Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30749.t1 | XP_003601137.1 | 97.1 | 595 | 13 | 2 | 1 | 593 | 1 | 593 | 0.00E+00 | 1177.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30749.t1 | Q84WU6 | 47.0 | 570 | 273 | 12 | 7 | 560 | 3 | 559 | 8.3e-132 | 472.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30749.t1 | G7J463 | 97.1 | 595 | 13 | 2 | 1 | 593 | 1 | 593 | 0.0e+00 | 1177.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene30749.t1 | TF | B3-ARF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene30749 | MS.gene68637 | PPI |
MS.gene30749 | MS.gene08701 | PPI |
MS.gene30749 | MS.gene007670 | PPI |
MS.gene31282 | MS.gene30749 | PPI |
MS.gene30749 | MS.gene08651 | PPI |
MS.gene058935 | MS.gene30749 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30749.t1 | MTR_3g073420 | 97.143 | 595 | 13 | 2 | 1 | 593 | 1 | 593 | 0.0 | 1190 |
MS.gene30749.t1 | MTR_5g061220 | 44.846 | 553 | 248 | 15 | 19 | 558 | 19 | 527 | 2.09e-144 | 428 |
MS.gene30749.t1 | MTR_2g094570 | 43.007 | 572 | 288 | 15 | 4 | 554 | 52 | 606 | 1.35e-128 | 395 |
MS.gene30749.t1 | MTR_2g094570 | 43.316 | 561 | 280 | 15 | 15 | 554 | 7 | 550 | 1.57e-128 | 392 |
MS.gene30749.t1 | MTR_2g094570 | 43.316 | 561 | 280 | 15 | 15 | 554 | 7 | 550 | 2.06e-128 | 393 |
MS.gene30749.t1 | MTR_5g040880 | 40.598 | 569 | 259 | 15 | 16 | 562 | 8 | 519 | 3.28e-126 | 381 |
MS.gene30749.t1 | MTR_2g024430 | 40.107 | 561 | 268 | 12 | 9 | 557 | 10 | 514 | 5.76e-126 | 380 |
MS.gene30749.t1 | MTR_7g101280 | 43.021 | 523 | 249 | 16 | 15 | 501 | 27 | 536 | 2.12e-124 | 381 |
MS.gene30749.t1 | MTR_0041s0110 | 43.021 | 523 | 249 | 16 | 15 | 501 | 27 | 536 | 2.12e-124 | 381 |
MS.gene30749.t1 | MTR_4g058930 | 47.875 | 447 | 215 | 10 | 16 | 448 | 9 | 451 | 2.44e-124 | 381 |
MS.gene30749.t1 | MTR_4g058930 | 47.875 | 447 | 215 | 10 | 16 | 448 | 9 | 451 | 5.67e-124 | 381 |
MS.gene30749.t1 | MTR_1g064430 | 41.596 | 589 | 285 | 19 | 16 | 573 | 24 | 584 | 8.22e-122 | 375 |
MS.gene30749.t1 | MTR_1g064430 | 41.596 | 589 | 285 | 19 | 16 | 573 | 37 | 597 | 1.19e-121 | 375 |
MS.gene30749.t1 | MTR_1g094960 | 43.524 | 471 | 200 | 13 | 16 | 448 | 16 | 458 | 5.99e-119 | 366 |
MS.gene30749.t1 | MTR_1g058210 | 37.222 | 540 | 221 | 12 | 7 | 539 | 3 | 431 | 3.92e-107 | 330 |
MS.gene30749.t1 | MTR_5g082140 | 40.305 | 459 | 218 | 9 | 10 | 460 | 3 | 413 | 1.14e-101 | 316 |
MS.gene30749.t1 | MTR_2g006270 | 35.986 | 553 | 240 | 15 | 11 | 556 | 5 | 450 | 1.28e-98 | 308 |
MS.gene30749.t1 | MTR_2g006380 | 34.964 | 552 | 230 | 19 | 16 | 556 | 17 | 450 | 1.93e-90 | 286 |
MS.gene30749.t1 | MTR_5g040740 | 43.733 | 359 | 151 | 8 | 9 | 362 | 2 | 314 | 1.52e-88 | 280 |
MS.gene30749.t1 | MTR_7g101275 | 43.314 | 344 | 151 | 7 | 29 | 367 | 2 | 306 | 1.96e-85 | 272 |
MS.gene30749.t1 | MTR_0041s0120 | 42.045 | 352 | 156 | 7 | 29 | 367 | 2 | 318 | 1.72e-82 | 265 |
MS.gene30749.t1 | MTR_5g060630 | 32.923 | 568 | 248 | 19 | 16 | 508 | 9 | 518 | 3.29e-75 | 249 |
MS.gene30749.t1 | MTR_5g460740 | 32.923 | 568 | 248 | 19 | 16 | 508 | 9 | 518 | 3.29e-75 | 249 |
MS.gene30749.t1 | MTR_5g060780 | 35.897 | 390 | 182 | 11 | 16 | 393 | 9 | 342 | 2.22e-69 | 230 |
MS.gene30749.t1 | MTR_5g061890 | 36.579 | 380 | 177 | 10 | 16 | 383 | 9 | 336 | 1.61e-68 | 228 |
MS.gene30749.t1 | MTR_5g460920 | 35.897 | 390 | 182 | 11 | 16 | 393 | 9 | 342 | 2.58e-68 | 227 |
MS.gene30749.t1 | MTR_8g079492 | 37.531 | 405 | 200 | 8 | 7 | 399 | 11 | 374 | 4.82e-68 | 238 |
MS.gene30749.t1 | MTR_2g005240 | 37.755 | 392 | 201 | 8 | 16 | 401 | 20 | 374 | 5.01e-68 | 233 |
MS.gene30749.t1 | MTR_8g079492 | 37.531 | 405 | 200 | 8 | 7 | 399 | 11 | 374 | 5.22e-68 | 238 |
MS.gene30749.t1 | MTR_2g014770 | 34.804 | 408 | 216 | 5 | 5 | 401 | 39 | 407 | 5.26e-68 | 232 |
MS.gene30749.t1 | MTR_2g014770 | 34.804 | 408 | 216 | 5 | 5 | 401 | 39 | 407 | 1.59e-67 | 232 |
MS.gene30749.t1 | MTR_2g018690 | 37.406 | 401 | 207 | 7 | 7 | 399 | 11 | 375 | 8.44e-67 | 234 |
MS.gene30749.t1 | MTR_4g021580 | 36.387 | 393 | 201 | 8 | 17 | 401 | 17 | 368 | 2.16e-65 | 225 |
MS.gene30749.t1 | MTR_4g021580 | 36.387 | 393 | 201 | 8 | 17 | 401 | 17 | 368 | 2.93e-65 | 226 |
MS.gene30749.t1 | MTR_3g064050 | 36.990 | 392 | 203 | 7 | 16 | 399 | 23 | 378 | 7.58e-65 | 228 |
MS.gene30749.t1 | MTR_8g100050 | 34.491 | 432 | 217 | 9 | 19 | 425 | 59 | 449 | 2.50e-64 | 224 |
MS.gene30749.t1 | MTR_5g076270 | 36.735 | 392 | 204 | 7 | 16 | 399 | 21 | 376 | 4.69e-64 | 226 |
MS.gene30749.t1 | MTR_1g024025 | 38.832 | 394 | 185 | 11 | 15 | 397 | 39 | 387 | 5.83e-64 | 228 |
MS.gene30749.t1 | MTR_8g100050 | 34.491 | 432 | 217 | 9 | 19 | 425 | 59 | 449 | 9.99e-64 | 224 |
MS.gene30749.t1 | MTR_2g093740 | 36.641 | 393 | 193 | 9 | 19 | 397 | 56 | 406 | 1.85e-63 | 221 |
MS.gene30749.t1 | MTR_2g093740 | 36.641 | 393 | 193 | 9 | 19 | 397 | 56 | 406 | 7.34e-63 | 221 |
MS.gene30749.t1 | MTR_2g093740 | 36.641 | 393 | 193 | 9 | 19 | 397 | 56 | 406 | 9.32e-63 | 221 |
MS.gene30749.t1 | MTR_4g088210 | 35.750 | 400 | 199 | 9 | 19 | 401 | 38 | 396 | 1.84e-62 | 219 |
MS.gene30749.t1 | MTR_4g088210 | 35.750 | 400 | 199 | 9 | 19 | 401 | 38 | 396 | 3.43e-62 | 218 |
MS.gene30749.t1 | MTR_7g062540 | 34.685 | 444 | 236 | 14 | 16 | 445 | 11 | 414 | 4.10e-62 | 218 |
MS.gene30749.t1 | MTR_4g124900 | 35.627 | 407 | 209 | 9 | 15 | 410 | 19 | 383 | 7.87e-61 | 219 |
MS.gene30749.t1 | MTR_4g124900 | 35.627 | 407 | 209 | 9 | 15 | 410 | 19 | 383 | 7.98e-61 | 219 |
MS.gene30749.t1 | MTR_2g093740 | 35.000 | 400 | 198 | 8 | 19 | 391 | 56 | 420 | 6.94e-60 | 212 |
MS.gene30749.t1 | MTR_2g093740 | 35.000 | 400 | 198 | 8 | 19 | 391 | 56 | 420 | 2.56e-59 | 211 |
MS.gene30749.t1 | MTR_2g093740 | 35.468 | 406 | 193 | 10 | 19 | 397 | 56 | 419 | 3.23e-59 | 212 |
MS.gene30749.t1 | MTR_4g060460 | 33.654 | 416 | 224 | 8 | 19 | 419 | 54 | 432 | 2.50e-58 | 209 |
MS.gene30749.t1 | MTR_4g060460 | 33.654 | 416 | 224 | 8 | 19 | 419 | 54 | 432 | 3.32e-58 | 209 |
MS.gene30749.t1 | MTR_8g027440 | 35.459 | 392 | 207 | 9 | 16 | 401 | 26 | 377 | 5.04e-57 | 203 |
MS.gene30749.t1 | MTR_8g079492 | 38.650 | 326 | 161 | 6 | 77 | 399 | 3 | 292 | 2.70e-55 | 201 |
MS.gene30749.t1 | MTR_2g043250 | 45.161 | 217 | 106 | 3 | 16 | 223 | 20 | 232 | 6.29e-54 | 198 |
MS.gene30749.t1 | MTR_5g062970 | 48.515 | 202 | 96 | 4 | 11 | 207 | 30 | 228 | 7.88e-54 | 183 |
MS.gene30749.t1 | MTR_8g101360 | 45.370 | 216 | 112 | 4 | 11 | 220 | 23 | 238 | 2.04e-50 | 188 |
MS.gene30749.t1 | MTR_8g101360 | 40.625 | 96 | 55 | 2 | 288 | 382 | 271 | 365 | 6.26e-11 | 66.2 |
MS.gene30749.t1 | MTR_2g093740 | 37.455 | 275 | 137 | 3 | 117 | 391 | 38 | 277 | 8.13e-48 | 177 |
MS.gene30749.t1 | MTR_2g093740 | 38.078 | 281 | 132 | 5 | 117 | 397 | 38 | 276 | 1.21e-47 | 177 |
MS.gene30749.t1 | MTR_2g093740 | 35.764 | 288 | 137 | 4 | 117 | 391 | 38 | 290 | 2.68e-44 | 167 |
MS.gene30749.t1 | MTR_2g093740 | 36.395 | 294 | 132 | 6 | 117 | 397 | 38 | 289 | 3.91e-44 | 167 |
MS.gene30749.t1 | MTR_8g446900 | 29.231 | 325 | 182 | 8 | 66 | 386 | 12 | 292 | 1.16e-36 | 141 |
MS.gene30749.t1 | MTR_5g062960 | 39.604 | 202 | 87 | 5 | 277 | 469 | 2 | 177 | 2.01e-35 | 132 |
MS.gene30749.t1 | MTR_5g060770 | 32.870 | 216 | 112 | 6 | 248 | 451 | 120 | 314 | 3.03e-20 | 93.2 |
MS.gene30749.t1 | MTR_5g060770 | 39.726 | 146 | 76 | 4 | 68 | 211 | 9 | 144 | 7.00e-19 | 89.0 |
MS.gene30749.t1 | MTR_5g046120 | 41.379 | 116 | 57 | 5 | 56 | 164 | 11 | 122 | 5.14e-14 | 69.7 |
MS.gene30749.t1 | MTR_5g460910 | 30.000 | 200 | 86 | 8 | 270 | 451 | 146 | 309 | 3.29e-12 | 68.6 |
MS.gene30749.t1 | MTR_1g058350 | 36.752 | 117 | 68 | 4 | 105 | 217 | 65 | 179 | 5.39e-12 | 67.8 |
MS.gene30749.t1 | MTR_8g023990 | 36.364 | 110 | 65 | 2 | 112 | 217 | 167 | 275 | 3.48e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30749.t1 | AT1G77850 | 47.950 | 561 | 267 | 11 | 12 | 560 | 12 | 559 | 2.34e-163 | 479 |
MS.gene30749.t1 | AT1G77850 | 47.950 | 561 | 267 | 11 | 12 | 560 | 12 | 559 | 3.07e-163 | 479 |
MS.gene30749.t1 | AT4G30080 | 42.580 | 566 | 278 | 16 | 16 | 559 | 16 | 556 | 1.54e-120 | 372 |
MS.gene30749.t1 | AT2G28350 | 45.770 | 461 | 212 | 11 | 11 | 445 | 2 | 450 | 2.38e-118 | 366 |
MS.gene30749.t1 | AT2G28350 | 46.171 | 457 | 208 | 11 | 15 | 445 | 6 | 450 | 3.93e-118 | 366 |
MS.gene30749.t1 | AT2G33860 | 36.631 | 374 | 188 | 5 | 19 | 382 | 54 | 388 | 2.32e-68 | 233 |
MS.gene30749.t1 | AT1G30330 | 38.119 | 404 | 202 | 8 | 8 | 399 | 10 | 377 | 3.18e-68 | 238 |
MS.gene30749.t1 | AT1G30330 | 38.119 | 404 | 202 | 8 | 8 | 399 | 10 | 377 | 3.18e-68 | 238 |
MS.gene30749.t1 | AT1G30330 | 38.000 | 400 | 204 | 7 | 8 | 399 | 12 | 375 | 3.84e-68 | 238 |
MS.gene30749.t1 | AT5G37020 | 36.735 | 392 | 204 | 7 | 16 | 399 | 19 | 374 | 1.14e-67 | 234 |
MS.gene30749.t1 | AT5G37020 | 36.735 | 392 | 204 | 7 | 16 | 399 | 19 | 374 | 2.24e-67 | 234 |
MS.gene30749.t1 | AT1G59750 | 37.692 | 390 | 198 | 10 | 19 | 401 | 22 | 373 | 1.32e-65 | 227 |
MS.gene30749.t1 | AT1G59750 | 37.692 | 390 | 198 | 10 | 19 | 401 | 22 | 373 | 1.34e-65 | 227 |
MS.gene30749.t1 | AT1G59750 | 37.692 | 390 | 198 | 10 | 19 | 401 | 22 | 373 | 1.91e-65 | 226 |
MS.gene30749.t1 | AT1G59750 | 37.692 | 390 | 198 | 10 | 19 | 401 | 22 | 373 | 1.91e-65 | 226 |
MS.gene30749.t1 | AT4G23980 | 36.267 | 375 | 190 | 8 | 16 | 382 | 9 | 342 | 3.51e-63 | 219 |
MS.gene30749.t1 | AT4G23980 | 36.267 | 375 | 190 | 8 | 16 | 382 | 9 | 342 | 4.60e-63 | 219 |
MS.gene30749.t1 | AT2G46530 | 35.309 | 405 | 211 | 8 | 12 | 406 | 14 | 377 | 6.70e-63 | 218 |
MS.gene30749.t1 | AT2G46530 | 35.309 | 405 | 211 | 8 | 12 | 406 | 35 | 398 | 1.84e-62 | 217 |
MS.gene30749.t1 | AT5G60450 | 35.279 | 394 | 202 | 7 | 12 | 390 | 34 | 389 | 7.91e-62 | 218 |
MS.gene30749.t1 | AT5G60450 | 35.659 | 387 | 196 | 7 | 19 | 390 | 65 | 413 | 5.75e-61 | 216 |
MS.gene30749.t1 | AT1G19850 | 37.468 | 395 | 188 | 12 | 16 | 397 | 40 | 388 | 5.89e-61 | 218 |
MS.gene30749.t1 | AT1G19850 | 37.468 | 395 | 188 | 12 | 16 | 397 | 51 | 399 | 7.22e-61 | 217 |
MS.gene30749.t1 | AT3G61830 | 34.726 | 383 | 206 | 6 | 16 | 393 | 22 | 365 | 4.03e-60 | 211 |
MS.gene30749.t1 | AT5G62000 | 33.729 | 421 | 224 | 9 | 19 | 426 | 61 | 439 | 1.58e-59 | 213 |
MS.gene30749.t1 | AT5G62000 | 33.729 | 421 | 224 | 9 | 19 | 426 | 61 | 439 | 1.58e-59 | 213 |
MS.gene30749.t1 | AT5G62000 | 33.729 | 421 | 224 | 9 | 19 | 426 | 61 | 439 | 1.58e-59 | 213 |
MS.gene30749.t1 | AT5G62000 | 33.729 | 421 | 224 | 9 | 19 | 426 | 61 | 439 | 1.58e-59 | 213 |
MS.gene30749.t1 | AT5G62000 | 33.729 | 421 | 224 | 9 | 19 | 426 | 61 | 439 | 2.09e-59 | 213 |
MS.gene30749.t1 | AT1G19220 | 35.904 | 376 | 192 | 7 | 16 | 382 | 20 | 355 | 1.95e-58 | 212 |
MS.gene30749.t1 | AT1G35520 | 31.481 | 486 | 255 | 14 | 11 | 463 | 19 | 459 | 2.43e-57 | 203 |
MS.gene30749.t1 | AT1G34410 | 34.684 | 395 | 203 | 12 | 19 | 404 | 27 | 375 | 3.65e-56 | 200 |
MS.gene30749.t1 | AT1G34310 | 34.596 | 396 | 206 | 10 | 19 | 406 | 27 | 377 | 1.11e-55 | 198 |
MS.gene30749.t1 | AT1G35240 | 33.181 | 437 | 228 | 14 | 19 | 437 | 27 | 417 | 1.84e-55 | 197 |
MS.gene30749.t1 | AT5G20730 | 45.161 | 217 | 106 | 3 | 16 | 223 | 21 | 233 | 2.59e-53 | 197 |
MS.gene30749.t1 | AT5G20730 | 45.161 | 217 | 106 | 3 | 16 | 223 | 21 | 233 | 2.76e-53 | 197 |
MS.gene30749.t1 | AT5G20730 | 45.161 | 217 | 106 | 3 | 16 | 223 | 21 | 233 | 2.84e-53 | 197 |
MS.gene30749.t1 | AT1G34390 | 33.586 | 396 | 208 | 11 | 19 | 406 | 27 | 375 | 7.95e-53 | 191 |
MS.gene30749.t1 | AT1G35540 | 32.995 | 394 | 215 | 11 | 19 | 406 | 27 | 377 | 1.06e-51 | 187 |
MS.gene30749.t1 | AT2G33860 | 38.542 | 288 | 136 | 5 | 117 | 401 | 2 | 251 | 1.16e-51 | 184 |
MS.gene30749.t1 | AT5G37020 | 37.895 | 285 | 139 | 5 | 117 | 399 | 31 | 279 | 2.92e-49 | 182 |
MS.gene30749.t1 | AT3G61830 | 34.545 | 330 | 177 | 5 | 64 | 393 | 24 | 314 | 2.67e-48 | 177 |
MS.gene30749.t1 | AT1G34170 | 30.105 | 382 | 209 | 9 | 14 | 384 | 20 | 354 | 1.23e-45 | 169 |
MS.gene30749.t1 | AT2G46530 | 35.786 | 299 | 144 | 8 | 114 | 406 | 34 | 290 | 4.00e-42 | 159 |
MS.gene30749.t1 | AT1G34170 | 28.534 | 382 | 189 | 9 | 14 | 384 | 20 | 328 | 2.78e-39 | 150 |
MS.gene30749.t1 | AT1G34170 | 28.534 | 382 | 189 | 9 | 14 | 384 | 20 | 328 | 1.35e-38 | 149 |
MS.gene30749.t1 | AT1G43950 | 38.725 | 204 | 111 | 7 | 19 | 216 | 27 | 222 | 4.43e-34 | 129 |
MS.gene30749.t1 | AT3G61970 | 34.454 | 119 | 73 | 3 | 104 | 217 | 9 | 127 | 2.45e-12 | 68.6 |
MS.gene30749.t1 | AT2G36080 | 37.273 | 110 | 65 | 2 | 112 | 217 | 33 | 142 | 3.84e-12 | 67.0 |
MS.gene30749.t1 | AT2G36080 | 37.273 | 110 | 65 | 2 | 112 | 217 | 33 | 142 | 4.98e-12 | 66.6 |
MS.gene30749.t1 | AT2G36080 | 37.273 | 110 | 65 | 2 | 112 | 217 | 33 | 142 | 5.68e-12 | 65.1 |
MS.gene30749.t1 | AT2G36080 | 37.273 | 110 | 65 | 2 | 112 | 217 | 33 | 142 | 5.68e-12 | 65.1 |
MS.gene30749.t1 | AT2G46870 | 33.071 | 127 | 79 | 2 | 111 | 232 | 29 | 154 | 2.65e-11 | 65.5 |
MS.gene30749.t1 | AT1G01030 | 33.613 | 119 | 73 | 2 | 103 | 216 | 42 | 159 | 3.74e-11 | 65.5 |
MS.gene30749.t1 | AT4G01500 | 38.542 | 96 | 50 | 2 | 113 | 205 | 32 | 121 | 3.84e-11 | 65.1 |
MS.gene30749.t1 | AT1G01030 | 33.613 | 119 | 73 | 2 | 103 | 216 | 42 | 159 | 3.86e-11 | 65.1 |
Find 176 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCAACTGTTGAGGCTATT+TGG | 0.202921 | 3.1:-60161720 | None:intergenic |
CCTGTAACGTTTCAGCTATT+TGG | 0.208521 | 3.1:+60161538 | MS.gene30749:CDS |
GCGATAGCTCGCCAGAGTTT+GGG | 0.291734 | 3.1:-60159036 | None:intergenic |
AAAAGGACTAGAGGGGTATC+TGG | 0.298766 | 3.1:+60161166 | MS.gene30749:CDS |
CAGGTTTCTGTTCCTGATCA+TGG | 0.299946 | 3.1:+60160011 | MS.gene30749:CDS |
GGCGATAGCTCGCCAGAGTT+TGG | 0.304479 | 3.1:-60159037 | None:intergenic |
AAATCCCTACCGTCAATTCT+AGG | 0.309414 | 3.1:+60159073 | MS.gene30749:CDS |
TCCTCCGTTGGATTATAGTA+TGG | 0.314074 | 3.1:+60159413 | MS.gene30749:CDS |
TCCGGTGGCGGTTGCGGAGG+CGG | 0.344489 | 3.1:+60159797 | MS.gene30749:CDS |
CAGAGTAGTTTGCCTTCCTT+TGG | 0.347823 | 3.1:+60161469 | MS.gene30749:CDS |
CTGTTCCTGATCATGGTGCT+TGG | 0.358718 | 3.1:+60160018 | MS.gene30749:CDS |
TGACAACTTCCGTCTTTGTA+TGG | 0.364281 | 3.1:+60161348 | MS.gene30749:CDS |
TTGGAAGTTTGCAACACTTC+AGG | 0.367022 | 3.1:-60161073 | None:intergenic |
TCCAGGACTACTTGGTTTCA+AGG | 0.368052 | 3.1:+60159978 | MS.gene30749:CDS |
GGCGGCGGAAATGGCAGCAC+AGG | 0.371956 | 3.1:+60159815 | MS.gene30749:CDS |
GGTTGCGGAGGCGGCGGAAA+TGG | 0.372996 | 3.1:+60159806 | MS.gene30749:CDS |
TGGAGACTGATGATTCTTCC+AGG | 0.375310 | 3.1:+60159961 | MS.gene30749:CDS |
CCAAATAGCTGAAACGTTAC+AGG | 0.375667 | 3.1:-60161538 | None:intergenic |
CTGCTGGCATGCAGGGAGCC+AGG | 0.375982 | 3.1:+60161284 | MS.gene30749:CDS |
TTGGAGACGGTGGTAGTACT+TGG | 0.385584 | 3.1:-60158993 | None:intergenic |
TTTGGCAGCAACACAGTGCC+GGG | 0.386977 | 3.1:+60161379 | MS.gene30749:CDS |
CTTTGTATGGGTAACTCCTT+TGG | 0.387691 | 3.1:+60161361 | MS.gene30749:CDS |
TTGTTGATTACTGATGTTCA+TGG | 0.389456 | 3.1:+60159453 | MS.gene30749:CDS |
GTTTCAAGGTGTAGTGTCTC+AGG | 0.398107 | 3.1:+60159992 | MS.gene30749:CDS |
CTGGCTCCCTGCATGCCAGC+AGG | 0.411242 | 3.1:-60161283 | None:intergenic |
GTGAACCCTGTGATAGAAAA+GGG | 0.417152 | 3.1:-60161208 | None:intergenic |
CGCCGGCATTTGTTGACCAC+CGG | 0.418386 | 3.1:+60159516 | MS.gene30749:CDS |
AAATTGCTCGACAGGCTTGA+TGG | 0.418640 | 3.1:+60161691 | MS.gene30749:CDS |
AGCTGAAACGTTACAGGCCC+GGG | 0.423670 | 3.1:-60161532 | None:intergenic |
ATGATTCTTCCAGGACTACT+TGG | 0.424084 | 3.1:+60159970 | MS.gene30749:CDS |
AGAAGAGGTGAGAGATTGTT+CGG | 0.425048 | 3.1:-60159141 | None:intergenic |
GTTGTCTCCGGTGGCGGTTG+CGG | 0.431234 | 3.1:+60159791 | MS.gene30749:CDS |
CTGCCAAGGGCTGACCCACT+TGG | 0.431622 | 3.1:-60161092 | None:intergenic |
CAAGTGGGTCAGCCCTTGGC+AGG | 0.434174 | 3.1:+60161093 | MS.gene30749:CDS |
AACGTTAAGAAGCTTGTTGC+TGG | 0.444485 | 3.1:+60159555 | MS.gene30749:CDS |
GGCAAACTACTCTGGCTCTC+TGG | 0.444672 | 3.1:-60161460 | None:intergenic |
AAATGGCAGCACAGGGGATG+GGG | 0.452139 | 3.1:+60159823 | MS.gene30749:CDS |
AGTGAACCCTGTGATAGAAA+AGG | 0.454541 | 3.1:-60161209 | None:intergenic |
GCCGCCTCCGCAACCGCCAC+CGG | 0.456465 | 3.1:-60159798 | None:intergenic |
GGGGAAGTTGTCTCCGGTGG+CGG | 0.456900 | 3.1:+60159785 | MS.gene30749:CDS |
GGTGGCGGTTGCGGAGGCGG+CGG | 0.459780 | 3.1:+60159800 | MS.gene30749:CDS |
GAAATGGCAGCACAGGGGAT+GGG | 0.460169 | 3.1:+60159822 | MS.gene30749:CDS |
GGAAATGGCAGCACAGGGGA+TGG | 0.461216 | 3.1:+60159821 | MS.gene30749:CDS |
CAAAGGAAGGCAAACTACTC+TGG | 0.464413 | 3.1:-60161468 | None:intergenic |
TCCTGGAATGAGAATCAAAA+TGG | 0.464829 | 3.1:+60159935 | MS.gene30749:CDS |
GGTGGATGAAGAAGAGAAGC+TGG | 0.468766 | 3.1:+60159731 | MS.gene30749:CDS |
AAAGGACTAGAGGGGTATCT+GGG | 0.471476 | 3.1:+60161167 | MS.gene30749:CDS |
CGATCTGTGGAGTGAGAAGT+AGG | 0.471915 | 3.1:+60159709 | MS.gene30749:CDS |
ACCATTTGAACCACTTTCAA+CGG | 0.473718 | 3.1:-60161584 | None:intergenic |
ATCGGAGCAAACACCGCCAC+CGG | 0.479208 | 3.1:-60159667 | None:intergenic |
CCATTTGAACCACTTTCAAC+GGG | 0.480213 | 3.1:-60161583 | None:intergenic |
CTGATGTTCATGGTTTGACT+TGG | 0.481505 | 3.1:+60159463 | MS.gene30749:CDS |
CTTTGGCAGCAACACAGTGC+CGG | 0.482301 | 3.1:+60161378 | MS.gene30749:CDS |
CCACCGGCGCTACTCCGATT+CGG | 0.482322 | 3.1:-60159651 | None:intergenic |
CCCGTTGAAAGTGGTTCAAA+TGG | 0.482554 | 3.1:+60161583 | MS.gene30749:CDS |
CTTACTCAAAATTGCTCGAC+AGG | 0.482573 | 3.1:+60161683 | MS.gene30749:CDS |
AATCCCTACCGTCAATTCTA+GGG | 0.484494 | 3.1:+60159074 | MS.gene30749:CDS |
ATTGTTTCTGATAGATTACA+TGG | 0.486179 | 3.1:+60161044 | MS.gene30749:intron |
AGGGATTTGCACGGCAGCGC+CGG | 0.489281 | 3.1:-60159058 | None:intergenic |
CCTCTCCAAGCACCATGATC+AGG | 0.489733 | 3.1:-60160023 | None:intergenic |
CGGGAAGGGGAAGTTGTCTC+CGG | 0.490275 | 3.1:+60159779 | MS.gene30749:CDS |
ACCTTGAAACCAAGTAGTCC+TGG | 0.491621 | 3.1:-60159979 | None:intergenic |
CACTGGAGATGACAGCAGTA+AGG | 0.497179 | 3.1:+60161615 | MS.gene30749:CDS |
GAGACAGAGCAGAGAATGTA+GGG | 0.503744 | 3.1:-60159174 | None:intergenic |
AGAGAAGCTGGTGGATGAGA+AGG | 0.506899 | 3.1:+60159743 | MS.gene30749:CDS |
CTTCCAAGTGGGTCAGCCCT+TGG | 0.507741 | 3.1:+60161089 | MS.gene30749:CDS |
GGGTTCACTAATTCAACAAT+GGG | 0.507819 | 3.1:+60161223 | MS.gene30749:CDS |
CTTGGTCCATGTGACCTTGA+GGG | 0.511485 | 3.1:-60159107 | None:intergenic |
AATCGGAGTAGCGCCGGTGG+CGG | 0.511889 | 3.1:+60159654 | MS.gene30749:CDS |
GAAGTTGTCACCTGGAAAGT+TGG | 0.512836 | 3.1:-60161335 | None:intergenic |
ATGAGTGTTACTTGGTGTCC+TGG | 0.519012 | 3.1:+60159918 | MS.gene30749:CDS |
GAGACGGTGGTAGTACTTGG+CGG | 0.520685 | 3.1:-60158990 | None:intergenic |
CTGTTCGATTAGTTCCGAAT+CGG | 0.520734 | 3.1:+60159637 | MS.gene30749:CDS |
TAGCTGAAACGTTACAGGCC+CGG | 0.521167 | 3.1:-60161533 | None:intergenic |
GGAGACAGAGCAGAGAATGT+AGG | 0.522633 | 3.1:-60159175 | None:intergenic |
TAGGGACGAGAGAGAAGAAG+AGG | 0.523309 | 3.1:-60159156 | None:intergenic |
CTGTTGAGGCTATTTGGCAC+TGG | 0.523716 | 3.1:-60161714 | None:intergenic |
GAAAGAAGTTCCACCTGCCA+AGG | 0.525099 | 3.1:-60161106 | None:intergenic |
GACAACTTCCGTCTTTGTAT+GGG | 0.527796 | 3.1:+60161349 | MS.gene30749:CDS |
GTGGGTCAGCCCTTGGCAGG+TGG | 0.528173 | 3.1:+60161096 | MS.gene30749:CDS |
GCGGCGGAAATGGCAGCACA+GGG | 0.528509 | 3.1:+60159816 | MS.gene30749:CDS |
GTGGTGTATTATCCGAGAGC+GGG | 0.529625 | 3.1:+60159852 | MS.gene30749:CDS |
TCTGATGCGAACAACGGTGG+TGG | 0.529876 | 3.1:+60159354 | MS.gene30749:CDS |
GTCTCCGGTGGCGGTTGCGG+AGG | 0.531959 | 3.1:+60159794 | MS.gene30749:CDS |
CTACTTCCCTCAAGGTCACA+TGG | 0.532844 | 3.1:+60159101 | MS.gene30749:CDS |
AACCGGTGGTCAACAAATGC+CGG | 0.533689 | 3.1:-60159518 | None:intergenic |
AACTGCAACTCAATGAAACC+CGG | 0.535247 | 3.1:+60161514 | MS.gene30749:CDS |
ACAGAACAGCCCGTTGAAAG+TGG | 0.538177 | 3.1:+60161574 | MS.gene30749:CDS |
AACGGAAAATAGATCATGCC+TGG | 0.538278 | 3.1:-60161302 | None:intergenic |
GAAAGCGGAGGTTGTGGATG+CGG | 0.543290 | 3.1:+60159893 | MS.gene30749:CDS |
CCCCATTGAAAAGGACTAGA+GGG | 0.543634 | 3.1:+60161158 | MS.gene30749:CDS |
TCAAATGGTACTGTTAGCAC+TGG | 0.544462 | 3.1:+60161598 | MS.gene30749:CDS |
TGTTGACCACCGGTTGGAGT+AGG | 0.544509 | 3.1:+60159526 | MS.gene30749:CDS |
TGATGTTCATGGTTTGACTT+GGG | 0.545373 | 3.1:+60159464 | MS.gene30749:CDS |
AAACTCTGGCGAGCTATCGC+CGG | 0.546085 | 3.1:+60159039 | MS.gene30749:CDS |
AAATCCGACCACCCCGCTCT+CGG | 0.548356 | 3.1:-60159864 | None:intergenic |
ACTGGAGATGACAGCAGTAA+GGG | 0.548517 | 3.1:+60161616 | MS.gene30749:CDS |
GTTCACAAACCTACTCCAAC+CGG | 0.549759 | 3.1:-60159535 | None:intergenic |
TTATCCGAGAGCGGGGTGGT+CGG | 0.550098 | 3.1:+60159860 | MS.gene30749:CDS |
ATGCGGCGATGAGTGTTACT+TGG | 0.550397 | 3.1:+60159910 | MS.gene30749:CDS |
CCACACTCAACCCCAAACTC+TGG | 0.551845 | 3.1:+60159025 | MS.gene30749:CDS |
TGTTCGGAAGTGAAGTAGCT+TGG | 0.552094 | 3.1:-60159125 | None:intergenic |
AGGGTTTACTACTTCCCTCA+AGG | 0.555346 | 3.1:+60159093 | MS.gene30749:CDS |
GTAGTAAACCCTAGAATTGA+CGG | 0.555608 | 3.1:-60159082 | None:intergenic |
CGGCACTGTGTTGCTGCCAA+AGG | 0.556216 | 3.1:-60161377 | None:intergenic |
GGCATTTGTTGACCACCGGT+TGG | 0.557182 | 3.1:+60159520 | MS.gene30749:CDS |
CCGTCGTCAGCTTCAATCAC+CGG | 0.562074 | 3.1:-60159294 | None:intergenic |
TGTGTTGAAAGCGGAGGTTG+TGG | 0.562873 | 3.1:+60159887 | MS.gene30749:CDS |
ATCAACAAATTCTGCAACGG+AGG | 0.565435 | 3.1:-60159438 | None:intergenic |
AATGCCGGCGCGGCGTTCCA+CGG | 0.569609 | 3.1:-60159503 | None:intergenic |
AGGCATTAACAACCCTCTTG+AGG | 0.570796 | 3.1:+60161654 | MS.gene30749:CDS |
CAAAGACGGAAGTTGTCACC+TGG | 0.571620 | 3.1:-60161343 | None:intergenic |
TTTACCGTGGAACGCCGCGC+CGG | 0.571717 | 3.1:+60159499 | MS.gene30749:CDS |
AGATTGTGTCTTCCGATCTG+TGG | 0.572758 | 3.1:+60159696 | MS.gene30749:CDS |
ACTAGAGGTGCAATGTTCAT+CGG | 0.573435 | 3.1:+60159603 | MS.gene30749:CDS |
ACAAAATCTGTGCCAAAGGA+AGG | 0.573965 | 3.1:-60161481 | None:intergenic |
CCTGATCATGGTGCTTGGAG+AGG | 0.575468 | 3.1:+60160023 | MS.gene30749:CDS |
ACAGGGGATGGGGTTTGAAG+TGG | 0.577463 | 3.1:+60159833 | MS.gene30749:CDS |
AAACCCTAGAATTGACGGTA+GGG | 0.578545 | 3.1:-60159077 | None:intergenic |
CCACCGTTGTTCGCATCAGA+AGG | 0.582707 | 3.1:-60159351 | None:intergenic |
GTTCCGAATCGGAGTAGCGC+CGG | 0.582911 | 3.1:+60159648 | MS.gene30749:CDS |
CCAGAGTTTGGGGTTGAGTG+TGG | 0.583941 | 3.1:-60159025 | None:intergenic |
AACGTTGGCAGTTCTCACTC+TGG | 0.586514 | 3.1:+60161427 | MS.gene30749:CDS |
GCTTGGTCCATGTGACCTTG+AGG | 0.587306 | 3.1:-60159108 | None:intergenic |
TTGAAGCTGACGACGGTGAG+AGG | 0.587325 | 3.1:+60159301 | MS.gene30749:CDS |
CGATAGCTCGCCAGAGTTTG+GGG | 0.589326 | 3.1:-60159035 | None:intergenic |
GTATCTGGGGTGTTAACTGA+TGG | 0.592887 | 3.1:+60161181 | MS.gene30749:CDS |
GCTTCAATCACCGGAATCCG+TGG | 0.594157 | 3.1:-60159285 | None:intergenic |
CCGAACAAAATCTGTGCCAA+AGG | 0.598966 | 3.1:-60161485 | None:intergenic |
CCAAATAGCCTCAACAGTTG+AGG | 0.599347 | 3.1:+60161720 | MS.gene30749:CDS |
CCGAATCGGAGTAGCGCCGG+TGG | 0.601878 | 3.1:+60159651 | MS.gene30749:CDS |
AATGAGAATCAAAATGGCTG+TGG | 0.607672 | 3.1:+60159941 | MS.gene30749:CDS |
AGGGTTCACTAATTCAACAA+TGG | 0.612370 | 3.1:+60161222 | MS.gene30749:CDS |
ATCGAATCAGCACAAAACCT+CGG | 0.612548 | 3.1:-60159387 | None:intergenic |
GTAATCAACAAATTCTGCAA+CGG | 0.612614 | 3.1:-60159441 | None:intergenic |
GAGTAAGTCGAATCCTCAAG+AGG | 0.613064 | 3.1:-60161667 | None:intergenic |
GTGCTTGGAGAGGTTCACCT+TGG | 0.614825 | 3.1:+60160033 | MS.gene30749:CDS |
AAGGACTAGAGGGGTATCTG+GGG | 0.618552 | 3.1:+60161168 | MS.gene30749:CDS |
CTACTTCTCACTCCACAGAT+CGG | 0.620895 | 3.1:-60159708 | None:intergenic |
ACTGCAACTCAATGAAACCC+GGG | 0.624047 | 3.1:+60161515 | MS.gene30749:CDS |
TGGATCGGCGAGGAAATGAA+CGG | 0.624554 | 3.1:-60159199 | None:intergenic |
TTGGCAGCAACACAGTGCCG+GGG | 0.627502 | 3.1:+60161380 | MS.gene30749:CDS |
TAAACCCTAGAATTGACGGT+AGG | 0.628428 | 3.1:-60159078 | None:intergenic |
TTAACAGTGAAATCATTCAA+CGG | 0.636083 | 3.1:-60159258 | None:intergenic |
AAGGGCTGCAACGAAACTGA+AGG | 0.639246 | 3.1:+60161634 | MS.gene30749:CDS |
GGATGAAGAAGAGAAGCTGG+TGG | 0.642912 | 3.1:+60159734 | MS.gene30749:CDS |
ATAGCACGCCTCAACTGTTG+AGG | 0.645577 | 3.1:-60161728 | None:intergenic |
AGTAAGTCGAATCCTCAAGA+GGG | 0.645578 | 3.1:-60161666 | None:intergenic |
AGGAGTTACCCATACAAAGA+CGG | 0.649086 | 3.1:-60161357 | None:intergenic |
AAAGTACTGTAACTCAACAA+TGG | 0.650302 | 3.1:-60161259 | None:intergenic |
GATCTGTGGAGTGAGAAGTA+GGG | 0.650471 | 3.1:+60159710 | MS.gene30749:CDS |
CCTTCTGATGCGAACAACGG+TGG | 0.652015 | 3.1:+60159351 | MS.gene30749:CDS |
TTGTTTCTGATAGATTACAT+GGG | 0.652931 | 3.1:+60161045 | MS.gene30749:intron |
AAAGAAGTTCCACCTGCCAA+GGG | 0.653496 | 3.1:-60161105 | None:intergenic |
GAGTTTCGTCACATTTACCG+TGG | 0.654474 | 3.1:+60159486 | MS.gene30749:CDS |
GAAGGGGAAGTTGTCTCCGG+TGG | 0.654859 | 3.1:+60159782 | MS.gene30749:CDS |
TGGTGTATTATCCGAGAGCG+GGG | 0.665380 | 3.1:+60159853 | MS.gene30749:CDS |
GTGGTCAACAAATGCCGGCG+CGG | 0.669526 | 3.1:-60159513 | None:intergenic |
ACTCCTTCTGATGCGAACAA+CGG | 0.674390 | 3.1:+60159348 | MS.gene30749:CDS |
AAGACACAATCTCGACACAT+CGG | 0.674917 | 3.1:-60159685 | None:intergenic |
CACAAACCTACTCCAACCGG+TGG | 0.675418 | 3.1:-60159532 | None:intergenic |
CGGCGGAAATGGCAGCACAG+GGG | 0.678622 | 3.1:+60159817 | MS.gene30749:CDS |
TGAACCCTGTGATAGAAAAG+GGG | 0.678709 | 3.1:-60161207 | None:intergenic |
AGTGTTGCAAACTTCCAAGT+GGG | 0.678749 | 3.1:+60161078 | MS.gene30749:CDS |
CTGTGGAGTGAGAAGTAGGG+TGG | 0.681702 | 3.1:+60159713 | MS.gene30749:CDS |
CCCATTGAAAAGGACTAGAG+GGG | 0.682404 | 3.1:+60161159 | MS.gene30749:CDS |
TGTATTATCCGAGAGCGGGG+TGG | 0.682628 | 3.1:+60159856 | MS.gene30749:CDS |
AGTGGTGTATTATCCGAGAG+CGG | 0.685012 | 3.1:+60159851 | MS.gene30749:CDS |
AAGTGTTGCAAACTTCCAAG+TGG | 0.685015 | 3.1:+60161077 | MS.gene30749:CDS |
ATTGACGGTAGGGATTTGCA+CGG | 0.685357 | 3.1:-60159067 | None:intergenic |
GGATCCATACTATAATCCAA+CGG | 0.690465 | 3.1:-60159417 | None:intergenic |
GAACTAATCGAACAGCACGA+CGG | 0.693501 | 3.1:-60159629 | None:intergenic |
CATACATGAAGCATACGCCA+AGG | 0.694470 | 3.1:-60160050 | None:intergenic |
CCGGTGATTGAAGCTGACGA+CGG | 0.709175 | 3.1:+60159294 | MS.gene30749:CDS |
TCCATACTATAATCCAACGG+AGG | 0.710511 | 3.1:-60159414 | None:intergenic |
ATCGGCGAGGAAATGAACGG+CGG | 0.745601 | 3.1:-60159196 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTGAATATATATTTGAT+TGG | - | chr3.1:60160282-60160301 | None:intergenic | 10.0% |
!! | AAATAGATTAAATATGAGTA+TGG | + | chr3.1:60160310-60160329 | MS.gene30749:intron | 15.0% |
!!! | ATAATTTGATCATATTGATT+AGG | + | chr3.1:60160157-60160176 | MS.gene30749:intron | 15.0% |
!!! | CTATCTAAAATAACTAAAAT+TGG | + | chr3.1:60161015-60161034 | MS.gene30749:intron | 15.0% |
!! | AATCTATCAGAAACAATAAA+TGG | - | chr3.1:60161041-60161060 | None:intergenic | 20.0% |
!! | AATGAAGATTCAAAAGAAAA+AGG | - | chr3.1:60160079-60160098 | None:intergenic | 20.0% |
!! | AGTATTCTTCATAAAAACAA+CGG | - | chr3.1:60159586-60159605 | None:intergenic | 20.0% |
!! | TTTGTTGAATTCATGAAATT+TGG | + | chr3.1:60160585-60160604 | MS.gene30749:intron | 20.0% |
! | AAAAAGGAAACGAAAAAACA+AGG | - | chr3.1:60160740-60160759 | None:intergenic | 25.0% |
! | AAAGTTGGAAAAACTTGAAA+CGG | - | chr3.1:60161323-60161342 | None:intergenic | 25.0% |
! | AATACTATATTTGCATGAAG+AGG | + | chr3.1:60160411-60160430 | MS.gene30749:intron | 25.0% |
! | AGTGTTTATCATCTGTTTAA+AGG | + | chr3.1:60160463-60160482 | MS.gene30749:intron | 25.0% |
! | TGAATTCATGAAATTTGGTT+GGG | + | chr3.1:60160590-60160609 | MS.gene30749:intron | 25.0% |
! | TTAACAGTGAAATCATTCAA+CGG | - | chr3.1:60159261-60159280 | None:intergenic | 25.0% |
! | TTGAATTCATGAAATTTGGT+TGG | + | chr3.1:60160589-60160608 | MS.gene30749:intron | 25.0% |
!! | AAACATGCATTTTATCTAGT+TGG | + | chr3.1:60160180-60160199 | MS.gene30749:intron | 25.0% |
!! | ATTTCACTGTTAATTTTCCA+CGG | + | chr3.1:60159268-60159287 | MS.gene30749:CDS | 25.0% |
!! | GTAAAATTTTGTGAAACCAA+TGG | + | chr3.1:60160648-60160667 | MS.gene30749:intron | 25.0% |
!! | GTTTTTATGAAGAATACTAG+AGG | + | chr3.1:60159588-60159607 | MS.gene30749:CDS | 25.0% |
!! | TAAGGAAAAATCATTTTGCA+AGG | + | chr3.1:60160357-60160376 | MS.gene30749:intron | 25.0% |
!! | TAGAACATAGAAGTGATTTT+AGG | + | chr3.1:60160621-60160640 | MS.gene30749:intron | 25.0% |
!! | TGATTTTTCTATATCTGACT+TGG | + | chr3.1:60160869-60160888 | MS.gene30749:intron | 25.0% |
!!! | ACTTAATGTTGCTTTCAAAA+TGG | + | chr3.1:60160249-60160268 | MS.gene30749:intron | 25.0% |
!!! | ATTGTTTCTGATAGATTACA+TGG | + | chr3.1:60161044-60161063 | MS.gene30749:intron | 25.0% |
!!! | TTGTTTCTGATAGATTACAT+GGG | + | chr3.1:60161045-60161064 | MS.gene30749:intron | 25.0% |
AAACCAATGGATACCATTAT+TGG | + | chr3.1:60160661-60160680 | MS.gene30749:intron | 30.0% | |
AACCAATGGATACCATTATT+GGG | + | chr3.1:60160662-60160681 | MS.gene30749:intron | 30.0% | |
AATCTCATAAGTCCCAATAA+TGG | - | chr3.1:60160677-60160696 | None:intergenic | 30.0% | |
CAACAAATCAACTGTTAACA+TGG | - | chr3.1:60160504-60160523 | None:intergenic | 30.0% | |
GCAATCCAGATTTCAAAAAA+AGG | - | chr3.1:60160756-60160775 | None:intergenic | 30.0% | |
GTAATCAACAAATTCTGCAA+CGG | - | chr3.1:60159444-60159463 | None:intergenic | 30.0% | |
TAAATATGAGTATGGAAGAG+TGG | + | chr3.1:60160318-60160337 | MS.gene30749:intron | 30.0% | |
TTCATGAATTCAACAAAGCA+GGG | - | chr3.1:60160582-60160601 | None:intergenic | 30.0% | |
TTTCATGAATTCAACAAAGC+AGG | - | chr3.1:60160583-60160602 | None:intergenic | 30.0% | |
! | TTGTTGATTACTGATGTTCA+TGG | + | chr3.1:60159453-60159472 | MS.gene30749:CDS | 30.0% |
!! | AAAGTACTGTAACTCAACAA+TGG | - | chr3.1:60161262-60161281 | None:intergenic | 30.0% |
!! | GATTCTTCGTATCATTTTTG+TGG | + | chr3.1:60160926-60160945 | MS.gene30749:intron | 30.0% |
!! | GTTGAAAAAGATTTTAACCC+CGG | - | chr3.1:60161400-60161419 | None:intergenic | 30.0% |
!!! | CGTTTCCTTTTTTTGAAATC+TGG | + | chr3.1:60160748-60160767 | MS.gene30749:intron | 30.0% |
!!! | GGGGTTAAAATCTTTTTCAA+CGG | + | chr3.1:60161399-60161418 | MS.gene30749:CDS | 30.0% |
AAGCTTAGCAAAAACCTCAT+CGG | - | chr3.1:60159229-60159248 | None:intergenic | 35.0% | |
AATGAGAATCAAAATGGCTG+TGG | + | chr3.1:60159941-60159960 | MS.gene30749:CDS | 35.0% | |
ACCATTTGAACCACTTTCAA+CGG | - | chr3.1:60161587-60161606 | None:intergenic | 35.0% | |
AGGGTTCACTAATTCAACAA+TGG | + | chr3.1:60161222-60161241 | MS.gene30749:CDS | 35.0% | |
GGATCCATACTATAATCCAA+CGG | - | chr3.1:60159420-60159439 | None:intergenic | 35.0% | |
GGGTTCACTAATTCAACAAT+GGG | + | chr3.1:60161223-60161242 | MS.gene30749:CDS | 35.0% | |
GTAGTAAACCCTAGAATTGA+CGG | - | chr3.1:60159085-60159104 | None:intergenic | 35.0% | |
TCCTGGAATGAGAATCAAAA+TGG | + | chr3.1:60159935-60159954 | MS.gene30749:CDS | 35.0% | |
TTCATGAAATTTGGTTGGGT+TGG | + | chr3.1:60160594-60160613 | MS.gene30749:intron | 35.0% | |
TTGCATGAAGAGGTTGAAAT+GGG | + | chr3.1:60160421-60160440 | MS.gene30749:intron | 35.0% | |
TTGTTCAGTTGCTTCTGTTA+CGG | + | chr3.1:60160521-60160540 | MS.gene30749:intron | 35.0% | |
TTTGCATGAAGAGGTTGAAA+TGG | + | chr3.1:60160420-60160439 | MS.gene30749:intron | 35.0% | |
! | GTTGCTTTCAAAATGGAATG+TGG | + | chr3.1:60160256-60160275 | MS.gene30749:intron | 35.0% |
! | TCAAGTTTTTCCAACTTTCC+AGG | + | chr3.1:60161325-60161344 | MS.gene30749:CDS | 35.0% |
! | TGATGTTCATGGTTTGACTT+GGG | + | chr3.1:60159464-60159483 | MS.gene30749:CDS | 35.0% |
! | TGTTAATTTTCCACGGATTC+CGG | + | chr3.1:60159275-60159294 | MS.gene30749:CDS | 35.0% |
! | TTTGACTGAGAATGCTTTTG+TGG | + | chr3.1:60160210-60160229 | MS.gene30749:intron | 35.0% |
! | TTTTCAACGGATCTAAACGT+TGG | + | chr3.1:60161412-60161431 | MS.gene30749:CDS | 35.0% |
AAACCCTAGAATTGACGGTA+GGG | - | chr3.1:60159080-60159099 | None:intergenic | 40.0% | |
AAATCCCTACCGTCAATTCT+AGG | + | chr3.1:60159073-60159092 | MS.gene30749:CDS | 40.0% | |
AACGGAAAATAGATCATGCC+TGG | - | chr3.1:60161305-60161324 | None:intergenic | 40.0% | |
AACTGCAACTCAATGAAACC+CGG | + | chr3.1:60161514-60161533 | MS.gene30749:CDS | 40.0% | |
AAGACACAATCTCGACACAT+CGG | - | chr3.1:60159688-60159707 | None:intergenic | 40.0% | |
AATCCCTACCGTCAATTCTA+GGG | + | chr3.1:60159074-60159093 | MS.gene30749:CDS | 40.0% | |
ACAAAATCTGTGCCAAAGGA+AGG | - | chr3.1:60161484-60161503 | None:intergenic | 40.0% | |
AGAAGAGGTGAGAGATTGTT+CGG | - | chr3.1:60159144-60159163 | None:intergenic | 40.0% | |
AGGAGTTACCCATACAAAGA+CGG | - | chr3.1:60161360-60161379 | None:intergenic | 40.0% | |
AGTAAGTCGAATCCTCAAGA+GGG | - | chr3.1:60161669-60161688 | None:intergenic | 40.0% | |
AGTGAACCCTGTGATAGAAA+AGG | - | chr3.1:60161212-60161231 | None:intergenic | 40.0% | |
AGTGTTGCAAACTTCCAAGT+GGG | + | chr3.1:60161078-60161097 | MS.gene30749:CDS | 40.0% | |
ATCAACAAATTCTGCAACGG+AGG | - | chr3.1:60159441-60159460 | None:intergenic | 40.0% | |
ATCGAATCAGCACAAAACCT+CGG | - | chr3.1:60159390-60159409 | None:intergenic | 40.0% | |
ATGATTCTTCCAGGACTACT+TGG | + | chr3.1:60159970-60159989 | MS.gene30749:CDS | 40.0% | |
CCAAATAGCTGAAACGTTAC+AGG | - | chr3.1:60161541-60161560 | None:intergenic | 40.0% | |
CCATTTGAACCACTTTCAAC+GGG | - | chr3.1:60161586-60161605 | None:intergenic | 40.0% | |
CCTGTAACGTTTCAGCTATT+TGG | + | chr3.1:60161538-60161557 | MS.gene30749:CDS | 40.0% | |
CTGATGTTCATGGTTTGACT+TGG | + | chr3.1:60159463-60159482 | MS.gene30749:CDS | 40.0% | |
CTTACTCAAAATTGCTCGAC+AGG | + | chr3.1:60161683-60161702 | MS.gene30749:CDS | 40.0% | |
CTTTGTATGGGTAACTCCTT+TGG | + | chr3.1:60161361-60161380 | MS.gene30749:CDS | 40.0% | |
GACAACTTCCGTCTTTGTAT+GGG | + | chr3.1:60161349-60161368 | MS.gene30749:CDS | 40.0% | |
GTCCCAATAATGGTATCCAT+TGG | - | chr3.1:60160667-60160686 | None:intergenic | 40.0% | |
GTGAACCCTGTGATAGAAAA+GGG | - | chr3.1:60161211-60161230 | None:intergenic | 40.0% | |
TAAACCCTAGAATTGACGGT+AGG | - | chr3.1:60159081-60159100 | None:intergenic | 40.0% | |
TCAAATGGTACTGTTAGCAC+TGG | + | chr3.1:60161598-60161617 | MS.gene30749:CDS | 40.0% | |
TCCATACTATAATCCAACGG+AGG | - | chr3.1:60159417-60159436 | None:intergenic | 40.0% | |
TCCTCCGTTGGATTATAGTA+TGG | + | chr3.1:60159413-60159432 | MS.gene30749:CDS | 40.0% | |
TGAACCCTGTGATAGAAAAG+GGG | - | chr3.1:60161210-60161229 | None:intergenic | 40.0% | |
TGAAGAGGTTGAAATGGGTA+AGG | + | chr3.1:60160426-60160445 | MS.gene30749:intron | 40.0% | |
TGACAACTTCCGTCTTTGTA+TGG | + | chr3.1:60161348-60161367 | MS.gene30749:CDS | 40.0% | |
TTGGAAGTTTGCAACACTTC+AGG | - | chr3.1:60161076-60161095 | None:intergenic | 40.0% | |
! | AAGTGTTGCAAACTTCCAAG+TGG | + | chr3.1:60161077-60161096 | MS.gene30749:CDS | 40.0% |
! | ACTAGAGGTGCAATGTTCAT+CGG | + | chr3.1:60159603-60159622 | MS.gene30749:CDS | 40.0% |
! | AGTTACAGTACTTTTCCTGC+TGG | + | chr3.1:60161268-60161287 | MS.gene30749:CDS | 40.0% |
! | CCTTTGGCACAGATTTTGTT+CGG | + | chr3.1:60161485-60161504 | MS.gene30749:CDS | 40.0% |
! | CTGTTCGATTAGTTCCGAAT+CGG | + | chr3.1:60159637-60159656 | MS.gene30749:CDS | 40.0% |
! | GTCGGATTTTGTGTTGAAAG+CGG | + | chr3.1:60159878-60159897 | MS.gene30749:CDS | 40.0% |
! | TGATTCGATTTTTCCTCCGT+TGG | + | chr3.1:60159401-60159420 | MS.gene30749:CDS | 40.0% |
!! | AACGTTAAGAAGCTTGTTGC+TGG | + | chr3.1:60159555-60159574 | MS.gene30749:CDS | 40.0% |
!!! | AACCTCATCGGTTTTTGGAT+CGG | - | chr3.1:60159217-60159236 | None:intergenic | 40.0% |
!!! | GCAAAAACCTCATCGGTTTT+TGG | - | chr3.1:60159222-60159241 | None:intergenic | 40.0% |
!!! | GCCATTTTGATTCTCATTCC+AGG | - | chr3.1:60159939-60159958 | None:intergenic | 40.0% |
!!! | TTGAGTGTGGTTGCGTTTTT+TGG | - | chr3.1:60159015-60159034 | None:intergenic | 40.0% |
AAAGAAGTTCCACCTGCCAA+GGG | - | chr3.1:60161108-60161127 | None:intergenic | 45.0% | |
AAATTGCTCGACAGGCTTGA+TGG | + | chr3.1:60161691-60161710 | MS.gene30749:CDS | 45.0% | |
ACCTTGAAACCAAGTAGTCC+TGG | - | chr3.1:60159982-60160001 | None:intergenic | 45.0% | |
ACTCCTTCTGATGCGAACAA+CGG | + | chr3.1:60159348-60159367 | MS.gene30749:CDS | 45.0% | |
ACTGCAACTCAATGAAACCC+GGG | + | chr3.1:60161515-60161534 | MS.gene30749:CDS | 45.0% | |
ACTGGAGATGACAGCAGTAA+GGG | + | chr3.1:60161616-60161635 | MS.gene30749:CDS | 45.0% | |
AGATTGTGTCTTCCGATCTG+TGG | + | chr3.1:60159696-60159715 | MS.gene30749:CDS | 45.0% | |
AGGCATTAACAACCCTCTTG+AGG | + | chr3.1:60161654-60161673 | MS.gene30749:CDS | 45.0% | |
AGGGTTTACTACTTCCCTCA+AGG | + | chr3.1:60159093-60159112 | MS.gene30749:CDS | 45.0% | |
AGTGGTGTATTATCCGAGAG+CGG | + | chr3.1:60159851-60159870 | MS.gene30749:CDS | 45.0% | |
ATTGACGGTAGGGATTTGCA+CGG | - | chr3.1:60159070-60159089 | None:intergenic | 45.0% | |
CAAAGGAAGGCAAACTACTC+TGG | - | chr3.1:60161471-60161490 | None:intergenic | 45.0% | |
CAGGTTTCTGTTCCTGATCA+TGG | + | chr3.1:60160011-60160030 | MS.gene30749:CDS | 45.0% | |
CATACATGAAGCATACGCCA+AGG | - | chr3.1:60160053-60160072 | None:intergenic | 45.0% | |
CCAAATAGCCTCAACAGTTG+AGG | + | chr3.1:60161720-60161739 | MS.gene30749:CDS | 45.0% | |
CCCATTGAAAAGGACTAGAG+GGG | + | chr3.1:60161159-60161178 | MS.gene30749:CDS | 45.0% | |
CCCCATTGAAAAGGACTAGA+GGG | + | chr3.1:60161158-60161177 | MS.gene30749:CDS | 45.0% | |
CCCGTTGAAAGTGGTTCAAA+TGG | + | chr3.1:60161583-60161602 | MS.gene30749:CDS | 45.0% | |
CCGAACAAAATCTGTGCCAA+AGG | - | chr3.1:60161488-60161507 | None:intergenic | 45.0% | |
CCTCAACTGTTGAGGCTATT+TGG | - | chr3.1:60161723-60161742 | None:intergenic | 45.0% | |
CTACTTCTCACTCCACAGAT+CGG | - | chr3.1:60159711-60159730 | None:intergenic | 45.0% | |
CTTGGCGTATGCTTCATGTA+TGG | + | chr3.1:60160051-60160070 | MS.gene30749:intron | 45.0% | |
GAACTAATCGAACAGCACGA+CGG | - | chr3.1:60159632-60159651 | None:intergenic | 45.0% | |
GAAGTTGTCACCTGGAAAGT+TGG | - | chr3.1:60161338-60161357 | None:intergenic | 45.0% | |
GAGACAGAGCAGAGAATGTA+GGG | - | chr3.1:60159177-60159196 | None:intergenic | 45.0% | |
GAGTAAGTCGAATCCTCAAG+AGG | - | chr3.1:60161670-60161689 | None:intergenic | 45.0% | |
GAGTTTCGTCACATTTACCG+TGG | + | chr3.1:60159486-60159505 | MS.gene30749:CDS | 45.0% | |
GATCTGTGGAGTGAGAAGTA+GGG | + | chr3.1:60159710-60159729 | MS.gene30749:CDS | 45.0% | |
GTTCACAAACCTACTCCAAC+CGG | - | chr3.1:60159538-60159557 | None:intergenic | 45.0% | |
GTTTCAAGGTGTAGTGTCTC+AGG | + | chr3.1:60159992-60160011 | MS.gene30749:CDS | 45.0% | |
TCCAGGACTACTTGGTTTCA+AGG | + | chr3.1:60159978-60159997 | MS.gene30749:CDS | 45.0% | |
TGGAGACTGATGATTCTTCC+AGG | + | chr3.1:60159961-60159980 | MS.gene30749:CDS | 45.0% | |
TGTTCGGAAGTGAAGTAGCT+TGG | - | chr3.1:60159128-60159147 | None:intergenic | 45.0% | |
! | ACCCCTCTAGTCCTTTTCAA+TGG | - | chr3.1:60161163-60161182 | None:intergenic | 45.0% |
! | AGTCCTTTTCAATGGGGGAA+AGG | - | chr3.1:60161155-60161174 | None:intergenic | 45.0% |
! | CAGAGTAGTTTGCCTTCCTT+TGG | + | chr3.1:60161469-60161488 | MS.gene30749:CDS | 45.0% |
! | CCCCTCTAGTCCTTTTCAAT+GGG | - | chr3.1:60161162-60161181 | None:intergenic | 45.0% |
! | CCCTCTAGTCCTTTTCAATG+GGG | - | chr3.1:60161161-60161180 | None:intergenic | 45.0% |
! | CCTCTAGTCCTTTTCAATGG+GGG | - | chr3.1:60161160-60161179 | None:intergenic | 45.0% |
! | GAGACCCCTTTTCTATCACA+GGG | + | chr3.1:60161203-60161222 | MS.gene30749:CDS | 45.0% |
! | GGATTTTGTGTTGAAAGCGG+AGG | + | chr3.1:60159881-60159900 | MS.gene30749:CDS | 45.0% |
! | GTATCTGGGGTGTTAACTGA+TGG | + | chr3.1:60161181-60161200 | MS.gene30749:CDS | 45.0% |
! | GTCCTTTTCAATGGGGGAAA+GGG | - | chr3.1:60161154-60161173 | None:intergenic | 45.0% |
! | TCCTTTTCAATGGGGGAAAG+GGG | - | chr3.1:60161153-60161172 | None:intergenic | 45.0% |
!! | AAAAGGACTAGAGGGGTATC+TGG | + | chr3.1:60161166-60161185 | MS.gene30749:CDS | 45.0% |
!! | AAAGGACTAGAGGGGTATCT+GGG | + | chr3.1:60161167-60161186 | MS.gene30749:CDS | 45.0% |
!! | ATGAGTGTTACTTGGTGTCC+TGG | + | chr3.1:60159918-60159937 | MS.gene30749:CDS | 45.0% |
!! | GGCTGTGGCATGTGTTTTTA+AGG | + | chr3.1:60160339-60160358 | MS.gene30749:intron | 45.0% |
!!! | GTGGTTGCGTTTTTTGGAGA+CGG | - | chr3.1:60159009-60159028 | None:intergenic | 45.0% |
AACCGGTGGTCAACAAATGC+CGG | - | chr3.1:60159521-60159540 | None:intergenic | 50.0% | |
AACGTTGGCAGTTCTCACTC+TGG | + | chr3.1:60161427-60161446 | MS.gene30749:CDS | 50.0% | |
AAGGGCTGCAACGAAACTGA+AGG | + | chr3.1:60161634-60161653 | MS.gene30749:CDS | 50.0% | |
ACAGAACAGCCCGTTGAAAG+TGG | + | chr3.1:60161574-60161593 | MS.gene30749:CDS | 50.0% | |
ATAGCACGCCTCAACTGTTG+AGG | - | chr3.1:60161731-60161750 | None:intergenic | 50.0% | |
CAAAGACGGAAGTTGTCACC+TGG | - | chr3.1:60161346-60161365 | None:intergenic | 50.0% | |
CACTGGAGATGACAGCAGTA+AGG | + | chr3.1:60161615-60161634 | MS.gene30749:CDS | 50.0% | |
CCCCCATTGAAAAGGACTAG+AGG | + | chr3.1:60161157-60161176 | MS.gene30749:CDS | 50.0% | |
CGATCTGTGGAGTGAGAAGT+AGG | + | chr3.1:60159709-60159728 | MS.gene30749:CDS | 50.0% | |
CTACTTCCCTCAAGGTCACA+TGG | + | chr3.1:60159101-60159120 | MS.gene30749:CDS | 50.0% | |
CTGTTCCTGATCATGGTGCT+TGG | + | chr3.1:60160018-60160037 | MS.gene30749:CDS | 50.0% | |
CTGTTGAGGCTATTTGGCAC+TGG | - | chr3.1:60161717-60161736 | None:intergenic | 50.0% | |
CTTGGTCCATGTGACCTTGA+GGG | - | chr3.1:60159110-60159129 | None:intergenic | 50.0% | |
GAAAGAAGTTCCACCTGCCA+AGG | - | chr3.1:60161109-60161128 | None:intergenic | 50.0% | |
GGAGACAGAGCAGAGAATGT+AGG | - | chr3.1:60159178-60159197 | None:intergenic | 50.0% | |
GGATGAAGAAGAGAAGCTGG+TGG | + | chr3.1:60159734-60159753 | MS.gene30749:CDS | 50.0% | |
GGTGGATGAAGAAGAGAAGC+TGG | + | chr3.1:60159731-60159750 | MS.gene30749:CDS | 50.0% | |
GTGGTGTATTATCCGAGAGC+GGG | + | chr3.1:60159852-60159871 | MS.gene30749:CDS | 50.0% | |
TAGCTGAAACGTTACAGGCC+CGG | - | chr3.1:60161536-60161555 | None:intergenic | 50.0% | |
TAGGGACGAGAGAGAAGAAG+AGG | - | chr3.1:60159159-60159178 | None:intergenic | 50.0% | |
TGAGTATGGAAGAGTGGCTG+TGG | + | chr3.1:60160324-60160343 | MS.gene30749:intron | 50.0% | |
TGGATCGGCGAGGAAATGAA+CGG | - | chr3.1:60159202-60159221 | None:intergenic | 50.0% | |
TGGTGTATTATCCGAGAGCG+GGG | + | chr3.1:60159853-60159872 | MS.gene30749:CDS | 50.0% | |
TGTGTTGAAAGCGGAGGTTG+TGG | + | chr3.1:60159887-60159906 | MS.gene30749:CDS | 50.0% | |
TTGGAGACGGTGGTAGTACT+TGG | - | chr3.1:60158996-60159015 | None:intergenic | 50.0% | |
! | ACTTTTCCTGCTGGCATGCA+GGG | + | chr3.1:60161277-60161296 | MS.gene30749:CDS | 50.0% |
! | AGAGAAGCTGGTGGATGAGA+AGG | + | chr3.1:60159743-60159762 | MS.gene30749:CDS | 50.0% |
! | ATGCGGCGATGAGTGTTACT+TGG | + | chr3.1:60159910-60159929 | MS.gene30749:CDS | 50.0% |
! | CCTTTTCAATGGGGGAAAGG+GGG | - | chr3.1:60161152-60161171 | None:intergenic | 50.0% |
! | GGAGACCCCTTTTCTATCAC+AGG | + | chr3.1:60161202-60161221 | MS.gene30749:CDS | 50.0% |
! | TACTTTTCCTGCTGGCATGC+AGG | + | chr3.1:60161276-60161295 | MS.gene30749:CDS | 50.0% |
!! | AAGGACTAGAGGGGTATCTG+GGG | + | chr3.1:60161168-60161187 | MS.gene30749:CDS | 50.0% |
!!! | GTGGTGGATTTTCTGTTCCG+AGG | + | chr3.1:60159370-60159389 | MS.gene30749:CDS | 50.0% |
!!! | GTTGCGTTTTTTGGAGACGG+TGG | - | chr3.1:60159006-60159025 | None:intergenic | 50.0% |
!!! | TGGATGAGAAGGCGTTTTCG+AGG | + | chr3.1:60159754-60159773 | MS.gene30749:CDS | 50.0% |
AAACTCTGGCGAGCTATCGC+CGG | + | chr3.1:60159039-60159058 | MS.gene30749:CDS | 55.0% | |
AAATGGCAGCACAGGGGATG+GGG | + | chr3.1:60159823-60159842 | MS.gene30749:CDS | 55.0% | |
ACAGGGGATGGGGTTTGAAG+TGG | + | chr3.1:60159833-60159852 | MS.gene30749:CDS | 55.0% | |
AGCTGAAACGTTACAGGCCC+GGG | - | chr3.1:60161535-60161554 | None:intergenic | 55.0% | |
ATCGGCGAGGAAATGAACGG+CGG | - | chr3.1:60159199-60159218 | None:intergenic | 55.0% | |
CACAAACCTACTCCAACCGG+TGG | - | chr3.1:60159535-60159554 | None:intergenic | 55.0% | |
CCACACTCAACCCCAAACTC+TGG | + | chr3.1:60159025-60159044 | MS.gene30749:CDS | 55.0% | |
CCACCGTTGTTCGCATCAGA+AGG | - | chr3.1:60159354-60159373 | None:intergenic | 55.0% | |
CCCCCTTTCCCCCATTGAAA+AGG | + | chr3.1:60161149-60161168 | MS.gene30749:CDS | 55.0% | |
CCGGTGATTGAAGCTGACGA+CGG | + | chr3.1:60159294-60159313 | MS.gene30749:CDS | 55.0% | |
CCGTCGTCAGCTTCAATCAC+CGG | - | chr3.1:60159297-60159316 | None:intergenic | 55.0% | |
CCTCTCCAAGCACCATGATC+AGG | - | chr3.1:60160026-60160045 | None:intergenic | 55.0% | |
CCTGATCATGGTGCTTGGAG+AGG | + | chr3.1:60160023-60160042 | MS.gene30749:CDS | 55.0% | |
CCTTCTGATGCGAACAACGG+TGG | + | chr3.1:60159351-60159370 | MS.gene30749:CDS | 55.0% | |
CGATAGCTCGCCAGAGTTTG+GGG | - | chr3.1:60159038-60159057 | None:intergenic | 55.0% | |
CGCCGATCCAAAAACCGATG+AGG | + | chr3.1:60159212-60159231 | MS.gene30749:CDS | 55.0% | |
CTGTGGAGTGAGAAGTAGGG+TGG | + | chr3.1:60159713-60159732 | MS.gene30749:CDS | 55.0% | |
CTTTGGCAGCAACACAGTGC+CGG | + | chr3.1:60161378-60161397 | MS.gene30749:CDS | 55.0% | |
GAAAGCGGAGGTTGTGGATG+CGG | + | chr3.1:60159893-60159912 | MS.gene30749:CDS | 55.0% | |
GAAATGGCAGCACAGGGGAT+GGG | + | chr3.1:60159822-60159841 | MS.gene30749:CDS | 55.0% | |
GAGACGGTGGTAGTACTTGG+CGG | - | chr3.1:60158993-60159012 | None:intergenic | 55.0% | |
GCGATAGCTCGCCAGAGTTT+GGG | - | chr3.1:60159039-60159058 | None:intergenic | 55.0% | |
GCTTCAATCACCGGAATCCG+TGG | - | chr3.1:60159288-60159307 | None:intergenic | 55.0% | |
GCTTGGTCCATGTGACCTTG+AGG | - | chr3.1:60159111-60159130 | None:intergenic | 55.0% | |
GTGCTTGGAGAGGTTCACCT+TGG | + | chr3.1:60160033-60160052 | MS.gene30749:CDS | 55.0% | |
TCTGATGCGAACAACGGTGG+TGG | + | chr3.1:60159354-60159373 | MS.gene30749:CDS | 55.0% | |
TGTATTATCCGAGAGCGGGG+TGG | + | chr3.1:60159856-60159875 | MS.gene30749:CDS | 55.0% | |
TTGAAGCTGACGACGGTGAG+AGG | + | chr3.1:60159301-60159320 | MS.gene30749:CDS | 55.0% | |
TTTGGCAGCAACACAGTGCC+GGG | + | chr3.1:60161379-60161398 | MS.gene30749:CDS | 55.0% | |
! | ATGGGGGAAAGGGGGTATGA+AGG | - | chr3.1:60161144-60161163 | None:intergenic | 55.0% |
! | CCAGAGTTTGGGGTTGAGTG+TGG | - | chr3.1:60159028-60159047 | None:intergenic | 55.0% |
! | GGAAAGGGGGTATGAAGGGA+AGG | - | chr3.1:60161139-60161158 | None:intergenic | 55.0% |
! | GGCATTTGTTGACCACCGGT+TGG | + | chr3.1:60159520-60159539 | MS.gene30749:CDS | 55.0% |
! | TGGGGGAAAGGGGGTATGAA+GGG | - | chr3.1:60161143-60161162 | None:intergenic | 55.0% |
! | TGTTGACCACCGGTTGGAGT+AGG | + | chr3.1:60159526-60159545 | MS.gene30749:CDS | 55.0% |
!! | GGCAAACTACTCTGGCTCTC+TGG | - | chr3.1:60161463-60161482 | None:intergenic | 55.0% |
!!! | AGAAGGCGTTTTCGAGGCAC+GGG | + | chr3.1:60159760-60159779 | MS.gene30749:CDS | 55.0% |
!!! | CATCGGTTTTTGGATCGGCG+AGG | - | chr3.1:60159212-60159231 | None:intergenic | 55.0% |
!!! | GAGAAGGCGTTTTCGAGGCA+CGG | + | chr3.1:60159759-60159778 | MS.gene30749:CDS | 55.0% |
AAATCCGACCACCCCGCTCT+CGG | - | chr3.1:60159867-60159886 | None:intergenic | 60.0% | |
ATCGGAGCAAACACCGCCAC+CGG | - | chr3.1:60159670-60159689 | None:intergenic | 60.0% | |
CGGGAAGGGGAAGTTGTCTC+CGG | + | chr3.1:60159779-60159798 | MS.gene30749:CDS | 60.0% | |
CTTCCAAGTGGGTCAGCCCT+TGG | + | chr3.1:60161089-60161108 | MS.gene30749:CDS | 60.0% | |
GAAGGGGAAGTTGTCTCCGG+TGG | + | chr3.1:60159782-60159801 | MS.gene30749:CDS | 60.0% | |
GGAAATGGCAGCACAGGGGA+TGG | + | chr3.1:60159821-60159840 | MS.gene30749:CDS | 60.0% | |
GGCGATAGCTCGCCAGAGTT+TGG | - | chr3.1:60159040-60159059 | None:intergenic | 60.0% | |
GTGGTCAACAAATGCCGGCG+CGG | - | chr3.1:60159516-60159535 | None:intergenic | 60.0% | |
GTTCCGAATCGGAGTAGCGC+CGG | + | chr3.1:60159648-60159667 | MS.gene30749:CDS | 60.0% | |
TTATCCGAGAGCGGGGTGGT+CGG | + | chr3.1:60159860-60159879 | MS.gene30749:CDS | 60.0% | |
TTGGCAGCAACACAGTGCCG+GGG | + | chr3.1:60161380-60161399 | MS.gene30749:CDS | 60.0% | |
! | CGCCGGCATTTGTTGACCAC+CGG | + | chr3.1:60159516-60159535 | MS.gene30749:CDS | 60.0% |
! | CGGCACTGTGTTGCTGCCAA+AGG | - | chr3.1:60161380-60161399 | None:intergenic | 60.0% |
!! | CGTTTTCGAGGCACGGGAAG+GGG | + | chr3.1:60159766-60159785 | MS.gene30749:CDS | 60.0% |
!! | GCGTTTTCGAGGCACGGGAA+GGG | + | chr3.1:60159765-60159784 | MS.gene30749:CDS | 60.0% |
AGGGATTTGCACGGCAGCGC+CGG | - | chr3.1:60159061-60159080 | None:intergenic | 65.0% | |
CAAGTGGGTCAGCCCTTGGC+AGG | + | chr3.1:60161093-60161112 | MS.gene30749:CDS | 65.0% | |
CCACCGGCGCTACTCCGATT+CGG | - | chr3.1:60159654-60159673 | None:intergenic | 65.0% | |
CGGCGGAAATGGCAGCACAG+GGG | + | chr3.1:60159817-60159836 | MS.gene30749:CDS | 65.0% | |
CTGCCAAGGGCTGACCCACT+TGG | - | chr3.1:60161095-60161114 | None:intergenic | 65.0% | |
GCGGCGGAAATGGCAGCACA+GGG | + | chr3.1:60159816-60159835 | MS.gene30749:CDS | 65.0% | |
GGGGAAGTTGTCTCCGGTGG+CGG | + | chr3.1:60159785-60159804 | MS.gene30749:CDS | 65.0% | |
TTTACCGTGGAACGCCGCGC+CGG | + | chr3.1:60159499-60159518 | MS.gene30749:CDS | 65.0% | |
! | GTTGTCTCCGGTGGCGGTTG+CGG | + | chr3.1:60159791-60159810 | MS.gene30749:CDS | 65.0% |
!! | AATCGGAGTAGCGCCGGTGG+CGG | + | chr3.1:60159654-60159673 | MS.gene30749:CDS | 65.0% |
!! | GGCGTTTTCGAGGCACGGGA+AGG | + | chr3.1:60159764-60159783 | MS.gene30749:CDS | 65.0% |
AATGCCGGCGCGGCGTTCCA+CGG | - | chr3.1:60159506-60159525 | None:intergenic | 70.0% | |
CTGCTGGCATGCAGGGAGCC+AGG | + | chr3.1:60161284-60161303 | MS.gene30749:CDS | 70.0% | |
CTGGCTCCCTGCATGCCAGC+AGG | - | chr3.1:60161286-60161305 | None:intergenic | 70.0% | |
GGCGGCGGAAATGGCAGCAC+AGG | + | chr3.1:60159815-60159834 | MS.gene30749:CDS | 70.0% | |
GGTTGCGGAGGCGGCGGAAA+TGG | + | chr3.1:60159806-60159825 | MS.gene30749:CDS | 70.0% | |
GTGGGTCAGCCCTTGGCAGG+TGG | + | chr3.1:60161096-60161115 | MS.gene30749:CDS | 70.0% | |
! | CCGAATCGGAGTAGCGCCGG+TGG | + | chr3.1:60159651-60159670 | MS.gene30749:CDS | 70.0% |
! | GTCTCCGGTGGCGGTTGCGG+AGG | + | chr3.1:60159794-60159813 | MS.gene30749:CDS | 75.0% |
! | TCCGGTGGCGGTTGCGGAGG+CGG | + | chr3.1:60159797-60159816 | MS.gene30749:CDS | 75.0% |
! | GCCGCCTCCGCAACCGCCAC+CGG | - | chr3.1:60159801-60159820 | None:intergenic | 80.0% |
!! | GGTGGCGGTTGCGGAGGCGG+CGG | + | chr3.1:60159800-60159819 | MS.gene30749:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 60158985 | 60161756 | 60158985 | ID=MS.gene30749 |
chr3.1 | mRNA | 60158985 | 60161756 | 60158985 | ID=MS.gene30749.t1;Parent=MS.gene30749 |
chr3.1 | exon | 60158985 | 60160067 | 60158985 | ID=MS.gene30749.t1.exon1;Parent=MS.gene30749.t1 |
chr3.1 | CDS | 60158985 | 60160067 | 60158985 | ID=cds.MS.gene30749.t1;Parent=MS.gene30749.t1 |
chr3.1 | exon | 60161058 | 60161756 | 60161058 | ID=MS.gene30749.t1.exon2;Parent=MS.gene30749.t1 |
chr3.1 | CDS | 60161058 | 60161756 | 60161058 | ID=cds.MS.gene30749.t1;Parent=MS.gene30749.t1 |
Gene Sequence |
Protein sequence |