Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30201.t1 | XP_013451291.1 | 94.8 | 634 | 31 | 2 | 1 | 632 | 1 | 634 | 0.00E+00 | 1161.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30201.t1 | Q96GN5 | 46.6 | 118 | 58 | 2 | 40 | 155 | 340 | 454 | 4.0e-23 | 111.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30201.t1 | A0A072U7K4 | 94.8 | 634 | 31 | 2 | 1 | 632 | 1 | 634 | 0.0e+00 | 1161.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene30201.t1 | TR | DDT |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050297 | MS.gene30201 | 0.809769 | 1.61E-50 | -1.69E-46 |
| MS.gene050648 | MS.gene30201 | 0.811199 | 7.89E-51 | -1.69E-46 |
| MS.gene050838 | MS.gene30201 | 0.807502 | 4.90E-50 | -1.69E-46 |
| MS.gene051698 | MS.gene30201 | 0.800088 | 1.70E-48 | -1.69E-46 |
| MS.gene053143 | MS.gene30201 | 0.80773 | 4.38E-50 | -1.69E-46 |
| MS.gene05870 | MS.gene30201 | 0.819818 | 9.51E-53 | -1.69E-46 |
| MS.gene060283 | MS.gene30201 | 0.811382 | 7.20E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene30201 | MS.gene30198 | PPI |
| MS.gene074288 | MS.gene30201 | PPI |
| MS.gene30201 | MS.gene074289 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30201.t1 | MTR_6g017265 | 94.795 | 634 | 31 | 2 | 1 | 632 | 1 | 634 | 0.0 | 1199 |
| MS.gene30201.t1 | MTR_0024s0330 | 73.491 | 464 | 92 | 1 | 169 | 632 | 302 | 734 | 0.0 | 664 |
| MS.gene30201.t1 | MTR_0024s0330 | 77.990 | 209 | 37 | 3 | 1 | 208 | 1 | 201 | 1.26e-100 | 323 |
| MS.gene30201.t1 | MTR_5g018400 | 41.912 | 136 | 74 | 2 | 36 | 169 | 148 | 280 | 4.61e-25 | 108 |
| MS.gene30201.t1 | MTR_5g018470 | 42.857 | 119 | 59 | 2 | 36 | 151 | 150 | 262 | 1.26e-22 | 101 |
| MS.gene30201.t1 | MTR_4g087240 | 36.029 | 136 | 70 | 4 | 41 | 171 | 171 | 294 | 1.29e-18 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30201.t1 | AT5G38690 | 40.359 | 612 | 305 | 13 | 17 | 623 | 1 | 557 | 4.58e-127 | 387 |
| MS.gene30201.t1 | AT5G38690 | 40.359 | 612 | 305 | 13 | 17 | 623 | 1 | 557 | 4.58e-127 | 387 |
| MS.gene30201.t1 | AT1G67270 | 40.256 | 313 | 176 | 6 | 309 | 615 | 176 | 483 | 3.55e-52 | 187 |
| MS.gene30201.t1 | AT1G67270 | 63.248 | 117 | 43 | 0 | 28 | 144 | 2 | 118 | 2.00e-44 | 166 |
| MS.gene30201.t1 | AT1G67780 | 38.080 | 323 | 192 | 5 | 303 | 623 | 182 | 498 | 6.32e-52 | 187 |
| MS.gene30201.t1 | AT1G67780 | 66.667 | 120 | 40 | 0 | 25 | 144 | 7 | 126 | 9.99e-50 | 181 |
| MS.gene30201.t1 | AT1G67780 | 38.080 | 323 | 192 | 5 | 303 | 623 | 182 | 498 | 6.32e-52 | 187 |
| MS.gene30201.t1 | AT1G67780 | 66.667 | 120 | 40 | 0 | 25 | 144 | 7 | 126 | 9.99e-50 | 181 |
| MS.gene30201.t1 | AT2G23530 | 46.552 | 116 | 51 | 3 | 41 | 151 | 153 | 262 | 1.69e-23 | 105 |
| MS.gene30201.t1 | AT4G37110 | 41.129 | 124 | 58 | 3 | 41 | 155 | 76 | 193 | 1.82e-20 | 93.2 |
| MS.gene30201.t1 | AT4G37110 | 41.129 | 124 | 58 | 3 | 41 | 155 | 76 | 193 | 1.82e-20 | 93.2 |
| MS.gene30201.t1 | AT4G37110 | 41.129 | 124 | 58 | 3 | 41 | 155 | 158 | 275 | 6.83e-20 | 92.8 |
| MS.gene30201.t1 | AT4G37110 | 41.129 | 124 | 58 | 3 | 41 | 155 | 171 | 288 | 7.68e-20 | 92.8 |
Find 120 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTTCAAAAGAAGCTAATT+TGG | 0.197118 | 6.3:-13214592 | MS.gene30201:CDS |
| CAAATCTTCAGAAGCCTTCT+TGG | 0.214150 | 6.3:+13214638 | None:intergenic |
| AAACTCAAGGTCTAATATTT+TGG | 0.223991 | 6.3:+13213923 | None:intergenic |
| CAAGAAGGCTTCTGAAGATT+TGG | 0.251002 | 6.3:-13214637 | MS.gene30201:CDS |
| ATGTGGAAACAAAGGTTTAA+AGG | 0.266600 | 6.3:-13214342 | MS.gene30201:CDS |
| AGAATTACCTTGTAACAAAA+AGG | 0.268700 | 6.3:+13211582 | None:intergenic |
| CCGGCGGATTGGCTCAATAA+AGG | 0.311364 | 6.3:-13213034 | MS.gene30201:CDS |
| AAATTCATGGTTGAAAGTTC+TGG | 0.316231 | 6.3:-13213098 | MS.gene30201:CDS |
| AATGAAGCGGGAAAAGTTAA+AGG | 0.325185 | 6.3:-13214297 | MS.gene30201:CDS |
| CTTTATCTGTGATGAAGCTT+TGG | 0.335217 | 6.3:-13212960 | MS.gene30201:CDS |
| TCAAAGTCAACAGCTTGATT+TGG | 0.342350 | 6.3:+13213288 | None:intergenic |
| GCCACAAATGCCTCTTGAAC+AGG | 0.344140 | 6.3:-13215052 | MS.gene30201:intron |
| TCACGCGGTGTTCGTGTTAT+CGG | 0.347596 | 6.3:-13217240 | MS.gene30201:CDS |
| CAATGCATTCCCAACATCTT+CGG | 0.349577 | 6.3:+13213896 | None:intergenic |
| AACTAAACTGAAGTCATCTT+TGG | 0.351197 | 6.3:+13211363 | None:intergenic |
| TTTCTCTCATGCATTAGATT+AGG | 0.358747 | 6.3:+13214071 | None:intergenic |
| TGATGATCAAAATGCAATAT+TGG | 0.363141 | 6.3:-13212762 | MS.gene30201:CDS |
| ATAATAGCGGTAATGCATTC+TGG | 0.364125 | 6.3:-13211633 | MS.gene30201:CDS |
| GTTCATTCGGCCAAGGCATC+TGG | 0.374492 | 6.3:-13214687 | MS.gene30201:CDS |
| TTAGAATTCTGCAGAGTGTT+TGG | 0.375943 | 6.3:-13213867 | MS.gene30201:CDS |
| GAGGATTTGATTACTGAATC+TGG | 0.390946 | 6.3:-13213076 | MS.gene30201:CDS |
| ACATTTCCTCTAGGAGAGAT+TGG | 0.391866 | 6.3:-13211389 | MS.gene30201:CDS |
| GCAAAAGCTGCTATATCAAA+TGG | 0.394679 | 6.3:-13212556 | MS.gene30201:CDS |
| CGAATCTATGATTCTGAAAA+CGG | 0.402121 | 6.3:-13217213 | MS.gene30201:CDS |
| CATTAGCGGATATAATGATT+TGG | 0.411027 | 6.3:-13213011 | MS.gene30201:CDS |
| AAAAGAAGCTAATTTGGATA+AGG | 0.413397 | 6.3:-13214586 | MS.gene30201:intron |
| AAGTCTTAAGCAAAAGTTGC+AGG | 0.414891 | 6.3:-13212587 | MS.gene30201:CDS |
| TTTATCTGTGATGAAGCTTT+GGG | 0.420372 | 6.3:-13212959 | MS.gene30201:CDS |
| TGGTCAGATGGATGCTCCTA+AGG | 0.425400 | 6.3:-13214123 | MS.gene30201:CDS |
| TACTGGTATACTAGTTCATT+CGG | 0.430354 | 6.3:-13214700 | MS.gene30201:CDS |
| CAGAGTCATGGAATGATTCC+TGG | 0.431809 | 6.3:-13214143 | MS.gene30201:CDS |
| AATGAAAGCAGCAAAATCTA+AGG | 0.435911 | 6.3:-13212732 | MS.gene30201:CDS |
| GAGAATTGAACCTGAGTACT+TGG | 0.439150 | 6.3:-13211656 | MS.gene30201:CDS |
| AGGTAGATCTATTGAATGAT+TGG | 0.443425 | 6.3:-13214885 | MS.gene30201:CDS |
| ACACAAGGCTTCCCACCTCT+TGG | 0.444496 | 6.3:+13215086 | None:intergenic |
| AGTTTGCACCCGAAGATGTT+GGG | 0.446171 | 6.3:-13213905 | MS.gene30201:CDS |
| ACCTGTTCAAGAGGCATTTG+TGG | 0.447431 | 6.3:+13215051 | None:intergenic |
| TTGCAGATTCCTTTGCACTT+TGG | 0.454542 | 6.3:+13214856 | None:intergenic |
| GTGGGAAGCCTTGTGTCATC+AGG | 0.455659 | 6.3:-13215079 | MS.gene30201:CDS |
| GAAGAAATTCCTTTGCCCCT+TGG | 0.459527 | 6.3:-13213957 | MS.gene30201:CDS |
| AATGCATTCCCAACATCTTC+GGG | 0.470221 | 6.3:+13213897 | None:intergenic |
| TTCTCACTGCATCACAGCAT+TGG | 0.484712 | 6.3:+13211674 | None:intergenic |
| TGAATTTAGATATGGGGAAA+AGG | 0.485817 | 6.3:-13214914 | MS.gene30201:intron |
| ATCTAAGGTCGCTGAAGCTA+AGG | 0.488219 | 6.3:-13212717 | MS.gene30201:CDS |
| ATATGGGGAAAAGGCGGAAG+AGG | 0.489139 | 6.3:-13214905 | MS.gene30201:CDS |
| TCATTTGCAGAACAAGCCTT+AGG | 0.494943 | 6.3:+13214107 | None:intergenic |
| AAGAAATGCAGATGCTGATA+CGG | 0.495332 | 6.3:-13214180 | MS.gene30201:CDS |
| TTTATATCTTCAGGAAGCTA+AGG | 0.495609 | 6.3:-13212793 | MS.gene30201:intron |
| AAGTTAAAGGAAATATCTAA+TGG | 0.496876 | 6.3:-13214284 | MS.gene30201:CDS |
| GGTCGCTGAAGCTAAGGAAA+AGG | 0.499427 | 6.3:-13212711 | MS.gene30201:intron |
| ATCTCAGTGCCAAGGGGCAA+AGG | 0.499850 | 6.3:+13213948 | None:intergenic |
| ATGCATTAGATTAGGAATGA+AGG | 0.503395 | 6.3:+13214079 | None:intergenic |
| GTTGTTATTGTTGATGCGAA+TGG | 0.508281 | 6.3:-13217291 | MS.gene30201:CDS |
| GAAACTCCGTTGGAAAGTTT+AGG | 0.513228 | 6.3:+13214218 | None:intergenic |
| AATGAGTTGCTTGAGGCAAA+AGG | 0.514548 | 6.3:-13212463 | MS.gene30201:CDS |
| GAGAAGGAAAACTCATTATG+TGG | 0.515037 | 6.3:-13214359 | MS.gene30201:CDS |
| GTCAGCAATGCTTACCAAGA+AGG | 0.517036 | 6.3:-13214652 | MS.gene30201:CDS |
| CAAAAGCTGCTATATCAAAT+GGG | 0.521186 | 6.3:-13212555 | MS.gene30201:CDS |
| GCAAAAGTTGCAGGATGAGA+TGG | 0.522189 | 6.3:-13212578 | MS.gene30201:CDS |
| CAGGCTCTCGATCTTAAGAA+AGG | 0.525138 | 6.3:-13213389 | MS.gene30201:CDS |
| CATCATATTCTGAAATTGAG+AGG | 0.525339 | 6.3:+13212527 | None:intergenic |
| TATAGCATTTGTTTGAGACT+TGG | 0.529038 | 6.3:+13214004 | None:intergenic |
| CTTCAACACCGTCTTCATCA+TGG | 0.529243 | 6.3:+13211466 | None:intergenic |
| TTGAAAACAAGAAATCGAAA+AGG | 0.536877 | 6.3:-13214241 | MS.gene30201:CDS |
| AGAAAACAGAGAAAATGAAG+CGG | 0.538273 | 6.3:-13214310 | MS.gene30201:CDS |
| AGGTCTTCATCCTTAACTGC+TGG | 0.539184 | 6.3:-13213130 | MS.gene30201:CDS |
| AACTCATTATGTGGAAACAA+AGG | 0.544075 | 6.3:-13214350 | MS.gene30201:CDS |
| AGAGTTAAAACCAGATGCCT+TGG | 0.544879 | 6.3:+13214677 | None:intergenic |
| GAGTTTGCACCCGAAGATGT+TGG | 0.546808 | 6.3:-13213906 | MS.gene30201:CDS |
| TCACTAAGTACATTTCCTCT+AGG | 0.548858 | 6.3:-13211398 | MS.gene30201:CDS |
| TTGTGTTGAATTTAGATATG+GGG | 0.549696 | 6.3:-13214920 | MS.gene30201:intron |
| TGGAATGATTCCTGGTCAGA+TGG | 0.550104 | 6.3:-13214135 | MS.gene30201:CDS |
| AAAAGAGGTCATCAACCTAC+TGG | 0.550909 | 6.3:-13214717 | MS.gene30201:CDS |
| TCATCCTTAACTGCTGGCAA+TGG | 0.553708 | 6.3:-13213124 | MS.gene30201:CDS |
| CATCTTCGGGTGCAAACTCA+AGG | 0.554272 | 6.3:+13213910 | None:intergenic |
| TTTGGTCATCTCAGTGCCAA+GGG | 0.556107 | 6.3:+13213941 | None:intergenic |
| GATCTTAAGAAAGGAGAAGC+AGG | 0.557446 | 6.3:-13213380 | MS.gene30201:CDS |
| GAAAACAGAGAAAATGAAGC+GGG | 0.561741 | 6.3:-13214309 | MS.gene30201:CDS |
| TCTATCGTGGGAACCTGAGA+AGG | 0.565754 | 6.3:-13214375 | MS.gene30201:CDS |
| CATCACAGATAAAGTTCAGA+AGG | 0.568147 | 6.3:+13212969 | None:intergenic |
| TTCATGGTTGAAAGTTCTGG+AGG | 0.569469 | 6.3:-13213095 | MS.gene30201:CDS |
| TGGAGCTGAGCAGAAGGATG+AGG | 0.569888 | 6.3:-13211421 | MS.gene30201:CDS |
| ACAAAAGTAGAGCAGAGTCA+TGG | 0.571075 | 6.3:-13214155 | MS.gene30201:CDS |
| TGTTTATGGAGCTGAGCAGA+AGG | 0.575038 | 6.3:-13211427 | MS.gene30201:CDS |
| CTTTCCAACGGAGTTTCCGA+TGG | 0.577921 | 6.3:-13214212 | MS.gene30201:CDS |
| TGGCTCAATAAAGGCATTAG+CGG | 0.579791 | 6.3:-13213025 | MS.gene30201:CDS |
| CCGCTATTATCCAAGTACTC+AGG | 0.581440 | 6.3:+13211646 | None:intergenic |
| CCTTTATTGAGCCAATCCGC+CGG | 0.584341 | 6.3:+13213034 | None:intergenic |
| ATCACCATCGGAAACTCCGT+TGG | 0.585594 | 6.3:+13214208 | None:intergenic |
| AGCTTGTAGTGGATCTATCG+TGG | 0.595872 | 6.3:-13214388 | MS.gene30201:CDS |
| TTTGTAAGAATCCAAGAGGT+GGG | 0.597972 | 6.3:-13215097 | MS.gene30201:CDS |
| TTAGGAGCATCCATCTGACC+AGG | 0.598633 | 6.3:+13214125 | None:intergenic |
| AAACGGCAAATCTTGTCACC+AGG | 0.599421 | 6.3:-13217196 | MS.gene30201:intron |
| GGGAACCAAACCTGTTCAAG+AGG | 0.602392 | 6.3:+13215042 | None:intergenic |
| GCGACGTGGACAAAATGCCT+TGG | 0.606782 | 6.3:-13213321 | MS.gene30201:CDS |
| TATACTACAGGAGCTTGTAG+TGG | 0.607942 | 6.3:-13214399 | MS.gene30201:intron |
| TGGAATTGTCCAAAGTGCAA+AGG | 0.608508 | 6.3:-13214865 | MS.gene30201:CDS |
| ACTAAAACTGAAAGAGAGTG+AGG | 0.609276 | 6.3:-13217316 | MS.gene30201:CDS |
| ATAGCTGATGGTGAAAATGC+TGG | 0.614269 | 6.3:-13214029 | MS.gene30201:CDS |
| GCTTGTAGTGGATCTATCGT+GGG | 0.618962 | 6.3:-13214387 | MS.gene30201:CDS |
| ACGTGGACAAAATGCCTTGG+TGG | 0.621055 | 6.3:-13213318 | MS.gene30201:CDS |
| CAGCTATCACAACAGTACCT+TGG | 0.622207 | 6.3:+13214045 | None:intergenic |
| GTTTGTAAGAATCCAAGAGG+TGG | 0.622289 | 6.3:-13215098 | MS.gene30201:CDS |
| AGCTCGTAATGAGTTGCTTG+AGG | 0.624768 | 6.3:-13212470 | MS.gene30201:CDS |
| TGGCAGAACCTGATGACACA+AGG | 0.625463 | 6.3:+13215071 | None:intergenic |
| ATTTAGATATGGGGAAAAGG+CGG | 0.637070 | 6.3:-13214911 | MS.gene30201:intron |
| TATACTAGTTCATTCGGCCA+AGG | 0.638076 | 6.3:-13214694 | MS.gene30201:CDS |
| CCTGAGTACTTGGATAATAG+CGG | 0.652359 | 6.3:-13211646 | MS.gene30201:CDS |
| AAAAGGCCTAAACTTTCCAA+CGG | 0.658766 | 6.3:-13214224 | MS.gene30201:CDS |
| ATTCTGCAGAGTGTTTGGAA+AGG | 0.667054 | 6.3:-13213862 | MS.gene30201:intron |
| GGTACTGTTGTGATAGCTGA+TGG | 0.670403 | 6.3:-13214041 | MS.gene30201:CDS |
| TGGTAACCAATCTCTCCTAG+AGG | 0.673606 | 6.3:+13211383 | None:intergenic |
| ATGCATGAGAGAAATTGCCA+AGG | 0.684406 | 6.3:-13214062 | MS.gene30201:CDS |
| GCTGTTTGTAAGAATCCAAG+AGG | 0.685376 | 6.3:-13215101 | MS.gene30201:CDS |
| GAATGAACTAGTATACCAGT+AGG | 0.685417 | 6.3:+13214702 | None:intergenic |
| GATTTGGAACTCAACCACCA+AGG | 0.685839 | 6.3:+13213304 | None:intergenic |
| CGTAAGCAAAATTTGCGACG+TGG | 0.687278 | 6.3:-13213335 | MS.gene30201:CDS |
| GTGAAGATCCATGATGAAGA+CGG | 0.694027 | 6.3:-13211474 | MS.gene30201:CDS |
| TTGGTCATCTCAGTGCCAAG+GGG | 0.704568 | 6.3:+13213942 | None:intergenic |
| AGTCGTCGTAACAACTCACG+CGG | 0.765157 | 6.3:-13217255 | MS.gene30201:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAATAAAAAAAAAAA+AGG | + | chr6.3:13215851-13215870 | None:intergenic | 0.0% |
| !! | TGAAAAATAAAAAATTTCTT+TGG | - | chr6.3:13213258-13213277 | MS.gene30201:intron | 10.0% |
| !!! | ATTTGTTATTTCATTTTTAA+AGG | - | chr6.3:13215486-13215505 | MS.gene30201:intron | 10.0% |
| !!! | TTTAATTTGTATAGTATATT+TGG | - | chr6.3:13215519-13215538 | MS.gene30201:intron | 10.0% |
| !!! | TTTATTTTTCATATTAACTT+CGG | + | chr6.3:13213249-13213268 | None:intergenic | 10.0% |
| !!! | TTTGTTATTTCATTTTTAAA+GGG | - | chr6.3:13215487-13215506 | MS.gene30201:intron | 10.0% |
| !! | AAAACCAAATTAAAAAAAGA+GGG | + | chr6.3:13213686-13213705 | None:intergenic | 15.0% |
| !! | AAACTTCAGTATTTATAATT+GGG | - | chr6.3:13216441-13216460 | MS.gene30201:intron | 15.0% |
| !! | AAATTAAGATCAAATAAAGA+TGG | - | chr6.3:13212946-13212965 | MS.gene30201:intron | 15.0% |
| !! | AATCGAAAAAAATTATTTGA+TGG | - | chr6.3:13212818-13212837 | MS.gene30201:intron | 15.0% |
| !! | AATTAAGATCAAATAAAGAT+GGG | - | chr6.3:13212947-13212966 | MS.gene30201:intron | 15.0% |
| !! | ATCGAAAAAAATTATTTGAT+GGG | - | chr6.3:13212819-13212838 | MS.gene30201:intron | 15.0% |
| !! | CTAACTTAACTTATTATTAT+TGG | - | chr6.3:13215061-13215080 | MS.gene30201:CDS | 15.0% |
| !! | GAAAAATATTAATATCATTC+AGG | + | chr6.3:13216479-13216498 | None:intergenic | 15.0% |
| !! | GAGAATTTAATTCAATTTAA+AGG | + | chr6.3:13215213-13215232 | None:intergenic | 15.0% |
| !! | TAAAACCAAATTAAAAAAAG+AGG | + | chr6.3:13213687-13213706 | None:intergenic | 15.0% |
| !! | TAAACTTCAGTATTTATAAT+TGG | - | chr6.3:13216440-13216459 | MS.gene30201:intron | 15.0% |
| !!! | TAATTCTAAGGATTAATTTT+TGG | + | chr6.3:13215160-13215179 | None:intergenic | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+TGG | + | chr6.3:13212076-13212095 | None:intergenic | 15.0% |
| !!! | TCATTTTTGAAAATTATTGT+TGG | - | chr6.3:13211665-13211684 | MS.gene30201:CDS | 15.0% |
| !!! | TTATTTTTCATATTAACTTC+GGG | + | chr6.3:13213248-13213267 | None:intergenic | 15.0% |
| !!! | TTGAAAATATGTTTTGAATT+TGG | - | chr6.3:13213898-13213917 | MS.gene30201:CDS | 15.0% |
| !!! | TTTGTTTTCTTTTTAAGTTT+TGG | - | chr6.3:13215022-13215041 | MS.gene30201:intron | 15.0% |
| !! | AAACCAAATTAAAAAAAGAG+GGG | + | chr6.3:13213685-13213704 | None:intergenic | 20.0% |
| !! | AAAGATAAATTTGTGTTTGA+TGG | - | chr6.3:13214179-13214198 | MS.gene30201:CDS | 20.0% |
| !! | AAGTTAAAGGAAATATCTAA+TGG | - | chr6.3:13214420-13214439 | MS.gene30201:intron | 20.0% |
| !! | ACAATAATAATCTGAGAAAA+TGG | + | chr6.3:13212432-13212451 | None:intergenic | 20.0% |
| !! | GATCAAATTAATAATAGTCA+TGG | - | chr6.3:13215091-13215110 | MS.gene30201:CDS | 20.0% |
| !! | TCATATTCTTCATAAGAAAT+TGG | + | chr6.3:13216825-13216844 | None:intergenic | 20.0% |
| !! | TGGAAATTAAAAAGCTATAA+TGG | - | chr6.3:13217091-13217110 | MS.gene30201:intron | 20.0% |
| !! | TGTAATGTAATTGTTTAATG+TGG | - | chr6.3:13212510-13212529 | MS.gene30201:CDS | 20.0% |
| !! | TTTAATTAATTGGCTGAAAT+TGG | - | chr6.3:13213149-13213168 | MS.gene30201:intron | 20.0% |
| !! | TTTGATTAATGAGCTAAAAT+TGG | - | chr6.3:13212703-13212722 | MS.gene30201:intron | 20.0% |
| !! | TTTGTGTTGAATTTAGATAT+GGG | - | chr6.3:13213783-13213802 | MS.gene30201:intron | 20.0% |
| !!! | GATTTTCATAGTTGTTTTTA+TGG | - | chr6.3:13214263-13214282 | MS.gene30201:CDS | 20.0% |
| !!! | GTTTCTTGTTTTATGATTTT+TGG | - | chr6.3:13213321-13213340 | MS.gene30201:CDS | 20.0% |
| !!! | TCGATTTTTAACATTAACTT+GGG | + | chr6.3:13212804-13212823 | None:intergenic | 20.0% |
| !!! | TGAATTTTCTCTTATATCTT+TGG | - | chr6.3:13214878-13214897 | MS.gene30201:CDS | 20.0% |
| !!! | TTCGATTTTTAACATTAACT+TGG | + | chr6.3:13212805-13212824 | None:intergenic | 20.0% |
| !!! | TTTTCTGAAGGAAAAAAAAT+TGG | - | chr6.3:13211882-13211901 | MS.gene30201:intron | 20.0% |
| !!! | TTTTGTGTTGAATTTAGATA+TGG | - | chr6.3:13213782-13213801 | MS.gene30201:intron | 20.0% |
| ! | AAAAGAAGCTAATTTGGATA+AGG | - | chr6.3:13214118-13214137 | MS.gene30201:CDS | 25.0% |
| ! | AAAATGTGTACTTTGTTGAT+TGG | - | chr6.3:13213441-13213460 | MS.gene30201:intron | 25.0% |
| ! | AAACAATGAAGTAACAAGAA+AGG | + | chr6.3:13215814-13215833 | None:intergenic | 25.0% |
| ! | ACATAAATGGATGTTGTAAT+TGG | - | chr6.3:13212748-13212767 | MS.gene30201:CDS | 25.0% |
| ! | ACATTAAACAAGATAAAGAC+AGG | + | chr6.3:13215877-13215896 | None:intergenic | 25.0% |
| ! | ACCAACTGAATTTAACAAAT+TGG | + | chr6.3:13216793-13216812 | None:intergenic | 25.0% |
| ! | AGAAAATGAAGAATGAAAGA+AGG | + | chr6.3:13211548-13211567 | None:intergenic | 25.0% |
| ! | AGAAAGTAAATGAAATGTTG+TGG | + | chr6.3:13216519-13216538 | None:intergenic | 25.0% |
| ! | AGAATTACCTTGTAACAAAA+AGG | + | chr6.3:13217125-13217144 | None:intergenic | 25.0% |
| ! | AGATATGAACTCAAAGAATA+CGG | - | chr6.3:13212999-13213018 | MS.gene30201:CDS | 25.0% |
| ! | ATAATGTATCAATATCGTGT+CGG | - | chr6.3:13212100-13212119 | MS.gene30201:intron | 25.0% |
| ! | ATACACAAAATGGTACAAAA+TGG | + | chr6.3:13213935-13213954 | None:intergenic | 25.0% |
| ! | ATAGAGAACATGCAAATATA+TGG | - | chr6.3:13216927-13216946 | MS.gene30201:intron | 25.0% |
| ! | ATTAAACACAAATACAGACA+GGG | + | chr6.3:13212471-13212490 | None:intergenic | 25.0% |
| ! | GAAAGTAAATGAAATGTTGT+GGG | + | chr6.3:13216518-13216537 | None:intergenic | 25.0% |
| ! | GATTATGGGGTTTAATTAAT+TGG | - | chr6.3:13213139-13213158 | MS.gene30201:intron | 25.0% |
| ! | GTAAGTATCTCAATTTAAAC+TGG | - | chr6.3:13215774-13215793 | MS.gene30201:intron | 25.0% |
| ! | GTAGATAATGTATTGAAACA+AGG | - | chr6.3:13212918-13212937 | MS.gene30201:intron | 25.0% |
| ! | TAACATTGTAGGAAAAAAAG+AGG | - | chr6.3:13213972-13213991 | MS.gene30201:CDS | 25.0% |
| ! | TAAGAGAAAATTCAGCATAA+AGG | + | chr6.3:13214872-13214891 | None:intergenic | 25.0% |
| ! | TCTGAATGCTGAAAAAATTA+AGG | - | chr6.3:13214725-13214744 | MS.gene30201:intron | 25.0% |
| ! | TGATGATCAAAATGCAATAT+TGG | - | chr6.3:13215942-13215961 | MS.gene30201:intron | 25.0% |
| ! | TTACTTGTGAATCTGATTAT+GGG | - | chr6.3:13213125-13213144 | MS.gene30201:CDS | 25.0% |
| ! | TTGAAAACAAGAAATCGAAA+AGG | - | chr6.3:13214463-13214482 | MS.gene30201:intron | 25.0% |
| ! | TTGTGTTGAATTTAGATATG+GGG | - | chr6.3:13213784-13213803 | MS.gene30201:intron | 25.0% |
| ! | TTTACTTGTGAATCTGATTA+TGG | - | chr6.3:13213124-13213143 | MS.gene30201:CDS | 25.0% |
| !! | AAACTCAAGGTCTAATATTT+TGG | + | chr6.3:13214784-13214803 | None:intergenic | 25.0% |
| !! | AGTTACACACAATATCTTTT+TGG | - | chr6.3:13214981-13215000 | MS.gene30201:intron | 25.0% |
| !! | GTTTTTGTGAATGTGATTAT+TGG | - | chr6.3:13212637-13212656 | MS.gene30201:intron | 25.0% |
| !! | TGTCTTTATCTTGTTTAATG+TGG | - | chr6.3:13215876-13215895 | MS.gene30201:intron | 25.0% |
| !! | TTGGAATAAACTGTGATTTT+TGG | - | chr6.3:13215538-13215557 | MS.gene30201:intron | 25.0% |
| !! | TTTATCTTGTTTAATGTGGT+TGG | - | chr6.3:13215880-13215899 | MS.gene30201:intron | 25.0% |
| !! | TTTTGTACCATTTTGTGTAT+TGG | - | chr6.3:13213935-13213954 | MS.gene30201:CDS | 25.0% |
| !! | TTTTTCCTTATAACATTGCA+GGG | - | chr6.3:13217005-13217024 | MS.gene30201:intron | 25.0% |
| !!! | AAAATTATTTGATGGGTTGT+AGG | - | chr6.3:13212826-13212845 | MS.gene30201:intron | 25.0% |
| !!! | AAATTATTTGATGGGTTGTA+GGG | - | chr6.3:13212827-13212846 | MS.gene30201:intron | 25.0% |
| !!! | CGATTTTTAACATTAACTTG+GGG | + | chr6.3:13212803-13212822 | None:intergenic | 25.0% |
| !!! | GATGAAAAATGGTTTGTTTA+TGG | - | chr6.3:13217263-13217282 | MS.gene30201:CDS | 25.0% |
| !!! | GTTTTTTTATGACAACACTT+TGG | - | chr6.3:13216398-13216417 | MS.gene30201:intron | 25.0% |
| !!! | TCATGTTTGTTATATACTAC+AGG | - | chr6.3:13214293-13214312 | MS.gene30201:CDS | 25.0% |
| !!! | TCCAATTTGTTAAATTCAGT+TGG | - | chr6.3:13216789-13216808 | MS.gene30201:intron | 25.0% |
| !!! | TGAATTATGTCATTTTCTGA+AGG | - | chr6.3:13211870-13211889 | MS.gene30201:intron | 25.0% |
| !!! | TTTTCTTTTTAAGTTTTGGC+TGG | - | chr6.3:13215026-13215045 | MS.gene30201:intron | 25.0% |
| !!! | TTTTTTCCTTATAACATTGC+AGG | - | chr6.3:13217004-13217023 | MS.gene30201:intron | 25.0% |
| AAACATCAGAACATACGTTT+AGG | + | chr6.3:13216274-13216293 | None:intergenic | 30.0% | |
| AAATTCATGGTTGAAAGTTC+TGG | - | chr6.3:13215606-13215625 | MS.gene30201:intron | 30.0% | |
| AACTCATTATGTGGAAACAA+AGG | - | chr6.3:13214354-13214373 | MS.gene30201:CDS | 30.0% | |
| AATAGTCATGGCAAGAAATT+TGG | - | chr6.3:13215103-13215122 | MS.gene30201:CDS | 30.0% | |
| AATGAAAGCAGCAAAATCTA+AGG | - | chr6.3:13215972-13215991 | MS.gene30201:intron | 30.0% | |
| ACTCCATGCATAAATTTCTT+AGG | - | chr6.3:13216324-13216343 | MS.gene30201:intron | 30.0% | |
| AGAAAACAGAGAAAATGAAG+CGG | - | chr6.3:13214394-13214413 | MS.gene30201:intron | 30.0% | |
| AGCTAACACATTTGTTTACT+TGG | - | chr6.3:13213538-13213557 | MS.gene30201:intron | 30.0% | |
| AGGTAGATCTATTGAATGAT+TGG | - | chr6.3:13213819-13213838 | MS.gene30201:intron | 30.0% | |
| AGGTTAAAGAACTTGAATGT+TGG | - | chr6.3:13216376-13216395 | MS.gene30201:intron | 30.0% | |
| ATAATGTCTGAAGGTTTACT+CGG | - | chr6.3:13213295-13213314 | MS.gene30201:CDS | 30.0% | |
| ATGCATTAGATTAGGAATGA+AGG | + | chr6.3:13214628-13214647 | None:intergenic | 30.0% | |
| ATGTGGAAACAAAGGTTTAA+AGG | - | chr6.3:13214362-13214381 | MS.gene30201:CDS | 30.0% | |
| ATTATAATCAGAAACCCTAG+TGG | + | chr6.3:13211583-13211602 | None:intergenic | 30.0% | |
| ATTTGTTCCCATGTATAATC+AGG | - | chr6.3:13215296-13215315 | MS.gene30201:intron | 30.0% | |
| CAAAAGCTGCTATATCAAAT+GGG | - | chr6.3:13216149-13216168 | MS.gene30201:intron | 30.0% | |
| CAAACAAATGCACTTGATTA+AGG | - | chr6.3:13216900-13216919 | MS.gene30201:intron | 30.0% | |
| CATTAAACACAAATACAGAC+AGG | + | chr6.3:13212472-13212491 | None:intergenic | 30.0% | |
| CCTATTGCAAAGTAATTCTA+AGG | + | chr6.3:13215172-13215191 | None:intergenic | 30.0% | |
| CCTTAGAATTACTTTGCAAT+AGG | - | chr6.3:13215169-13215188 | MS.gene30201:intron | 30.0% | |
| CTTAATCAAGTGCATTTGTT+TGG | + | chr6.3:13216902-13216921 | None:intergenic | 30.0% | |
| CTTGACATAGCAATTATGAA+CGG | + | chr6.3:13215267-13215286 | None:intergenic | 30.0% | |
| GAATGACACCATTAAGATTT+AGG | - | chr6.3:13217170-13217189 | MS.gene30201:intron | 30.0% | |
| GATACTTGCTTTATATCTTC+AGG | - | chr6.3:13215902-13215921 | MS.gene30201:intron | 30.0% | |
| GCAATAATGGTTGTTGTAAT+TGG | - | chr6.3:13213194-13213213 | MS.gene30201:intron | 30.0% | |
| GTAACTAACAATAGCGTTTA+AGG | + | chr6.3:13214967-13214986 | None:intergenic | 30.0% | |
| GTCTGTATTTGTGTTTAATG+TGG | - | chr6.3:13212472-13212491 | MS.gene30201:CDS | 30.0% | |
| TACTGGTATACTAGTTCATT+CGG | - | chr6.3:13214004-13214023 | MS.gene30201:CDS | 30.0% | |
| TACTTCTTTAACATCCAAAC+TGG | - | chr6.3:13216861-13216880 | MS.gene30201:intron | 30.0% | |
| TACTTGTGAATCTGATTATG+GGG | - | chr6.3:13213126-13213145 | MS.gene30201:CDS | 30.0% | |
| TAGATCTGAACTCAAGAATA+CGG | + | chr6.3:13211981-13212000 | None:intergenic | 30.0% | |
| TCAACCAGTTGTATTGTTAA+TGG | - | chr6.3:13216701-13216720 | MS.gene30201:intron | 30.0% | |
| TGAAAGAAGAGTAACATTGT+AGG | - | chr6.3:13213961-13213980 | MS.gene30201:CDS | 30.0% | |
| TGAATTTAGATATGGGGAAA+AGG | - | chr6.3:13213790-13213809 | MS.gene30201:intron | 30.0% | |
| TGCTATAGCCTAAATCTTAA+TGG | + | chr6.3:13217181-13217200 | None:intergenic | 30.0% | |
| TTAAACACAAATACAGACAG+GGG | + | chr6.3:13212470-13212489 | None:intergenic | 30.0% | |
| TTACCAAATAAAGTCCAGTT+TGG | + | chr6.3:13216878-13216897 | None:intergenic | 30.0% | |
| TTCAGAACCAATACACAAAA+TGG | + | chr6.3:13213945-13213964 | None:intergenic | 30.0% | |
| TTGTGAATGTGATTATTGGA+AGG | - | chr6.3:13212641-13212660 | MS.gene30201:intron | 30.0% | |
| TTGTGTCAACTACAGAAAAA+TGG | + | chr6.3:13214160-13214179 | None:intergenic | 30.0% | |
| TTTATATCTTCAGGAAGCTA+AGG | - | chr6.3:13215911-13215930 | MS.gene30201:intron | 30.0% | |
| TTTATCTGTGATGAAGCTTT+GGG | - | chr6.3:13215745-13215764 | MS.gene30201:intron | 30.0% | |
| TTTCTCTCATGCATTAGATT+AGG | + | chr6.3:13214636-13214655 | None:intergenic | 30.0% | |
| ! | AAATGTGTTAGCTTCAAAAC+TGG | + | chr6.3:13213531-13213550 | None:intergenic | 30.0% |
| ! | ACTGGTCTATGACTTATTAT+GGG | - | chr6.3:13213400-13213419 | MS.gene30201:intron | 30.0% |
| ! | ATTTCTTTTCACATCACCAT+CGG | + | chr6.3:13214511-13214530 | None:intergenic | 30.0% |
| ! | CATTAGCGGATATAATGATT+TGG | - | chr6.3:13215693-13215712 | MS.gene30201:intron | 30.0% |
| ! | CATTCAAGTTCTTTAACCTT+AGG | + | chr6.3:13216375-13216394 | None:intergenic | 30.0% |
| ! | CGAATCTATGATTCTGAAAA+CGG | - | chr6.3:13211491-13211510 | MS.gene30201:intron | 30.0% |
| ! | GAATATGCCTTTTTGTTACA+AGG | - | chr6.3:13217115-13217134 | MS.gene30201:intron | 30.0% |
| ! | TATAGCATTTGTTTGAGACT+TGG | + | chr6.3:13214703-13214722 | None:intergenic | 30.0% |
| ! | TTTCAATTGCATTGATGAAG+AGG | + | chr6.3:13214216-13214235 | None:intergenic | 30.0% |
| !! | AGATCTATATAGTTCTGACA+CGG | - | chr6.3:13211637-13211656 | MS.gene30201:CDS | 30.0% |
| !! | CATCATATTCTGAAATTGAG+AGG | + | chr6.3:13216180-13216199 | None:intergenic | 30.0% |
| !! | GTAGTTTATAAGAGTACCTA+AGG | - | chr6.3:13216356-13216375 | MS.gene30201:intron | 30.0% |
| !! | GTGTTGAAGTTGATGAAAAA+TGG | - | chr6.3:13217252-13217271 | MS.gene30201:CDS | 30.0% |
| !! | TCCAAATTAGCTTCTTTTGA+AGG | + | chr6.3:13214116-13214135 | None:intergenic | 30.0% |
| !! | TTCATTTTTAAAGGGTGAGA+GGG | - | chr6.3:13215495-13215514 | MS.gene30201:intron | 30.0% |
| !! | TTTCATTTTTAAAGGGTGAG+AGG | - | chr6.3:13215494-13215513 | MS.gene30201:intron | 30.0% |
| !!! | GTTCCCCTCTTTTTTTAATT+TGG | - | chr6.3:13213679-13213698 | MS.gene30201:intron | 30.0% |
| !!! | GTTTGTTTTATTCTGAGATG+TGG | - | chr6.3:13213349-13213368 | MS.gene30201:CDS | 30.0% |
| AAAAGGCCTAAACTTTCCAA+CGG | - | chr6.3:13214480-13214499 | MS.gene30201:intron | 35.0% | |
| AAAGGTAAGATGATACAAGG+TGG | - | chr6.3:13216011-13216030 | MS.gene30201:intron | 35.0% | |
| AAGAAATGCAGATGCTGATA+CGG | - | chr6.3:13214524-13214543 | MS.gene30201:intron | 35.0% | |
| AAGGTTAGAAATGAAGAACC+TGG | + | chr6.3:13211529-13211548 | None:intergenic | 35.0% | |
| AAGTCTTAAGCAAAAGTTGC+AGG | - | chr6.3:13216117-13216136 | MS.gene30201:intron | 35.0% | |
| AATGAAGCGGGAAAAGTTAA+AGG | - | chr6.3:13214407-13214426 | MS.gene30201:intron | 35.0% | |
| ACACAATACATATTCGACAC+CGG | - | chr6.3:13212324-13212343 | MS.gene30201:intron | 35.0% | |
| ACACTTTGGCTAAGGTATAT+AGG | - | chr6.3:13216412-13216431 | MS.gene30201:intron | 35.0% | |
| ACTAAAACTGAAAGAGAGTG+AGG | - | chr6.3:13211388-13211407 | MS.gene30201:CDS | 35.0% | |
| AGTTGTCTTAGTTTCGTGTT+CGG | - | chr6.3:13211691-13211710 | MS.gene30201:intron | 35.0% | |
| ATAATAGCGGTAATGCATTC+TGG | - | chr6.3:13217071-13217090 | MS.gene30201:intron | 35.0% | |
| ATGAAGCATAGACTCAAACA+TGG | - | chr6.3:13212017-13212036 | MS.gene30201:intron | 35.0% | |
| ATGCTATTACAGGAGAACTT+TGG | - | chr6.3:13216657-13216676 | MS.gene30201:intron | 35.0% | |
| ATTTAGATATGGGGAAAAGG+CGG | - | chr6.3:13213793-13213812 | MS.gene30201:intron | 35.0% | |
| CATCACAGATAAAGTTCAGA+AGG | + | chr6.3:13215738-13215757 | None:intergenic | 35.0% | |
| CATCCAAACTGGACTTTATT+TGG | - | chr6.3:13216872-13216891 | MS.gene30201:intron | 35.0% | |
| CCACCTAAGAAATTTATGCA+TGG | + | chr6.3:13216330-13216349 | None:intergenic | 35.0% | |
| CCATGCATAAATTTCTTAGG+TGG | - | chr6.3:13216327-13216346 | MS.gene30201:intron | 35.0% | |
| CTGGCAATGGAAAAAATTCA+TGG | - | chr6.3:13215593-13215612 | MS.gene30201:intron | 35.0% | |
| CTGGTCTATGACTTATTATG+GGG | - | chr6.3:13213401-13213420 | MS.gene30201:intron | 35.0% | |
| CTTTATCTGTGATGAAGCTT+TGG | - | chr6.3:13215744-13215763 | MS.gene30201:intron | 35.0% | |
| GAAAACAGAGAAAATGAAGC+GGG | - | chr6.3:13214395-13214414 | MS.gene30201:intron | 35.0% | |
| GAATGAACTAGTATACCAGT+AGG | + | chr6.3:13214005-13214024 | None:intergenic | 35.0% | |
| GAGAAGGAAAACTCATTATG+TGG | - | chr6.3:13214345-13214364 | MS.gene30201:CDS | 35.0% | |
| GAGGATTTGATTACTGAATC+TGG | - | chr6.3:13215628-13215647 | MS.gene30201:intron | 35.0% | |
| GCAAAAGCTGCTATATCAAA+TGG | - | chr6.3:13216148-13216167 | MS.gene30201:intron | 35.0% | |
| GCAACCATTAACAATACAAC+TGG | + | chr6.3:13216708-13216727 | None:intergenic | 35.0% | |
| GCCTTCAAAAGAAGCTAATT+TGG | - | chr6.3:13214112-13214131 | MS.gene30201:CDS | 35.0% | |
| GGAAAAGGTAAGATGATACA+AGG | - | chr6.3:13216008-13216027 | MS.gene30201:intron | 35.0% | |
| GTTGTGTACATGTTATCTAC+AGG | - | chr6.3:13216090-13216109 | MS.gene30201:intron | 35.0% | |
| TAACATTAACATGAGCCACA+TGG | + | chr6.3:13216613-13216632 | None:intergenic | 35.0% | |
| TAGACTGTTGTAGTAGTTGT+AGG | - | chr6.3:13211943-13211962 | MS.gene30201:intron | 35.0% | |
| TATGACTTATTATGGGGCAT+TGG | - | chr6.3:13213407-13213426 | MS.gene30201:intron | 35.0% | |
| TCAAAGTCAACAGCTTGATT+TGG | + | chr6.3:13215419-13215438 | None:intergenic | 35.0% | |
| TCAATGTTCTGCTATTGCAA+TGG | - | chr6.3:13216972-13216991 | MS.gene30201:intron | 35.0% | |
| TCACTAAGTACATTTCCTCT+AGG | - | chr6.3:13217306-13217325 | MS.gene30201:CDS | 35.0% | |
| TCTTGTGTTGTCGACATAAA+TGG | - | chr6.3:13212735-13212754 | MS.gene30201:CDS | 35.0% | |
| TGGATTCAACACTTCATTCA+AGG | + | chr6.3:13216593-13216612 | None:intergenic | 35.0% | |
| TGTTTGAGTCTATGCTTCAT+AGG | + | chr6.3:13212017-13212036 | None:intergenic | 35.0% | |
| TTATGACAACACTTTGGCTA+AGG | - | chr6.3:13216404-13216423 | MS.gene30201:intron | 35.0% | |
| TTTGTAAGAATCCAAGAGGT+GGG | - | chr6.3:13213607-13213626 | MS.gene30201:intron | 35.0% | |
| ! | ATGACTTATTATGGGGCATT+GGG | - | chr6.3:13213408-13213427 | MS.gene30201:intron | 35.0% |
| ! | CACTGGTCTATGACTTATTA+TGG | - | chr6.3:13213399-13213418 | MS.gene30201:intron | 35.0% |
| ! | CATAATGAGTTTTCCTTCTC+AGG | + | chr6.3:13214345-13214364 | None:intergenic | 35.0% |
| ! | CATATGTGTTGATGTCAAGT+CGG | - | chr6.3:13212295-13212314 | MS.gene30201:intron | 35.0% |
| ! | CTGATTTGATTCAACCACTA+GGG | - | chr6.3:13211566-13211585 | MS.gene30201:intron | 35.0% |
| ! | GTACTTTGTTGATTGGTTGT+AGG | - | chr6.3:13213448-13213467 | MS.gene30201:intron | 35.0% |
| ! | GTTGTTATTGTTGATGCGAA+TGG | - | chr6.3:13211413-13211432 | MS.gene30201:CDS | 35.0% |
| ! | TCTGATTTGATTCAACCACT+AGG | - | chr6.3:13211565-13211584 | MS.gene30201:intron | 35.0% |
| ! | TGTAGTGTGATAATGTCTGA+AGG | - | chr6.3:13213286-13213305 | MS.gene30201:CDS | 35.0% |
| ! | TTAGAATTCTGCAGAGTGTT+TGG | - | chr6.3:13214837-13214856 | MS.gene30201:intron | 35.0% |
| ! | TTGTAGGGTGATGATTTTGA+AGG | - | chr6.3:13212842-13212861 | MS.gene30201:intron | 35.0% |
| !! | AATGAAGTGTTGAATCCATG+TGG | - | chr6.3:13216595-13216614 | MS.gene30201:intron | 35.0% |
| !! | CTGTGATTTTTGGATCACTT+TGG | - | chr6.3:13215548-13215567 | MS.gene30201:intron | 35.0% |
| !! | TGTAGGATGATGATGTTTTG+AGG | - | chr6.3:13213465-13213484 | MS.gene30201:intron | 35.0% |
| !! | TTTTTGGATCACTTTGGTGT+AGG | - | chr6.3:13215554-13215573 | MS.gene30201:intron | 35.0% |
| !!! | AAGTTTTGGCTGGTTTAGTT+GGG | - | chr6.3:13215036-13215055 | MS.gene30201:intron | 35.0% |
| !!! | TAAGTTTTGGCTGGTTTAGT+TGG | - | chr6.3:13215035-13215054 | MS.gene30201:intron | 35.0% |
| AAAAGAGGTCATCAACCTAC+TGG | - | chr6.3:13213987-13214006 | MS.gene30201:CDS | 40.0% | |
| AAATGCCTCTTGAACAGGTT+TGG | - | chr6.3:13213657-13213676 | MS.gene30201:intron | 40.0% | |
| AATGAGTTGCTTGAGGCAAA+AGG | - | chr6.3:13216241-13216260 | MS.gene30201:intron | 40.0% | |
| AATGCATTCCCAACATCTTC+GGG | + | chr6.3:13214810-13214829 | None:intergenic | 40.0% | |
| ACAAAAGTAGAGCAGAGTCA+TGG | - | chr6.3:13214549-13214568 | MS.gene30201:intron | 40.0% | |
| ACACGATACATATCTGTCAC+TGG | - | chr6.3:13212129-13212148 | MS.gene30201:intron | 40.0% | |
| ACAGGAGAACTTTGGATTCA+TGG | - | chr6.3:13216665-13216684 | MS.gene30201:intron | 40.0% | |
| AGAGTTAAAACCAGATGCCT+TGG | + | chr6.3:13214030-13214049 | None:intergenic | 40.0% | |
| ATAGACTCAAACATGGACAC+TGG | - | chr6.3:13212024-13212043 | MS.gene30201:intron | 40.0% | |
| ATCGAGAGCCTGATTATACA+TGG | + | chr6.3:13215307-13215326 | None:intergenic | 40.0% | |
| ATGAACACCATGTGACAGTT+TGG | + | chr6.3:13216067-13216086 | None:intergenic | 40.0% | |
| ATGCATGAGAGAAATTGCCA+AGG | - | chr6.3:13214642-13214661 | MS.gene30201:CDS | 40.0% | |
| ATGTCAGACACAACACATGT+CGG | + | chr6.3:13211832-13211851 | None:intergenic | 40.0% | |
| CAAATCTTCAGAAGCCTTCT+TGG | + | chr6.3:13214069-13214088 | None:intergenic | 40.0% | |
| CAATGCATTCCCAACATCTT+CGG | + | chr6.3:13214811-13214830 | None:intergenic | 40.0% | |
| CACAATACATATTCGACACC+GGG | - | chr6.3:13212325-13212344 | MS.gene30201:intron | 40.0% | |
| CACGATACATATCTGTCACT+GGG | - | chr6.3:13212130-13212149 | MS.gene30201:intron | 40.0% | |
| CAGTCTTTGCATGTAAGTTG+TGG | - | chr6.3:13213874-13213893 | MS.gene30201:CDS | 40.0% | |
| CAGTGTGTTGTCAGCAATAA+TGG | - | chr6.3:13213181-13213200 | MS.gene30201:intron | 40.0% | |
| CCTGAGTACTTGGATAATAG+CGG | - | chr6.3:13217058-13217077 | MS.gene30201:intron | 40.0% | |
| CTACTAGATGCAGCAGTAAA+AGG | + | chr6.3:13214911-13214930 | None:intergenic | 40.0% | |
| GAAACTCCGTTGGAAAGTTT+AGG | + | chr6.3:13214489-13214508 | None:intergenic | 40.0% | |
| GAGAATTGAACCTGAGTACT+TGG | - | chr6.3:13217048-13217067 | MS.gene30201:intron | 40.0% | |
| GATCTTAAGAAAGGAGAAGC+AGG | - | chr6.3:13215324-13215343 | MS.gene30201:intron | 40.0% | |
| GATGTTGCTACTACTTAGCA+TGG | - | chr6.3:13212588-13212607 | MS.gene30201:CDS | 40.0% | |
| GATTAAGCATGTCATGGTCT+CGG | + | chr6.3:13212169-13212188 | None:intergenic | 40.0% | |
| GCTGTTTGTAAGAATCCAAG+AGG | - | chr6.3:13213603-13213622 | MS.gene30201:intron | 40.0% | |
| GTGAAGATCCATGATGAAGA+CGG | - | chr6.3:13217230-13217249 | MS.gene30201:CDS | 40.0% | |
| GTGGCTCATGTTAATGTTAG+CGG | - | chr6.3:13216614-13216633 | MS.gene30201:intron | 40.0% | |
| GTTTGTAAGAATCCAAGAGG+TGG | - | chr6.3:13213606-13213625 | MS.gene30201:intron | 40.0% | |
| TACAACAGTCTATGAAGCAC+CGG | + | chr6.3:13211935-13211954 | None:intergenic | 40.0% | |
| TATACTACAGGAGCTTGTAG+TGG | - | chr6.3:13214305-13214324 | MS.gene30201:CDS | 40.0% | |
| TATACTAGTTCATTCGGCCA+AGG | - | chr6.3:13214010-13214029 | MS.gene30201:CDS | 40.0% | |
| TCAACTCAGTGCAGATAGTA+GGG | + | chr6.3:13216555-13216574 | None:intergenic | 40.0% | |
| TCATAAGATTATGCGTGTCC+CGG | + | chr6.3:13212346-13212365 | None:intergenic | 40.0% | |
| TCATTTGCAGAACAAGCCTT+AGG | + | chr6.3:13214600-13214619 | None:intergenic | 40.0% | |
| TCGAGAGCCTGATTATACAT+GGG | + | chr6.3:13215306-13215325 | None:intergenic | 40.0% | |
| TGACACAACATTGACACATG+TGG | - | chr6.3:13212391-13212410 | MS.gene30201:intron | 40.0% | |
| TGCTATTCCAAACTGTCACA+TGG | - | chr6.3:13216057-13216076 | MS.gene30201:intron | 40.0% | |
| TGGAATTGTCCAAAGTGCAA+AGG | - | chr6.3:13213839-13213858 | MS.gene30201:intron | 40.0% | |
| TGGCTCATGTTAATGTTAGC+GGG | - | chr6.3:13216615-13216634 | MS.gene30201:intron | 40.0% | |
| TGGTTCCCTGCAATGTTATA+AGG | + | chr6.3:13217013-13217032 | None:intergenic | 40.0% | |
| TTGCAGATTCCTTTGCACTT+TGG | + | chr6.3:13213851-13213870 | None:intergenic | 40.0% | |
| ! | AATGTTAGCGGGTATAGTAC+TGG | - | chr6.3:13216626-13216645 | MS.gene30201:intron | 40.0% |
| ! | ACATTTCCTCTAGGAGAGAT+TGG | - | chr6.3:13217315-13217334 | MS.gene30201:CDS | 40.0% |
| ! | ATAGCTGATGGTGAAAATGC+TGG | - | chr6.3:13214675-13214694 | MS.gene30201:CDS | 40.0% |
| ! | ATTCTGCAGAGTGTTTGGAA+AGG | - | chr6.3:13214842-13214861 | MS.gene30201:CDS | 40.0% |
| ! | CAAGAAGGCTTCTGAAGATT+TGG | - | chr6.3:13214067-13214086 | MS.gene30201:CDS | 40.0% |
| ! | GGTTTTCCACATTGAAGTGT+CGG | - | chr6.3:13213559-13213578 | MS.gene30201:intron | 40.0% |
| ! | TTCATGGTTGAAAGTTCTGG+AGG | - | chr6.3:13215609-13215628 | MS.gene30201:intron | 40.0% |
| ! | TTTTCCATTGCCAGCAGTTA+AGG | + | chr6.3:13215587-13215606 | None:intergenic | 40.0% |
| ! | TTTTTGCCGACACTTCAATG+TGG | + | chr6.3:13213568-13213587 | None:intergenic | 40.0% |
| !! | GAAGTGTCGGCAAAAAACAA+TGG | - | chr6.3:13213572-13213591 | MS.gene30201:intron | 40.0% |
| !! | TATGCTATGAAGCACTGACA+CGG | - | chr6.3:13212239-13212258 | MS.gene30201:intron | 40.0% |
| !! | TGACTAGCTTGAAACTGTGT+TGG | - | chr6.3:13213495-13213514 | MS.gene30201:intron | 40.0% |
| !! | TGGCTCAATAAAGGCATTAG+CGG | - | chr6.3:13215679-13215698 | MS.gene30201:intron | 40.0% |
| !! | TTCTGAGATGTGGTGATTTC+TGG | - | chr6.3:13213359-13213378 | MS.gene30201:CDS | 40.0% |
| !!! | AGTTTTGGCTGGTTTAGTTG+GGG | - | chr6.3:13215037-13215056 | MS.gene30201:intron | 40.0% |
| AAACGGCAAATCTTGTCACC+AGG | - | chr6.3:13211508-13211527 | MS.gene30201:intron | 45.0% | |
| AAATACAGACAGGGGACAAG+AGG | + | chr6.3:13212462-13212481 | None:intergenic | 45.0% | |
| AATGGTTGCTGTCATTCGCT+TGG | - | chr6.3:13216719-13216738 | MS.gene30201:intron | 45.0% | |
| ACATGACACTGCACAGAAAG+TGG | - | chr6.3:13213064-13213083 | MS.gene30201:CDS | 45.0% | |
| ACCATGACATGCTTAATCCG+AGG | - | chr6.3:13212171-13212190 | MS.gene30201:intron | 45.0% | |
| AGCTCGTAATGAGTTGCTTG+AGG | - | chr6.3:13216234-13216253 | MS.gene30201:intron | 45.0% | |
| AGGTCTTCATCCTTAACTGC+TGG | - | chr6.3:13215574-13215593 | MS.gene30201:intron | 45.0% | |
| AGTTTGCACCCGAAGATGTT+GGG | - | chr6.3:13214799-13214818 | MS.gene30201:intron | 45.0% | |
| CAGAGTCATGGAATGATTCC+TGG | - | chr6.3:13214561-13214580 | MS.gene30201:intron | 45.0% | |
| CAGCTATCACAACAGTACCT+TGG | + | chr6.3:13214662-13214681 | None:intergenic | 45.0% | |
| CAGGCTCTCGATCTTAAGAA+AGG | - | chr6.3:13215315-13215334 | MS.gene30201:intron | 45.0% | |
| CATGACACTGCACAGAAAGT+GGG | - | chr6.3:13213065-13213084 | MS.gene30201:CDS | 45.0% | |
| CCGCTATTATCCAAGTACTC+AGG | + | chr6.3:13217061-13217080 | None:intergenic | 45.0% | |
| CGTAAGCAAAATTTGCGACG+TGG | - | chr6.3:13215369-13215388 | MS.gene30201:intron | 45.0% | |
| CTCAACTCAGTGCAGATAGT+AGG | + | chr6.3:13216556-13216575 | None:intergenic | 45.0% | |
| CTTCAACACCGTCTTCATCA+TGG | + | chr6.3:13217241-13217260 | None:intergenic | 45.0% | |
| GAAGAAATTCCTTTGCCCCT+TGG | - | chr6.3:13214747-13214766 | MS.gene30201:intron | 45.0% | |
| GCAAAAGTTGCAGGATGAGA+TGG | - | chr6.3:13216126-13216145 | MS.gene30201:intron | 45.0% | |
| GGTACTGTTGTGATAGCTGA+TGG | - | chr6.3:13214663-13214682 | MS.gene30201:CDS | 45.0% | |
| GGTGTGACACATGCTATTAC+AGG | - | chr6.3:13216647-13216666 | MS.gene30201:intron | 45.0% | |
| GTCAGCAATGCTTACCAAGA+AGG | - | chr6.3:13214052-13214071 | MS.gene30201:CDS | 45.0% | |
| GTGTCAGTGCTTCATAGCAT+AGG | + | chr6.3:13212240-13212259 | None:intergenic | 45.0% | |
| TCATCCTTAACTGCTGGCAA+TGG | - | chr6.3:13215580-13215599 | MS.gene30201:intron | 45.0% | |
| TCCTCGGATTAAGCATGTCA+TGG | + | chr6.3:13212175-13212194 | None:intergenic | 45.0% | |
| TGGAATGATTCCTGGTCAGA+TGG | - | chr6.3:13214569-13214588 | MS.gene30201:intron | 45.0% | |
| TGGTAACCAATCTCTCCTAG+AGG | + | chr6.3:13217324-13217343 | None:intergenic | 45.0% | |
| TGTGAAGCATAGAGACTCCT+CGG | + | chr6.3:13212191-13212210 | None:intergenic | 45.0% | |
| TGTTGATGTCAAGTCGGTGT+TGG | - | chr6.3:13212301-13212320 | MS.gene30201:intron | 45.0% | |
| TGTTTATGGAGCTGAGCAGA+AGG | - | chr6.3:13217277-13217296 | MS.gene30201:CDS | 45.0% | |
| TTCTCACTGCATCACAGCAT+TGG | + | chr6.3:13217033-13217052 | None:intergenic | 45.0% | |
| TTTGGTCATCTCAGTGCCAA+GGG | + | chr6.3:13214766-13214785 | None:intergenic | 45.0% | |
| ! | ATCTAAGGTCGCTGAAGCTA+AGG | - | chr6.3:13215987-13216006 | MS.gene30201:intron | 45.0% |
| ! | CATTCGCTTGGTTGATGTCA+TGG | - | chr6.3:13216731-13216750 | MS.gene30201:intron | 45.0% |
| ! | GAGATGTGGTGATTTCTGGA+GGG | - | chr6.3:13213363-13213382 | MS.gene30201:CDS | 45.0% |
| ! | GATTTGGAACTCAACCACCA+AGG | + | chr6.3:13215403-13215422 | None:intergenic | 45.0% |
| ! | TGAGATGTGGTGATTTCTGG+AGG | - | chr6.3:13213362-13213381 | MS.gene30201:CDS | 45.0% |
| ! | TTTTGGTCATCTCAGTGCCA+AGG | + | chr6.3:13214767-13214786 | None:intergenic | 45.0% |
| !! | ACCTGTTCAAGAGGCATTTG+TGG | + | chr6.3:13213656-13213675 | None:intergenic | 45.0% |
| !! | AGCTTGTAGTGGATCTATCG+TGG | - | chr6.3:13214316-13214335 | MS.gene30201:CDS | 45.0% |
| !! | GCTTGTAGTGGATCTATCGT+GGG | - | chr6.3:13214317-13214336 | MS.gene30201:CDS | 45.0% |
| ACACAACACATGTCGGACAC+TGG | + | chr6.3:13211825-13211844 | None:intergenic | 50.0% | |
| ACGTGGACAAAATGCCTTGG+TGG | - | chr6.3:13215386-13215405 | MS.gene30201:intron | 50.0% | |
| AGTCGTCGTAACAACTCACG+CGG | - | chr6.3:13211449-13211468 | MS.gene30201:CDS | 50.0% | |
| ATATGGGGAAAAGGCGGAAG+AGG | - | chr6.3:13213799-13213818 | MS.gene30201:intron | 50.0% | |
| ATCACCATCGGAAACTCCGT+TGG | + | chr6.3:13214499-13214518 | None:intergenic | 50.0% | |
| CACAACACATGTCGGACACT+GGG | + | chr6.3:13211824-13211843 | None:intergenic | 50.0% | |
| CATCTTCGGGTGCAAACTCA+AGG | + | chr6.3:13214797-13214816 | None:intergenic | 50.0% | |
| CCTTTATTGAGCCAATCCGC+CGG | + | chr6.3:13215673-13215692 | None:intergenic | 50.0% | |
| CTTTCCAACGGAGTTTCCGA+TGG | - | chr6.3:13214492-13214511 | MS.gene30201:intron | 50.0% | |
| GAGTTTGCACCCGAAGATGT+TGG | - | chr6.3:13214798-13214817 | MS.gene30201:intron | 50.0% | |
| GCCACAAATGCCTCTTGAAC+AGG | - | chr6.3:13213652-13213671 | MS.gene30201:intron | 50.0% | |
| GGGAACCAAACCTGTTCAAG+AGG | + | chr6.3:13213665-13213684 | None:intergenic | 50.0% | |
| GGTCGCTGAAGCTAAGGAAA+AGG | - | chr6.3:13215993-13216012 | MS.gene30201:intron | 50.0% | |
| TCACGCGGTGTTCGTGTTAT+CGG | - | chr6.3:13211464-13211483 | MS.gene30201:CDS | 50.0% | |
| TCTATCGTGGGAACCTGAGA+AGG | - | chr6.3:13214329-13214348 | MS.gene30201:CDS | 50.0% | |
| TGGCAGAACCTGATGACACA+AGG | + | chr6.3:13213636-13213655 | None:intergenic | 50.0% | |
| TGGTCAGATGGATGCTCCTA+AGG | - | chr6.3:13214581-13214600 | MS.gene30201:intron | 50.0% | |
| TGTCAGTGTCGTGTTTGTGC+CGG | - | chr6.3:13211913-13211932 | MS.gene30201:intron | 50.0% | |
| TTGGTCATCTCAGTGCCAAG+GGG | + | chr6.3:13214765-13214784 | None:intergenic | 50.0% | |
| ! | AGGGAGCACATTTCGAACAC+TGG | - | chr6.3:13213382-13213401 | MS.gene30201:CDS | 50.0% |
| !! | TTAGGAGCATCCATCTGACC+AGG | + | chr6.3:13214582-13214601 | None:intergenic | 50.0% |
| ACACAAGGCTTCCCACCTCT+TGG | + | chr6.3:13213621-13213640 | None:intergenic | 55.0% | |
| ATCTCAGTGCCAAGGGGCAA+AGG | + | chr6.3:13214759-13214778 | None:intergenic | 55.0% | |
| GCGACGTGGACAAAATGCCT+TGG | - | chr6.3:13215383-13215402 | MS.gene30201:intron | 55.0% | |
| TGGAGCTGAGCAGAAGGATG+AGG | - | chr6.3:13217283-13217302 | MS.gene30201:CDS | 55.0% | |
| ! | GTGGGAAGCCTTGTGTCATC+AGG | - | chr6.3:13213625-13213644 | MS.gene30201:intron | 55.0% |
| ! | GTTCATTCGGCCAAGGCATC+TGG | - | chr6.3:13214017-13214036 | MS.gene30201:CDS | 55.0% |
| !! | CCGGCGGATTGGCTCAATAA+AGG | - | chr6.3:13215670-13215689 | MS.gene30201:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 13211365 | 13217361 | 13211365 | ID=MS.gene30201 |
| chr6.3 | mRNA | 13211365 | 13217361 | 13211365 | ID=MS.gene30201.t1;Parent=MS.gene30201 |
| chr6.3 | exon | 13217197 | 13217361 | 13217197 | ID=MS.gene30201.t1.exon1;Parent=MS.gene30201.t1 |
| chr6.3 | CDS | 13217197 | 13217361 | 13217197 | ID=cds.MS.gene30201.t1;Parent=MS.gene30201.t1 |
| chr6.3 | exon | 13215053 | 13215150 | 13215053 | ID=MS.gene30201.t1.exon2;Parent=MS.gene30201.t1 |
| chr6.3 | CDS | 13215053 | 13215150 | 13215053 | ID=cds.MS.gene30201.t1;Parent=MS.gene30201.t1 |
| chr6.3 | exon | 13214841 | 13214927 | 13214841 | ID=MS.gene30201.t1.exon3;Parent=MS.gene30201.t1 |
| chr6.3 | CDS | 13214841 | 13214927 | 13214841 | ID=cds.MS.gene30201.t1;Parent=MS.gene30201.t1 |
| chr6.3 | exon | 13214587 | 13214743 | 13214587 | ID=MS.gene30201.t1.exon4;Parent=MS.gene30201.t1 |
| chr6.3 | CDS | 13214587 | 13214743 | 13214587 | ID=cds.MS.gene30201.t1;Parent=MS.gene30201.t1 |
| chr6.3 | exon | 13213863 | 13214411 | 13213863 | ID=MS.gene30201.t1.exon5;Parent=MS.gene30201.t1 |
| chr6.3 | CDS | 13213863 | 13214411 | 13213863 | ID=cds.MS.gene30201.t1;Parent=MS.gene30201.t1 |
| chr6.3 | exon | 13213266 | 13213408 | 13213266 | ID=MS.gene30201.t1.exon6;Parent=MS.gene30201.t1 |
| chr6.3 | CDS | 13213266 | 13213408 | 13213266 | ID=cds.MS.gene30201.t1;Parent=MS.gene30201.t1 |
| chr6.3 | exon | 13212953 | 13213150 | 13212953 | ID=MS.gene30201.t1.exon7;Parent=MS.gene30201.t1 |
| chr6.3 | CDS | 13212953 | 13213150 | 13212953 | ID=cds.MS.gene30201.t1;Parent=MS.gene30201.t1 |
| chr6.3 | exon | 13212712 | 13212802 | 13212712 | ID=MS.gene30201.t1.exon8;Parent=MS.gene30201.t1 |
| chr6.3 | CDS | 13212712 | 13212802 | 13212712 | ID=cds.MS.gene30201.t1;Parent=MS.gene30201.t1 |
| chr6.3 | exon | 13212449 | 13212614 | 13212449 | ID=MS.gene30201.t1.exon9;Parent=MS.gene30201.t1 |
| chr6.3 | CDS | 13212449 | 13212614 | 13212449 | ID=cds.MS.gene30201.t1;Parent=MS.gene30201.t1 |
| chr6.3 | exon | 13211590 | 13211700 | 13211590 | ID=MS.gene30201.t1.exon10;Parent=MS.gene30201.t1 |
| chr6.3 | CDS | 13211590 | 13211700 | 13211590 | ID=cds.MS.gene30201.t1;Parent=MS.gene30201.t1 |
| chr6.3 | exon | 13211365 | 13211498 | 13211365 | ID=MS.gene30201.t1.exon11;Parent=MS.gene30201.t1 |
| chr6.3 | CDS | 13211365 | 13211498 | 13211365 | ID=cds.MS.gene30201.t1;Parent=MS.gene30201.t1 |
| Gene Sequence |
| Protein sequence |
