Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060283.t1 | XP_013469996.1 | 91.9 | 719 | 54 | 3 | 1 | 719 | 1 | 715 | 9.80E-304 | 1052.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060283.t1 | A0A072VPU0 | 91.9 | 719 | 54 | 3 | 1 | 719 | 1 | 715 | 7.0e-304 | 1052.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060283 | MS.gene064161 | 0.808301 | 3.31E-50 | -1.69E-46 |
| MS.gene060283 | MS.gene064622 | 0.809539 | 1.80E-50 | -1.69E-46 |
| MS.gene060283 | MS.gene066010 | 0.80705 | 6.11E-50 | -1.69E-46 |
| MS.gene060283 | MS.gene066877 | 0.816302 | 5.93E-52 | -1.69E-46 |
| MS.gene060283 | MS.gene24699 | 0.804083 | 2.56E-49 | -1.69E-46 |
| MS.gene060283 | MS.gene26801 | 0.825988 | 3.47E-54 | -1.69E-46 |
| MS.gene060283 | MS.gene30201 | 0.811382 | 7.20E-51 | -1.69E-46 |
| MS.gene060283 | MS.gene52975 | 0.800027 | 1.75E-48 | -1.69E-46 |
| MS.gene060283 | MS.gene52996 | 0.819174 | 1.33E-52 | -1.69E-46 |
| MS.gene060283 | MS.gene66156 | 0.819085 | 1.40E-52 | -1.69E-46 |
| MS.gene060283 | MS.gene66159 | 0.818404 | 2.00E-52 | -1.69E-46 |
| MS.gene060283 | MS.gene68611 | 0.809168 | 2.16E-50 | -1.69E-46 |
| MS.gene060283 | MS.gene70898 | 0.811792 | 5.86E-51 | -1.69E-46 |
| MS.gene060283 | MS.gene90636 | 0.804602 | 2.00E-49 | -1.69E-46 |
| MS.gene060283 | MS.gene92578 | 0.804783 | 1.83E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060283.t1 | MTR_1g106795 | 95.410 | 719 | 29 | 3 | 1 | 719 | 1 | 715 | 0.0 | 1379 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060283.t1 | AT1G49870 | 44.103 | 814 | 303 | 23 | 28 | 711 | 32 | 823 | 4.23e-173 | 517 |
| MS.gene060283.t1 | AT1G49870 | 44.081 | 794 | 297 | 22 | 48 | 711 | 9 | 785 | 5.53e-171 | 510 |
Find 157 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATTGGCTGTTCTCTTTC+TGG | -0.029662 | 1.2:+79575634 | None:intergenic |
| CGGACTTGAGTTCACTCTTT+TGG | 0.163007 | 1.2:+79576320 | None:intergenic |
| TCTATTTGACAATGCTTCTT+TGG | 0.229577 | 1.2:+79576604 | None:intergenic |
| TGATGGGTTGGAGAAGATTT+TGG | 0.232028 | 1.2:-79575525 | MS.gene060283:CDS |
| AGCAGAAGCTCAACTATTAA+AGG | 0.244271 | 1.2:-79576701 | MS.gene060283:CDS |
| ATAGAGACACCCTCTATTAA+TGG | 0.259371 | 1.2:-79576586 | MS.gene060283:CDS |
| ACCTGATTTGGGAAGTATTC+TGG | 0.265806 | 1.2:-79575837 | MS.gene060283:CDS |
| ATCGGAGTGCATACCTGATT+TGG | 0.296691 | 1.2:-79575849 | MS.gene060283:CDS |
| GCAACTATAGTTGCAACTTA+TGG | 0.305864 | 1.2:-79576154 | MS.gene060283:CDS |
| TTGCGCGGAAACCAGTTAAT+AGG | 0.308760 | 1.2:+79577206 | None:intergenic |
| AATGATAATGAAACAAAATT+AGG | 0.316246 | 1.2:-79575908 | MS.gene060283:CDS |
| AATAAATTGACGAAGGAATT+AGG | 0.317425 | 1.2:-79577299 | MS.gene060283:CDS |
| GTAAAACTTCTCCTATTAAC+TGG | 0.318045 | 1.2:-79577217 | MS.gene060283:CDS |
| TGAGAGTTTGGATAAAGTTT+TGG | 0.321510 | 1.2:-79575390 | MS.gene060283:CDS |
| TAGGGTTACCTTTCCGATCT+TGG | 0.327646 | 1.2:+79577666 | None:intergenic |
| TGATGACTTTCATCTGTATC+AGG | 0.330426 | 1.2:+79576400 | None:intergenic |
| AAGAGTATTGAGGGAGAAAA+TGG | 0.331424 | 1.2:-79576986 | MS.gene060283:CDS |
| GAGGAAAATTAAGATGCTTC+AGG | 0.332559 | 1.2:-79577162 | MS.gene060283:intron |
| GTCTTTCATTCTAGGCTGCC+TGG | 0.353720 | 1.2:-79574918 | MS.gene060283:intron |
| CTTGGAGACACCAGGCTTCA+TGG | 0.355841 | 1.2:+79575091 | None:intergenic |
| CTTGCTGGAAAATTAATTGC+TGG | 0.359085 | 1.2:+79576085 | None:intergenic |
| TCTCATATTCAGGAAGTAGA+TGG | 0.359391 | 1.2:-79577060 | MS.gene060283:intron |
| TCTCTTTCCAATCTGTGTAC+TGG | 0.361707 | 1.2:+79575497 | None:intergenic |
| AGAAGGAGAAAATGAAGTTC+GGG | 0.361814 | 1.2:-79575346 | MS.gene060283:CDS |
| ACCTCGCGGCGCGTAAAATT+CGG | 0.362205 | 1.2:+79576896 | None:intergenic |
| AATGACGACATTCTTCTTGC+TGG | 0.390183 | 1.2:+79576070 | None:intergenic |
| TGGTGGTCTGGACCAAGTTT+TGG | 0.394084 | 1.2:-79575258 | MS.gene060283:CDS |
| ATTGGAAAGAGAGAAGTTAC+AGG | 0.401255 | 1.2:-79575486 | MS.gene060283:CDS |
| AAAAGTTATCGTCACAAATC+AGG | 0.404328 | 1.2:-79577253 | MS.gene060283:CDS |
| ACAATGCTTCTTTGGACAAT+CGG | 0.405172 | 1.2:+79576612 | None:intergenic |
| AGCAAGAAGAATGTCGTCAT+TGG | 0.406742 | 1.2:-79576068 | MS.gene060283:CDS |
| TGGAAAATTAATTGCTGGAT+TGG | 0.407077 | 1.2:+79576090 | None:intergenic |
| AACCTTGTCTTGTTCAAGCT+TGG | 0.407936 | 1.2:+79575073 | None:intergenic |
| GAGGTAGGAGAACGAGGAAG+AGG | 0.408997 | 1.2:+79577700 | None:intergenic |
| TTGTCTCCAAACGGTTGTTT+CGG | 0.409432 | 1.2:+79575294 | None:intergenic |
| AATTCATCTTTACTAAATGA+AGG | 0.411210 | 1.2:+79576454 | None:intergenic |
| GATTCCAAGATATCATTTCC+AGG | 0.413402 | 1.2:-79576289 | MS.gene060283:CDS |
| CTCACAATCCGCCACATTAG+TGG | 0.415788 | 1.2:+79575409 | None:intergenic |
| ACCAGAATACTTCCCAAATC+AGG | 0.421631 | 1.2:+79575836 | None:intergenic |
| GGAAAATTAATTGCTGGATT+GGG | 0.421777 | 1.2:+79576091 | None:intergenic |
| TTGTTTCATTATCATTCCTA+TGG | 0.423963 | 1.2:+79575915 | None:intergenic |
| AATCCCTGGAAATGATATCT+TGG | 0.433501 | 1.2:+79576285 | None:intergenic |
| TGTGGCGGATTGTGAGAGTT+TGG | 0.433589 | 1.2:-79575402 | MS.gene060283:CDS |
| TTATGGTTTAAATGCTGCAT+TGG | 0.435226 | 1.2:-79576137 | MS.gene060283:CDS |
| CTGCTTTGGTGGAGGCATCT+TGG | 0.435917 | 1.2:-79576921 | MS.gene060283:CDS |
| GGTAAAGCCAGTACACAGAT+TGG | 0.437713 | 1.2:-79575504 | MS.gene060283:CDS |
| TGAAGAAGGTGGTGGTGGTC+TGG | 0.438089 | 1.2:-79575270 | MS.gene060283:CDS |
| AATGAAGTTCGGGGATGAAT+GGG | 0.438179 | 1.2:-79575336 | MS.gene060283:CDS |
| TCGGAGTGCATACCTGATTT+GGG | 0.438474 | 1.2:-79575848 | MS.gene060283:CDS |
| ATGATAGAGGAAAACATTGA+TGG | 0.441913 | 1.2:-79575542 | MS.gene060283:CDS |
| AGAGAGAGTTGGAAGAAGCC+TGG | 0.442819 | 1.2:-79575136 | MS.gene060283:CDS |
| CAATGCTTCTTTGGACAATC+GGG | 0.443605 | 1.2:+79576613 | None:intergenic |
| TGAAGGGCGTGTTGCAAGCT+TGG | 0.443827 | 1.2:+79576471 | None:intergenic |
| CTTCTTCATTTGTCTCCAAA+CGG | 0.447190 | 1.2:+79575285 | None:intergenic |
| CGAAGATGAACTTTCTTCAC+TGG | 0.450063 | 1.2:-79576176 | MS.gene060283:CDS |
| AAGTGCAACTGAAGCTTTCG+AGG | 0.450166 | 1.2:-79576671 | MS.gene060283:CDS |
| GAGAGAGTTGGAAGAAGCCT+GGG | 0.453084 | 1.2:-79575135 | MS.gene060283:CDS |
| AAATGAAGTTCGGGGATGAA+TGG | 0.455357 | 1.2:-79575337 | MS.gene060283:CDS |
| GGAGGCTCGAAGAACTGCTT+TGG | 0.458895 | 1.2:-79576935 | MS.gene060283:CDS |
| ACATGTCTCAAGACTTGAAA+AGG | 0.459009 | 1.2:-79575669 | MS.gene060283:CDS |
| GAGAAGGAGAAAATGAAGTT+CGG | 0.459404 | 1.2:-79575347 | MS.gene060283:CDS |
| TTTCGAGGCAGCTGAGGCTA+TGG | 0.459678 | 1.2:-79576656 | MS.gene060283:CDS |
| TATAAATTTGAATATGATAG+AGG | 0.460587 | 1.2:-79575555 | MS.gene060283:CDS |
| TTGACGCTTGATCAGACTCT+TGG | 0.460929 | 1.2:-79577030 | MS.gene060283:CDS |
| ACGAGGAAGAGGAGGAGAAT+CGG | 0.462914 | 1.2:+79577711 | None:intergenic |
| TGATCCTTCTCCATTAATAG+AGG | 0.474527 | 1.2:+79576576 | None:intergenic |
| CGCATTATTCAAGAGTATTG+AGG | 0.475279 | 1.2:-79576996 | MS.gene060283:CDS |
| GGCTCGAAGAACTGCTTTGG+TGG | 0.478001 | 1.2:-79576932 | MS.gene060283:CDS |
| TGAGCTTCTGCTTCATCACT+AGG | 0.478022 | 1.2:+79576712 | None:intergenic |
| TCCTAAGCTCAGTCCTCCCC+AGG | 0.483030 | 1.2:+79575118 | None:intergenic |
| AGAGGAAAACATTGATGGGT+TGG | 0.485344 | 1.2:-79575537 | MS.gene060283:CDS |
| CTCAGCTTCAGCTTTAATCC+AGG | 0.486257 | 1.2:+79574900 | None:intergenic |
| GTAGGAGAACGAGGAAGAGG+AGG | 0.488886 | 1.2:+79577703 | None:intergenic |
| TGAACTCAAGTCCGAAGACT+TGG | 0.489746 | 1.2:-79576311 | MS.gene060283:CDS |
| TAATGCTTCACCAGAAGAAA+AGG | 0.490641 | 1.2:+79575592 | None:intergenic |
| AGCTCTTGTAAATCTGTTGA+TGG | 0.490869 | 1.2:-79575878 | MS.gene060283:CDS |
| GCAAGAAGAATGTCGTCATT+GGG | 0.491869 | 1.2:-79576067 | MS.gene060283:CDS |
| AATTGCTGGATTGGGCTGCT+TGG | 0.499178 | 1.2:+79576099 | None:intergenic |
| CAAGGCAAGGGAGAGAGAGT+TGG | 0.500413 | 1.2:-79575147 | MS.gene060283:CDS |
| TATCTTGGAATCCAAGTCTT+CGG | 0.500436 | 1.2:+79576300 | None:intergenic |
| GCATTATTCAAGAGTATTGA+GGG | 0.503484 | 1.2:-79576995 | MS.gene060283:CDS |
| AAGACTTGAAAAGGAAGTTC+AGG | 0.505605 | 1.2:-79575660 | MS.gene060283:CDS |
| TGAAAGTCATCAGGACTTAA+CGG | 0.511572 | 1.2:-79576389 | MS.gene060283:CDS |
| ACTAAGACCTTGTCTAAGCC+TGG | 0.511721 | 1.2:+79575695 | None:intergenic |
| CATTTCCAGGGATTATTGAA+AGG | 0.513095 | 1.2:-79576276 | MS.gene060283:CDS |
| TGTTCAAGCTTGGAGACACC+AGG | 0.514480 | 1.2:+79575083 | None:intergenic |
| CTTTCTCGATGTTCCATCCA+AGG | 0.515891 | 1.2:+79576030 | None:intergenic |
| CTGTGGCTCGACGCAAGGCA+AGG | 0.519812 | 1.2:-79575160 | MS.gene060283:CDS |
| GGATTATTGAAAGGAAAAGT+AGG | 0.522151 | 1.2:-79576267 | MS.gene060283:CDS |
| CAGACTTGAGAGGGAAAAGA+TGG | 0.523808 | 1.2:-79575222 | MS.gene060283:CDS |
| TCAATACTCTTGAATAATGC+GGG | 0.525190 | 1.2:+79576998 | None:intergenic |
| AGCTAGAGAAGCAGCACACA+AGG | 0.526135 | 1.2:-79576962 | MS.gene060283:CDS |
| TGAAAATAGAATAAAACTTG+TGG | 0.526849 | 1.2:-79576230 | MS.gene060283:CDS |
| CTTGGATGGAACATCGAGAA+AGG | 0.529370 | 1.2:-79576029 | MS.gene060283:CDS |
| TGATACAGATGAAAGTCATC+AGG | 0.531714 | 1.2:-79576398 | MS.gene060283:CDS |
| GCCTGGGGAGGACTGAGCTT+AGG | 0.533346 | 1.2:-79575119 | MS.gene060283:CDS |
| AAGTCACCGAAACAACCGTT+TGG | 0.536970 | 1.2:-79575300 | MS.gene060283:CDS |
| GACTTCTTTGTCTACATCAA+AGG | 0.537885 | 1.2:+79576519 | None:intergenic |
| CTCATATTCAGGAAGTAGAT+GGG | 0.539202 | 1.2:-79577059 | MS.gene060283:intron |
| ATTCATCTTTACTAAATGAA+GGG | 0.540162 | 1.2:+79576455 | None:intergenic |
| TCGAAGAACTGCTTTGGTGG+AGG | 0.540303 | 1.2:-79576929 | MS.gene060283:CDS |
| TTCGAGGCAGCTGAGGCTAT+GGG | 0.544887 | 1.2:-79576655 | MS.gene060283:CDS |
| ACATAAATCCAGACTTGAGA+GGG | 0.547084 | 1.2:-79575231 | MS.gene060283:CDS |
| CTCAATACTCTTGAATAATG+CGG | 0.547525 | 1.2:+79576997 | None:intergenic |
| TTGCGAAAGTCAGCCTTGGA+TGG | 0.549215 | 1.2:-79576043 | MS.gene060283:CDS |
| TTAGGAAACTCCATGAAGCC+TGG | 0.549917 | 1.2:-79575101 | MS.gene060283:CDS |
| AGAAGCAGCACACAAGGCAA+TGG | 0.550484 | 1.2:-79576956 | MS.gene060283:CDS |
| GGGATTGCGAAAGTCAGCCT+TGG | 0.552736 | 1.2:-79576047 | MS.gene060283:CDS |
| ATCTGTTGATGGAACTCCAT+CGG | 0.553036 | 1.2:-79575867 | MS.gene060283:CDS |
| ACAAATGAAGAAGGTGGTGG+TGG | 0.556403 | 1.2:-79575275 | MS.gene060283:CDS |
| GATGACTTTCATCTGTATCA+GGG | 0.556725 | 1.2:+79576401 | None:intergenic |
| AAGAGGAGGAGAATCGGAAT+CGG | 0.556799 | 1.2:+79577717 | None:intergenic |
| TAATGAAACAAAATTAGGTA+AGG | 0.560990 | 1.2:-79575903 | MS.gene060283:CDS |
| TGTGGCTCGACGCAAGGCAA+GGG | 0.561334 | 1.2:-79575159 | MS.gene060283:CDS |
| AAGTCAGCAAAGGAAATGCT+AGG | 0.566016 | 1.2:-79575764 | MS.gene060283:CDS |
| TGATAGAGGAAAACATTGAT+GGG | 0.566252 | 1.2:-79575541 | MS.gene060283:CDS |
| ATTCCAAGATATCATTTCCA+GGG | 0.570612 | 1.2:-79576288 | MS.gene060283:CDS |
| ACACCCTCTATTAATGGAGA+AGG | 0.578628 | 1.2:-79576580 | MS.gene060283:CDS |
| TTAGGTCAATCTACATCAAG+TGG | 0.579696 | 1.2:-79577281 | MS.gene060283:CDS |
| GGAACATCGAGAAAGGATCA+TGG | 0.579814 | 1.2:-79576022 | MS.gene060283:CDS |
| TCGGTGGAGTGATTCGTTGA+CGG | 0.581185 | 1.2:+79577736 | None:intergenic |
| AAGTGGATTCCTTCTTGGAG+AGG | 0.582173 | 1.2:-79577181 | MS.gene060283:CDS |
| AAATCAGGTATGCACTCCGA+TGG | 0.585588 | 1.2:+79575851 | None:intergenic |
| TCCTCTGTCAGATCCAAGAT+CGG | 0.585811 | 1.2:-79577679 | MS.gene060283:CDS |
| CTCCAAGCTTGAACAAGACA+AGG | 0.587799 | 1.2:-79575075 | MS.gene060283:intron |
| TTAAAGCTGAAGCTGAGGAA+AGG | 0.588751 | 1.2:-79574894 | MS.gene060283:CDS |
| AGCAGCACACAAGGCAATGG+AGG | 0.589770 | 1.2:-79576953 | MS.gene060283:CDS |
| AGGAGGAGAATCGGAATCGG+TGG | 0.591234 | 1.2:+79577720 | None:intergenic |
| CGTTTGGAGACAAATGAAGA+AGG | 0.596460 | 1.2:-79575284 | MS.gene060283:CDS |
| GCGCGTATCTAGGCTAGAGA+AGG | 0.598756 | 1.2:-79575363 | MS.gene060283:CDS |
| TACAGACAAAGAAAGAGTCA+TGG | 0.609998 | 1.2:-79575434 | MS.gene060283:CDS |
| AGCAAAGATTAAGTCAGCAA+AGG | 0.612039 | 1.2:-79575774 | MS.gene060283:CDS |
| TCCGATCTTGGATCTGACAG+AGG | 0.612104 | 1.2:+79577678 | None:intergenic |
| AACATAAATCCAGACTTGAG+AGG | 0.616446 | 1.2:-79575232 | MS.gene060283:CDS |
| CTGGATTAAAGCTGAAGCTG+AGG | 0.623687 | 1.2:-79574899 | MS.gene060283:CDS |
| TGAAGCTTTCGAGGCAGCTG+AGG | 0.626348 | 1.2:-79576662 | MS.gene060283:CDS |
| TTGGATCTGACAGAGGAGGT+AGG | 0.627509 | 1.2:+79577685 | None:intergenic |
| GATCCTTCTCCATTAATAGA+GGG | 0.628940 | 1.2:+79576577 | None:intergenic |
| ACAGAGGAGGTAGGAGAACG+AGG | 0.631376 | 1.2:+79577694 | None:intergenic |
| AAAGATCACACAGAAGTACC+AGG | 0.634275 | 1.2:-79575713 | MS.gene060283:CDS |
| CATGACAAGACTTGAAAGAG+AGG | 0.639854 | 1.2:-79575957 | MS.gene060283:CDS |
| ATGAAGTTCGGGGATGAATG+GGG | 0.640238 | 1.2:-79575335 | MS.gene060283:CDS |
| GAGTCATGGAGCCACTAATG+TGG | 0.641853 | 1.2:-79575420 | MS.gene060283:CDS |
| GAGACAAATGAAGAAGGTGG+TGG | 0.652713 | 1.2:-79575278 | MS.gene060283:CDS |
| TGAGGAAAGGAATCAAGCAA+CGG | 0.654950 | 1.2:-79574881 | MS.gene060283:CDS |
| GAAGGAGAAAATGAAGTTCG+GGG | 0.658054 | 1.2:-79575345 | MS.gene060283:CDS |
| TCATGGAGCCACTAATGTGG+CGG | 0.660737 | 1.2:-79575417 | MS.gene060283:CDS |
| GCATCAAGTGGCATGCCTAG+AGG | 0.661243 | 1.2:-79575740 | MS.gene060283:CDS |
| GAGTTGGAAGAAGCCTGGGG+AGG | 0.665105 | 1.2:-79575131 | MS.gene060283:CDS |
| TTGGAGACAAATGAAGAAGG+TGG | 0.672134 | 1.2:-79575281 | MS.gene060283:CDS |
| AGAGAGTTGGAAGAAGCCTG+GGG | 0.672942 | 1.2:-79575134 | MS.gene060283:CDS |
| TGTCAGATCCAAGATCGGAA+AGG | 0.677182 | 1.2:-79577674 | MS.gene060283:intron |
| TGTGCAGAATAAATTGACGA+AGG | 0.678945 | 1.2:-79577306 | MS.gene060283:intron |
| AGAAGTACCAGGCTTAGACA+AGG | 0.689413 | 1.2:-79575702 | MS.gene060283:CDS |
| GATCTTGGATCTGACAGAGG+AGG | 0.695341 | 1.2:+79577681 | None:intergenic |
| GAAATGCTAGGAGCATCAAG+TGG | 0.709128 | 1.2:-79575752 | MS.gene060283:CDS |
| TTGTGGATATGATGATTGAG+CGG | 0.720856 | 1.2:-79576213 | MS.gene060283:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCATAAAATTGATATTTA+AGG | + | chr1.2:79575003-79575022 | None:intergenic | 10.0% |
| !! | TTATATTTATAAAGCTAAAT+TGG | - | chr1.2:79575205-79575224 | MS.gene060283:CDS | 10.0% |
| !!! | AAAAAGAAAAAACTTTAAAA+TGG | + | chr1.2:79577626-79577645 | None:intergenic | 10.0% |
| !!! | AAAAGAAAAAACTTTAAAAT+GGG | + | chr1.2:79577625-79577644 | None:intergenic | 10.0% |
| !! | TAAAATTGATATTTAAGGAA+TGG | + | chr1.2:79574998-79575017 | None:intergenic | 15.0% |
| !! | TATAAATTTGAATATGATAG+AGG | - | chr1.2:79577075-79577094 | MS.gene060283:intron | 15.0% |
| !!! | AATGATAATGAAACAAAATT+AGG | - | chr1.2:79576722-79576741 | MS.gene060283:intron | 15.0% |
| !! | AAGCTTAATGCAAATAAAAT+AGG | - | chr1.2:79575758-79575777 | MS.gene060283:CDS | 20.0% |
| !! | AATATAACAAGTAATCTCTA+AGG | + | chr1.2:79575192-79575211 | None:intergenic | 20.0% |
| !! | AATTCATCTTTACTAAATGA+AGG | + | chr1.2:79576179-79576198 | None:intergenic | 20.0% |
| !! | AATTGAAACTCATCAATTTA+GGG | + | chr1.2:79575058-79575077 | None:intergenic | 20.0% |
| !! | ATGATTTACAATTTGAAAAC+AGG | - | chr1.2:79575813-79575832 | MS.gene060283:CDS | 20.0% |
| !! | ATTCATCTTTACTAAATGAA+GGG | + | chr1.2:79576178-79576197 | None:intergenic | 20.0% |
| !! | GCTTAACTAAAAATTTATCT+AGG | + | chr1.2:79576652-79576671 | None:intergenic | 20.0% |
| !! | TAATGAAACAAAATTAGGTA+AGG | - | chr1.2:79576727-79576746 | MS.gene060283:intron | 20.0% |
| !! | TGAAAATAGAATAAAACTTG+TGG | - | chr1.2:79576400-79576419 | MS.gene060283:CDS | 20.0% |
| !!! | ATTTATGTTTTACCAAAACT+TGG | + | chr1.2:79577387-79577406 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTTTTTGCTTTTC+TGG | - | chr1.2:79577636-79577655 | MS.gene060283:intron | 20.0% |
| ! | AATAAATTGACGAAGGAATT+AGG | - | chr1.2:79575331-79575350 | MS.gene060283:CDS | 25.0% |
| ! | AATTGATATTTAAGGAATGG+TGG | + | chr1.2:79574995-79575014 | None:intergenic | 25.0% |
| ! | ACTAAAAATTTATCTAGGCT+TGG | + | chr1.2:79576647-79576666 | None:intergenic | 25.0% |
| ! | CAATTGAAACTCATCAATTT+AGG | + | chr1.2:79575059-79575078 | None:intergenic | 25.0% |
| ! | GAAAACACCAATAAAATTGT+TGG | + | chr1.2:79575892-79575911 | None:intergenic | 25.0% |
| ! | TTAATGCAAATAAAATAGGC+TGG | - | chr1.2:79575762-79575781 | MS.gene060283:CDS | 25.0% |
| ! | TTGTTTCATTATCATTCCTA+TGG | + | chr1.2:79576718-79576737 | None:intergenic | 25.0% |
| ! | TTTGTCACATAACATTCAAT+TGG | + | chr1.2:79575842-79575861 | None:intergenic | 25.0% |
| !! | AGTTAATAGGAGAAGTTTTA+CGG | + | chr1.2:79575414-79575433 | None:intergenic | 25.0% |
| !! | CTGAAAACCAACAATTTTAT+TGG | - | chr1.2:79575882-79575901 | MS.gene060283:CDS | 25.0% |
| !! | TTTCAAACTTTTGTTCTCAT+TGG | + | chr1.2:79577014-79577033 | None:intergenic | 25.0% |
| !!! | ACAATTTTATTGGTGTTTTC+AGG | - | chr1.2:79575892-79575911 | MS.gene060283:CDS | 25.0% |
| !!! | ATCAATTTAGGGTTTTGAAT+CGG | + | chr1.2:79575047-79575066 | None:intergenic | 25.0% |
| AAAAGTTATCGTCACAAATC+AGG | - | chr1.2:79575377-79575396 | MS.gene060283:CDS | 30.0% | |
| AACAAACTATGATCCATATC+TGG | + | chr1.2:79575092-79575111 | None:intergenic | 30.0% | |
| ATGATAGAGGAAAACATTGA+TGG | - | chr1.2:79577088-79577107 | MS.gene060283:intron | 30.0% | |
| ATTCCAAGATATCATTTCCA+GGG | - | chr1.2:79576342-79576361 | MS.gene060283:CDS | 30.0% | |
| CTCAATACTCTTGAATAATG+CGG | + | chr1.2:79575636-79575655 | None:intergenic | 30.0% | |
| GATATACGTTTCTCATATTC+AGG | - | chr1.2:79575560-79575579 | MS.gene060283:CDS | 30.0% | |
| GGAAAATTAATTGCTGGATT+GGG | + | chr1.2:79576542-79576561 | None:intergenic | 30.0% | |
| GGATTATTGAAAGGAAAAGT+AGG | - | chr1.2:79576363-79576382 | MS.gene060283:CDS | 30.0% | |
| GTAAAACTTCTCCTATTAAC+TGG | - | chr1.2:79575413-79575432 | MS.gene060283:CDS | 30.0% | |
| TCAATACTCTTGAATAATGC+GGG | + | chr1.2:79575635-79575654 | None:intergenic | 30.0% | |
| TCTATTTGACAATGCTTCTT+TGG | + | chr1.2:79576029-79576048 | None:intergenic | 30.0% | |
| TGATAGAGGAAAACATTGAT+GGG | - | chr1.2:79577089-79577108 | MS.gene060283:intron | 30.0% | |
| TGGAAAATTAATTGCTGGAT+TGG | + | chr1.2:79576543-79576562 | None:intergenic | 30.0% | |
| TTATGGTTTAAATGCTGCAT+TGG | - | chr1.2:79576493-79576512 | MS.gene060283:CDS | 30.0% | |
| ! | AAATTAAGATGCTTCAGGTT+TGG | - | chr1.2:79575473-79575492 | MS.gene060283:CDS | 30.0% |
| ! | ATATTTAAGGAATGGTGGAA+TGG | + | chr1.2:79574990-79575009 | None:intergenic | 30.0% |
| ! | ATCATTCCTATGGTTTTTCT+TGG | + | chr1.2:79576708-79576727 | None:intergenic | 30.0% |
| ! | TGAGAGTTTGGATAAAGTTT+TGG | - | chr1.2:79577240-79577259 | MS.gene060283:CDS | 30.0% |
| ! | TTGATAGTTTAGGGACTAAA+TGG | - | chr1.2:79575235-79575254 | MS.gene060283:CDS | 30.0% |
| !! | AAGTTACAGGTTTTATCACA+GGG | - | chr1.2:79577157-79577176 | MS.gene060283:intron | 30.0% |
| !! | GCATTATTCAAGAGTATTGA+GGG | - | chr1.2:79575635-79575654 | MS.gene060283:CDS | 30.0% |
| !! | TTTAGTGTTGTTTGACACTT+TGG | - | chr1.2:79577582-79577601 | MS.gene060283:intron | 30.0% |
| !!! | TAATCCAGTTAGTTTTTCTG+TGG | - | chr1.2:79577453-79577472 | MS.gene060283:intron | 30.0% |
| AACATAAATCCAGACTTGAG+AGG | - | chr1.2:79577398-79577417 | MS.gene060283:intron | 35.0% | |
| AAGACTTGAAAAGGAAGTTC+AGG | - | chr1.2:79576970-79576989 | MS.gene060283:CDS | 35.0% | |
| AATCCCTGGAAATGATATCT+TGG | + | chr1.2:79576348-79576367 | None:intergenic | 35.0% | |
| ACAATGCTTCTTTGGACAAT+CGG | + | chr1.2:79576021-79576040 | None:intergenic | 35.0% | |
| ACATAAATCCAGACTTGAGA+GGG | - | chr1.2:79577399-79577418 | MS.gene060283:intron | 35.0% | |
| ACATGTCTCAAGACTTGAAA+AGG | - | chr1.2:79576961-79576980 | MS.gene060283:CDS | 35.0% | |
| AGAAGGAGAAAATGAAGTTC+GGG | - | chr1.2:79577284-79577303 | MS.gene060283:CDS | 35.0% | |
| AGCAAAGATTAAGTCAGCAA+AGG | - | chr1.2:79576856-79576875 | MS.gene060283:intron | 35.0% | |
| AGCAGAAGCTCAACTATTAA+AGG | - | chr1.2:79575929-79575948 | MS.gene060283:CDS | 35.0% | |
| AGCTCTTGTAAATCTGTTGA+TGG | - | chr1.2:79576752-79576771 | MS.gene060283:intron | 35.0% | |
| ATAGAGACACCCTCTATTAA+TGG | - | chr1.2:79576044-79576063 | MS.gene060283:CDS | 35.0% | |
| ATTGGAAAGAGAGAAGTTAC+AGG | - | chr1.2:79577144-79577163 | MS.gene060283:intron | 35.0% | |
| CATTTCCAGGGATTATTGAA+AGG | - | chr1.2:79576354-79576373 | MS.gene060283:CDS | 35.0% | |
| CTAGAATGAAAGACAAAGAC+AGG | + | chr1.2:79577706-79577725 | None:intergenic | 35.0% | |
| CTCATATTCAGGAAGTAGAT+GGG | - | chr1.2:79575571-79575590 | MS.gene060283:CDS | 35.0% | |
| CTGTCTTTGTCTTTCATTCT+AGG | - | chr1.2:79577704-79577723 | MS.gene060283:CDS | 35.0% | |
| CTTCTTCATTTGTCTCCAAA+CGG | + | chr1.2:79577348-79577367 | None:intergenic | 35.0% | |
| CTTGCTGGAAAATTAATTGC+TGG | + | chr1.2:79576548-79576567 | None:intergenic | 35.0% | |
| GACTTCTTTGTCTACATCAA+AGG | + | chr1.2:79576114-79576133 | None:intergenic | 35.0% | |
| GAGAAGGAGAAAATGAAGTT+CGG | - | chr1.2:79577283-79577302 | MS.gene060283:CDS | 35.0% | |
| GAGGAAAATTAAGATGCTTC+AGG | - | chr1.2:79575468-79575487 | MS.gene060283:CDS | 35.0% | |
| GATCCTTCTCCATTAATAGA+GGG | + | chr1.2:79576056-79576075 | None:intergenic | 35.0% | |
| GATGACTTTCATCTGTATCA+GGG | + | chr1.2:79576232-79576251 | None:intergenic | 35.0% | |
| GATTCCAAGATATCATTTCC+AGG | - | chr1.2:79576341-79576360 | MS.gene060283:CDS | 35.0% | |
| GCAACTATAGTTGCAACTTA+TGG | - | chr1.2:79576476-79576495 | MS.gene060283:CDS | 35.0% | |
| TAATGCTTCACCAGAAGAAA+AGG | + | chr1.2:79577041-79577060 | None:intergenic | 35.0% | |
| TACAGACAAAGAAAGAGTCA+TGG | - | chr1.2:79577196-79577215 | MS.gene060283:CDS | 35.0% | |
| TAGTTTAGGGACTAAATGGA+TGG | - | chr1.2:79575239-79575258 | MS.gene060283:CDS | 35.0% | |
| TATCTTGGAATCCAAGTCTT+CGG | + | chr1.2:79576333-79576352 | None:intergenic | 35.0% | |
| TCTCATATTCAGGAAGTAGA+TGG | - | chr1.2:79575570-79575589 | MS.gene060283:CDS | 35.0% | |
| TGAAAGTCATCAGGACTTAA+CGG | - | chr1.2:79576241-79576260 | MS.gene060283:CDS | 35.0% | |
| TGATACAGATGAAAGTCATC+AGG | - | chr1.2:79576232-79576251 | MS.gene060283:CDS | 35.0% | |
| TGATCCTTCTCCATTAATAG+AGG | + | chr1.2:79576057-79576076 | None:intergenic | 35.0% | |
| TGATGACTTTCATCTGTATC+AGG | + | chr1.2:79576233-79576252 | None:intergenic | 35.0% | |
| TGTGCAGAATAAATTGACGA+AGG | - | chr1.2:79575324-79575343 | MS.gene060283:CDS | 35.0% | |
| TTAGGTCAATCTACATCAAG+TGG | - | chr1.2:79575349-79575368 | MS.gene060283:CDS | 35.0% | |
| TTGTGGATATGATGATTGAG+CGG | - | chr1.2:79576417-79576436 | MS.gene060283:CDS | 35.0% | |
| TTGTTCACTGAATCCAGATA+TGG | - | chr1.2:79575076-79575095 | MS.gene060283:CDS | 35.0% | |
| ! | CAAAAAAGTGGATTCCTTCT+TGG | - | chr1.2:79575444-79575463 | MS.gene060283:CDS | 35.0% |
| ! | CTTAATTTTCCTCTCCAAGA+AGG | + | chr1.2:79575461-79575480 | None:intergenic | 35.0% |
| ! | CTTTTCCTTTCAATAATCCC+TGG | + | chr1.2:79576362-79576381 | None:intergenic | 35.0% |
| ! | GTACTTCTGTGTGATCTTTT+TGG | + | chr1.2:79576916-79576935 | None:intergenic | 35.0% |
| ! | TTGAAATCGACCTTTTCTTC+TGG | - | chr1.2:79577028-79577047 | MS.gene060283:CDS | 35.0% |
| ! | TTTGTCTGTAGTTTTCGACT+CGG | + | chr1.2:79577186-79577205 | None:intergenic | 35.0% |
| !! | AAGAGTATTGAGGGAGAAAA+TGG | - | chr1.2:79575644-79575663 | MS.gene060283:CDS | 35.0% |
| !! | CGCATTATTCAAGAGTATTG+AGG | - | chr1.2:79575634-79575653 | MS.gene060283:CDS | 35.0% |
| !! | GAAGTTACAGGTTTTATCAC+AGG | - | chr1.2:79577156-79577175 | MS.gene060283:intron | 35.0% |
| !! | GGAGAGATGTTGATAGTTTA+GGG | - | chr1.2:79575226-79575245 | MS.gene060283:CDS | 35.0% |
| !! | TGGAGAGATGTTGATAGTTT+AGG | - | chr1.2:79575225-79575244 | MS.gene060283:CDS | 35.0% |
| AAATGAAGTTCGGGGATGAA+TGG | - | chr1.2:79577293-79577312 | MS.gene060283:CDS | 40.0% | |
| AAGTCAGCAAAGGAAATGCT+AGG | - | chr1.2:79576866-79576885 | MS.gene060283:intron | 40.0% | |
| AATGAAGTTCGGGGATGAAT+GGG | - | chr1.2:79577294-79577313 | MS.gene060283:CDS | 40.0% | |
| AATGACGACATTCTTCTTGC+TGG | + | chr1.2:79576563-79576582 | None:intergenic | 40.0% | |
| ACACCCTCTATTAATGGAGA+AGG | - | chr1.2:79576050-79576069 | MS.gene060283:CDS | 40.0% | |
| ACCAGAATACTTCCCAAATC+AGG | + | chr1.2:79576797-79576816 | None:intergenic | 40.0% | |
| AGCAAGAAGAATGTCGTCAT+TGG | - | chr1.2:79576562-79576581 | MS.gene060283:CDS | 40.0% | |
| ATAGGCTGGACATTAGTTGA+CGG | - | chr1.2:79575776-79575795 | MS.gene060283:CDS | 40.0% | |
| CAATGCTTCTTTGGACAATC+GGG | + | chr1.2:79576020-79576039 | None:intergenic | 40.0% | |
| CATGACAAGACTTGAAAGAG+AGG | - | chr1.2:79576673-79576692 | MS.gene060283:CDS | 40.0% | |
| CGAAGATGAACTTTCTTCAC+TGG | - | chr1.2:79576454-79576473 | MS.gene060283:CDS | 40.0% | |
| CGTTTGGAGACAAATGAAGA+AGG | - | chr1.2:79577346-79577365 | MS.gene060283:intron | 40.0% | |
| GAAGGAGAAAATGAAGTTCG+GGG | - | chr1.2:79577285-79577304 | MS.gene060283:CDS | 40.0% | |
| GCAAGAAGAATGTCGTCATT+GGG | - | chr1.2:79576563-79576582 | MS.gene060283:CDS | 40.0% | |
| GTGAAGCCAAGAAAAACCAT+AGG | - | chr1.2:79576699-79576718 | MS.gene060283:CDS | 40.0% | |
| TCTCTTTCCAATCTGTGTAC+TGG | + | chr1.2:79577136-79577155 | None:intergenic | 40.0% | |
| TGAGGAAAGGAATCAAGCAA+CGG | - | chr1.2:79577749-79577768 | MS.gene060283:CDS | 40.0% | |
| TTAAAGCTGAAGCTGAGGAA+AGG | - | chr1.2:79577736-79577755 | MS.gene060283:CDS | 40.0% | |
| TTGCATTAAGCTTTACCTCG+CGG | + | chr1.2:79575751-79575770 | None:intergenic | 40.0% | |
| TTGGAGACAAATGAAGAAGG+TGG | - | chr1.2:79577349-79577368 | MS.gene060283:intron | 40.0% | |
| TTGTCTCCAAACGGTTGTTT+CGG | + | chr1.2:79577339-79577358 | None:intergenic | 40.0% | |
| ! | AACCTTGTCTTGTTCAAGCT+TGG | + | chr1.2:79577560-79577579 | None:intergenic | 40.0% |
| ! | AGAGGAAAACATTGATGGGT+TGG | - | chr1.2:79577093-79577112 | MS.gene060283:intron | 40.0% |
| ! | ATCTGTTGATGGAACTCCAT+CGG | - | chr1.2:79576763-79576782 | MS.gene060283:intron | 40.0% |
| ! | GGACTTGAGTTCACTCTTTT+GGG | + | chr1.2:79576312-79576331 | None:intergenic | 40.0% |
| ! | TAAGGAATGGTGGAATGGTA+GGG | + | chr1.2:79574985-79575004 | None:intergenic | 40.0% |
| ! | TTAAGGAATGGTGGAATGGT+AGG | + | chr1.2:79574986-79575005 | None:intergenic | 40.0% |
| !! | AAAGATCACACAGAAGTACC+AGG | - | chr1.2:79576917-79576936 | MS.gene060283:CDS | 40.0% |
| !! | ACCTGATTTGGGAAGTATTC+TGG | - | chr1.2:79576793-79576812 | MS.gene060283:intron | 40.0% |
| !! | TTTTGGTTAAGCGCGTATCT+AGG | - | chr1.2:79577257-79577276 | MS.gene060283:CDS | 40.0% |
| !!! | AAGGAATCCACTTTTTTGCG+CGG | + | chr1.2:79575442-79575461 | None:intergenic | 40.0% |
| !!! | GGGTTTTGAATCGGTAAACA+AGG | + | chr1.2:79575038-79575057 | None:intergenic | 40.0% |
| !!! | TGATGGGTTGGAGAAGATTT+TGG | - | chr1.2:79577105-79577124 | MS.gene060283:intron | 40.0% |
| AAATCAGGTATGCACTCCGA+TGG | + | chr1.2:79576782-79576801 | None:intergenic | 45.0% | |
| AAGAGGAGGAGAATCGGAAT+CGG | + | chr1.2:79574916-79574935 | None:intergenic | 45.0% | |
| AAGTCACCGAAACAACCGTT+TGG | - | chr1.2:79577330-79577349 | MS.gene060283:intron | 45.0% | |
| AAGTGCAACTGAAGCTTTCG+AGG | - | chr1.2:79575959-79575978 | MS.gene060283:CDS | 45.0% | |
| ACTAAGACCTTGTCTAAGCC+TGG | + | chr1.2:79576938-79576957 | None:intergenic | 45.0% | |
| ATCGGAGTGCATACCTGATT+TGG | - | chr1.2:79576781-79576800 | MS.gene060283:intron | 45.0% | |
| ATGAAGTTCGGGGATGAATG+GGG | - | chr1.2:79577295-79577314 | MS.gene060283:CDS | 45.0% | |
| CAGACTTGAGAGGGAAAAGA+TGG | - | chr1.2:79577408-79577427 | MS.gene060283:intron | 45.0% | |
| CGAGCCACAGAAAAACTAAC+TGG | + | chr1.2:79577460-79577479 | None:intergenic | 45.0% | |
| CTCCAAGCTTGAACAAGACA+AGG | - | chr1.2:79577555-79577574 | MS.gene060283:intron | 45.0% | |
| CTGGATTAAAGCTGAAGCTG+AGG | - | chr1.2:79577731-79577750 | MS.gene060283:CDS | 45.0% | |
| CTTGGATGGAACATCGAGAA+AGG | - | chr1.2:79576601-79576620 | MS.gene060283:CDS | 45.0% | |
| CTTTCTCGATGTTCCATCCA+AGG | + | chr1.2:79576603-79576622 | None:intergenic | 45.0% | |
| GAGACAAATGAAGAAGGTGG+TGG | - | chr1.2:79577352-79577371 | MS.gene060283:intron | 45.0% | |
| GGAACATCGAGAAAGGATCA+TGG | - | chr1.2:79576608-79576627 | MS.gene060283:CDS | 45.0% | |
| GGTAAAGCCAGTACACAGAT+TGG | - | chr1.2:79577126-79577145 | MS.gene060283:intron | 45.0% | |
| TAGGGTTACCTTTCCGATCT+TGG | + | chr1.2:79574967-79574986 | None:intergenic | 45.0% | |
| TCCTCTGTCAGATCCAAGAT+CGG | - | chr1.2:79574951-79574970 | MS.gene060283:intron | 45.0% | |
| TCGGAGTGCATACCTGATTT+GGG | - | chr1.2:79576782-79576801 | MS.gene060283:intron | 45.0% | |
| TGAACTCAAGTCCGAAGACT+TGG | - | chr1.2:79576319-79576338 | MS.gene060283:CDS | 45.0% | |
| TGAGCTTCTGCTTCATCACT+AGG | + | chr1.2:79575921-79575940 | None:intergenic | 45.0% | |
| TGTCAGATCCAAGATCGGAA+AGG | - | chr1.2:79574956-79574975 | MS.gene060283:intron | 45.0% | |
| TTAGGAAACTCCATGAAGCC+TGG | - | chr1.2:79577529-79577548 | MS.gene060283:intron | 45.0% | |
| TTGACGCTTGATCAGACTCT+TGG | - | chr1.2:79575600-79575619 | MS.gene060283:CDS | 45.0% | |
| TTGCGCGGAAACCAGTTAAT+AGG | + | chr1.2:79575427-79575446 | None:intergenic | 45.0% | |
| ! | AAGTGGATTCCTTCTTGGAG+AGG | - | chr1.2:79575449-79575468 | MS.gene060283:CDS | 45.0% |
| ! | ACAAATGAAGAAGGTGGTGG+TGG | - | chr1.2:79577355-79577374 | MS.gene060283:intron | 45.0% |
| ! | ATAGGAGAAGTTTTACGGCG+TGG | + | chr1.2:79575409-79575428 | None:intergenic | 45.0% |
| ! | CATCTTTTCCCTCTCAAGTC+TGG | + | chr1.2:79577410-79577429 | None:intergenic | 45.0% |
| ! | CGGACTTGAGTTCACTCTTT+TGG | + | chr1.2:79576313-79576332 | None:intergenic | 45.0% |
| ! | CTCAGCTTCAGCTTTAATCC+AGG | + | chr1.2:79577733-79577752 | None:intergenic | 45.0% |
| ! | CTCATTGGCTGTTCTCTTTC+TGG | + | chr1.2:79576999-79577018 | None:intergenic | 45.0% |
| !! | AGAAGTACCAGGCTTAGACA+AGG | - | chr1.2:79576928-79576947 | MS.gene060283:CDS | 45.0% |
| !! | GAAATGCTAGGAGCATCAAG+TGG | - | chr1.2:79576878-79576897 | MS.gene060283:intron | 45.0% |
| !! | GTGTGATCTTTTTGGCCTCT+AGG | + | chr1.2:79576908-79576927 | None:intergenic | 45.0% |
| !!! | AGTTCACTCTTTTGGGACAC+TGG | + | chr1.2:79576305-79576324 | None:intergenic | 45.0% |
| ACGAGGAAGAGGAGGAGAAT+CGG | + | chr1.2:79574922-79574941 | None:intergenic | 50.0% | |
| AGAAGCAGCACACAAGGCAA+TGG | - | chr1.2:79575674-79575693 | MS.gene060283:CDS | 50.0% | |
| AGAGAGAGTTGGAAGAAGCC+TGG | - | chr1.2:79577494-79577513 | MS.gene060283:intron | 50.0% | |
| AGAGAGTTGGAAGAAGCCTG+GGG | - | chr1.2:79577496-79577515 | MS.gene060283:intron | 50.0% | |
| AGCTAGAGAAGCAGCACACA+AGG | - | chr1.2:79575668-79575687 | MS.gene060283:CDS | 50.0% | |
| CTCACAATCCGCCACATTAG+TGG | + | chr1.2:79577224-79577243 | None:intergenic | 50.0% | |
| CTGGTTTCCGCGCAAAAAAG+TGG | - | chr1.2:79575432-79575451 | MS.gene060283:CDS | 50.0% | |
| GAGAGAGTTGGAAGAAGCCT+GGG | - | chr1.2:79577495-79577514 | MS.gene060283:intron | 50.0% | |
| GAGTCATGGAGCCACTAATG+TGG | - | chr1.2:79577210-79577229 | MS.gene060283:CDS | 50.0% | |
| GATCTTGGATCTGACAGAGG+AGG | + | chr1.2:79574952-79574971 | None:intergenic | 50.0% | |
| GTCTTTCATTCTAGGCTGCC+TGG | - | chr1.2:79577712-79577731 | MS.gene060283:CDS | 50.0% | |
| TCATGGAGCCACTAATGTGG+CGG | - | chr1.2:79577213-79577232 | MS.gene060283:CDS | 50.0% | |
| TCCGATCTTGGATCTGACAG+AGG | + | chr1.2:79574955-79574974 | None:intergenic | 50.0% | |
| TCGAAGAACTGCTTTGGTGG+AGG | - | chr1.2:79575701-79575720 | MS.gene060283:CDS | 50.0% | |
| TCGGTGGAGTGATTCGTTGA+CGG | + | chr1.2:79574897-79574916 | None:intergenic | 50.0% | |
| TGTTCAAGCTTGGAGACACC+AGG | + | chr1.2:79577550-79577569 | None:intergenic | 50.0% | |
| TTGCGAAAGTCAGCCTTGGA+TGG | - | chr1.2:79576587-79576606 | MS.gene060283:CDS | 50.0% | |
| TTGGATCTGACAGAGGAGGT+AGG | + | chr1.2:79574948-79574967 | None:intergenic | 50.0% | |
| ! | AATTGCTGGATTGGGCTGCT+TGG | + | chr1.2:79576534-79576553 | None:intergenic | 50.0% |
| ! | TGGTGGTCTGGACCAAGTTT+TGG | - | chr1.2:79577372-79577391 | MS.gene060283:intron | 50.0% |
| ! | TTTTTCTGTGGCTCGACGCA+AGG | - | chr1.2:79577465-79577484 | MS.gene060283:intron | 50.0% |
| !! | TGTGGCGGATTGTGAGAGTT+TGG | - | chr1.2:79577228-79577247 | MS.gene060283:CDS | 50.0% |
| ACAGAGGAGGTAGGAGAACG+AGG | + | chr1.2:79574939-79574958 | None:intergenic | 55.0% | |
| ACCTCGCGGCGCGTAAAATT+CGG | + | chr1.2:79575737-79575756 | None:intergenic | 55.0% | |
| AGCAGCACACAAGGCAATGG+AGG | - | chr1.2:79575677-79575696 | MS.gene060283:CDS | 55.0% | |
| AGGAGGAGAATCGGAATCGG+TGG | + | chr1.2:79574913-79574932 | None:intergenic | 55.0% | |
| CAAGGCAAGGGAGAGAGAGT+TGG | - | chr1.2:79577483-79577502 | MS.gene060283:intron | 55.0% | |
| CTTGGAGACACCAGGCTTCA+TGG | + | chr1.2:79577542-79577561 | None:intergenic | 55.0% | |
| GAGGTAGGAGAACGAGGAAG+AGG | + | chr1.2:79574933-79574952 | None:intergenic | 55.0% | |
| GCATCAAGTGGCATGCCTAG+AGG | - | chr1.2:79576890-79576909 | MS.gene060283:intron | 55.0% | |
| GCGCGTATCTAGGCTAGAGA+AGG | - | chr1.2:79577267-79577286 | MS.gene060283:CDS | 55.0% | |
| GGAGGCTCGAAGAACTGCTT+TGG | - | chr1.2:79575695-79575714 | MS.gene060283:CDS | 55.0% | |
| GGCTCGAAGAACTGCTTTGG+TGG | - | chr1.2:79575698-79575717 | MS.gene060283:CDS | 55.0% | |
| GGGATTGCGAAAGTCAGCCT+TGG | - | chr1.2:79576583-79576602 | MS.gene060283:CDS | 55.0% | |
| GTAGGAGAACGAGGAAGAGG+AGG | + | chr1.2:79574930-79574949 | None:intergenic | 55.0% | |
| TGAAGCTTTCGAGGCAGCTG+AGG | - | chr1.2:79575968-79575987 | MS.gene060283:CDS | 55.0% | |
| TTCGAGGCAGCTGAGGCTAT+GGG | - | chr1.2:79575975-79575994 | MS.gene060283:CDS | 55.0% | |
| TTTCGAGGCAGCTGAGGCTA+TGG | - | chr1.2:79575974-79575993 | MS.gene060283:CDS | 55.0% | |
| ! | GGAGAAGTTTTACGGCGTGG+AGG | + | chr1.2:79575406-79575425 | None:intergenic | 55.0% |
| ! | TGAAGGGCGTGTTGCAAGCT+TGG | + | chr1.2:79576162-79576181 | None:intergenic | 55.0% |
| !! | CTGCTTTGGTGGAGGCATCT+TGG | - | chr1.2:79575709-79575728 | MS.gene060283:CDS | 55.0% |
| !! | TGAAGAAGGTGGTGGTGGTC+TGG | - | chr1.2:79577360-79577379 | MS.gene060283:intron | 55.0% |
| GAGTTGGAAGAAGCCTGGGG+AGG | - | chr1.2:79577499-79577518 | MS.gene060283:intron | 60.0% | |
| TCCTAAGCTCAGTCCTCCCC+AGG | + | chr1.2:79577515-79577534 | None:intergenic | 60.0% | |
| TGTGGCTCGACGCAAGGCAA+GGG | - | chr1.2:79577471-79577490 | MS.gene060283:intron | 60.0% | |
| CTGTGGCTCGACGCAAGGCA+AGG | - | chr1.2:79577470-79577489 | MS.gene060283:intron | 65.0% | |
| GCCTGGGGAGGACTGAGCTT+AGG | - | chr1.2:79577511-79577530 | MS.gene060283:intron | 65.0% | |
| ! | GCCGAATTTTACGCGCCGCG+AGG | - | chr1.2:79575733-79575752 | MS.gene060283:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 79574870 | 79577782 | 79574870 | ID=MS.gene060283 |
| chr1.2 | mRNA | 79574870 | 79577782 | 79574870 | ID=MS.gene060283.t1;Parent=MS.gene060283 |
| chr1.2 | exon | 79577675 | 79577782 | 79577675 | ID=MS.gene060283.t1.exon1;Parent=MS.gene060283.t1 |
| chr1.2 | CDS | 79577675 | 79577782 | 79577675 | ID=cds.MS.gene060283.t1;Parent=MS.gene060283.t1 |
| chr1.2 | exon | 79577163 | 79577321 | 79577163 | ID=MS.gene060283.t1.exon2;Parent=MS.gene060283.t1 |
| chr1.2 | CDS | 79577163 | 79577321 | 79577163 | ID=cds.MS.gene060283.t1;Parent=MS.gene060283.t1 |
| chr1.2 | exon | 79576898 | 79577070 | 79576898 | ID=MS.gene060283.t1.exon3;Parent=MS.gene060283.t1 |
| chr1.2 | CDS | 79576898 | 79577070 | 79576898 | ID=cds.MS.gene060283.t1;Parent=MS.gene060283.t1 |
| chr1.2 | exon | 79575076 | 79576738 | 79575076 | ID=MS.gene060283.t1.exon4;Parent=MS.gene060283.t1 |
| chr1.2 | CDS | 79575076 | 79576738 | 79575076 | ID=cds.MS.gene060283.t1;Parent=MS.gene060283.t1 |
| chr1.2 | exon | 79574870 | 79574926 | 79574870 | ID=MS.gene060283.t1.exon5;Parent=MS.gene060283.t1 |
| chr1.2 | CDS | 79574870 | 79574926 | 79574870 | ID=cds.MS.gene060283.t1;Parent=MS.gene060283.t1 |
| Gene Sequence |
| Protein sequence |
