Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29579.t1 | GAU33996.1 | 90.7 | 453 | 19 | 3 | 55 | 502 | 4 | 438 | 2.80E-225 | 791.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29579.t1 | P92961 | 78.4 | 422 | 91 | 0 | 81 | 502 | 21 | 442 | 7.1e-193 | 674.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29579.t1 | A0A2Z6MNH1 | 90.7 | 453 | 19 | 3 | 55 | 502 | 4 | 438 | 2.0e-225 | 791.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene061191 | MS.gene29579 | 0.939736 | 7.69E-100 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene72660 | MS.gene29579 | PPI |
MS.gene80637 | MS.gene29579 | PPI |
MS.gene64892 | MS.gene29579 | PPI |
MS.gene29579 | MS.gene86543 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29579.t1 | MTR_5g081630 | 98.433 | 383 | 6 | 0 | 120 | 502 | 1 | 383 | 0.0 | 762 |
MS.gene29579.t1 | MTR_3g069960 | 77.283 | 427 | 97 | 0 | 76 | 502 | 10 | 436 | 0.0 | 662 |
MS.gene29579.t1 | MTR_3g069960 | 76.986 | 365 | 84 | 0 | 138 | 502 | 19 | 383 | 0.0 | 588 |
MS.gene29579.t1 | MTR_3g069960 | 79.344 | 305 | 63 | 0 | 77 | 381 | 11 | 315 | 6.32e-170 | 483 |
MS.gene29579.t1 | MTR_4g104510 | 42.824 | 425 | 241 | 2 | 79 | 502 | 27 | 450 | 1.17e-118 | 356 |
MS.gene29579.t1 | MTR_4g104510 | 43.294 | 425 | 237 | 4 | 79 | 502 | 27 | 448 | 1.75e-117 | 353 |
MS.gene29579.t1 | MTR_1g070470 | 31.519 | 441 | 287 | 8 | 74 | 502 | 3 | 440 | 1.36e-56 | 195 |
MS.gene29579.t1 | MTR_1g492640 | 32.553 | 427 | 267 | 9 | 91 | 501 | 59 | 480 | 7.92e-52 | 183 |
MS.gene29579.t1 | MTR_4g055610 | 30.044 | 456 | 292 | 11 | 66 | 502 | 15 | 462 | 2.21e-46 | 168 |
MS.gene29579.t1 | MTR_8g099320 | 28.341 | 434 | 271 | 11 | 92 | 499 | 28 | 447 | 9.23e-42 | 155 |
MS.gene29579.t1 | MTR_1g492640 | 31.728 | 353 | 222 | 7 | 161 | 501 | 3 | 348 | 4.95e-39 | 145 |
MS.gene29579.t1 | MTR_2g101920 | 28.508 | 449 | 299 | 15 | 61 | 496 | 18 | 457 | 9.46e-34 | 133 |
MS.gene29579.t1 | MTR_1g492640 | 32.765 | 293 | 183 | 6 | 91 | 371 | 59 | 349 | 3.23e-33 | 130 |
MS.gene29579.t1 | MTR_1g492640 | 32.765 | 293 | 183 | 6 | 91 | 371 | 41 | 331 | 4.20e-33 | 129 |
MS.gene29579.t1 | MTR_5g054730 | 27.354 | 446 | 300 | 13 | 64 | 499 | 7 | 438 | 2.67e-29 | 120 |
MS.gene29579.t1 | MTR_6g022790 | 25.495 | 455 | 310 | 13 | 62 | 500 | 14 | 455 | 4.96e-28 | 116 |
MS.gene29579.t1 | MTR_4g103890 | 26.847 | 406 | 273 | 11 | 105 | 496 | 24 | 419 | 8.39e-28 | 115 |
MS.gene29579.t1 | MTR_6g023065 | 26.593 | 455 | 297 | 15 | 61 | 500 | 31 | 463 | 2.20e-27 | 115 |
MS.gene29579.t1 | MTR_8g094290 | 27.097 | 465 | 289 | 16 | 76 | 499 | 16 | 471 | 5.67e-27 | 114 |
MS.gene29579.t1 | MTR_1g105980 | 27.097 | 465 | 286 | 17 | 80 | 499 | 11 | 467 | 7.74e-27 | 113 |
MS.gene29579.t1 | MTR_3g088475 | 25.941 | 478 | 310 | 15 | 61 | 499 | 4 | 476 | 1.24e-25 | 110 |
MS.gene29579.t1 | MTR_3g110660 | 25.367 | 477 | 298 | 17 | 69 | 499 | 14 | 478 | 4.27e-25 | 108 |
MS.gene29579.t1 | MTR_1g029750 | 26.230 | 427 | 276 | 10 | 67 | 456 | 12 | 436 | 1.31e-24 | 107 |
MS.gene29579.t1 | MTR_6g022780 | 26.790 | 433 | 300 | 11 | 78 | 500 | 3 | 428 | 1.61e-24 | 106 |
MS.gene29579.t1 | MTR_1g093020 | 25.688 | 436 | 308 | 11 | 74 | 499 | 7 | 436 | 2.38e-24 | 105 |
MS.gene29579.t1 | MTR_8g080120 | 26.500 | 400 | 261 | 13 | 120 | 500 | 51 | 436 | 3.18e-24 | 105 |
MS.gene29579.t1 | MTR_3g088455 | 26.195 | 481 | 298 | 17 | 62 | 502 | 15 | 478 | 4.14e-24 | 105 |
MS.gene29579.t1 | MTR_2g096830 | 27.356 | 435 | 298 | 12 | 76 | 500 | 2 | 428 | 7.58e-24 | 104 |
MS.gene29579.t1 | MTR_3g096800 | 26.923 | 416 | 263 | 14 | 123 | 501 | 64 | 475 | 1.01e-23 | 104 |
MS.gene29579.t1 | MTR_1g093030 | 25.934 | 455 | 302 | 17 | 60 | 499 | 2 | 436 | 4.06e-23 | 102 |
MS.gene29579.t1 | MTR_1g007380 | 24.051 | 474 | 309 | 15 | 70 | 499 | 2 | 468 | 6.08e-23 | 102 |
MS.gene29579.t1 | MTR_4g073520 | 25.410 | 488 | 292 | 18 | 67 | 499 | 38 | 508 | 6.94e-23 | 102 |
MS.gene29579.t1 | MTR_4g073520 | 25.410 | 488 | 292 | 18 | 67 | 499 | 38 | 508 | 9.92e-23 | 101 |
MS.gene29579.t1 | MTR_7g038910 | 26.116 | 448 | 308 | 15 | 64 | 500 | 8 | 443 | 1.27e-22 | 100 |
MS.gene29579.t1 | MTR_3g085820 | 28.610 | 374 | 227 | 15 | 76 | 421 | 6 | 367 | 2.15e-22 | 99.4 |
MS.gene29579.t1 | MTR_6g023075 | 26.097 | 433 | 303 | 11 | 78 | 500 | 3 | 428 | 3.21e-22 | 99.4 |
MS.gene29579.t1 | MTR_3g096830 | 25.408 | 429 | 275 | 14 | 65 | 456 | 1 | 421 | 7.68e-22 | 98.6 |
MS.gene29579.t1 | MTR_3g005740 | 24.691 | 486 | 315 | 17 | 45 | 500 | 5 | 469 | 8.28e-22 | 98.6 |
MS.gene29579.t1 | MTR_7g038910 | 28.205 | 312 | 207 | 12 | 120 | 420 | 58 | 363 | 1.50e-20 | 94.0 |
MS.gene29579.t1 | MTR_1g105995 | 25.536 | 466 | 292 | 16 | 80 | 499 | 10 | 466 | 3.41e-20 | 93.6 |
MS.gene29579.t1 | MTR_3g096840 | 25.653 | 421 | 260 | 16 | 123 | 500 | 70 | 480 | 6.56e-20 | 92.8 |
MS.gene29579.t1 | MTR_1g093020 | 25.123 | 406 | 288 | 11 | 74 | 469 | 7 | 406 | 8.93e-20 | 92.0 |
MS.gene29579.t1 | MTR_7g038910 | 28.431 | 306 | 202 | 12 | 120 | 414 | 58 | 357 | 1.07e-19 | 91.3 |
MS.gene29579.t1 | MTR_1g106000 | 25.290 | 431 | 265 | 16 | 123 | 501 | 46 | 471 | 3.83e-19 | 90.5 |
MS.gene29579.t1 | MTR_1g105990 | 25.268 | 467 | 287 | 16 | 80 | 495 | 10 | 465 | 6.29e-19 | 89.7 |
MS.gene29579.t1 | MTR_1g007240 | 22.302 | 417 | 286 | 8 | 120 | 500 | 40 | 454 | 1.79e-18 | 88.2 |
MS.gene29579.t1 | MTR_2g096830 | 26.934 | 349 | 237 | 12 | 76 | 414 | 2 | 342 | 2.25e-18 | 86.7 |
MS.gene29579.t1 | MTR_3g115090 | 25.386 | 453 | 300 | 15 | 60 | 486 | 55 | 495 | 6.56e-17 | 84.0 |
MS.gene29579.t1 | MTR_4g055637 | 30.435 | 207 | 124 | 5 | 306 | 502 | 182 | 378 | 1.78e-16 | 81.6 |
MS.gene29579.t1 | MTR_3g088465 | 25.789 | 380 | 248 | 13 | 62 | 419 | 15 | 382 | 8.23e-16 | 79.7 |
MS.gene29579.t1 | MTR_0531s0020 | 25.987 | 304 | 209 | 9 | 96 | 388 | 54 | 352 | 2.76e-15 | 77.8 |
MS.gene29579.t1 | MTR_1g007270 | 23.094 | 459 | 310 | 15 | 67 | 487 | 4 | 457 | 3.83e-15 | 78.2 |
MS.gene29579.t1 | MTR_3g461440 | 24.810 | 395 | 253 | 12 | 123 | 479 | 54 | 442 | 6.78e-15 | 77.4 |
MS.gene29579.t1 | MTR_3g461430 | 23.797 | 395 | 257 | 11 | 123 | 479 | 61 | 449 | 1.23e-14 | 76.6 |
MS.gene29579.t1 | MTR_1g492640 | 35.664 | 143 | 87 | 3 | 91 | 229 | 41 | 182 | 1.92e-14 | 73.9 |
MS.gene29579.t1 | MTR_1g492640 | 35.664 | 143 | 87 | 3 | 91 | 229 | 59 | 200 | 2.20e-14 | 73.9 |
MS.gene29579.t1 | MTR_1g007180 | 21.905 | 420 | 284 | 11 | 120 | 500 | 40 | 454 | 4.67e-14 | 74.7 |
MS.gene29579.t1 | MTR_2g031750 | 20.433 | 416 | 289 | 11 | 123 | 500 | 43 | 454 | 5.63e-14 | 74.3 |
MS.gene29579.t1 | MTR_3g061390 | 23.929 | 397 | 254 | 15 | 123 | 479 | 54 | 442 | 3.25e-13 | 72.0 |
MS.gene29579.t1 | MTR_5g023240 | 23.963 | 434 | 281 | 17 | 76 | 480 | 73 | 486 | 3.63e-13 | 72.0 |
MS.gene29579.t1 | MTR_3g461480 | 23.133 | 415 | 268 | 14 | 81 | 452 | 16 | 422 | 1.86e-11 | 66.6 |
MS.gene29579.t1 | MTR_4g033275 | 34.694 | 98 | 60 | 2 | 375 | 471 | 4 | 98 | 2.56e-11 | 60.8 |
MS.gene29579.t1 | MTR_3g110420 | 22.196 | 419 | 278 | 13 | 123 | 499 | 55 | 467 | 4.14e-11 | 65.5 |
MS.gene29579.t1 | MTR_5g023260 | 24.263 | 441 | 282 | 18 | 74 | 483 | 92 | 511 | 5.99e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene29579.t1 | AT2G39890 | 76.376 | 436 | 103 | 0 | 67 | 502 | 7 | 442 | 0.0 | 702 |
MS.gene29579.t1 | AT2G39890 | 76.376 | 436 | 103 | 0 | 67 | 502 | 7 | 442 | 0.0 | 702 |
MS.gene29579.t1 | AT3G55740 | 74.771 | 436 | 110 | 0 | 67 | 502 | 4 | 439 | 0.0 | 691 |
MS.gene29579.t1 | AT2G36590 | 77.962 | 422 | 93 | 0 | 81 | 502 | 15 | 436 | 0.0 | 672 |
MS.gene29579.t1 | AT2G39890 | 77.285 | 383 | 87 | 0 | 120 | 502 | 1 | 383 | 0.0 | 625 |
MS.gene29579.t1 | AT3G55740 | 76.240 | 383 | 91 | 0 | 120 | 502 | 1 | 383 | 0.0 | 616 |
MS.gene29579.t1 | AT3G55740 | 76.240 | 383 | 91 | 0 | 120 | 502 | 1 | 383 | 0.0 | 616 |
MS.gene29579.t1 | AT2G36590 | 78.361 | 305 | 66 | 0 | 81 | 385 | 15 | 319 | 4.83e-179 | 506 |
MS.gene29579.t1 | AT1G08230 | 28.027 | 446 | 264 | 10 | 92 | 502 | 28 | 451 | 7.47e-44 | 161 |
MS.gene29579.t1 | AT5G41800 | 28.375 | 437 | 271 | 12 | 92 | 501 | 27 | 448 | 9.71e-40 | 149 |
MS.gene29579.t1 | AT1G08230 | 28.274 | 336 | 199 | 6 | 193 | 502 | 13 | 332 | 2.78e-33 | 129 |
MS.gene29579.t1 | AT1G08230 | 28.274 | 336 | 199 | 6 | 193 | 502 | 13 | 332 | 2.78e-33 | 129 |
MS.gene29579.t1 | AT1G08230 | 28.274 | 336 | 199 | 6 | 193 | 502 | 13 | 332 | 2.78e-33 | 129 |
MS.gene29579.t1 | AT1G08230 | 28.274 | 336 | 199 | 6 | 193 | 502 | 32 | 351 | 3.66e-33 | 129 |
MS.gene29579.t1 | AT5G40780 | 26.106 | 452 | 304 | 13 | 66 | 500 | 8 | 446 | 4.75e-31 | 125 |
MS.gene29579.t1 | AT5G40780 | 26.768 | 396 | 265 | 10 | 120 | 500 | 13 | 398 | 5.14e-29 | 119 |
MS.gene29579.t1 | AT5G40780 | 26.768 | 396 | 265 | 10 | 120 | 500 | 13 | 398 | 5.14e-29 | 119 |
MS.gene29579.t1 | AT1G48640 | 25.280 | 447 | 307 | 11 | 75 | 500 | 13 | 453 | 2.87e-28 | 117 |
MS.gene29579.t1 | AT1G24400 | 27.586 | 435 | 293 | 14 | 78 | 500 | 17 | 441 | 1.51e-27 | 115 |
MS.gene29579.t1 | AT1G67640 | 26.852 | 432 | 300 | 12 | 78 | 500 | 17 | 441 | 4.92e-27 | 114 |
MS.gene29579.t1 | AT5G09220 | 26.160 | 474 | 294 | 16 | 76 | 499 | 22 | 489 | 4.30e-26 | 111 |
MS.gene29579.t1 | AT1G44100 | 26.392 | 485 | 296 | 18 | 65 | 499 | 3 | 476 | 5.72e-25 | 108 |
MS.gene29579.t1 | AT1G61270 | 26.207 | 435 | 298 | 10 | 62 | 486 | 13 | 434 | 1.69e-24 | 106 |
MS.gene29579.t1 | AT5G63850 | 25.000 | 420 | 266 | 12 | 123 | 499 | 49 | 462 | 3.90e-24 | 105 |
MS.gene29579.t1 | AT3G01760 | 25.513 | 439 | 302 | 11 | 60 | 486 | 8 | 433 | 1.83e-23 | 103 |
MS.gene29579.t1 | AT1G71680 | 25.934 | 455 | 304 | 14 | 66 | 500 | 7 | 448 | 5.42e-23 | 102 |
MS.gene29579.t1 | AT1G77380 | 26.730 | 419 | 259 | 14 | 123 | 499 | 60 | 472 | 1.01e-22 | 101 |
MS.gene29579.t1 | AT1G25530 | 27.342 | 395 | 264 | 11 | 120 | 500 | 55 | 440 | 9.82e-22 | 98.2 |
MS.gene29579.t1 | AT1G58360 | 24.280 | 486 | 319 | 16 | 55 | 499 | 3 | 480 | 2.88e-18 | 87.8 |
MS.gene29579.t1 | AT1G10010 | 24.762 | 420 | 273 | 11 | 123 | 502 | 58 | 474 | 7.49e-18 | 86.7 |
MS.gene29579.t1 | AT1G10010 | 24.762 | 420 | 273 | 11 | 123 | 502 | 59 | 475 | 7.66e-18 | 86.7 |
MS.gene29579.t1 | AT1G71680 | 26.100 | 341 | 227 | 12 | 66 | 389 | 7 | 339 | 2.13e-17 | 84.3 |
MS.gene29579.t1 | AT5G49630 | 22.642 | 477 | 315 | 16 | 69 | 499 | 10 | 478 | 5.84e-15 | 77.8 |
Find 111 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAGATTTCGTCGAAATTTA+TGG | 0.105108 | 5.2:+69734831 | MS.gene29579:CDS |
AGGCTGTTTATGTTCTATTT+AGG | 0.133427 | 5.2:+69738023 | MS.gene29579:intron |
ATCTTTCAGCTCTTGGAATT+TGG | 0.137122 | 5.2:+69738125 | MS.gene29579:CDS |
GATCTTGCTGGATATATTTA+TGG | 0.154303 | 5.2:+69736588 | MS.gene29579:CDS |
ATTGCTATGCTTCATGAATT+TGG | 0.182375 | 5.2:+69736540 | MS.gene29579:CDS |
AACACATCCTCCATGGATTT+TGG | 0.183469 | 5.2:-69734880 | None:intergenic |
AAATATTGGCTACATCATTT+TGG | 0.209110 | 5.2:+69737527 | MS.gene29579:CDS |
GCTTATGTTCTTGGATATTC+AGG | 0.210818 | 5.2:+69736432 | MS.gene29579:CDS |
ATTAATAGTGCTTATGTTCT+TGG | 0.219245 | 5.2:+69736423 | MS.gene29579:CDS |
TGGTTACCTTTGCAGGATAC+TGG | 0.229066 | 5.2:+69739454 | MS.gene29579:CDS |
GATACCAAACATGGGATTAA+AGG | 0.240091 | 5.2:+69740104 | MS.gene29579:CDS |
AGTAAAATATTTACGACAAT+TGG | 0.244065 | 5.2:+69739192 | MS.gene29579:CDS |
TTATATCTGGTTACCTTTGC+AGG | 0.244469 | 5.2:+69739447 | MS.gene29579:CDS |
GGCTGTTTATGTTCTATTTA+GGG | 0.253457 | 5.2:+69738024 | MS.gene29579:intron |
AAGTCCGATGTACGAGTATT+TGG | 0.263204 | 5.2:+69740082 | MS.gene29579:CDS |
GAACTTATCATTTAGAATCT+TGG | 0.267192 | 5.2:+69740145 | MS.gene29579:CDS |
AGCCTTATCGATGGTGGTTT+TGG | 0.268004 | 5.2:+69734857 | MS.gene29579:CDS |
TGCGAAAACATGATAAGTTT+TGG | 0.273586 | 5.2:-69740420 | None:intergenic |
AGGGACCATTATGGTTCCTT+TGG | 0.291528 | 5.2:+69736452 | MS.gene29579:CDS |
ATTCCTCATCTTTCAGCTCT+TGG | 0.291738 | 5.2:+69738118 | MS.gene29579:CDS |
TTTGCAGGATACTGGGCTTA+TGG | 0.315869 | 5.2:+69739462 | MS.gene29579:CDS |
TGGAGTTCTGCCATTATATC+TGG | 0.316550 | 5.2:+69739434 | MS.gene29579:CDS |
TGGATATTCAGGGACCATTA+TGG | 0.319732 | 5.2:+69736443 | MS.gene29579:CDS |
GACTTTGGCTCATACGGAAT+GGG | 0.335676 | 5.2:+69735082 | MS.gene29579:CDS |
TTCATCATGTTCTTTACAAC+TGG | 0.341148 | 5.2:-69739387 | None:intergenic |
GGCTCATACGGAATGGGGTT+TGG | 0.346579 | 5.2:+69735088 | MS.gene29579:CDS |
GTAAAATATTTACGACAATT+GGG | 0.357812 | 5.2:+69739193 | MS.gene29579:CDS |
CCATGGAGGATGTGTTGTTT+AGG | 0.358351 | 5.2:+69734887 | MS.gene29579:CDS |
GGGACCATTATGGTTCCTTT+GGG | 0.360448 | 5.2:+69736453 | MS.gene29579:CDS |
GGTTGGATAGGTGGTGTTGT+TGG | 0.363628 | 5.2:+69736474 | MS.gene29579:CDS |
CCATTATGGTTCCTTTGGGT+TGG | 0.367229 | 5.2:+69736457 | MS.gene29579:CDS |
TAACATCCATTCAAAAGCTT+TGG | 0.380271 | 5.2:+69740318 | MS.gene29579:CDS |
ATTAGATACCGTGATCTTGC+TGG | 0.380903 | 5.2:+69736576 | MS.gene29579:CDS |
ACTCCCTTTAATCCCATGTT+TGG | 0.383334 | 5.2:-69740108 | None:intergenic |
GCCACAACTTTCACCCAGAT+TGG | 0.385424 | 5.2:-69739525 | None:intergenic |
TTTGGCATTGGATCAACATT+TGG | 0.387263 | 5.2:+69740336 | MS.gene29579:CDS |
GCAAAGGTAACCAGATATAA+TGG | 0.392872 | 5.2:-69739444 | None:intergenic |
TTTGGCTGGTTCAGCTTTGA+AGG | 0.399376 | 5.2:+69737545 | MS.gene29579:CDS |
GCTCGAGATTATAGTGTTCC+AGG | 0.418700 | 5.2:+69739159 | MS.gene29579:CDS |
GTGGGGTTTGTGTTGACAAC+AGG | 0.421500 | 5.2:+69736399 | MS.gene29579:CDS |
ATGGTTCCTTTGGGTTGGAT+AGG | 0.421589 | 5.2:+69736462 | MS.gene29579:CDS |
CTGATTTGATGTGCAGTGTC+TGG | 0.427222 | 5.2:-69736255 | None:intergenic |
CCATTCAAAAGCTTTGGCAT+TGG | 0.427620 | 5.2:+69740324 | MS.gene29579:CDS |
GGCCAAAACCACCATCGATA+AGG | 0.431952 | 5.2:-69734859 | None:intergenic |
TTAGGCGTCACCCTTGTGAA+TGG | 0.440488 | 5.2:+69735060 | MS.gene29579:intron |
ATAATGTCAAGGGTCCAATC+TGG | 0.445142 | 5.2:+69739511 | MS.gene29579:CDS |
AGGAATGCTTCCTGAGATAC+AGG | 0.446567 | 5.2:+69739248 | MS.gene29579:CDS |
GGTTACCTTTGCAGGATACT+GGG | 0.449562 | 5.2:+69739455 | MS.gene29579:CDS |
TCATTTAGAATCTTGGTAAG+AGG | 0.460627 | 5.2:+69740152 | MS.gene29579:CDS |
TTGAACCATACCTGTATCTC+AGG | 0.461355 | 5.2:-69739258 | None:intergenic |
ATACCAAACATGGGATTAAA+GGG | 0.462442 | 5.2:+69740105 | MS.gene29579:CDS |
CTCGTGTTCGCATACAATAC+AGG | 0.468059 | 5.2:+69739228 | MS.gene29579:CDS |
GATTTGCAAGGATAAATGTA+AGG | 0.470613 | 5.2:-69740265 | None:intergenic |
CTTATGTTCTTGGATATTCA+GGG | 0.476371 | 5.2:+69736433 | MS.gene29579:CDS |
GTTCCTTTGGGTTGGATAGG+TGG | 0.476872 | 5.2:+69736465 | MS.gene29579:CDS |
ACATCGTTGTTATCAACATC+AGG | 0.480642 | 5.2:-69736225 | None:intergenic |
TGAATGGACTTTGGCTCATA+CGG | 0.482232 | 5.2:+69735076 | MS.gene29579:CDS |
GTTTGTTCTTATTTGTCACT+AGG | 0.484789 | 5.2:-69740295 | None:intergenic |
TCACCCTTGTGAATGGACTT+TGG | 0.490148 | 5.2:+69735067 | MS.gene29579:CDS |
TCAGCTCTACTGCCATTCCT+TGG | 0.498923 | 5.2:+69740203 | MS.gene29579:CDS |
TCAGCTCTTGGAATTTGGCT+CGG | 0.504062 | 5.2:+69738130 | MS.gene29579:CDS |
TAGATTCATGGTTTCAAGTG+GGG | 0.513864 | 5.2:+69736382 | MS.gene29579:intron |
GAACGTTTCTGTTGATGAAG+AGG | 0.516016 | 5.2:+69736185 | MS.gene29579:CDS |
GGAGATTTCATGAGCCTCAC+GGG | 0.518640 | 5.2:+69740224 | MS.gene29579:CDS |
TGAAAGATGAGGAATACAAA+TGG | 0.520939 | 5.2:-69738110 | None:intergenic |
TGGAGGATGTGTTGTTTAGG+AGG | 0.523337 | 5.2:+69734890 | MS.gene29579:CDS |
CCAACCCAAAGGAACCATAA+TGG | 0.524633 | 5.2:-69736457 | None:intergenic |
TGGAGATTTCATGAGCCTCA+CGG | 0.525781 | 5.2:+69740223 | MS.gene29579:CDS |
GGACTTTGGCTCATACGGAA+TGG | 0.530893 | 5.2:+69735081 | MS.gene29579:CDS |
ATTTGCAAGGATAAATGTAA+GGG | 0.535895 | 5.2:-69740264 | None:intergenic |
CTTGTACTGTCACTAAAAGA+TGG | 0.543411 | 5.2:+69738193 | MS.gene29579:CDS |
CCTAAACAACACATCCTCCA+TGG | 0.551440 | 5.2:-69734887 | None:intergenic |
TAAAATATTTACGACAATTG+GGG | 0.554830 | 5.2:+69739194 | MS.gene29579:CDS |
TAATGTCAAGGGTCCAATCT+GGG | 0.555099 | 5.2:+69739512 | MS.gene29579:CDS |
TGTAGATTCATGGTTTCAAG+TGG | 0.557082 | 5.2:+69736380 | MS.gene29579:intron |
GTAGATTCATGGTTTCAAGT+GGG | 0.559483 | 5.2:+69736381 | MS.gene29579:intron |
TGCACACACAAGTCCAGCTA+TGG | 0.562499 | 5.2:-69738080 | None:intergenic |
CTATGCTTCATGAATTTGGT+GGG | 0.571541 | 5.2:+69736544 | MS.gene29579:CDS |
CCGCAGCGCTGCAATAGTTG+CGG | 0.572180 | 5.2:-69740381 | None:intergenic |
AGTTGCGGCAACAGACATGA+TGG | 0.574833 | 5.2:-69740366 | None:intergenic |
TCCAATCTGGGTGAAAGTTG+TGG | 0.575627 | 5.2:+69739524 | MS.gene29579:CDS |
TGGAAAAGCCTTATCGATGG+TGG | 0.577305 | 5.2:+69734851 | MS.gene29579:CDS |
TGCAATGACTGATTGAAGAA+AGG | 0.580697 | 5.2:-69739559 | None:intergenic |
CTCATGAAATCTCCAAGGAA+TGG | 0.583815 | 5.2:-69740215 | None:intergenic |
GTATCCAAATACTCGTACAT+CGG | 0.587381 | 5.2:-69740086 | None:intergenic |
GAGTATTTGGATACCAAACA+TGG | 0.591198 | 5.2:+69740095 | MS.gene29579:CDS |
GCTATGCTTCATGAATTTGG+TGG | 0.593644 | 5.2:+69736543 | MS.gene29579:CDS |
CCAGCTATGGCAATAAAATG+TGG | 0.593703 | 5.2:-69738067 | None:intergenic |
TTTAGAATCTTGGTAAGAGG+TGG | 0.593972 | 5.2:+69740155 | MS.gene29579:CDS |
GAAAAGCATATTGCCTCACA+TGG | 0.595626 | 5.2:+69737475 | MS.gene29579:CDS |
TTATGGAAAAGCCTTATCGA+TGG | 0.612542 | 5.2:+69734848 | MS.gene29579:CDS |
ATTCCAAGAGCTGAAAGATG+AGG | 0.614707 | 5.2:-69738121 | None:intergenic |
GGAACACTATAATCTCGAGC+TGG | 0.614856 | 5.2:-69739156 | None:intergenic |
AAATATATCCAGCAAGATCA+CGG | 0.617306 | 5.2:-69736584 | None:intergenic |
ACTTTGGCTCATACGGAATG+GGG | 0.621465 | 5.2:+69735083 | MS.gene29579:CDS |
ACTGCACATCAAATCAGCAC+TGG | 0.622058 | 5.2:+69736261 | MS.gene29579:CDS |
CTAGGTACATATGATTTGCA+AGG | 0.626482 | 5.2:-69740277 | None:intergenic |
ATATAATGGCAGAACTCCAA+CGG | 0.633354 | 5.2:-69739430 | None:intergenic |
TGAGCCAAAGTCCATTCACA+AGG | 0.644668 | 5.2:-69735071 | None:intergenic |
ATAAGCCCAGTATCCTGCAA+AGG | 0.654594 | 5.2:-69739460 | None:intergenic |
CCGCAACTATTGCAGCGCTG+CGG | 0.655381 | 5.2:+69740381 | MS.gene29579:CDS |
TTTGCAAGGATAAATGTAAG+GGG | 0.658355 | 5.2:-69740263 | None:intergenic |
TGAGGCTCATGAAATCTCCA+AGG | 0.658818 | 5.2:-69740220 | None:intergenic |
GGCTGTAGCAAAATTCACGC+TGG | 0.660167 | 5.2:+69736155 | MS.gene29579:CDS |
ACACCACCTATCCAACCCAA+AGG | 0.675537 | 5.2:-69736468 | None:intergenic |
TGTAGCAAAATTCACGCTGG+CGG | 0.678564 | 5.2:+69736158 | MS.gene29579:CDS |
GTGCTATGACAATATATGCG+AGG | 0.685612 | 5.2:-69738171 | None:intergenic |
AGTATTTGGATACCAAACAT+GGG | 0.691576 | 5.2:+69740096 | MS.gene29579:CDS |
CATACTGCAGAGTCCATGTG+AGG | 0.716059 | 5.2:-69737488 | None:intergenic |
GAGCCAAAGTCCATTCACAA+GGG | 0.744127 | 5.2:-69735070 | None:intergenic |
ATGTGCTTATAGCTCCCGTG+AGG | 0.755171 | 5.2:-69740238 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AACAATAATTTTTTTTTTTG+AGG | + | chr5.2:69735623-69735642 | MS.gene29579:intron | 10.0% |
!!! | ACAATAATTTTTTTTTTTGA+GGG | + | chr5.2:69735624-69735643 | MS.gene29579:intron | 10.0% |
!!! | ATTCAAGTTATAAAATATTT+AGG | - | chr5.2:69740014-69740033 | None:intergenic | 10.0% |
!! | GCTTCTAAATAAAATTATTT+GGG | - | chr5.2:69735354-69735373 | None:intergenic | 15.0% |
!!! | AATCTTTTCATGATAAATAT+TGG | + | chr5.2:69737513-69737532 | MS.gene29579:CDS | 15.0% |
!!! | TATTAAATAAATCAGCTTTT+TGG | + | chr5.2:69736996-69737015 | MS.gene29579:intron | 15.0% |
!!! | TTTAAAATTTAGTTTAGATG+TGG | + | chr5.2:69739619-69739638 | MS.gene29579:intron | 15.0% |
!! | AAAGAAACAATTAATTACAG+AGG | - | chr5.2:69738337-69738356 | None:intergenic | 20.0% |
!! | AATTTGCAAAATGACAATTT+AGG | + | chr5.2:69737057-69737076 | MS.gene29579:intron | 20.0% |
!! | AGAAGAGAATAATGTAATTA+TGG | - | chr5.2:69737596-69737615 | None:intergenic | 20.0% |
!! | AGTAAAATATTTACGACAAT+TGG | + | chr5.2:69739192-69739211 | MS.gene29579:CDS | 20.0% |
!! | ATAAAGAAATCTTGATATCA+TGG | - | chr5.2:69736979-69736998 | None:intergenic | 20.0% |
!! | CAAACTACTTATAAAAGATT+TGG | + | chr5.2:69736037-69736056 | MS.gene29579:intron | 20.0% |
!! | CGCTTCTAAATAAAATTATT+TGG | - | chr5.2:69735355-69735374 | None:intergenic | 20.0% |
!! | GATAGTAAAAAATAAACTGT+TGG | - | chr5.2:69739123-69739142 | None:intergenic | 20.0% |
!! | GTAAAATATTTACGACAATT+GGG | + | chr5.2:69739193-69739212 | MS.gene29579:CDS | 20.0% |
!! | TAAAATATTTACGACAATTG+GGG | + | chr5.2:69739194-69739213 | MS.gene29579:CDS | 20.0% |
!! | TAACACACATATTTAATACT+TGG | + | chr5.2:69738294-69738313 | MS.gene29579:intron | 20.0% |
!! | TCTTGAAGAAAAAAAAAAGA+GGG | + | chr5.2:69736134-69736153 | MS.gene29579:intron | 20.0% |
!! | TTCTTGAAGAAAAAAAAAAG+AGG | + | chr5.2:69736133-69736152 | MS.gene29579:intron | 20.0% |
!! | TTTGGTCATTGAAATTATAA+GGG | + | chr5.2:69737014-69737033 | MS.gene29579:intron | 20.0% |
!!! | AAAGTGAGTTTTACTTTATT+TGG | + | chr5.2:69739335-69739354 | MS.gene29579:intron | 20.0% |
!!! | AACAAGGTAAAGATAAATTT+TGG | - | chr5.2:69738917-69738936 | None:intergenic | 20.0% |
!!! | ACAGTTTATTTTTTACTATC+AGG | + | chr5.2:69739123-69739142 | MS.gene29579:intron | 20.0% |
!!! | AGTAAAACTCACTTTAAAAA+TGG | - | chr5.2:69739330-69739349 | None:intergenic | 20.0% |
!!! | ATATCAGATGTTTTGAAAAT+TGG | - | chr5.2:69739709-69739728 | None:intergenic | 20.0% |
!!! | CAAAATTATGGTGTTAAATT+TGG | - | chr5.2:69737123-69737142 | None:intergenic | 20.0% |
!!! | GAAAATGAAAATTTTGTTCA+TGG | - | chr5.2:69736087-69736106 | None:intergenic | 20.0% |
!!! | GGTTTGTCATTTTAAAAATT+AGG | + | chr5.2:69739925-69739944 | MS.gene29579:intron | 20.0% |
!!! | TATCAGATGTTTTGAAAATT+GGG | - | chr5.2:69739708-69739727 | None:intergenic | 20.0% |
!!! | TTTTGGTCATTGAAATTATA+AGG | + | chr5.2:69737013-69737032 | MS.gene29579:intron | 20.0% |
! | AAAATCGTGAATTTAGATAC+AGG | + | chr5.2:69739953-69739972 | MS.gene29579:intron | 25.0% |
! | AAAATGTATAAGTGGAGAAA+AGG | + | chr5.2:69739904-69739923 | MS.gene29579:intron | 25.0% |
! | AAATCGTGAATTTAGATACA+GGG | + | chr5.2:69739954-69739973 | MS.gene29579:intron | 25.0% |
! | AATAAGCTGAAAACAACTTA+TGG | + | chr5.2:69736794-69736813 | MS.gene29579:intron | 25.0% |
! | AATTTGTGCATTCATTAAGA+TGG | + | chr5.2:69737783-69737802 | MS.gene29579:intron | 25.0% |
! | ACATCGAATCTTCAAAATTA+TGG | - | chr5.2:69737135-69737154 | None:intergenic | 25.0% |
! | AGTAATCAAGAGATATTACA+GGG | + | chr5.2:69735025-69735044 | MS.gene29579:intron | 25.0% |
! | ATCTCTTGATTACTATGTAA+TGG | - | chr5.2:69735019-69735038 | None:intergenic | 25.0% |
! | ATTAATAGTGCTTATGTTCT+TGG | + | chr5.2:69736423-69736442 | MS.gene29579:CDS | 25.0% |
! | ATTGAATAGTATCAAGAATC+TGG | + | chr5.2:69737354-69737373 | MS.gene29579:intron | 25.0% |
! | ATTTGCAAGGATAAATGTAA+GGG | - | chr5.2:69740267-69740286 | None:intergenic | 25.0% |
! | CCAAAATCTCAAACTATTAA+TGG | + | chr5.2:69735769-69735788 | MS.gene29579:intron | 25.0% |
! | GATATAACTGATGTTATGTT+TGG | + | chr5.2:69736641-69736660 | MS.gene29579:intron | 25.0% |
! | GATTATTGAAAGCAATATGT+AGG | + | chr5.2:69737177-69737196 | MS.gene29579:intron | 25.0% |
! | TAACAACAAGTTCTTGAATT+AGG | - | chr5.2:69736918-69736937 | None:intergenic | 25.0% |
! | TAGTAATCAAGAGATATTAC+AGG | + | chr5.2:69735024-69735043 | MS.gene29579:intron | 25.0% |
! | TCATTTAAGCAATCAACTTA+GGG | - | chr5.2:69735134-69735153 | None:intergenic | 25.0% |
! | TGAAATTTAAGAAGAACCTT+TGG | - | chr5.2:69735432-69735451 | None:intergenic | 25.0% |
! | TTATTTGGTTGTAACCTAAT+AGG | + | chr5.2:69739350-69739369 | MS.gene29579:intron | 25.0% |
!! | CTTTTTATGTGTGTTCATAT+CGG | - | chr5.2:69735652-69735671 | None:intergenic | 25.0% |
!! | GAACTTATCATTTAGAATCT+TGG | + | chr5.2:69740145-69740164 | MS.gene29579:CDS | 25.0% |
!! | TATGGTGTTAAATTTGGAAA+AGG | - | chr5.2:69737117-69737136 | None:intergenic | 25.0% |
!! | TTTTCTACCTACAATGAAAA+TGG | - | chr5.2:69737460-69737479 | None:intergenic | 25.0% |
!! | TTTTTGCTGAATAATGTCAA+GGG | + | chr5.2:69739501-69739520 | MS.gene29579:CDS | 25.0% |
!!! | AAAATAAGCTTTTTTGTCCT+TGG | - | chr5.2:69737282-69737301 | None:intergenic | 25.0% |
!!! | AAATATTGGCTACATCATTT+TGG | + | chr5.2:69737527-69737546 | MS.gene29579:CDS | 25.0% |
!!! | ACAATGTAGTTGTTTGTTAT+TGG | - | chr5.2:69735965-69735984 | None:intergenic | 25.0% |
!!! | ATCAGATGTTTTGAAAATTG+GGG | - | chr5.2:69739707-69739726 | None:intergenic | 25.0% |
!!! | CAATGTAGTTGTTTGTTATT+GGG | - | chr5.2:69735964-69735983 | None:intergenic | 25.0% |
!!! | CCATTAATAGTTTGAGATTT+TGG | - | chr5.2:69735772-69735791 | None:intergenic | 25.0% |
!!! | GGTAAAGATAAATTTTGGAA+AGG | - | chr5.2:69738912-69738931 | None:intergenic | 25.0% |
!!! | TTTTAAAAGCAGCAAAGTAT+TGG | - | chr5.2:69739606-69739625 | None:intergenic | 25.0% |
!!! | TTTTTGTTGTTGTAGATTCA+TGG | + | chr5.2:69736370-69736389 | MS.gene29579:intron | 25.0% |
!!! | TTTTTTGAGTAATTTGCATC+TGG | + | chr5.2:69738714-69738733 | MS.gene29579:intron | 25.0% |
!!! | TTTTTTGCTGAATAATGTCA+AGG | + | chr5.2:69739500-69739519 | MS.gene29579:CDS | 25.0% |
AAATATATCCAGCAAGATCA+CGG | - | chr5.2:69736587-69736606 | None:intergenic | 30.0% | |
AAGAGTGACATTATATTCCT+TGG | - | chr5.2:69738537-69738556 | None:intergenic | 30.0% | |
AATCGTGAATTTAGATACAG+GGG | + | chr5.2:69739955-69739974 | MS.gene29579:intron | 30.0% | |
ACATCAGTTATATCTAGTCA+AGG | - | chr5.2:69736635-69736654 | None:intergenic | 30.0% | |
ACTCATAAGTCATAACTATC+TGG | + | chr5.2:69735862-69735881 | MS.gene29579:intron | 30.0% | |
ACTTCAGATAACTAGTGTTA+TGG | + | chr5.2:69738398-69738417 | MS.gene29579:intron | 30.0% | |
AGGCTGTTTATGTTCTATTT+AGG | + | chr5.2:69738023-69738042 | MS.gene29579:intron | 30.0% | |
AGTATTTGGATACCAAACAT+GGG | + | chr5.2:69740096-69740115 | MS.gene29579:CDS | 30.0% | |
AGTCAATATCTGATTGAGAT+TGG | + | chr5.2:69734942-69734961 | MS.gene29579:intron | 30.0% | |
ATACCAAACATGGGATTAAA+GGG | + | chr5.2:69740105-69740124 | MS.gene29579:CDS | 30.0% | |
ATCAACCTCAAAAGTTTAGA+TGG | - | chr5.2:69739737-69739756 | None:intergenic | 30.0% | |
ATCAGTTATATCTAGTCAAG+GGG | - | chr5.2:69736633-69736652 | None:intergenic | 30.0% | |
ATGTGATGTATCAACTTGTA+AGG | + | chr5.2:69735183-69735202 | MS.gene29579:intron | 30.0% | |
ATTGCTATGCTTCATGAATT+TGG | + | chr5.2:69736540-69736559 | MS.gene29579:CDS | 30.0% | |
ATTTAAGCAATCAACTTAGG+GGG | - | chr5.2:69735132-69735151 | None:intergenic | 30.0% | |
CAAGGTTATATATTTCTTCC+TGG | + | chr5.2:69739278-69739297 | MS.gene29579:intron | 30.0% | |
CATCAGTTATATCTAGTCAA+GGG | - | chr5.2:69736634-69736653 | None:intergenic | 30.0% | |
CATTTAAGCAATCAACTTAG+GGG | - | chr5.2:69735133-69735152 | None:intergenic | 30.0% | |
CTCATTTAAGCAATCAACTT+AGG | - | chr5.2:69735135-69735154 | None:intergenic | 30.0% | |
CTTATGTTCTTGGATATTCA+GGG | + | chr5.2:69736433-69736452 | MS.gene29579:CDS | 30.0% | |
GATCTTGCTGGATATATTTA+TGG | + | chr5.2:69736588-69736607 | MS.gene29579:CDS | 30.0% | |
GATTTGCAAGGATAAATGTA+AGG | - | chr5.2:69740268-69740287 | None:intergenic | 30.0% | |
GCTTTATGATTCTCAATCAT+TGG | - | chr5.2:69739036-69739055 | None:intergenic | 30.0% | |
GGCTGTTTATGTTCTATTTA+GGG | + | chr5.2:69738024-69738043 | MS.gene29579:intron | 30.0% | |
GTCATTGAAATTATAAGGGT+CGG | + | chr5.2:69737018-69737037 | MS.gene29579:intron | 30.0% | |
TAACATCCATTCAAAAGCTT+TGG | + | chr5.2:69740318-69740337 | MS.gene29579:CDS | 30.0% | |
TCAACCTCAAAAGTTTAGAT+GGG | - | chr5.2:69739736-69739755 | None:intergenic | 30.0% | |
TCTTTCAAACAGTCTCATAA+GGG | + | chr5.2:69736843-69736862 | MS.gene29579:intron | 30.0% | |
TGAAAGATGAGGAATACAAA+TGG | - | chr5.2:69738113-69738132 | None:intergenic | 30.0% | |
TGAAGAACAGAAAAAGTTGT+GGG | + | chr5.2:69735927-69735946 | MS.gene29579:intron | 30.0% | |
TGAGATTTCGTCGAAATTTA+TGG | + | chr5.2:69734831-69734850 | MS.gene29579:CDS | 30.0% | |
TTCATATACATCGACATTGT+TGG | - | chr5.2:69735219-69735238 | None:intergenic | 30.0% | |
TTCATCATGTTCTTTACAAC+TGG | - | chr5.2:69739390-69739409 | None:intergenic | 30.0% | |
TTTAAGAGACTTACAATCCA+AGG | + | chr5.2:69737262-69737281 | MS.gene29579:intron | 30.0% | |
TTTGCAAGGATAAATGTAAG+GGG | - | chr5.2:69740266-69740285 | None:intergenic | 30.0% | |
! | ATATCGTGGATTTAAAACTG+AGG | - | chr5.2:69739679-69739698 | None:intergenic | 30.0% |
! | ATGTCACTCTTTTGTGATTT+TGG | + | chr5.2:69738546-69738565 | MS.gene29579:intron | 30.0% |
! | CTATATTTTCAGTTTACCGT+TGG | + | chr5.2:69739414-69739433 | MS.gene29579:CDS | 30.0% |
! | GTTTGTTCCATTTTCATTGT+AGG | + | chr5.2:69737450-69737469 | MS.gene29579:intron | 30.0% |
! | GTTTGTTCTTATTTGTCACT+AGG | - | chr5.2:69740298-69740317 | None:intergenic | 30.0% |
! | TATCGTGGATTTAAAACTGA+GGG | - | chr5.2:69739678-69739697 | None:intergenic | 30.0% |
! | TCATTTAGAATCTTGGTAAG+AGG | + | chr5.2:69740152-69740171 | MS.gene29579:CDS | 30.0% |
! | TGCGAAAACATGATAAGTTT+TGG | - | chr5.2:69740423-69740442 | None:intergenic | 30.0% |
! | TTATCTTTACCTTGTTGTGA+AGG | + | chr5.2:69738921-69738940 | MS.gene29579:intron | 30.0% |
! | TTCTCCACTTATACATTTTG+AGG | - | chr5.2:69739903-69739922 | None:intergenic | 30.0% |
!! | ATTTTACTTGTTGATGTTCC+TGG | - | chr5.2:69739180-69739199 | None:intergenic | 30.0% |
!! | CTGAATTTTGATGATTTGAC+AGG | - | chr5.2:69739880-69739899 | None:intergenic | 30.0% |
!! | GTTTGTTATTGGGTTATCAT+GGG | - | chr5.2:69735954-69735973 | None:intergenic | 30.0% |
!! | TGTTTGTTATTGGGTTATCA+TGG | - | chr5.2:69735955-69735974 | None:intergenic | 30.0% |
!!! | AAATGAGTTTTTTAGCGAGA+TGG | + | chr5.2:69739815-69739834 | MS.gene29579:intron | 30.0% |
!!! | AATGAGTTTTTTAGCGAGAT+GGG | + | chr5.2:69739816-69739835 | MS.gene29579:intron | 30.0% |
!!! | CAGTTTTAAATCCACGATAT+TGG | + | chr5.2:69739679-69739698 | MS.gene29579:intron | 30.0% |
!!! | TCAGATGTTTTGAAAATTGG+GGG | - | chr5.2:69739706-69739725 | None:intergenic | 30.0% |
!!! | TTCTTCTTAGATGTCGATTT+TGG | - | chr5.2:69735719-69735738 | None:intergenic | 30.0% |
AAGAATCACCATACCTTGAT+TGG | + | chr5.2:69734982-69735001 | MS.gene29579:intron | 35.0% | |
AAGCAGTATATAGTTCGACT+CGG | + | chr5.2:69738954-69738973 | MS.gene29579:intron | 35.0% | |
AAGTCAATCTCAATCCAAAC+AGG | + | chr5.2:69736891-69736910 | MS.gene29579:intron | 35.0% | |
AAGTTGCATATCCTACATGA+TGG | - | chr5.2:69735284-69735303 | None:intergenic | 35.0% | |
ACATCGTTGTTATCAACATC+AGG | - | chr5.2:69736228-69736247 | None:intergenic | 35.0% | |
ACCAAAAATCGTGAGACAAA+AGG | - | chr5.2:69739654-69739673 | None:intergenic | 35.0% | |
AGAAATATACCAGAATACGC+AGG | - | chr5.2:69735484-69735503 | None:intergenic | 35.0% | |
ATATAATGGCAGAACTCCAA+CGG | - | chr5.2:69739433-69739452 | None:intergenic | 35.0% | |
ATCGTGAATTTAGATACAGG+GGG | + | chr5.2:69739956-69739975 | MS.gene29579:intron | 35.0% | |
ATCTTTCAGCTCTTGGAATT+TGG | + | chr5.2:69738125-69738144 | MS.gene29579:CDS | 35.0% | |
ATGTAGGATATGCAACTTTG+AGG | + | chr5.2:69735286-69735305 | MS.gene29579:intron | 35.0% | |
CAAAAATCGTGAGACAAAAG+GGG | - | chr5.2:69739652-69739671 | None:intergenic | 35.0% | |
CAACCTCAAAAGTTTAGATG+GGG | - | chr5.2:69739735-69739754 | None:intergenic | 35.0% | |
CAGGGATTATGTAACACAAA+TGG | - | chr5.2:69735465-69735484 | None:intergenic | 35.0% | |
CCAAAAATCGTGAGACAAAA+GGG | - | chr5.2:69739653-69739672 | None:intergenic | 35.0% | |
CGATAGCATATCACAAATCA+TGG | - | chr5.2:69737821-69737840 | None:intergenic | 35.0% | |
CTATGCTTCATGAATTTGGT+GGG | + | chr5.2:69736544-69736563 | MS.gene29579:CDS | 35.0% | |
CTCTTTCAAACAGTCTCATA+AGG | + | chr5.2:69736842-69736861 | MS.gene29579:intron | 35.0% | |
CTGAAGAACAGAAAAAGTTG+TGG | + | chr5.2:69735926-69735945 | MS.gene29579:intron | 35.0% | |
CTTGTACTGTCACTAAAAGA+TGG | + | chr5.2:69738193-69738212 | MS.gene29579:CDS | 35.0% | |
GAAATATACCAGAATACGCA+GGG | - | chr5.2:69735483-69735502 | None:intergenic | 35.0% | |
GAGTATTTGGATACCAAACA+TGG | + | chr5.2:69740095-69740114 | MS.gene29579:CDS | 35.0% | |
GATACCAAACATGGGATTAA+AGG | + | chr5.2:69740104-69740123 | MS.gene29579:CDS | 35.0% | |
GCAAAGGTAACCAGATATAA+TGG | - | chr5.2:69739447-69739466 | None:intergenic | 35.0% | |
GCTTATGTTCTTGGATATTC+AGG | + | chr5.2:69736432-69736451 | MS.gene29579:CDS | 35.0% | |
GTATCCAAATACTCGTACAT+CGG | - | chr5.2:69740089-69740108 | None:intergenic | 35.0% | |
GTCAAAGAAAATCTCACCAA+AGG | + | chr5.2:69735413-69735432 | MS.gene29579:intron | 35.0% | |
GTCGATGTATATGAATAGAG+TGG | + | chr5.2:69735224-69735243 | MS.gene29579:intron | 35.0% | |
TCAGCCTCAAAATGTATAAG+TGG | + | chr5.2:69739896-69739915 | MS.gene29579:intron | 35.0% | |
TCATCAACAACAGAAACAAG+TGG | + | chr5.2:69736012-69736031 | MS.gene29579:intron | 35.0% | |
TGAATCCAAACAAAAACTCC+AGG | - | chr5.2:69739299-69739318 | None:intergenic | 35.0% | |
TGAATGCACAAATTGACATC+AGG | - | chr5.2:69737777-69737796 | None:intergenic | 35.0% | |
TGCAATGACTGATTGAAGAA+AGG | - | chr5.2:69739562-69739581 | None:intergenic | 35.0% | |
TGTAGATTCATGGTTTCAAG+TGG | + | chr5.2:69736380-69736399 | MS.gene29579:intron | 35.0% | |
TGTAGGATATGCAACTTTGA+GGG | + | chr5.2:69735287-69735306 | MS.gene29579:intron | 35.0% | |
TTATATCTGGTTACCTTTGC+AGG | + | chr5.2:69739447-69739466 | MS.gene29579:CDS | 35.0% | |
TTCTTGAATTAGGACCTGTT+TGG | - | chr5.2:69736908-69736927 | None:intergenic | 35.0% | |
! | AAACCTTTTCCCATTAGATG+AGG | - | chr5.2:69737862-69737881 | None:intergenic | 35.0% |
! | ATCGTGGATTTAAAACTGAG+GGG | - | chr5.2:69739677-69739696 | None:intergenic | 35.0% |
! | CTAGGTACATATGATTTGCA+AGG | - | chr5.2:69740280-69740299 | None:intergenic | 35.0% |
! | GCAATTTTACTCTGCAAATG+TGG | - | chr5.2:69735811-69735830 | None:intergenic | 35.0% |
! | GTAGATTCATGGTTTCAAGT+GGG | + | chr5.2:69736381-69736400 | MS.gene29579:intron | 35.0% |
! | TAGATTCATGGTTTCAAGTG+GGG | + | chr5.2:69736382-69736401 | MS.gene29579:intron | 35.0% |
! | TTATGGAAAAGCCTTATCGA+TGG | + | chr5.2:69734848-69734867 | MS.gene29579:CDS | 35.0% |
! | TTCATTTTCTCTGCTTACCA+AGG | + | chr5.2:69738517-69738536 | MS.gene29579:intron | 35.0% |
! | TTCTTCCTGGAGTTTTTGTT+TGG | + | chr5.2:69739291-69739310 | MS.gene29579:intron | 35.0% |
! | TTTAGAATCTTGGTAAGAGG+TGG | + | chr5.2:69740155-69740174 | MS.gene29579:CDS | 35.0% |
! | TTTCCCCATCTAAACTTTTG+AGG | + | chr5.2:69739729-69739748 | MS.gene29579:intron | 35.0% |
! | TTTGGCATTGGATCAACATT+TGG | + | chr5.2:69740336-69740355 | MS.gene29579:CDS | 35.0% |
!! | AATTAATTACAGAGGCACCA+GGG | - | chr5.2:69738329-69738348 | None:intergenic | 35.0% |
!! | AGGTACTGAATTGGTTTCTA+CGG | + | chr5.2:69737197-69737216 | MS.gene29579:intron | 35.0% |
!! | CAATTGCTTTTCACTATGCT+TGG | + | chr5.2:69739071-69739090 | MS.gene29579:intron | 35.0% |
!! | GCAATATGTAGGTACTGAAT+TGG | + | chr5.2:69737188-69737207 | MS.gene29579:intron | 35.0% |
!! | GCATTTGTTTGCTTTTGCTA+TGG | + | chr5.2:69735320-69735339 | MS.gene29579:intron | 35.0% |
!! | TTGTTGATTTGTTGTCATGC+AGG | + | chr5.2:69738003-69738022 | MS.gene29579:intron | 35.0% |
!!! | ATGAGTTTTTTAGCGAGATG+GGG | + | chr5.2:69739817-69739836 | MS.gene29579:intron | 35.0% |
AAGTCCGATGTACGAGTATT+TGG | + | chr5.2:69740082-69740101 | MS.gene29579:CDS | 40.0% | |
ACTAACCTGCTAAGGATTCT+GGG | + | chr5.2:69737694-69737713 | MS.gene29579:intron | 40.0% | |
ACTCCCTTTAATCCCATGTT+TGG | - | chr5.2:69740111-69740130 | None:intergenic | 40.0% | |
AGAAACTTACGTGACATCTG+AGG | + | chr5.2:69739781-69739800 | MS.gene29579:intron | 40.0% | |
AGACTGTTTGAAAGAGCTCA+TGG | - | chr5.2:69736838-69736857 | None:intergenic | 40.0% | |
ATAATGTCAAGGGTCCAATC+TGG | + | chr5.2:69739511-69739530 | MS.gene29579:CDS | 40.0% | |
ATGTTCAGCCTAGAGATAGA+GGG | - | chr5.2:69738482-69738501 | None:intergenic | 40.0% | |
ATTAGATACCGTGATCTTGC+TGG | + | chr5.2:69736576-69736595 | MS.gene29579:CDS | 40.0% | |
ATTCCAAGAGCTGAAAGATG+AGG | - | chr5.2:69738124-69738143 | None:intergenic | 40.0% | |
ATTCCTCATCTTTCAGCTCT+TGG | + | chr5.2:69738118-69738137 | MS.gene29579:CDS | 40.0% | |
CACTACTACCAATCAAGGTA+TGG | - | chr5.2:69734993-69735012 | None:intergenic | 40.0% | |
CAGCTGAAATGCTACATACA+AGG | - | chr5.2:69738630-69738649 | None:intergenic | 40.0% | |
CCAGCTATGGCAATAAAATG+TGG | - | chr5.2:69738070-69738089 | None:intergenic | 40.0% | |
CTCATGAAATCTCCAAGGAA+TGG | - | chr5.2:69740218-69740237 | None:intergenic | 40.0% | |
GAGCTCATGGAAACATAGTA+TGG | - | chr5.2:69736825-69736844 | None:intergenic | 40.0% | |
GCTATGCTTCATGAATTTGG+TGG | + | chr5.2:69736543-69736562 | MS.gene29579:CDS | 40.0% | |
GTGCTATGACAATATATGCG+AGG | - | chr5.2:69738174-69738193 | None:intergenic | 40.0% | |
TAATGTCAAGGGTCCAATCT+GGG | + | chr5.2:69739512-69739531 | MS.gene29579:CDS | 40.0% | |
TACATAATCCCTGCGTATTC+TGG | + | chr5.2:69735472-69735491 | MS.gene29579:intron | 40.0% | |
TCATCATTCCCTCTATCTCT+AGG | + | chr5.2:69738471-69738490 | MS.gene29579:intron | 40.0% | |
TGACTGCACAAATTGAGATC+AGG | - | chr5.2:69737935-69737954 | None:intergenic | 40.0% | |
TGAGATACAGGTATGGTTCA+AGG | + | chr5.2:69739260-69739279 | MS.gene29579:intron | 40.0% | |
TGGAGTTCTGCCATTATATC+TGG | + | chr5.2:69739434-69739453 | MS.gene29579:CDS | 40.0% | |
TGGATATTCAGGGACCATTA+TGG | + | chr5.2:69736443-69736462 | MS.gene29579:CDS | 40.0% | |
TTACTCTGCAAATGTGGTCA+CGG | - | chr5.2:69735805-69735824 | None:intergenic | 40.0% | |
TTGAACCATACCTGTATCTC+AGG | - | chr5.2:69739261-69739280 | None:intergenic | 40.0% | |
TTGATCCGACCTCATCTAAT+GGG | + | chr5.2:69737850-69737869 | MS.gene29579:intron | 40.0% | |
TTGCACTTACAAGTTACGTG+TGG | - | chr5.2:69735522-69735541 | None:intergenic | 40.0% | |
TTTGATCCGACCTCATCTAA+TGG | + | chr5.2:69737849-69737868 | MS.gene29579:intron | 40.0% | |
! | AACACATCCTCCATGGATTT+TGG | - | chr5.2:69734883-69734902 | None:intergenic | 40.0% |
! | CAGTACCTCATTCACGATTT+TGG | - | chr5.2:69739983-69740002 | None:intergenic | 40.0% |
! | CCAATGCCAAAGCTTTTGAA+TGG | - | chr5.2:69740327-69740346 | None:intergenic | 40.0% |
! | CCACATTTTATTGCCATAGC+TGG | + | chr5.2:69738067-69738086 | MS.gene29579:CDS | 40.0% |
! | CCATTCAAAAGCTTTGGCAT+TGG | + | chr5.2:69740324-69740343 | MS.gene29579:CDS | 40.0% |
! | CCCTTTTGTCTCACGATTTT+TGG | + | chr5.2:69739650-69739669 | MS.gene29579:intron | 40.0% |
! | CTTTTCCCATTAGATGAGGT+CGG | - | chr5.2:69737858-69737877 | None:intergenic | 40.0% |
! | GAAAAGCATATTGCCTCACA+TGG | + | chr5.2:69737475-69737494 | MS.gene29579:CDS | 40.0% |
! | GAACGTTTCTGTTGATGAAG+AGG | + | chr5.2:69736185-69736204 | MS.gene29579:CDS | 40.0% |
! | TGAATGGACTTTGGCTCATA+CGG | + | chr5.2:69735076-69735095 | MS.gene29579:CDS | 40.0% |
! | TTACCTTGTTGTGAAGGCTA+GGG | + | chr5.2:69738927-69738946 | MS.gene29579:intron | 40.0% |
! | TTTACCTTGTTGTGAAGGCT+AGG | + | chr5.2:69738926-69738945 | MS.gene29579:intron | 40.0% |
!! | ATACTTGGTTTTCTGTTCCC+TGG | + | chr5.2:69738309-69738328 | MS.gene29579:intron | 40.0% |
!! | ATATAGTTCGACTCGGCTAT+CGG | + | chr5.2:69738961-69738980 | MS.gene29579:intron | 40.0% |
!! | ATTGGCTACATCATTTTGGC+TGG | + | chr5.2:69737531-69737550 | MS.gene29579:CDS | 40.0% |
!! | CAATTAATTACAGAGGCACC+AGG | - | chr5.2:69738330-69738349 | None:intergenic | 40.0% |
!! | TTGTGATTTTGGTCTTCTGC+TGG | + | chr5.2:69738557-69738576 | MS.gene29579:intron | 40.0% |
AAATTGGGGGACCAATATCG+TGG | - | chr5.2:69739693-69739712 | None:intergenic | 45.0% | |
AACCTGTGTCACCATCATGT+AGG | + | chr5.2:69735270-69735289 | MS.gene29579:intron | 45.0% | |
ACAAAATGACGCGACAAGCA+AGG | - | chr5.2:69737400-69737419 | None:intergenic | 45.0% | |
ACTACTCGTTCAGAGAAGTC+AGG | - | chr5.2:69739004-69739023 | None:intergenic | 45.0% | |
ACTGCACATCAAATCAGCAC+TGG | + | chr5.2:69736261-69736280 | MS.gene29579:CDS | 45.0% | |
AGGAATGCTTCCTGAGATAC+AGG | + | chr5.2:69739248-69739267 | MS.gene29579:CDS | 45.0% | |
AGGGACCATTATGGTTCCTT+TGG | + | chr5.2:69736452-69736471 | MS.gene29579:CDS | 45.0% | |
ATAAGCCCAGTATCCTGCAA+AGG | - | chr5.2:69739463-69739482 | None:intergenic | 45.0% | |
CCAACCCAAAGGAACCATAA+TGG | - | chr5.2:69736460-69736479 | None:intergenic | 45.0% | |
CCATTATGGTTCCTTTGGGT+TGG | + | chr5.2:69736457-69736476 | MS.gene29579:CDS | 45.0% | |
CCTAAACAACACATCCTCCA+TGG | - | chr5.2:69734890-69734909 | None:intergenic | 45.0% | |
CGACCTCATCTAATGGGAAA+AGG | + | chr5.2:69737856-69737875 | MS.gene29579:intron | 45.0% | |
CTCGTGTTCGCATACAATAC+AGG | + | chr5.2:69739228-69739247 | MS.gene29579:CDS | 45.0% | |
CTGCACAAATTGAGATCAGG+AGG | - | chr5.2:69737932-69737951 | None:intergenic | 45.0% | |
CTTATTTCCACAAGCTCTCG+AGG | - | chr5.2:69736780-69736799 | None:intergenic | 45.0% | |
GACTAACCTGCTAAGGATTC+TGG | + | chr5.2:69737693-69737712 | MS.gene29579:intron | 45.0% | |
GAGCCAAAGTCCATTCACAA+GGG | - | chr5.2:69735073-69735092 | None:intergenic | 45.0% | |
GATAGCGTCTCTTATGCTTC+TGG | + | chr5.2:69740048-69740067 | MS.gene29579:intron | 45.0% | |
GATGTTCAGCCTAGAGATAG+AGG | - | chr5.2:69738483-69738502 | None:intergenic | 45.0% | |
GCTCGAGATTATAGTGTTCC+AGG | + | chr5.2:69739159-69739178 | MS.gene29579:CDS | 45.0% | |
GGAACACTATAATCTCGAGC+TGG | - | chr5.2:69739159-69739178 | None:intergenic | 45.0% | |
GGCAACACTACTACCAATCA+AGG | - | chr5.2:69734998-69735017 | None:intergenic | 45.0% | |
GGGACCATTATGGTTCCTTT+GGG | + | chr5.2:69736453-69736472 | MS.gene29579:CDS | 45.0% | |
GGTTACCTTTGCAGGATACT+GGG | + | chr5.2:69739455-69739474 | MS.gene29579:CDS | 45.0% | |
GTTTCTCGACTAACCTGCTA+AGG | + | chr5.2:69737686-69737705 | MS.gene29579:intron | 45.0% | |
TCAGCTCTTGGAATTTGGCT+CGG | + | chr5.2:69738130-69738149 | MS.gene29579:CDS | 45.0% | |
TCCAATCTGGGTGAAAGTTG+TGG | + | chr5.2:69739524-69739543 | MS.gene29579:CDS | 45.0% | |
TGAGCCAAAGTCCATTCACA+AGG | - | chr5.2:69735074-69735093 | None:intergenic | 45.0% | |
TGAGGCTCATGAAATCTCCA+AGG | - | chr5.2:69740223-69740242 | None:intergenic | 45.0% | |
TGCTTCCTGAGATACAGGTA+TGG | + | chr5.2:69739253-69739272 | MS.gene29579:intron | 45.0% | |
TGGAGATTTCATGAGCCTCA+CGG | + | chr5.2:69740223-69740242 | MS.gene29579:CDS | 45.0% | |
TGGTTACCTTTGCAGGATAC+TGG | + | chr5.2:69739454-69739473 | MS.gene29579:CDS | 45.0% | |
TGTAGCAAAATTCACGCTGG+CGG | + | chr5.2:69736158-69736177 | MS.gene29579:CDS | 45.0% | |
TTGACAGGTGAAAGCTTGCA+TGG | - | chr5.2:69739865-69739884 | None:intergenic | 45.0% | |
TTGTCTGATCGTCGCCTATT+AGG | - | chr5.2:69739367-69739386 | None:intergenic | 45.0% | |
TTTGCAGGATACTGGGCTTA+TGG | + | chr5.2:69739462-69739481 | MS.gene29579:CDS | 45.0% | |
! | ACTTTGGCTCATACGGAATG+GGG | + | chr5.2:69735083-69735102 | MS.gene29579:CDS | 45.0% |
! | ATACGGAATGGGGTTTGGTA+TGG | + | chr5.2:69735093-69735112 | MS.gene29579:intron | 45.0% |
! | ATCCTACATGATGGTGACAC+AGG | - | chr5.2:69735275-69735294 | None:intergenic | 45.0% |
! | CTGATTTGATGTGCAGTGTC+TGG | - | chr5.2:69736258-69736277 | None:intergenic | 45.0% |
! | GAATGGGGTTTGGTATGGTA+TGG | + | chr5.2:69735098-69735117 | MS.gene29579:intron | 45.0% |
! | GACTTTGGCTCATACGGAAT+GGG | + | chr5.2:69735082-69735101 | MS.gene29579:CDS | 45.0% |
! | TCACCCTTGTGAATGGACTT+TGG | + | chr5.2:69735067-69735086 | MS.gene29579:CDS | 45.0% |
! | TGGAAAAGCCTTATCGATGG+TGG | + | chr5.2:69734851-69734870 | MS.gene29579:CDS | 45.0% |
! | TTTGGCTGGTTCAGCTTTGA+AGG | + | chr5.2:69737545-69737564 | MS.gene29579:CDS | 45.0% |
!! | ACAGGGTTTTGCGCCTTATT+AGG | + | chr5.2:69735042-69735061 | MS.gene29579:intron | 45.0% |
!! | AGCCTTATCGATGGTGGTTT+TGG | + | chr5.2:69734857-69734876 | MS.gene29579:CDS | 45.0% |
!! | ATGGTTCCTTTGGGTTGGAT+AGG | + | chr5.2:69736462-69736481 | MS.gene29579:CDS | 45.0% |
!! | CCATGGAGGATGTGTTGTTT+AGG | + | chr5.2:69734887-69734906 | MS.gene29579:CDS | 45.0% |
!! | GAAGTCAGGAAAGTGCTGAT+AGG | - | chr5.2:69738990-69739009 | None:intergenic | 45.0% |
!! | GCAACACTGAATTGATGACG+CGG | - | chr5.2:69739843-69739862 | None:intergenic | 45.0% |
!! | GTTTTGGCCAAAATCCATGG+AGG | + | chr5.2:69734873-69734892 | MS.gene29579:CDS | 45.0% |
!! | TATAGTTCGACTCGGCTATC+GGG | + | chr5.2:69738962-69738981 | MS.gene29579:intron | 45.0% |
!! | TGGAGGATGTGTTGTTTAGG+AGG | + | chr5.2:69734890-69734909 | MS.gene29579:CDS | 45.0% |
!!! | GTGGTTTTGGCCAAAATCCA+TGG | + | chr5.2:69734870-69734889 | MS.gene29579:CDS | 45.0% |
ACACCACCTATCCAACCCAA+AGG | - | chr5.2:69736471-69736490 | None:intergenic | 50.0% | |
AGTTGCGGCAACAGACATGA+TGG | - | chr5.2:69740369-69740388 | None:intergenic | 50.0% | |
ATGTGCTTATAGCTCCCGTG+AGG | - | chr5.2:69740241-69740260 | None:intergenic | 50.0% | |
CAAGACCCAGAATCCTTAGC+AGG | - | chr5.2:69737702-69737721 | None:intergenic | 50.0% | |
CACAAGGGTGACGCCTAATA+AGG | - | chr5.2:69735058-69735077 | None:intergenic | 50.0% | |
CATACTGCAGAGTCCATGTG+AGG | - | chr5.2:69737491-69737510 | None:intergenic | 50.0% | |
CTGCAAATGTGGTCACGGTA+TGG | - | chr5.2:69735800-69735819 | None:intergenic | 50.0% | |
GCCACAACTTTCACCCAGAT+TGG | - | chr5.2:69739528-69739547 | None:intergenic | 50.0% | |
GGAGATTTCATGAGCCTCAC+GGG | + | chr5.2:69740224-69740243 | MS.gene29579:CDS | 50.0% | |
GGCCAAAACCACCATCGATA+AGG | - | chr5.2:69734862-69734881 | None:intergenic | 50.0% | |
GGCTGTAGCAAAATTCACGC+TGG | + | chr5.2:69736155-69736174 | MS.gene29579:CDS | 50.0% | |
GGGGACCAAAATCGTGAATG+AGG | + | chr5.2:69739975-69739994 | MS.gene29579:intron | 50.0% | |
GGTCTTCTGCTGGTATTCAG+AGG | + | chr5.2:69738567-69738586 | MS.gene29579:intron | 50.0% | |
TCAGCTCTACTGCCATTCCT+TGG | + | chr5.2:69740203-69740222 | MS.gene29579:CDS | 50.0% | |
TGCACACACAAGTCCAGCTA+TGG | - | chr5.2:69738083-69738102 | None:intergenic | 50.0% | |
TTAGGCGTCACCCTTGTGAA+TGG | + | chr5.2:69735060-69735079 | MS.gene29579:intron | 50.0% | |
! | CAGAATCGTAGAGCACTTCG+AGG | - | chr5.2:69735909-69735928 | None:intergenic | 50.0% |
! | GGACTTTGGCTCATACGGAA+TGG | + | chr5.2:69735081-69735100 | MS.gene29579:CDS | 50.0% |
! | GTGGGGTTTGTGTTGACAAC+AGG | + | chr5.2:69736399-69736418 | MS.gene29579:CDS | 50.0% |
!! | GGTTGGATAGGTGGTGTTGT+TGG | + | chr5.2:69736474-69736493 | MS.gene29579:CDS | 50.0% |
!! | GTTCCTTTGGGTTGGATAGG+TGG | + | chr5.2:69736465-69736484 | MS.gene29579:CDS | 50.0% |
GGCTCATACGGAATGGGGTT+TGG | + | chr5.2:69735088-69735107 | MS.gene29579:CDS | 55.0% | |
! | AAGCTAGCCTCGAGAGCTTG+TGG | + | chr5.2:69736770-69736789 | MS.gene29579:intron | 55.0% |
! | GAGCCCTAGCCTTCACAACA+AGG | - | chr5.2:69738933-69738952 | None:intergenic | 55.0% |
CCGCAACTATTGCAGCGCTG+CGG | + | chr5.2:69740381-69740400 | MS.gene29579:CDS | 60.0% | |
CCGCAGCGCTGCAATAGTTG+CGG | - | chr5.2:69740384-69740403 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 69734808 | 69740451 | 69734808 | ID=MS.gene29579 |
chr5.2 | mRNA | 69734808 | 69740451 | 69734808 | ID=MS.gene29579.t1;Parent=MS.gene29579 |
chr5.2 | exon | 69734808 | 69734913 | 69734808 | ID=MS.gene29579.t1.exon1;Parent=MS.gene29579.t1 |
chr5.2 | CDS | 69734808 | 69734913 | 69734808 | ID=cds.MS.gene29579.t1;Parent=MS.gene29579.t1 |
chr5.2 | exon | 69735064 | 69735109 | 69735064 | ID=MS.gene29579.t1.exon2;Parent=MS.gene29579.t1 |
chr5.2 | CDS | 69735064 | 69735109 | 69735064 | ID=cds.MS.gene29579.t1;Parent=MS.gene29579.t1 |
chr5.2 | exon | 69736155 | 69736282 | 69736155 | ID=MS.gene29579.t1.exon3;Parent=MS.gene29579.t1 |
chr5.2 | CDS | 69736155 | 69736282 | 69736155 | ID=cds.MS.gene29579.t1;Parent=MS.gene29579.t1 |
chr5.2 | exon | 69736385 | 69736609 | 69736385 | ID=MS.gene29579.t1.exon4;Parent=MS.gene29579.t1 |
chr5.2 | CDS | 69736385 | 69736609 | 69736385 | ID=cds.MS.gene29579.t1;Parent=MS.gene29579.t1 |
chr5.2 | exon | 69737472 | 69737566 | 69737472 | ID=MS.gene29579.t1.exon5;Parent=MS.gene29579.t1 |
chr5.2 | CDS | 69737472 | 69737566 | 69737472 | ID=cds.MS.gene29579.t1;Parent=MS.gene29579.t1 |
chr5.2 | exon | 69738025 | 69738214 | 69738025 | ID=MS.gene29579.t1.exon6;Parent=MS.gene29579.t1 |
chr5.2 | CDS | 69738025 | 69738214 | 69738025 | ID=cds.MS.gene29579.t1;Parent=MS.gene29579.t1 |
chr5.2 | exon | 69739145 | 69739269 | 69739145 | ID=MS.gene29579.t1.exon7;Parent=MS.gene29579.t1 |
chr5.2 | CDS | 69739145 | 69739269 | 69739145 | ID=cds.MS.gene29579.t1;Parent=MS.gene29579.t1 |
chr5.2 | exon | 69739372 | 69739587 | 69739372 | ID=MS.gene29579.t1.exon8;Parent=MS.gene29579.t1 |
chr5.2 | CDS | 69739372 | 69739587 | 69739372 | ID=cds.MS.gene29579.t1;Parent=MS.gene29579.t1 |
chr5.2 | exon | 69740074 | 69740451 | 69740074 | ID=MS.gene29579.t1.exon9;Parent=MS.gene29579.t1 |
chr5.2 | CDS | 69740074 | 69740451 | 69740074 | ID=cds.MS.gene29579.t1;Parent=MS.gene29579.t1 |
Gene Sequence |
Protein sequence |