 2.2:+5007672 | None:intergenic |
| TTGAGAGAGGGTTGTTTGGA+AGG | 0.472118 | 2.2:-5007577 | MS.gene052091:CDS |
| AACTCAATGTGCACAGGCCG+TGG | 0.475370 | 2.2:-5008401 | MS.gene052091:CDS |
| TTCACTGCTACAGTTTCATC+AGG | 0.476635 | 2.2:+5007791 | None:intergenic |
| TAAACATTCCTGCAACATGC+AGG | 0.476644 | 2.2:+5009062 | None:intergenic |
| GGAATATCTATTCCCTGTGT+AGG | 0.479623 | 2.2:+5009149 | None:intergenic |
| TAGTCGATGTCGATGGTAAG+TGG | 0.481602 | 2.2:-5007382 | MS.gene052091:CDS |
| ATGCCACAGTTGTGGATTTG+TGG | 0.483676 | 2.2:-5008432 | MS.gene052091:CDS |
| CTGCTACAGTTTCATCAGGC+AGG | 0.484383 | 2.2:+5007795 | None:intergenic |
| TAATTCATGTGAGTCTGATT+CGG | 0.485201 | 2.2:-5008896 | MS.gene052091:CDS |
| CGCTGAAGTCCATCCCCAAA+AGG | 0.487864 | 2.2:+5008319 | None:intergenic |
| TACTTCTTTGTCAGCAAGGA+AGG | 0.488696 | 2.2:-5008552 | MS.gene052091:CDS |
| AGCAATGGCAGGTCAGGAAC+AGG | 0.489352 | 2.2:-5007493 | MS.gene052091:CDS |
| TGCTCAATGAGCACTGGATC+AGG | 0.490813 | 2.2:+5008790 | None:intergenic |
| AGTACCTCATCTAAGATCTC+TGG | 0.492137 | 2.2:+5008571 | None:intergenic |
| CGAAGCTTTGCAGGACCACC+AGG | 0.497005 | 2.2:+5008028 | None:intergenic |
| CCGCTTGATGTAGTAACTGC+TGG | 0.498718 | 2.2:-5008232 | MS.gene052091:CDS |
| AACCAAAGCAATGGTGAAGA+AGG | 0.500696 | 2.2:-5007423 | MS.gene052091:CDS |
| CGGCATATACGATGGAATCT+CGG | 0.504421 | 2.2:+5008252 | None:intergenic |
| AGCTTGTGAGGGTGCGGAGA+GGG | 0.504460 | 2.2:-5007537 | MS.gene052091:CDS |
| GTGCGGCCAAAATTTCCATC+TGG | 0.507021 | 2.2:+5008958 | None:intergenic |
| GGAATTGAGCTTCCTCAGCC+AGG | 0.513281 | 2.2:-5007998 | MS.gene052091:CDS |
| CAGGATTTAGGCCTGCAGAA+AGG | 0.516377 | 2.2:-5007979 | MS.gene052091:CDS |
| AGGTCAGGAACAGGAGAGCT+AGG | 0.516508 | 2.2:-5007484 | MS.gene052091:CDS |
| TCGAGGATCTAAAGATAGAC+AGG | 0.520782 | 2.2:-5007859 | MS.gene052091:CDS |
| AGCCTTTGCGGGTCTTCGCA+AGG | 0.523484 | 2.2:+5007605 | None:intergenic |
| AGGAGTTTGTAGTTCCAAGT+AGG | 0.525291 | 2.2:+5008846 | None:intergenic |
| GCTTGTTGCTCAATGAGCAC+TGG | 0.529649 | 2.2:+5008784 | None:intergenic |
| TGTAACAAATGGGTTTGAGT+TGG | 0.530549 | 2.2:-5009220 | MS.gene052091:CDS |
| GAAACCTCTTCAACCATCAC+TGG | 0.530989 | 2.2:+5008715 | None:intergenic |
| TCTGAGCTTATGACAGAAGA+AGG | 0.531044 | 2.2:+5009180 | None:intergenic |
| CCTTTGATCGTAGCTTGCCA+CGG | 0.533325 | 2.2:+5008384 | None:intergenic |
| CCGTGGCAAGCTACGATCAA+AGG | 0.538969 | 2.2:-5008384 | MS.gene052091:CDS |
| TGAGAGAGGGTTGTTTGGAA+GGG | 0.539295 | 2.2:-5007576 | MS.gene052091:CDS |
| GAATATCTATTCCCTGTGTA+GGG | 0.540588 | 2.2:+5009150 | None:intergenic |
| AACACTAAAATCTTGCAGAA+AGG | 0.548523 | 2.2:+5009260 | None:intergenic |
| TACAAACAATGCCACAGTTG+TGG | 0.553896 | 2.2:-5008440 | MS.gene052091:CDS |
| TCAGCCAGTGATGGTTGAAG+AGG | 0.554665 | 2.2:-5008719 | MS.gene052091:CDS |
| TAATGTTGATTCAGGAGGAA+AGG | 0.556753 | 2.2:-5008500 | MS.gene052091:CDS |
| GAATTTGCTATGGTTTCCAG+TGG | 0.556961 | 2.2:-5008081 | MS.gene052091:CDS |
| AGAAAAGAGAAGTCATGTGA+TGG | 0.557380 | 2.2:-5008674 | MS.gene052091:CDS |
| GCAATGCAGTTGTATTCAAA+TGG | 0.559815 | 2.2:+5007905 | None:intergenic |
| TGCCTTGCGAAGACCCGCAA+AGG | 0.561465 | 2.2:-5007607 | MS.gene052091:CDS |
| ATACATAAGCGACATCCTCA+TGG | 0.562884 | 2.2:-5009112 | MS.gene052091:CDS |
| TGTTATAGCTTGTGAGGGTG+CGG | 0.569313 | 2.2:-5007543 | MS.gene052091:CDS |
| GAATCAAATTCAGCCAGTGA+TGG | 0.572156 | 2.2:-5008728 | MS.gene052091:CDS |
| AAACATTCCTGCAACATGCA+GGG | 0.581348 | 2.2:+5009063 | None:intergenic |
| AACTTCCATTGACAACTCCA+TGG | 0.582257 | 2.2:+5007711 | None:intergenic |
| TATCAAACAACGATGAGAAG+TGG | 0.582630 | 2.2:+5007645 | None:intergenic |
| TGAGACCTACAAGCAATGGC+AGG | 0.588661 | 2.2:-5007504 | MS.gene052091:CDS |
| GGCCTGAGACCTACAAGCAA+TGG | 0.588665 | 2.2:-5007508 | MS.gene052091:CDS |
| TGATACTAGTAATGAACAAG+AGG | 0.594503 | 2.2:-5008641 | MS.gene052091:CDS |
| ATATTCGTCATTCTCTGCAA+AGG | 0.596904 | 2.2:+5008169 | None:intergenic |
| TATAAATGTTATAGCTTGTG+AGG | 0.597621 | 2.2:-5007549 | MS.gene052091:CDS |
| CAAAGGCTGATGCTTGAGAG+AGG | 0.599769 | 2.2:-5007590 | MS.gene052091:CDS |
| TCTTGCAGAAAGGTGTTAGG+AGG | 0.601548 | 2.2:+5009270 | None:intergenic |
| AGTCGATGTCGATGGTAAGT+GGG | 0.601905 | 2.2:-5007381 | MS.gene052091:CDS |
| GATGATACCACTGATCCAGA+TGG | 0.602284 | 2.2:-5008973 | MS.gene052091:CDS |
| AAGAGTCAAATTCGCCAACA+AGG | 0.602536 | 2.2:+5008869 | None:intergenic |
| AGTGAATGAAACCAAAGCAA+TGG | 0.607650 | 2.2:-5007432 | MS.gene052091:CDS |
| TCAGATGAAGATCCCTACAC+AGG | 0.608008 | 2.2:-5009162 | MS.gene052091:CDS |
| AGGGTGCGGAGAGGGTCGAA+AGG | 0.608738 | 2.2:-5007529 | MS.gene052091:CDS |
| CTATCTTTAGATCCTCGAGC+CGG | 0.610122 | 2.2:+5007864 | None:intergenic |
| GAGGTACTTCTTTGTCAGCA+AGG | 0.610885 | 2.2:-5008556 | MS.gene052091:CDS |
| TATGCTAACTCAATGTGCAC+AGG | 0.610937 | 2.2:-5008407 | MS.gene052091:CDS |
| TAGGTTCAAGCAAATCAGGT+TGG | 0.612445 | 2.2:-5007465 | MS.gene052091:CDS |
| CATTCTCTGCAAAGGAGATG+AGG | 0.613851 | 2.2:+5008177 | None:intergenic |
| ACCTCATCTAAGATCTCTGG+TGG | 0.614764 | 2.2:+5008574 | None:intergenic |
| GCAGGCCTAAATCCTGGCTG+AGG | 0.614834 | 2.2:+5007986 | None:intergenic |
| CCAGCAGTTACTACATCAAG+CGG | 0.615147 | 2.2:+5008232 | None:intergenic |
| TAGGCCTGCAGAAAGGGCAG+AGG | 0.619921 | 2.2:-5007972 | MS.gene052091:CDS |
| AAAATTTCCATCTGGATCAG+TGG | 0.623541 | 2.2:+5008966 | None:intergenic |
| AAAGGCTGATGCTTGAGAGA+GGG | 0.635382 | 2.2:-5007589 | MS.gene052091:CDS |
| ATGGGAAACTATCCGGCTCG+AGG | 0.640423 | 2.2:-5007876 | MS.gene052091:CDS |
| TCACATAATGTTGATTCAGG+AGG | 0.642164 | 2.2:-5008505 | MS.gene052091:CDS |
| CAGATGAAGATCCCTACACA+GGG | 0.642715 | 2.2:-5009161 | MS.gene052091:CDS |
| TAGCTTGTGAGGGTGCGGAG+AGG | 0.646388 | 2.2:-5007538 | MS.gene052091:CDS |
| ACATCAAGCGGCATATACGA+TGG | 0.651925 | 2.2:+5008244 | None:intergenic |
| TGATTCAGGAGGAAAGGCAA+AGG | 0.662454 | 2.2:-5008494 | MS.gene052091:CDS |
| GATACTAGTAATGAACAAGA+GGG | 0.667890 | 2.2:-5008640 | MS.gene052091:CDS |
| ATAAATGTTATAGCTTGTGA+GGG | 0.673348 | 2.2:-5007548 | MS.gene052091:CDS |
| AAACTTTCAATGAGACCTGG+TGG | 0.675722 | 2.2:-5008043 | MS.gene052091:CDS |
| AGACTCACATGAATTATCAG+TGG | 0.680494 | 2.2:+5008903 | None:intergenic |
| AAAGGGCAGAGGAAACTGGA+AGG | 0.686895 | 2.2:-5007961 | MS.gene052091:CDS |
| AGTCATCTTCTTCATCCATG+AGG | 0.688746 | 2.2:+5009097 | None:intergenic |
| ACCACCAGAGATCTTAGATG+AGG | 0.690503 | 2.2:-5008575 | MS.gene052091:CDS |
| GGATGTCGCTTATGTATCTG+AGG | 0.698731 | 2.2:+5009118 | None:intergenic |
| AGTCCACAAATCCACAACTG+TGG | 0.729336 | 2.2:+5008429 | None:intergenic |
| TGCTCTCAAAACTAGCAGTG+CGG | 0.748557 | 2.2:+5008941 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTGTTCATATTATTGATTT+TGG | - | chr2.2:5008495-5008514 | MS.gene052091:CDS | 20.0% |
| ! | GTATCATCATATGATGAATT+AGG | + | chr2.2:5007613-5007632 | None:intergenic | 25.0% |
| !! | ATAAATGTTATAGCTTGTGA+GGG | - | chr2.2:5009050-5009069 | MS.gene052091:CDS | 25.0% |
| !! | TATAAATGTTATAGCTTGTG+AGG | - | chr2.2:5009049-5009068 | MS.gene052091:CDS | 25.0% |
| !!! | ATTGATTTTGGAATTTGCTA+TGG | - | chr2.2:5008507-5008526 | MS.gene052091:CDS | 25.0% |
| !!! | TCATTGAAAGTTTTTTGATG+AGG | + | chr2.2:5008548-5008567 | None:intergenic | 25.0% |
| AAAAAACTTTCAATGAGACC+TGG | - | chr2.2:5008552-5008571 | MS.gene052091:CDS | 30.0% | |
| AACACTAAAATCTTGCAGAA+AGG | + | chr2.2:5007341-5007360 | None:intergenic | 30.0% | |
| AATCCAAAAATCTTCTTCCA+TGG | - | chr2.2:5008870-5008889 | MS.gene052091:CDS | 30.0% | |
| ATCGTTGTTTGATATGTTTG+AGG | - | chr2.2:5008962-5008981 | MS.gene052091:CDS | 30.0% | |
| CACTAAGCTGTAAATTGTAT+TGG | + | chr2.2:5008463-5008482 | None:intergenic | 30.0% | |
| CATTGAACCATGTAACAAAT+GGG | - | chr2.2:5007368-5007387 | MS.gene052091:CDS | 30.0% | |
| GATACTAGTAATGAACAAGA+GGG | - | chr2.2:5007958-5007977 | MS.gene052091:CDS | 30.0% | |
| TAATTCATGTGAGTCTGATT+CGG | - | chr2.2:5007702-5007721 | MS.gene052091:CDS | 30.0% | |
| TATGTATCTGAGGATGTTAT+TGG | + | chr2.2:5007473-5007492 | None:intergenic | 30.0% | |
| TCATTGAACCATGTAACAAA+TGG | - | chr2.2:5007367-5007386 | MS.gene052091:CDS | 30.0% | |
| TGATACTAGTAATGAACAAG+AGG | - | chr2.2:5007957-5007976 | MS.gene052091:CDS | 30.0% | |
| TTAGCTCATTACTTTGCTAA+TGG | - | chr2.2:5008303-5008322 | MS.gene052091:CDS | 30.0% | |
| TTAGTAGAGCAAAACTACTA+TGG | - | chr2.2:5007775-5007794 | MS.gene052091:CDS | 30.0% | |
| TTTGTATGCTTTATCTGCTT+GGG | - | chr2.2:5009265-5009284 | MS.gene052091:CDS | 30.0% | |
| ! | CATCGACTACAAAATCTTTA+TGG | + | chr2.2:5009205-5009224 | None:intergenic | 30.0% |
| ! | TTTTCTCTTGGTACTAATGA+AGG | + | chr2.2:5007910-5007929 | None:intergenic | 30.0% |
| ! | TTTTGTATGCTTTATCTGCT+TGG | - | chr2.2:5009264-5009283 | MS.gene052091:CDS | 30.0% |
| !! | TAGTAGTTTTGCTCTACTAA+AGG | + | chr2.2:5007775-5007794 | None:intergenic | 30.0% |
| AAAATTTCCATCTGGATCAG+TGG | + | chr2.2:5007635-5007654 | None:intergenic | 35.0% | |
| AGAAAAGAGAAGTCATGTGA+TGG | - | chr2.2:5007924-5007943 | MS.gene052091:CDS | 35.0% | |
| AGACTCACATGAATTATCAG+TGG | + | chr2.2:5007698-5007717 | None:intergenic | 35.0% | |
| AGTGAATGAAACCAAAGCAA+TGG | - | chr2.2:5009166-5009185 | MS.gene052091:CDS | 35.0% | |
| ATATTCGTCATTCTCTGCAA+AGG | + | chr2.2:5008432-5008451 | None:intergenic | 35.0% | |
| CAACATTATGTGATGCTTGT+TGG | + | chr2.2:5008086-5008105 | None:intergenic | 35.0% | |
| GAATATCTATTCCCTGTGTA+GGG | + | chr2.2:5007451-5007470 | None:intergenic | 35.0% | |
| GCAATGCAGTTGTATTCAAA+TGG | + | chr2.2:5008696-5008715 | None:intergenic | 35.0% | |
| GTTACATGGTTCAATGAGTT+AGG | + | chr2.2:5007364-5007383 | None:intergenic | 35.0% | |
| TATCAAACAACGATGAGAAG+TGG | + | chr2.2:5008956-5008975 | None:intergenic | 35.0% | |
| TTGGATTAATCTTCCTGATC+AGG | + | chr2.2:5008857-5008876 | None:intergenic | 35.0% | |
| ! | ACATGACTTCTCTTTTCTCT+TGG | + | chr2.2:5007922-5007941 | None:intergenic | 35.0% |
| ! | ACCATTTTCAGAATGGTACT+TGG | - | chr2.2:5007842-5007861 | MS.gene052091:CDS | 35.0% |
| ! | ACTCAAACCCATTTGTTACA+TGG | + | chr2.2:5007378-5007397 | None:intergenic | 35.0% |
| ! | ACTCCATGGAAGAAGATTTT+TGG | + | chr2.2:5008876-5008895 | None:intergenic | 35.0% |
| ! | ACTGATCCAGATGGAAATTT+TGG | - | chr2.2:5007634-5007653 | MS.gene052091:CDS | 35.0% |
| ! | TCCAAGTACCATTCTGAAAA+TGG | + | chr2.2:5007846-5007865 | None:intergenic | 35.0% |
| ! | TGTAACAAATGGGTTTGAGT+TGG | - | chr2.2:5007378-5007397 | MS.gene052091:CDS | 35.0% |
| !! | AAATCTTGCAGAAAGGTGTT+AGG | + | chr2.2:5007334-5007353 | None:intergenic | 35.0% |
| !! | AGAATGATTTTTCAGCAGCT+TGG | + | chr2.2:5007567-5007586 | None:intergenic | 35.0% |
| !! | GCATCACATAATGTTGATTC+AGG | - | chr2.2:5008090-5008109 | MS.gene052091:CDS | 35.0% |
| !! | TAATGTTGATTCAGGAGGAA+AGG | - | chr2.2:5008098-5008117 | MS.gene052091:CDS | 35.0% |
| !! | TCACATAATGTTGATTCAGG+AGG | - | chr2.2:5008093-5008112 | MS.gene052091:CDS | 35.0% |
| !!! | GAAAGTTTTTTGATGAGGCA+TGG | + | chr2.2:5008543-5008562 | None:intergenic | 35.0% |
| AAACATTCCTGCAACATGCA+GGG | + | chr2.2:5007538-5007557 | None:intergenic | 40.0% | |
| AAACTTTCAATGAGACCTGG+TGG | - | chr2.2:5008555-5008574 | MS.gene052091:CDS | 40.0% | |
| AACCAAAGCAATGGTGAAGA+AGG | - | chr2.2:5009175-5009194 | MS.gene052091:CDS | 40.0% | |
| AACTTCCATTGACAACTCCA+TGG | + | chr2.2:5008890-5008909 | None:intergenic | 40.0% | |
| AAGAGTCAAATTCGCCAACA+AGG | + | chr2.2:5007732-5007751 | None:intergenic | 40.0% | |
| ACAACTGCATTGCACAGAAA+TGG | - | chr2.2:5008703-5008722 | MS.gene052091:CDS | 40.0% | |
| AGGAGTTTGTAGTTCCAAGT+AGG | + | chr2.2:5007755-5007774 | None:intergenic | 40.0% | |
| AGGTTCAACAATGCTTCTCT+TGG | + | chr2.2:5008837-5008856 | None:intergenic | 40.0% | |
| AGTCATCTTCTTCATCCATG+AGG | + | chr2.2:5007504-5007523 | None:intergenic | 40.0% | |
| ATACATAAGCGACATCCTCA+TGG | - | chr2.2:5007486-5007505 | MS.gene052091:CDS | 40.0% | |
| ATGAGCTACTCAAGCAGATT+AGG | - | chr2.2:5008244-5008263 | MS.gene052091:CDS | 40.0% | |
| CAACTGCATTGCACAGAAAT+GGG | - | chr2.2:5008704-5008723 | MS.gene052091:CDS | 40.0% | |
| CACAGAAATGGGAAACTATC+CGG | - | chr2.2:5008715-5008734 | MS.gene052091:CDS | 40.0% | |
| CATGGATGAAGAAGATGACT+TGG | - | chr2.2:5007504-5007523 | MS.gene052091:CDS | 40.0% | |
| CGAATTTGACTCTTCCTACT+TGG | - | chr2.2:5007738-5007757 | MS.gene052091:CDS | 40.0% | |
| CTAAACCGAGTCAGGAAAAA+CGG | + | chr2.2:5008921-5008940 | None:intergenic | 40.0% | |
| GAATCAAATTCAGCCAGTGA+TGG | - | chr2.2:5007870-5007889 | MS.gene052091:CDS | 40.0% | |
| GGAATATCTATTCCCTGTGT+AGG | + | chr2.2:5007452-5007471 | None:intergenic | 40.0% | |
| TAAACATTCCTGCAACATGC+AGG | + | chr2.2:5007539-5007558 | None:intergenic | 40.0% | |
| TACAAACAATGCCACAGTTG+TGG | - | chr2.2:5008158-5008177 | MS.gene052091:CDS | 40.0% | |
| TACTTCTTTGTCAGCAAGGA+AGG | - | chr2.2:5008046-5008065 | MS.gene052091:CDS | 40.0% | |
| TAGGTTCAAGCAAATCAGGT+TGG | - | chr2.2:5009133-5009152 | MS.gene052091:CDS | 40.0% | |
| TATGCTAACTCAATGTGCAC+AGG | - | chr2.2:5008191-5008210 | MS.gene052091:CDS | 40.0% | |
| TCCTGCAAAGCTTCGAATTA+CGG | - | chr2.2:5008578-5008597 | MS.gene052091:CDS | 40.0% | |
| TCGAGGATCTAAAGATAGAC+AGG | - | chr2.2:5008739-5008758 | MS.gene052091:CDS | 40.0% | |
| TCTGAGCTTATGACAGAAGA+AGG | + | chr2.2:5007421-5007440 | None:intergenic | 40.0% | |
| TTCACTGCTACAGTTTCATC+AGG | + | chr2.2:5008810-5008829 | None:intergenic | 40.0% | |
| TTCAGAATGGTACTTGGAGT+TGG | - | chr2.2:5007848-5007867 | MS.gene052091:CDS | 40.0% | |
| TTCCTTCTTCACCATTGCTT+TGG | + | chr2.2:5009180-5009199 | None:intergenic | 40.0% | |
| TTCTTCCATGGAGTTGTCAA+TGG | - | chr2.2:5008882-5008901 | MS.gene052091:CDS | 40.0% | |
| ! | AAGCATTGTTGAACCTGATC+AGG | - | chr2.2:5008841-5008860 | MS.gene052091:CDS | 40.0% |
| ! | AGTACCTCATCTAAGATCTC+TGG | + | chr2.2:5008030-5008049 | None:intergenic | 40.0% |
| ! | GATTTTGTAGTCGATGTCGA+TGG | - | chr2.2:5009209-5009228 | MS.gene052091:CDS | 40.0% |
| ! | GCTGCTAACCATTTTCAGAA+TGG | - | chr2.2:5007835-5007854 | MS.gene052091:CDS | 40.0% |
| !! | GAATTTGCTATGGTTTCCAG+TGG | - | chr2.2:5008517-5008536 | MS.gene052091:CDS | 40.0% |
| !! | TCTGATTCGGTTAACCTTGT+TGG | - | chr2.2:5007715-5007734 | MS.gene052091:CDS | 40.0% |
| !!! | ACTGCTAGTTTTGAGAGCAA+TGG | - | chr2.2:5007661-5007680 | MS.gene052091:CDS | 40.0% |
| !!! | GTTTTTCCTGACTCGGTTTA+GGG | - | chr2.2:5008920-5008939 | MS.gene052091:CDS | 40.0% |
| AAAGGCTGATGCTTGAGAGA+GGG | - | chr2.2:5009009-5009028 | MS.gene052091:CDS | 45.0% | |
| ACATCAAGCGGCATATACGA+TGG | + | chr2.2:5008357-5008376 | None:intergenic | 45.0% | |
| ACCACCAGAGATCTTAGATG+AGG | - | chr2.2:5008023-5008042 | MS.gene052091:CDS | 45.0% | |
| AGGATTTAGGCCTGCAGAAA+GGG | - | chr2.2:5008620-5008639 | MS.gene052091:CDS | 45.0% | |
| AGTCCACAAATCCACAACTG+TGG | + | chr2.2:5008172-5008191 | None:intergenic | 45.0% | |
| AGTCGATGTCGATGGTAAGT+GGG | - | chr2.2:5009217-5009236 | MS.gene052091:CDS | 45.0% | |
| ATGCCACAGTTGTGGATTTG+TGG | - | chr2.2:5008166-5008185 | MS.gene052091:CDS | 45.0% | |
| ATGCTTGAGAGAGGGTTGTT+TGG | - | chr2.2:5009017-5009036 | MS.gene052091:CDS | 45.0% | |
| CAGATGAAGATCCCTACACA+GGG | - | chr2.2:5007437-5007456 | MS.gene052091:CDS | 45.0% | |
| CATTCTCTGCAAAGGAGATG+AGG | + | chr2.2:5008424-5008443 | None:intergenic | 45.0% | |
| CCAGCAGTTACTACATCAAG+CGG | + | chr2.2:5008369-5008388 | None:intergenic | 45.0% | |
| CCTGCAAAGCTTCGAATTAC+GGG | - | chr2.2:5008579-5008598 | MS.gene052091:CDS | 45.0% | |
| CGGCATATACGATGGAATCT+CGG | + | chr2.2:5008349-5008368 | None:intergenic | 45.0% | |
| CTATCTTTAGATCCTCGAGC+CGG | + | chr2.2:5008737-5008756 | None:intergenic | 45.0% | |
| GAAACCTCTTCAACCATCAC+TGG | + | chr2.2:5007886-5007905 | None:intergenic | 45.0% | |
| GAGCTAGGTTCAAGCAAATC+AGG | - | chr2.2:5009129-5009148 | MS.gene052091:CDS | 45.0% | |
| GATGATACCACTGATCCAGA+TGG | - | chr2.2:5007625-5007644 | MS.gene052091:CDS | 45.0% | |
| TAGTCGATGTCGATGGTAAG+TGG | - | chr2.2:5009216-5009235 | MS.gene052091:CDS | 45.0% | |
| TCAGATGAAGATCCCTACAC+AGG | - | chr2.2:5007436-5007455 | MS.gene052091:CDS | 45.0% | |
| TGAGAGAGGGTTGTTTGGAA+GGG | - | chr2.2:5009022-5009041 | MS.gene052091:CDS | 45.0% | |
| TGATTCAGGAGGAAAGGCAA+AGG | - | chr2.2:5008104-5008123 | MS.gene052091:CDS | 45.0% | |
| TGCTCTCAAAACTAGCAGTG+CGG | + | chr2.2:5007660-5007679 | None:intergenic | 45.0% | |
| TTGAGAGAGGGTTGTTTGGA+AGG | - | chr2.2:5009021-5009040 | MS.gene052091:CDS | 45.0% | |
| ! | ACCTCATCTAAGATCTCTGG+TGG | + | chr2.2:5008027-5008046 | None:intergenic | 45.0% |
| ! | GAGGTACTTCTTTGTCAGCA+AGG | - | chr2.2:5008042-5008061 | MS.gene052091:CDS | 45.0% |
| ! | GGATGTCGCTTATGTATCTG+AGG | + | chr2.2:5007483-5007502 | None:intergenic | 45.0% |
| ! | TGTTATAGCTTGTGAGGGTG+CGG | - | chr2.2:5009055-5009074 | MS.gene052091:CDS | 45.0% |
| !! | GATGGTAAGTGGGTTTTGCA+GGG | - | chr2.2:5009227-5009246 | MS.gene052091:CDS | 45.0% |
| !! | TCTTGCAGAAAGGTGTTAGG+AGG | + | chr2.2:5007331-5007350 | None:intergenic | 45.0% |
| !!! | CGTTTTTCCTGACTCGGTTT+AGG | - | chr2.2:5008919-5008938 | MS.gene052091:CDS | 45.0% |
| AAAGGGCAGAGGAAACTGGA+AGG | - | chr2.2:5008637-5008656 | MS.gene052091:CDS | 50.0% | |
| AGCTTCCTCAGCCAGGATTT+AGG | - | chr2.2:5008607-5008626 | MS.gene052091:CDS | 50.0% | |
| CAAAGGCTGATGCTTGAGAG+AGG | - | chr2.2:5009008-5009027 | MS.gene052091:CDS | 50.0% | |
| CAGGATTTAGGCCTGCAGAA+AGG | - | chr2.2:5008619-5008638 | MS.gene052091:CDS | 50.0% | |
| CCCGTAATTCGAAGCTTTGC+AGG | + | chr2.2:5008582-5008601 | None:intergenic | 50.0% | |
| CCGCTTGATGTAGTAACTGC+TGG | - | chr2.2:5008366-5008385 | MS.gene052091:CDS | 50.0% | |
| CTCTCAAGCATCAGCCTTTG+CGG | + | chr2.2:5009008-5009027 | None:intergenic | 50.0% | |
| CTGCTACAGTTTCATCAGGC+AGG | + | chr2.2:5008806-5008825 | None:intergenic | 50.0% | |
| CTTTCTGCAGGCCTAAATCC+TGG | + | chr2.2:5008621-5008640 | None:intergenic | 50.0% | |
| GTGCGGCCAAAATTTCCATC+TGG | + | chr2.2:5007643-5007662 | None:intergenic | 50.0% | |
| TCAGCCAGTGATGGTTGAAG+AGG | - | chr2.2:5007879-5007898 | MS.gene052091:CDS | 50.0% | |
| TCTCAAGCATCAGCCTTTGC+GGG | + | chr2.2:5009007-5009026 | None:intergenic | 50.0% | |
| TGAGACCTACAAGCAATGGC+AGG | - | chr2.2:5009094-5009113 | MS.gene052091:CDS | 50.0% | |
| TGCCATTGCTTGTAGGTCTC+AGG | + | chr2.2:5009095-5009114 | None:intergenic | 50.0% | |
| ! | AGGCAACACTCTTCGCCTTT+TGG | - | chr2.2:5008264-5008283 | MS.gene052091:CDS | 50.0% |
| ! | CCTTTGATCGTAGCTTGCCA+CGG | + | chr2.2:5008217-5008236 | None:intergenic | 50.0% |
| ! | GCAACACTCTTCGCCTTTTG+GGG | - | chr2.2:5008266-5008285 | MS.gene052091:CDS | 50.0% |
| ! | GCTTGTTGCTCAATGAGCAC+TGG | + | chr2.2:5007817-5007836 | None:intergenic | 50.0% |
| ! | GGCAACACTCTTCGCCTTTT+GGG | - | chr2.2:5008265-5008284 | MS.gene052091:CDS | 50.0% |
| ! | TGGGTTTTGCAGGGATGGAA+AGG | - | chr2.2:5009236-5009255 | MS.gene052091:CDS | 50.0% |
| ! | TTTTGATGAGGCATGGCCAC+TGG | + | chr2.2:5008536-5008555 | None:intergenic | 50.0% |
| !! | CGATGGTAAGTGGGTTTTGC+AGG | - | chr2.2:5009226-5009245 | MS.gene052091:CDS | 50.0% |
| !! | CTTTTGGGGATGGACTTCAG+CGG | - | chr2.2:5008280-5008299 | MS.gene052091:CDS | 50.0% |
| !! | GTAAGTGGGTTTTGCAGGGA+TGG | - | chr2.2:5009231-5009250 | MS.gene052091:CDS | 50.0% |
| !! | GTGCACCGTTTTTCCTGACT+CGG | - | chr2.2:5008913-5008932 | MS.gene052091:CDS | 50.0% |
| !! | TGCTCAATGAGCACTGGATC+AGG | + | chr2.2:5007811-5007830 | None:intergenic | 50.0% |
| AACTCAATGTGCACAGGCCG+TGG | - | chr2.2:5008197-5008216 | MS.gene052091:CDS | 55.0% | |
| AGCAATGGCAGGTCAGGAAC+AGG | - | chr2.2:5009105-5009124 | MS.gene052091:CDS | 55.0% | |
| AGGTCAGGAACAGGAGAGCT+AGG | - | chr2.2:5009114-5009133 | MS.gene052091:CDS | 55.0% | |
| CCGTGGCAAGCTACGATCAA+AGG | - | chr2.2:5008214-5008233 | MS.gene052091:CDS | 55.0% | |
| CCTACAAGCAATGGCAGGTC+AGG | - | chr2.2:5009099-5009118 | MS.gene052091:CDS | 55.0% | |
| CCTGACCTGCCATTGCTTGT+AGG | + | chr2.2:5009102-5009121 | None:intergenic | 55.0% | |
| CGCTGAAGTCCATCCCCAAA+AGG | + | chr2.2:5008282-5008301 | None:intergenic | 55.0% | |
| GCAGAAAGGGCAGAGGAAAC+TGG | - | chr2.2:5008633-5008652 | MS.gene052091:CDS | 55.0% | |
| GGAATTGAGCTTCCTCAGCC+AGG | - | chr2.2:5008600-5008619 | MS.gene052091:CDS | 55.0% | |
| GGCCTGAGACCTACAAGCAA+TGG | - | chr2.2:5009090-5009109 | MS.gene052091:CDS | 55.0% | |
| GTGCTTCCCTAAACCGAGTC+AGG | + | chr2.2:5008929-5008948 | None:intergenic | 55.0% | |
| GTTTCCTCTGCCCTTTCTGC+AGG | + | chr2.2:5008633-5008652 | None:intergenic | 55.0% | |
| ! | ATGGGAAACTATCCGGCTCG+AGG | - | chr2.2:5008722-5008741 | MS.gene052091:CDS | 55.0% |
| !! | CACTCTTCGCCTTTTGGGGA+TGG | - | chr2.2:5008270-5008289 | MS.gene052091:CDS | 55.0% |
| AGCCTTTGCGGGTCTTCGCA+AGG | + | chr2.2:5008996-5009015 | None:intergenic | 60.0% | |
| CGAAGCTTTGCAGGACCACC+AGG | + | chr2.2:5008573-5008592 | None:intergenic | 60.0% | |
| GCAGGCCTAAATCCTGGCTG+AGG | + | chr2.2:5008615-5008634 | None:intergenic | 60.0% | |
| GCGCAAACCCTGCATGTTGC+AGG | - | chr2.2:5007528-5007547 | MS.gene052091:CDS | 60.0% | |
| TAGGCCTGCAGAAAGGGCAG+AGG | - | chr2.2:5008626-5008645 | MS.gene052091:CDS | 60.0% | |
| TGCCTTGCGAAGACCCGCAA+AGG | - | chr2.2:5008991-5009010 | MS.gene052091:CDS | 60.0% | |
| ! | AGCTTGTGAGGGTGCGGAGA+GGG | - | chr2.2:5009061-5009080 | MS.gene052091:CDS | 60.0% |
| ! | TAGCTTGTGAGGGTGCGGAG+AGG | - | chr2.2:5009060-5009079 | MS.gene052091:CDS | 60.0% |
| AGGGTGCGGAGAGGGTCGAA+AGG | - | chr2.2:5009069-5009088 | MS.gene052091:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 5007322 | 5009298 | 5007322 | ID=MS.gene052091 |
| chr2.2 | mRNA | 5007322 | 5009298 | 5007322 | ID=MS.gene052091.t1;Parent=MS.gene052091 |
| chr2.2 | exon | 5007322 | 5009298 | 5007322 | ID=MS.gene052091.t1.exon1;Parent=MS.gene052091.t1 |
| chr2.2 | CDS | 5007322 | 5009298 | 5007322 | ID=cds.MS.gene052091.t1;Parent=MS.gene052091.t1 |
| Gene Sequence |
| Protein sequence |
