AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene68637

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68637.t1 MTR_2g094570 82.546 699 17 8 1 594 57 755 0.0 1120
MS.gene68637.t1 MTR_2g094570 82.546 699 17 8 1 594 1 699 0.0 1119
MS.gene68637.t1 MTR_2g094570 81.011 653 19 8 1 548 1 653 0.0 1021
MS.gene68637.t1 MTR_4g058930 61.798 712 140 16 1 594 1 698 0.0 761
MS.gene68637.t1 MTR_4g058930 61.606 685 131 16 1 567 1 671 0.0 727
MS.gene68637.t1 MTR_1g064430 51.391 683 196 18 2 561 31 700 0.0 610
MS.gene68637.t1 MTR_1g064430 51.245 683 197 17 2 561 18 687 0.0 610
MS.gene68637.t1 MTR_1g094960 50.980 561 157 12 2 445 10 569 7.13e-165 484
MS.gene68637.t1 MTR_7g101280 42.308 676 214 21 1 566 21 630 1.03e-148 444
MS.gene68637.t1 MTR_0041s0110 42.308 676 214 21 1 566 21 630 1.03e-148 444
MS.gene68637.t1 MTR_7g101275 48.338 331 87 8 20 291 1 306 1.28e-89 283
MS.gene68637.t1 MTR_3g073420 37.218 532 232 14 7 440 15 542 1.78e-89 288
MS.gene68637.t1 MTR_0041s0120 46.483 327 111 8 20 291 1 318 2.75e-82 264
MS.gene68637.t1 MTR_5g061220 36.695 466 175 15 11 385 19 455 8.99e-75 248
MS.gene68637.t1 MTR_2g024430 36.154 390 138 12 8 330 17 362 5.51e-66 224
MS.gene68637.t1 MTR_5g040880 34.715 386 157 9 1 327 1 350 2.09e-64 220
MS.gene68637.t1 MTR_4g124900 35.385 390 169 10 6 337 18 382 1.38e-60 218
MS.gene68637.t1 MTR_4g124900 35.385 390 169 10 6 337 18 382 1.40e-60 218
MS.gene68637.t1 MTR_2g014770 34.367 387 165 9 11 329 53 418 4.75e-60 211
MS.gene68637.t1 MTR_2g014770 34.367 387 165 9 11 329 53 418 1.72e-59 210
MS.gene68637.t1 MTR_4g088210 36.043 369 147 10 4 306 31 376 1.97e-59 211
MS.gene68637.t1 MTR_4g088210 36.043 369 147 10 4 306 31 376 2.28e-59 211
MS.gene68637.t1 MTR_5g082140 32.957 443 188 13 6 375 7 413 5.82e-59 204
MS.gene68637.t1 MTR_8g100050 35.340 382 166 8 2 325 50 408 1.88e-58 208
MS.gene68637.t1 MTR_2g018690 36.709 395 164 12 2 335 13 382 2.54e-58 210
MS.gene68637.t1 MTR_5g076270 36.761 389 159 11 5 332 18 380 3.24e-58 209
MS.gene68637.t1 MTR_8g100050 35.340 382 166 8 2 325 50 408 6.60e-58 208
MS.gene68637.t1 MTR_8g079492 36.041 394 167 12 2 335 13 381 6.71e-57 206
MS.gene68637.t1 MTR_8g079492 36.041 394 167 12 2 335 13 381 7.23e-57 206
MS.gene68637.t1 MTR_1g058210 32.732 388 171 10 6 334 7 363 3.19e-56 196
MS.gene68637.t1 MTR_3g064050 35.990 389 162 11 5 332 20 382 4.14e-56 203
MS.gene68637.t1 MTR_2g043250 35.457 361 154 8 6 308 18 357 5.88e-56 204
MS.gene68637.t1 MTR_4g021580 35.864 382 155 12 9 327 17 371 2.73e-55 197
MS.gene68637.t1 MTR_4g021580 35.864 382 155 12 9 327 17 371 3.80e-55 198
MS.gene68637.t1 MTR_2g093740 35.115 393 165 11 11 335 56 426 6.12e-55 198
MS.gene68637.t1 MTR_2g093740 35.115 393 165 11 11 335 56 426 1.78e-54 197
MS.gene68637.t1 MTR_2g093740 35.115 393 165 11 11 335 56 426 2.17e-54 198
MS.gene68637.t1 MTR_1g024025 36.842 361 146 10 6 306 38 376 3.91e-54 199
MS.gene68637.t1 MTR_8g101360 36.740 362 148 8 8 309 28 368 1.49e-53 197
MS.gene68637.t1 MTR_2g006270 31.991 422 179 13 10 366 12 390 4.46e-53 188
MS.gene68637.t1 MTR_2g093740 33.990 406 165 11 11 335 56 439 5.60e-53 193
MS.gene68637.t1 MTR_5g040740 34.561 353 130 10 8 296 9 324 1.51e-52 185
MS.gene68637.t1 MTR_2g093740 33.990 406 165 11 11 335 56 439 1.60e-52 192
MS.gene68637.t1 MTR_2g093740 33.990 406 165 11 11 335 56 439 1.81e-52 192
MS.gene68637.t1 MTR_2g005240 37.430 358 143 11 11 309 23 358 5.58e-52 189
MS.gene68637.t1 MTR_4g060460 35.246 366 144 10 11 306 54 396 1.43e-51 190
MS.gene68637.t1 MTR_4g060460 35.246 366 144 10 11 306 54 396 1.62e-51 189
MS.gene68637.t1 MTR_8g027440 29.456 662 298 25 11 557 29 636 3.40e-51 187
MS.gene68637.t1 MTR_7g062540 33.590 390 175 10 5 334 8 373 1.01e-50 186
MS.gene68637.t1 MTR_2g093740 38.636 308 145 9 50 335 11 296 8.59e-48 177
MS.gene68637.t1 MTR_2g093740 38.636 308 145 9 50 335 11 296 1.15e-47 177
MS.gene68637.t1 MTR_8g079492 37.700 313 150 9 43 335 12 299 1.55e-47 179
MS.gene68637.t1 MTR_2g006380 30.751 426 176 15 8 366 17 390 4.94e-47 171
MS.gene68637.t1 MTR_2g093740 37.072 321 145 9 50 335 11 309 8.07e-46 171
MS.gene68637.t1 MTR_2g093740 37.072 321 145 9 50 335 11 309 9.98e-46 172
MS.gene68637.t1 MTR_5g060780 31.653 357 158 11 8 307 9 336 8.19e-40 150
MS.gene68637.t1 MTR_5g061890 31.933 357 157 11 8 307 9 336 2.69e-39 149
MS.gene68637.t1 MTR_5g460920 30.812 357 161 10 8 307 9 336 1.20e-38 147
MS.gene68637.t1 MTR_8g446900 29.605 304 170 7 45 329 34 312 2.81e-34 134
MS.gene68637.t1 MTR_5g060630 34.307 274 130 11 56 307 126 371 2.23e-31 128
MS.gene68637.t1 MTR_5g460740 34.307 274 130 11 56 307 126 371 2.23e-31 128
MS.gene68637.t1 MTR_5g062970 33.503 197 76 4 11 152 38 234 4.49e-28 113
MS.gene68637.t1 MTR_5g062960 37.079 178 96 6 201 374 2 167 9.19e-23 96.7
MS.gene68637.t1 MTR_3g064050 40.157 127 68 4 208 332 25 145 5.49e-17 85.1
MS.gene68637.t1 MTR_5g032260 38.462 104 62 2 201 303 50 152 1.50e-14 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68637.t1 AT2G28350 49.931 723 200 21 3 594 2 693 0.0 603
MS.gene68637.t1 AT4G30080 50.751 666 210 16 5 564 13 666 0.0 591
MS.gene68637.t1 AT2G28350 49.498 697 190 21 3 568 2 667 0.0 571
MS.gene68637.t1 AT1G77850 35.507 552 242 17 6 454 14 554 1.37e-89 289
MS.gene68637.t1 AT1G77850 35.507 552 242 17 6 454 14 554 1.54e-89 288
MS.gene68637.t1 AT5G62000 36.788 386 157 12 4 325 48 410 1.93e-60 216
MS.gene68637.t1 AT5G62000 36.788 386 157 12 4 325 48 410 2.30e-60 216
MS.gene68637.t1 AT5G62000 36.788 386 157 12 4 325 48 410 2.30e-60 216
MS.gene68637.t1 AT5G62000 36.788 386 157 12 4 325 48 410 2.30e-60 216
MS.gene68637.t1 AT5G62000 36.788 386 157 12 4 325 48 410 2.30e-60 216
MS.gene68637.t1 AT5G37020 37.265 373 149 10 3 313 14 363 1.42e-59 212
MS.gene68637.t1 AT5G37020 37.265 373 149 10 3 313 14 363 3.40e-59 212
MS.gene68637.t1 AT1G19220 34.015 391 175 10 5 337 17 382 1.12e-57 209
MS.gene68637.t1 AT2G33860 34.190 389 171 12 11 336 54 420 4.88e-57 202
MS.gene68637.t1 AT1G59750 28.795 639 319 19 11 557 22 616 4.95e-57 203
MS.gene68637.t1 AT5G60450 35.696 395 155 9 2 325 32 398 9.82e-57 204
MS.gene68637.t1 AT1G59750 28.705 641 319 19 11 557 22 618 1.00e-56 202
MS.gene68637.t1 AT1G59750 28.882 644 317 19 11 557 22 621 1.84e-56 202
MS.gene68637.t1 AT1G59750 28.882 644 317 19 11 557 22 621 1.84e-56 202
MS.gene68637.t1 AT5G60450 36.010 386 148 9 11 325 65 422 2.76e-56 203
MS.gene68637.t1 AT1G30330 36.041 394 166 12 3 335 14 382 1.63e-55 202
MS.gene68637.t1 AT1G19850 36.944 360 144 11 8 306 40 377 2.06e-55 202
MS.gene68637.t1 AT1G19850 36.944 360 144 11 8 306 51 388 2.15e-55 202
MS.gene68637.t1 AT1G30330 35.550 391 167 11 5 335 19 384 2.40e-55 202
MS.gene68637.t1 AT1G30330 35.550 391 167 11 5 335 19 384 2.40e-55 202
MS.gene68637.t1 AT5G20730 33.846 390 175 10 6 337 19 383 3.03e-55 202
MS.gene68637.t1 AT5G20730 33.760 391 175 11 6 337 19 384 6.01e-54 199
MS.gene68637.t1 AT5G20730 33.760 391 175 11 6 337 19 384 6.93e-54 198
MS.gene68637.t1 AT4G23980 35.457 361 146 10 11 310 12 346 5.28e-53 192
MS.gene68637.t1 AT4G23980 35.457 361 146 10 11 310 12 346 5.49e-53 192
MS.gene68637.t1 AT2G46530 35.405 370 144 14 11 321 21 354 1.33e-51 187
MS.gene68637.t1 AT2G46530 35.405 370 144 14 11 321 42 375 2.15e-51 187
MS.gene68637.t1 AT1G35240 28.435 626 292 23 11 557 27 575 3.17e-50 183
MS.gene68637.t1 AT1G34410 28.504 635 294 24 11 557 27 589 1.03e-49 182
MS.gene68637.t1 AT5G37020 41.045 268 113 8 68 313 24 268 3.49e-48 179
MS.gene68637.t1 AT3G61830 34.085 355 150 12 11 306 25 354 6.01e-48 177
MS.gene68637.t1 AT2G33860 38.028 284 133 9 74 336 2 263 1.07e-47 173
MS.gene68637.t1 AT1G34310 27.864 646 284 24 11 557 27 589 2.35e-46 172
MS.gene68637.t1 AT1G34390 28.145 636 307 24 11 564 27 594 3.32e-46 172
MS.gene68637.t1 AT1G35520 28.031 635 297 24 11 557 27 589 5.54e-46 171
MS.gene68637.t1 AT1G35540 27.070 628 311 18 11 557 27 588 2.26e-44 167
MS.gene68637.t1 AT2G46530 37.687 268 112 8 73 321 36 267 5.16e-43 162
MS.gene68637.t1 AT3G61830 37.549 253 114 7 73 306 76 303 1.22e-40 155
MS.gene68637.t1 AT1G34170 30.728 371 159 14 11 320 25 358 7.92e-38 147
MS.gene68637.t1 AT1G34170 24.800 625 254 24 11 557 25 511 1.97e-33 135
MS.gene68637.t1 AT1G34170 28.841 371 140 14 11 320 25 332 8.73e-31 126
MS.gene68637.t1 AT1G43950 36.683 199 69 8 11 155 27 222 3.93e-25 104

Find 122 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATCGTCTCTCGATTATT+TGG 0.140943 2.1:-8680868 None:intergenic
CGCTCCTGCCGCAGGCATTC+AGG 0.178149 2.1:+8680768 MS.gene68637:intron
ATACAACACAAAGGGTTAAA+AGG 0.216528 2.1:-8680724 None:intergenic
TCGAAACCGAAGATTCTTCT+AGG 0.244012 2.1:+8679613 MS.gene68637:CDS
GGGAACTATTTCTTCTGTTC+AGG 0.264499 2.1:+8679650 MS.gene68637:CDS
GTTTCAGATACCAACATTTC+AGG 0.272858 2.1:+8680697 MS.gene68637:CDS
ATGAAAATTCAATGGTGTTC+TGG 0.274692 2.1:+8679570 MS.gene68637:CDS
TTCAATCTCTGAATTTCTTA+AGG 0.283184 2.1:-8678928 None:intergenic
TTGACAATTCTGATGGATTC+AGG 0.309644 2.1:+8681554 MS.gene68637:CDS
TTCCCCTTGGAGACTTCTTC+AGG 0.314727 2.1:+8679698 MS.gene68637:CDS
TTCACATTGTGTAGTAAATC+TGG 0.325303 2.1:-8680548 None:intergenic
AGAAGTCTCCAAGGGGAATT+AGG 0.326359 2.1:-8679693 None:intergenic
TTGAGAGAGGAGAATAAGTT+GGG 0.327890 2.1:+8679405 MS.gene68637:CDS
TGAAGAACTTTATAGAAAAC+TGG 0.335874 2.1:+8681301 MS.gene68637:CDS
TTTGAGAGAGGAGAATAAGT+TGG 0.338801 2.1:+8679404 MS.gene68637:CDS
GCGAAGAGAGGGATTGTTAA+TGG 0.339338 2.1:+8679304 MS.gene68637:CDS
TCAATCTCTGAATTTCTTAA+GGG 0.339968 2.1:-8678927 None:intergenic
GGAGCCAGGCATGCTCAAAT+TGG 0.343033 2.1:+8680790 MS.gene68637:CDS
AGGATGTTCACGGCGAGGTT+TGG 0.354101 2.1:+8679131 MS.gene68637:CDS
ACGGCGAGGTTTGGAAGTTT+AGG 0.366756 2.1:+8679140 MS.gene68637:CDS
TTCTAGGATTAGTTGGTTCA+TGG 0.372148 2.1:+8679629 MS.gene68637:CDS
AATGGATTGGAAACACCTTC+TGG 0.376276 2.1:+8679322 MS.gene68637:CDS
TCAAATTGGAATATCTTTAT+CGG 0.377207 2.1:+8680804 MS.gene68637:CDS
ACTGAAATTTGTTGTTGTTA+AGG 0.379784 2.1:-8680834 None:intergenic
TTTCTTTGCTCTTATTATCA+TGG 0.382194 2.1:-8680915 None:intergenic
ATGTCCATGGTTGGTTGAAT+TGG 0.403356 2.1:+8680577 MS.gene68637:CDS
GAAATGTTGGTATCTGAAAC+TGG 0.405856 2.1:-8680694 None:intergenic
ACCAACACATGACAAATCTA+AGG 0.412661 2.1:-8681273 None:intergenic
AAGATTCTTCTAGGATTAGT+TGG 0.415313 2.1:+8679622 MS.gene68637:CDS
TGCTAGTAATCAAACATTTG+AGG 0.416661 2.1:+8679482 MS.gene68637:CDS
GCTCCTGCCGCAGGCATTCA+GGG 0.419621 2.1:+8680769 MS.gene68637:intron
AGGAGGCATTTGTTAACAAC+TGG 0.420761 2.1:+8679184 MS.gene68637:CDS
ATATCATGTCTGTTGACTAT+AGG 0.423697 2.1:+8680940 MS.gene68637:CDS
ATTAGATACTGGTCATTGTA+AGG 0.424326 2.1:+8681220 MS.gene68637:CDS
TTCAATGGTGTTCTGGGATG+AGG 0.425706 2.1:+8679577 MS.gene68637:CDS
TGAAAATTCAATGGTGTTCT+GGG 0.429213 2.1:+8679571 MS.gene68637:CDS
ATTTGCAGGGTTTGTATCAC+AGG 0.434573 2.1:+8681678 MS.gene68637:intron
GAGAGGGATTGTTAATGGAT+TGG 0.434835 2.1:+8679309 MS.gene68637:CDS
TGGCAACTTGGATTAGATAC+TGG 0.435835 2.1:+8681209 MS.gene68637:CDS
AACAACAACAAATTTCAGTT+AGG 0.435844 2.1:+8680838 MS.gene68637:CDS
ACCTTAGATTTGTCATGTGT+TGG 0.444478 2.1:+8681272 MS.gene68637:CDS
TTCTTCCTTGGTGGTGAGAA+GGG 0.447097 2.1:-8680629 None:intergenic
TTTCTTCCTTGGTGGTGAGA+AGG 0.447588 2.1:-8680630 None:intergenic
CCGCAGGCATTCAGGGAGCC+AGG 0.455283 2.1:+8680776 MS.gene68637:intron
TTCGTTGGCCTAATTCCCCT+TGG 0.456414 2.1:+8679685 MS.gene68637:CDS
TAACCTAATTGCAGGTCACT+TGG 0.458129 2.1:+8680519 MS.gene68637:intron
AAAGCTTAGATCCACAACTA+TGG 0.458962 2.1:+8678698 MS.gene68637:CDS
CAACTATGGCACGCATGTGC+TGG 0.459997 2.1:+8678712 MS.gene68637:CDS
TGTGTTGTTGTCCAAGAAAA+AGG 0.460383 2.1:+8681085 MS.gene68637:CDS
ATTTGTTGCTCAGTGAGAAT+TGG 0.462091 2.1:-8681038 None:intergenic
TTCGCAATCACCGTCTGAAC+CGG 0.462939 2.1:-8679109 None:intergenic
GTACTCTATCGTGATGCAAC+AGG 0.463246 2.1:+8681364 MS.gene68637:CDS
TACAACACAAAGGGTTAAAA+GGG 0.478847 2.1:-8680723 None:intergenic
GTTGTTAACAAATGCCTCCT+TGG 0.484302 2.1:-8679181 None:intergenic
AATCGAGAGACGATTTCTAA+TGG 0.484316 2.1:+8680874 MS.gene68637:CDS
TATTCCAATTTGAGCATGCC+TGG 0.486937 2.1:-8680794 None:intergenic
CAGGCAGCAAAGATACTAGA+AGG 0.487275 2.1:+8681573 MS.gene68637:CDS
AAAAGGGTTGCCTGAAATGT+TGG 0.488726 2.1:-8680707 None:intergenic
TCTAGGATTAGTTGGTTCAT+GGG 0.488794 2.1:+8679630 MS.gene68637:CDS
ACAGGTGCTGTTAAACAAAC+TGG 0.490968 2.1:+8681382 MS.gene68637:CDS
GGGGAATTAGGCCAACGAAT+AGG 0.495789 2.1:-8679681 None:intergenic
ACTAATCCTAGAAGAATCTT+CGG 0.501263 2.1:-8679619 None:intergenic
AAAGTCTTTGCAAAAGATGC+AGG 0.501554 2.1:-8678993 None:intergenic
AAGTTTAGGCATATCTATAG+AGG 0.501773 2.1:+8679154 MS.gene68637:CDS
AATCCGGATGTTGTGGAAAA+CGG 0.502333 2.1:-8680655 None:intergenic
ACAACATCGAGAGGGAAATC+CGG 0.506711 2.1:-8680671 None:intergenic
AAACGGAGTTTCTTCCTTGG+TGG 0.510040 2.1:-8680638 None:intergenic
TCTTAAACAAAGATGCTCAT+AGG 0.516080 2.1:-8681747 None:intergenic
GCATGTTCTGCATGCCCTTG+TGG 0.516128 2.1:-8678781 None:intergenic
GGCATTTGTTAACAACTGGT+TGG 0.516900 2.1:+8679188 MS.gene68637:CDS
AGCACTAGCACTAGTGGTAG+AGG 0.519267 2.1:-8681177 None:intergenic
GGAAAACGGAGTTTCTTCCT+TGG 0.523736 2.1:-8680641 None:intergenic
AGAGGGAAATCCGGATGTTG+TGG 0.540838 2.1:-8680662 None:intergenic
AAACTGGTGAAGAACCCTTC+AGG 0.541832 2.1:+8681398 MS.gene68637:CDS
GTATTCGTCGCGCGAAGAGA+GGG 0.550772 2.1:+8679293 MS.gene68637:CDS
AGGTTGTTGATCCTATTCGT+TGG 0.555272 2.1:+8679670 MS.gene68637:CDS
GGCTGAGCCACCGGTTCAGA+CGG 0.555712 2.1:+8679099 MS.gene68637:intron
TTAGATGCATCAAATAAGAC+AGG 0.558939 2.1:+8681723 MS.gene68637:CDS
GCACATGCGTGCCATAGTTG+TGG 0.562709 2.1:-8678709 None:intergenic
TCTGATGCAAACAATGGTGG+AGG 0.563598 2.1:+8679023 MS.gene68637:CDS
AACCTAATTGCAGGTCACTT+GGG 0.568780 2.1:+8680520 MS.gene68637:intron
GGGTTTGTATCACAGGAACT+AGG 0.573351 2.1:+8681685 MS.gene68637:intron
GTGTTTCTGAGAGGTGAAAG+TGG 0.574136 2.1:+8679256 MS.gene68637:CDS
GATTGGAAACACCTTCTGGA+TGG 0.576113 2.1:+8679326 MS.gene68637:CDS
GCAATCACCGTCTGAACCGG+TGG 0.583092 2.1:-8679106 None:intergenic
TGAGAGAGGAGAATAAGTTG+GGG 0.584787 2.1:+8679406 MS.gene68637:CDS
GTGATTGCGAAGGATGTTCA+CGG 0.589988 2.1:+8679121 MS.gene68637:CDS
GAAGAATCTTCGGTTTCGAA+TGG 0.590530 2.1:-8679609 None:intergenic
GAAGTCTTAATACAAAACTC+AGG 0.592108 2.1:-8679531 None:intergenic
TGAAACTGGACAACATCGAG+AGG 0.594801 2.1:-8680680 None:intergenic
GATACCAATTCAACCAACCA+TGG 0.596253 2.1:-8680581 None:intergenic
GAGAGAGGAGAATAAGTTGG+GGG 0.597200 2.1:+8679407 MS.gene68637:CDS
GCACGCATGTGCTGGAGGAA+TGG 0.600210 2.1:+8678720 MS.gene68637:CDS
TTGTGTCTTGGAGCTTATGG+TGG 0.600673 2.1:+8679366 MS.gene68637:intron
AAAGTCAGCACTAGCACTAG+TGG 0.602500 2.1:-8681183 None:intergenic
AACTCAGGAGTACTTGCTCT+AGG 0.603509 2.1:-8679516 None:intergenic
AAGCTGCTATGAAAATTCAA+TGG 0.604950 2.1:+8679562 MS.gene68637:CDS
GGTATTCGTCGCGCGAAGAG+AGG 0.605126 2.1:+8679292 MS.gene68637:CDS
CTATGGCACGCATGTGCTGG+AGG 0.612975 2.1:+8678715 MS.gene68637:CDS
TTCTTGGAGTCAGAGGATGT+TGG 0.618317 2.1:+8681245 MS.gene68637:CDS
CAATCTGATGCAAACAATGG+TGG 0.622207 2.1:+8679020 MS.gene68637:CDS
TGTACCTGAAGAAGTCTCCA+AGG 0.627522 2.1:-8679702 None:intergenic
ATTGAAAATGATGATTCTGA+TGG 0.633859 2.1:+8678945 MS.gene68637:CDS
GGTTCAGACGGTGATTGCGA+AGG 0.635341 2.1:+8679111 MS.gene68637:CDS
GTACCTGAAGAAGTCTCCAA+GGG 0.636379 2.1:-8679701 None:intergenic
AGTGAGTGGTGAATCAGTGA+AGG 0.641115 2.1:+8679443 MS.gene68637:CDS
AGAGAGGAGAATAAGTTGGG+GGG 0.643897 2.1:+8679408 MS.gene68637:CDS
CTGATGCAAACAATGGTGGA+GGG 0.644135 2.1:+8679024 MS.gene68637:CDS
TGCGAAGGATGTTCACGGCG+AGG 0.644282 2.1:+8679126 MS.gene68637:CDS
AATGATGATTCTGATGGTGA+TGG 0.651505 2.1:+8678951 MS.gene68637:CDS
GGTGGAAGAGTGAAAGTGAG+TGG 0.652214 2.1:+8679429 MS.gene68637:CDS
TTACCAGAACTCCATCCAGA+AGG 0.662357 2.1:-8679337 None:intergenic
GATTCTATTGTGTTTCTGAG+AGG 0.663178 2.1:+8679247 MS.gene68637:CDS
GGAACTAGGAATGCTGAACG+TGG 0.666679 2.1:+8681699 MS.gene68637:CDS
GAAACTGGACAACATCGAGA+GGG 0.676432 2.1:-8680679 None:intergenic
ATGTGAAGCGAGTATGTCCA+TGG 0.680508 2.1:+8680564 MS.gene68637:CDS
GAAGCGAGTATGTCCATGGT+TGG 0.682735 2.1:+8680568 MS.gene68637:CDS
ACACAATCTGATGCAAACAA+TGG 0.698582 2.1:+8679017 MS.gene68637:CDS
TCGCACCCTTCTCACCACCA+AGG 0.717374 2.1:+8680624 MS.gene68637:CDS
TCTATAGAGGAACACCAAGG+AGG 0.745721 2.1:+8679167 MS.gene68637:CDS
TACCTGAAGAAGTCTCCAAG+GGG 0.745887 2.1:-8679700 None:intergenic
ATATCTATAGAGGAACACCA+AGG 0.792807 2.1:+8679164 MS.gene68637:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAAATTGTTAATGAAT+CGG - chr2.1:8679795-8679814 None:intergenic 10.0%
!! TTAATCCATGAATATATTTA+TGG + chr2.1:8680227-8680246 MS.gene68637:intron 15.0%
!!! ATTCCTTTTTTTTTTTTTTG+AGG + chr2.1:8680179-8680198 MS.gene68637:intron 15.0%
!!! TTCCTTTTTTTTTTTTTTGA+GGG + chr2.1:8680180-8680199 MS.gene68637:intron 15.0%
!! ACACTAACTGAAATAATATT+TGG + chr2.1:8680010-8680029 MS.gene68637:intron 20.0%
!! ATTCAATATTTACTAGAAAC+TGG - chr2.1:8679967-8679986 None:intergenic 20.0%
!! CGAAAATATTCATATTCATA+TGG - chr2.1:8681449-8681468 None:intergenic 20.0%
!! TACAACCATAAATATATTCA+TGG - chr2.1:8680235-8680254 None:intergenic 20.0%
!! TATGTATAATGTATAACCAA+TGG + chr2.1:8679923-8679942 MS.gene68637:intron 20.0%
!! TCAAATTGGAATATCTTTAT+CGG + chr2.1:8680804-8680823 MS.gene68637:CDS 20.0%
!!! ATGTAAAATACTCTTGTTTA+TGG + chr2.1:8680082-8680101 MS.gene68637:intron 20.0%
! AAAAAGATTGACAATTCTGA+TGG + chr2.1:8681547-8681566 MS.gene68637:CDS 25.0%
! AAAATACTTCATCAGTTTCA+GGG - chr2.1:8678890-8678909 None:intergenic 25.0%
! AAACAAGAAAAATACCTGAA+GGG - chr2.1:8681415-8681434 None:intergenic 25.0%
! AACAACAACAAATTTCAGTT+AGG + chr2.1:8680838-8680857 MS.gene68637:CDS 25.0%
! AAGAAGATATACAACACAAA+GGG - chr2.1:8680735-8680754 None:intergenic 25.0%
! AGGGAGTAAAATAAAATTCT+TGG + chr2.1:8680199-8680218 MS.gene68637:intron 25.0%
! ATTGAAAATGATGATTCTGA+TGG + chr2.1:8678945-8678964 MS.gene68637:CDS 25.0%
! CTCCCTCAAAAAAAAAAAAA+AGG - chr2.1:8680185-8680204 None:intergenic 25.0%
! TCAATCTCTGAATTTCTTAA+GGG - chr2.1:8678930-8678949 None:intergenic 25.0%
! TGAAGAACTTTATAGAAAAC+TGG + chr2.1:8681301-8681320 MS.gene68637:CDS 25.0%
! TTCAATCTCTGAATTTCTTA+AGG - chr2.1:8678931-8678950 None:intergenic 25.0%
! TTTCTTTGCTCTTATTATCA+TGG - chr2.1:8680918-8680937 None:intergenic 25.0%
! TTTGTGTTGTATATCTTCTT+CGG + chr2.1:8680735-8680754 MS.gene68637:intron 25.0%
!! CGTTTATATTTAAGACTAGA+TGG + chr2.1:8680392-8680411 MS.gene68637:intron 25.0%
!! TACGTAAACTTTTACATTGT+CGG + chr2.1:8681491-8681510 MS.gene68637:intron 25.0%
!! TTTTTGTGGAATTATTTGCA+GGG + chr2.1:8681665-8681684 MS.gene68637:intron 25.0%
!!! AAAGACTCTTTTTTAGAGTT+TGG + chr2.1:8679880-8679899 MS.gene68637:intron 25.0%
!!! ACTGAAATTTGTTGTTGTTA+AGG - chr2.1:8680837-8680856 None:intergenic 25.0%
!!! AGGTACTAAACATTTTTTTG+TGG + chr2.1:8681651-8681670 MS.gene68637:intron 25.0%
!!! ATTTTCAAGCTGTTTTGTTA+AGG + chr2.1:8679840-8679859 MS.gene68637:intron 25.0%
!!! TTTTTTGTGGAATTATTTGC+AGG + chr2.1:8681664-8681683 MS.gene68637:intron 25.0%
AACAACCTTGATTGAACTTA+TGG + chr2.1:8680493-8680512 MS.gene68637:intron 30.0%
AAGCTGCTATGAAAATTCAA+TGG + chr2.1:8679562-8679581 MS.gene68637:CDS 30.0%
AAGTTTAGGCATATCTATAG+AGG + chr2.1:8679154-8679173 MS.gene68637:CDS 30.0%
ACTAATCCTAGAAGAATCTT+CGG - chr2.1:8679622-8679641 None:intergenic 30.0%
AGCAAACATGGATAAGTATT+TGG + chr2.1:8680339-8680358 MS.gene68637:intron 30.0%
ATACAACACAAAGGGTTAAA+AGG - chr2.1:8680727-8680746 None:intergenic 30.0%
ATGAAAATTCAATGGTGTTC+TGG + chr2.1:8679570-8679589 MS.gene68637:CDS 30.0%
ATTAGATACTGGTCATTGTA+AGG + chr2.1:8681220-8681239 MS.gene68637:CDS 30.0%
CATATTCATGAATTAAGCCT+TGG - chr2.1:8680065-8680084 None:intergenic 30.0%
CCAAAACAAATTCCAAACAT+AGG - chr2.1:8679753-8679772 None:intergenic 30.0%
GAAAATACTTCATCAGTTTC+AGG - chr2.1:8678891-8678910 None:intergenic 30.0%
GAAACAAGAAAAATACCTGA+AGG - chr2.1:8681416-8681435 None:intergenic 30.0%
GAAGAAGATATACAACACAA+AGG - chr2.1:8680736-8680755 None:intergenic 30.0%
GAAGTCTTAATACAAAACTC+AGG - chr2.1:8679534-8679553 None:intergenic 30.0%
GGTTTGTATATAAGCAAACA+TGG + chr2.1:8680327-8680346 MS.gene68637:intron 30.0%
GTTGACCAAAAAGCAAAAAT+TGG - chr2.1:8681019-8681038 None:intergenic 30.0%
TACAACACAAAGGGTTAAAA+GGG - chr2.1:8680726-8680745 None:intergenic 30.0%
TATTGCCATAAGTTCAATCA+AGG - chr2.1:8680501-8680520 None:intergenic 30.0%
TGAAAATTCAATGGTGTTCT+GGG + chr2.1:8679571-8679590 MS.gene68637:CDS 30.0%
TGCTAGTAATCAAACATTTG+AGG + chr2.1:8679482-8679501 MS.gene68637:CDS 30.0%
TTAGATGCATCAAATAAGAC+AGG + chr2.1:8681723-8681742 MS.gene68637:CDS 30.0%
TTCACATTGTGTAGTAAATC+TGG - chr2.1:8680551-8680570 None:intergenic 30.0%
! AAGTGTTTTACTTTCCACAA+GGG + chr2.1:8678767-8678786 MS.gene68637:CDS 30.0%
! AATATTTGGTAGTTACCTAC+CGG + chr2.1:8680024-8680043 MS.gene68637:intron 30.0%
! ATATCATGTCTGTTGACTAT+AGG + chr2.1:8680940-8680959 MS.gene68637:CDS 30.0%
! TCTTATTTCAAACAAGCGAA+TGG + chr2.1:8680123-8680142 MS.gene68637:intron 30.0%
!! AAAGTGTTTTACTTTCCACA+AGG + chr2.1:8678766-8678785 MS.gene68637:CDS 30.0%
!! AAGATTCTTCTAGGATTAGT+TGG + chr2.1:8679622-8679641 MS.gene68637:CDS 30.0%
!! AGACACCAATTTTTGCTTTT+TGG + chr2.1:8681011-8681030 MS.gene68637:CDS 30.0%
!! CCTAATGTTTGTTGTTTACT+CGG + chr2.1:8680305-8680324 MS.gene68637:intron 30.0%
!! CCTATGTTTGGAATTTGTTT+TGG + chr2.1:8679750-8679769 MS.gene68637:intron 30.0%
!! CTAATGTTTGTTGTTTACTC+GGG + chr2.1:8680306-8680325 MS.gene68637:intron 30.0%
!!! TTTTTCTGCTTTTTTGAGAG+AGG + chr2.1:8679392-8679411 MS.gene68637:CDS 30.0%
AAAGCTTAGATCCACAACTA+TGG + chr2.1:8678698-8678717 MS.gene68637:CDS 35.0%
AAAGTCTTTGCAAAAGATGC+AGG - chr2.1:8678996-8679015 None:intergenic 35.0%
AAATTGTGTCTTGGAGCTTA+TGG + chr2.1:8679363-8679382 MS.gene68637:intron 35.0%
AAGCATTTGAGCAAAACCAT+TGG - chr2.1:8679942-8679961 None:intergenic 35.0%
AATCGAGAGACGATTTCTAA+TGG + chr2.1:8680874-8680893 MS.gene68637:CDS 35.0%
ACACAATCTGATGCAAACAA+TGG + chr2.1:8679017-8679036 MS.gene68637:CDS 35.0%
ACCAACACATGACAAATCTA+AGG - chr2.1:8681276-8681295 None:intergenic 35.0%
ACCTTAGATTTGTCATGTGT+TGG + chr2.1:8681272-8681291 MS.gene68637:CDS 35.0%
AGAAAAAGGACAAAGAGAAG+TGG + chr2.1:8681099-8681118 MS.gene68637:CDS 35.0%
AGAATCTCCAAAATCAACGT+TGG - chr2.1:8678812-8678831 None:intergenic 35.0%
ATATCTATAGAGGAACACCA+AGG + chr2.1:8679164-8679183 MS.gene68637:CDS 35.0%
CCGAGTAAACAACAAACATT+AGG - chr2.1:8680308-8680327 None:intergenic 35.0%
GAAATCGTCTCTCGATTATT+TGG - chr2.1:8680871-8680890 None:intergenic 35.0%
GAAATTCTCACAAGAGAGTT+TGG + chr2.1:8680962-8680981 MS.gene68637:intron 35.0%
GATCAAATTGAGCTCAACTA+AGG - chr2.1:8680449-8680468 None:intergenic 35.0%
GTGTCTTTAGATGTGTATGA+AGG + chr2.1:8681631-8681650 MS.gene68637:intron 35.0%
GTTTCAGATACCAACATTTC+AGG + chr2.1:8680697-8680716 MS.gene68637:CDS 35.0%
TAGAAAACTGGCTAAGATGT+TGG + chr2.1:8681313-8681332 MS.gene68637:intron 35.0%
TATGGCAATAACCTAATTGC+AGG + chr2.1:8680511-8680530 MS.gene68637:intron 35.0%
TTCAGTTAGTGTTCGAACTT+AGG - chr2.1:8680002-8680021 None:intergenic 35.0%
TTGAGAGAGGAGAATAAGTT+GGG + chr2.1:8679405-8679424 MS.gene68637:CDS 35.0%
TTTGAGAGAGGAGAATAAGT+TGG + chr2.1:8679404-8679423 MS.gene68637:CDS 35.0%
! AACACTTTTGTGTTCACTGA+TGG - chr2.1:8678754-8678773 None:intergenic 35.0%
! AATGATGATTCTGATGGTGA+TGG + chr2.1:8678951-8678970 MS.gene68637:CDS 35.0%
! ATTTGTTGCTCAGTGAGAAT+TGG - chr2.1:8681041-8681060 None:intergenic 35.0%
! CTTCTCTTTGTCCTTTTTCT+TGG - chr2.1:8681099-8681118 None:intergenic 35.0%
! GAAAGTGGAGAACTTTTTGT+TGG + chr2.1:8679271-8679290 MS.gene68637:CDS 35.0%
! GAAATGTTGGTATCTGAAAC+TGG - chr2.1:8680697-8680716 None:intergenic 35.0%
! GATTCTATTGTGTTTCTGAG+AGG + chr2.1:8679247-8679266 MS.gene68637:CDS 35.0%
! TGGTCATTGTAAGGTTTTCT+TGG + chr2.1:8681229-8681248 MS.gene68637:CDS 35.0%
! TGTGTTGTTGTCCAAGAAAA+AGG + chr2.1:8681085-8681104 MS.gene68637:CDS 35.0%
!! AATCAGAAAAAGCTTGTTGC+AGG + chr2.1:8679223-8679242 MS.gene68637:CDS 35.0%
!! TCTAGGATTAGTTGGTTCAT+GGG + chr2.1:8679630-8679649 MS.gene68637:CDS 35.0%
!! TGGTAATGGAAATTGTGTCT+TGG + chr2.1:8679354-8679373 MS.gene68637:intron 35.0%
!! TTCTAGGATTAGTTGGTTCA+TGG + chr2.1:8679629-8679648 MS.gene68637:CDS 35.0%
!! TTGACAATTCTGATGGATTC+AGG + chr2.1:8681554-8681573 MS.gene68637:CDS 35.0%
!!! TGTTTTGGAGAACATGTTTG+TGG + chr2.1:8679765-8679784 MS.gene68637:intron 35.0%
AAAAGGGTTGCCTGAAATGT+TGG - chr2.1:8680710-8680729 None:intergenic 40.0%
AACCTAATTGCAGGTCACTT+GGG + chr2.1:8680520-8680539 MS.gene68637:intron 40.0%
AATCCGGATGTTGTGGAAAA+CGG - chr2.1:8680658-8680677 None:intergenic 40.0%
AGGTTGTTGATCCTATTCGT+TGG + chr2.1:8679670-8679689 MS.gene68637:CDS 40.0%
ATCGTTTCAGCACAGTATCT+AGG - chr2.1:8679059-8679078 None:intergenic 40.0%
ATTTGCAGGGTTTGTATCAC+AGG + chr2.1:8681678-8681697 MS.gene68637:intron 40.0%
CAATCTGATGCAAACAATGG+TGG + chr2.1:8679020-8679039 MS.gene68637:CDS 40.0%
GAAGAATCTTCGGTTTCGAA+TGG - chr2.1:8679612-8679631 None:intergenic 40.0%
GATACCAATTCAACCAACCA+TGG - chr2.1:8680584-8680603 None:intergenic 40.0%
GTTGTTAACAAATGCCTCCT+TGG - chr2.1:8679184-8679203 None:intergenic 40.0%
TAACCTAATTGCAGGTCACT+TGG + chr2.1:8680519-8680538 MS.gene68637:intron 40.0%
TATTCCAATTTGAGCATGCC+TGG - chr2.1:8680797-8680816 None:intergenic 40.0%
TCGAAACCGAAGATTCTTCT+AGG + chr2.1:8679613-8679632 MS.gene68637:CDS 40.0%
TGAGAGAGGAGAATAAGTTG+GGG + chr2.1:8679406-8679425 MS.gene68637:CDS 40.0%
! ATGTCCATGGTTGGTTGAAT+TGG + chr2.1:8680577-8680596 MS.gene68637:CDS 40.0%
! GAGAGGGATTGTTAATGGAT+TGG + chr2.1:8679309-8679328 MS.gene68637:CDS 40.0%
! GGCATTTGTTAACAACTGGT+TGG + chr2.1:8679188-8679207 MS.gene68637:CDS 40.0%
! GGGAACTATTTCTTCTGTTC+AGG + chr2.1:8679650-8679669 MS.gene68637:CDS 40.0%
! TAAGGTTTTCTTGGAGTCAG+AGG + chr2.1:8681238-8681257 MS.gene68637:CDS 40.0%
! TGGCAACTTGGATTAGATAC+TGG + chr2.1:8681209-8681228 MS.gene68637:CDS 40.0%
! TGTGCTGAAACGATTTTCCT+CGG + chr2.1:8679065-8679084 MS.gene68637:intron 40.0%
!! AATGGATTGGAAACACCTTC+TGG + chr2.1:8679322-8679341 MS.gene68637:CDS 40.0%
!! ACAGGTGCTGTTAAACAAAC+TGG + chr2.1:8681382-8681401 MS.gene68637:CDS 40.0%
!! AGGAGGCATTTGTTAACAAC+TGG + chr2.1:8679184-8679203 MS.gene68637:CDS 40.0%
!! TTTTCCTCGGCTTGATTACT+CGG + chr2.1:8679078-8679097 MS.gene68637:intron 40.0%
!!! GCACAATCCAACGTTGATTT+TGG + chr2.1:8678802-8678821 MS.gene68637:intron 40.0%
AAACGGAGTTTCTTCCTTGG+TGG - chr2.1:8680641-8680660 None:intergenic 45.0%
AAACTGGTGAAGAACCCTTC+AGG + chr2.1:8681398-8681417 MS.gene68637:CDS 45.0%
AAAGTCAGCACTAGCACTAG+TGG - chr2.1:8681186-8681205 None:intergenic 45.0%
ACAACATCGAGAGGGAAATC+CGG - chr2.1:8680674-8680693 None:intergenic 45.0%
AGAAGTCTCCAAGGGGAATT+AGG - chr2.1:8679696-8679715 None:intergenic 45.0%
AGTGAGTGGTGAATCAGTGA+AGG + chr2.1:8679443-8679462 MS.gene68637:CDS 45.0%
ATGTGAAGCGAGTATGTCCA+TGG + chr2.1:8680564-8680583 MS.gene68637:CDS 45.0%
CAGGCAGCAAAGATACTAGA+AGG + chr2.1:8681573-8681592 MS.gene68637:CDS 45.0%
CTACTCTCTCGTCCTATGTT+TGG + chr2.1:8679738-8679757 MS.gene68637:intron 45.0%
GAAACTGGACAACATCGAGA+GGG - chr2.1:8680682-8680701 None:intergenic 45.0%
GATTGGAAACACCTTCTGGA+TGG + chr2.1:8679326-8679345 MS.gene68637:CDS 45.0%
GCGAAGAGAGGGATTGTTAA+TGG + chr2.1:8679304-8679323 MS.gene68637:CDS 45.0%
GGAAAACGGAGTTTCTTCCT+TGG - chr2.1:8680644-8680663 None:intergenic 45.0%
GGGTTTGTATCACAGGAACT+AGG + chr2.1:8681685-8681704 MS.gene68637:intron 45.0%
GTACCTGAAGAAGTCTCCAA+GGG - chr2.1:8679704-8679723 None:intergenic 45.0%
GTACTCTATCGTGATGCAAC+AGG + chr2.1:8681364-8681383 MS.gene68637:CDS 45.0%
GTGATTGCGAAGGATGTTCA+CGG + chr2.1:8679121-8679140 MS.gene68637:CDS 45.0%
TACCTGAAGAAGTCTCCAAG+GGG - chr2.1:8679703-8679722 None:intergenic 45.0%
TCTATAGAGGAACACCAAGG+AGG + chr2.1:8679167-8679186 MS.gene68637:CDS 45.0%
TCTGATGCAAACAATGGTGG+AGG + chr2.1:8679023-8679042 MS.gene68637:CDS 45.0%
TGAAACTGGACAACATCGAG+AGG - chr2.1:8680683-8680702 None:intergenic 45.0%
TGTACCTGAAGAAGTCTCCA+AGG - chr2.1:8679705-8679724 None:intergenic 45.0%
TTACCAGAACTCCATCCAGA+AGG - chr2.1:8679340-8679359 None:intergenic 45.0%
TTCTTGGAGTCAGAGGATGT+TGG + chr2.1:8681245-8681264 MS.gene68637:CDS 45.0%
TTGGCTATCAAGAGCTTGAC+CGG - chr2.1:8680046-8680065 None:intergenic 45.0%
TTGTGTCTTGGAGCTTATGG+TGG + chr2.1:8679366-8679385 MS.gene68637:intron 45.0%
! ACTCCGTTTTCCACAACATC+CGG + chr2.1:8680652-8680671 MS.gene68637:CDS 45.0%
! AGAGAGGAGAATAAGTTGGG+GGG + chr2.1:8679408-8679427 MS.gene68637:CDS 45.0%
! CTAGTGGTAGAGGATTTTGC+TGG - chr2.1:8681170-8681189 None:intergenic 45.0%
! CTGATGCAAACAATGGTGGA+GGG + chr2.1:8679024-8679043 MS.gene68637:CDS 45.0%
! GAGAGAGGAGAATAAGTTGG+GGG + chr2.1:8679407-8679426 MS.gene68637:CDS 45.0%
! GTGTTTCTGAGAGGTGAAAG+TGG + chr2.1:8679256-8679275 MS.gene68637:CDS 45.0%
! TCTGGATGGAGTTCTGGTAA+TGG + chr2.1:8679340-8679359 MS.gene68637:intron 45.0%
!! AACTCAGGAGTACTTGCTCT+AGG - chr2.1:8679519-8679538 None:intergenic 45.0%
!! GCTGACTTTTGTTGGCAACT+TGG + chr2.1:8681197-8681216 MS.gene68637:CDS 45.0%
!! TTCAATGGTGTTCTGGGATG+AGG + chr2.1:8679577-8679596 MS.gene68637:CDS 45.0%
!! TTCTTCCTTGGTGGTGAGAA+GGG - chr2.1:8680632-8680651 None:intergenic 45.0%
!! TTTCTTCCTTGGTGGTGAGA+AGG - chr2.1:8680633-8680652 None:intergenic 45.0%
!!! GTGCTAGTGCTGACTTTTGT+TGG + chr2.1:8681189-8681208 MS.gene68637:CDS 45.0%
AATTATAACGCTCCTGCCGC+AGG + chr2.1:8680760-8680779 MS.gene68637:intron 50.0%
ACACCTTCTGGATGGAGTTC+TGG + chr2.1:8679334-8679353 MS.gene68637:intron 50.0%
ACCACTCATCCTCTGTAGAG+TGG + chr2.1:8678842-8678861 MS.gene68637:intron 50.0%
ACGGCGAGGTTTGGAAGTTT+AGG + chr2.1:8679140-8679159 MS.gene68637:CDS 50.0%
ACTCTACAGAGGATGAGTGG+TGG - chr2.1:8678843-8678862 None:intergenic 50.0%
AGAGGGAAATCCGGATGTTG+TGG - chr2.1:8680665-8680684 None:intergenic 50.0%
AGCACTAGCACTAGTGGTAG+AGG - chr2.1:8681180-8681199 None:intergenic 50.0%
CTATCAAGAGCTTGACCGGT+AGG - chr2.1:8680042-8680061 None:intergenic 50.0%
GAAGCGAGTATGTCCATGGT+TGG + chr2.1:8680568-8680587 MS.gene68637:CDS 50.0%
GGAACTAGGAATGCTGAACG+TGG + chr2.1:8681699-8681718 MS.gene68637:CDS 50.0%
GGGGAATTAGGCCAACGAAT+AGG - chr2.1:8679684-8679703 None:intergenic 50.0%
GGTGGAAGAGTGAAAGTGAG+TGG + chr2.1:8679429-8679448 MS.gene68637:CDS 50.0%
GTCCCAAGTGACCTGCAATT+AGG - chr2.1:8680525-8680544 None:intergenic 50.0%
TCACAGAAGCCACTCTACAG+AGG - chr2.1:8678854-8678873 None:intergenic 50.0%
TTCCCCTTGGAGACTTCTTC+AGG + chr2.1:8679698-8679717 MS.gene68637:CDS 50.0%
TTCGCAATCACCGTCTGAAC+CGG - chr2.1:8679112-8679131 None:intergenic 50.0%
! GGTCAAGCTCTTGATAGCCA+AGG + chr2.1:8680045-8680064 MS.gene68637:intron 50.0%
! TTCGTTGGCCTAATTCCCCT+TGG + chr2.1:8679685-8679704 MS.gene68637:CDS 50.0%
AGGATGTTCACGGCGAGGTT+TGG + chr2.1:8679131-8679150 MS.gene68637:CDS 55.0%
CAACTATGGCACGCATGTGC+TGG + chr2.1:8678712-8678731 MS.gene68637:CDS 55.0%
GCACATGCGTGCCATAGTTG+TGG - chr2.1:8678712-8678731 None:intergenic 55.0%
GCATGTTCTGCATGCCCTTG+TGG - chr2.1:8678784-8678803 None:intergenic 55.0%
GCCACTCTACAGAGGATGAG+TGG - chr2.1:8678846-8678865 None:intergenic 55.0%
GGAGCCAGGCATGCTCAAAT+TGG + chr2.1:8680790-8680809 MS.gene68637:CDS 55.0%
GGTTCAGACGGTGATTGCGA+AGG + chr2.1:8679111-8679130 MS.gene68637:CDS 55.0%
GTATTCGTCGCGCGAAGAGA+GGG + chr2.1:8679293-8679312 MS.gene68637:CDS 55.0%
TCAGCCGAGTAATCAAGCCG+AGG - chr2.1:8679085-8679104 None:intergenic 55.0%
TGATTACTCGGCTGAGCCAC+CGG + chr2.1:8679090-8679109 MS.gene68637:intron 55.0%
! GAGGAGAATAAGTTGGGGGG+TGG + chr2.1:8679411-8679430 MS.gene68637:CDS 55.0%
CTATGGCACGCATGTGCTGG+AGG + chr2.1:8678715-8678734 MS.gene68637:CDS 60.0%
GCAATCACCGTCTGAACCGG+TGG - chr2.1:8679109-8679128 None:intergenic 60.0%
GCACGCATGTGCTGGAGGAA+TGG + chr2.1:8678720-8678739 MS.gene68637:CDS 60.0%
GGTATTCGTCGCGCGAAGAG+AGG + chr2.1:8679292-8679311 MS.gene68637:CDS 60.0%
TCGCACCCTTCTCACCACCA+AGG + chr2.1:8680624-8680643 MS.gene68637:CDS 60.0%
TGCGAAGGATGTTCACGGCG+AGG + chr2.1:8679126-8679145 MS.gene68637:CDS 60.0%
CCTGGCTCCCTGAATGCCTG+CGG - chr2.1:8680779-8680798 None:intergenic 65.0%
GCTCCTGCCGCAGGCATTCA+GGG + chr2.1:8680769-8680788 MS.gene68637:intron 65.0%
!! GGCTGAGCCACCGGTTCAGA+CGG + chr2.1:8679099-8679118 MS.gene68637:intron 65.0%
CCGCAGGCATTCAGGGAGCC+AGG + chr2.1:8680776-8680795 MS.gene68637:intron 70.0%
CGCTCCTGCCGCAGGCATTC+AGG + chr2.1:8680768-8680787 MS.gene68637:intron 70.0%
GCTCCCTGAATGCCTGCGGC+AGG - chr2.1:8680775-8680794 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 8678682 8681767 8678682 ID=MS.gene68637
chr2.1 mRNA 8678682 8681767 8678682 ID=MS.gene68637.t1;Parent=MS.gene68637
chr2.1 exon 8678682 8678813 8678682 ID=MS.gene68637.t1.exon1;Parent=MS.gene68637.t1
chr2.1 CDS 8678682 8678813 8678682 ID=cds.MS.gene68637.t1;Parent=MS.gene68637.t1
chr2.1 exon 8678915 8679052 8678915 ID=MS.gene68637.t1.exon2;Parent=MS.gene68637.t1
chr2.1 CDS 8678915 8679052 8678915 ID=cds.MS.gene68637.t1;Parent=MS.gene68637.t1
chr2.1 exon 8679106 8679349 8679106 ID=MS.gene68637.t1.exon3;Parent=MS.gene68637.t1
chr2.1 CDS 8679106 8679349 8679106 ID=cds.MS.gene68637.t1;Parent=MS.gene68637.t1
chr2.1 exon 8679379 8679719 8679379 ID=MS.gene68637.t1.exon4;Parent=MS.gene68637.t1
chr2.1 CDS 8679379 8679719 8679379 ID=cds.MS.gene68637.t1;Parent=MS.gene68637.t1
chr2.1 exon 8680533 8680737 8680533 ID=MS.gene68637.t1.exon5;Parent=MS.gene68637.t1
chr2.1 CDS 8680533 8680737 8680533 ID=cds.MS.gene68637.t1;Parent=MS.gene68637.t1
chr2.1 exon 8680782 8680978 8680782 ID=MS.gene68637.t1.exon6;Parent=MS.gene68637.t1
chr2.1 CDS 8680782 8680978 8680782 ID=cds.MS.gene68637.t1;Parent=MS.gene68637.t1
chr2.1 exon 8681011 8681330 8681011 ID=MS.gene68637.t1.exon7;Parent=MS.gene68637.t1
chr2.1 CDS 8681011 8681330 8681011 ID=cds.MS.gene68637.t1;Parent=MS.gene68637.t1
chr2.1 exon 8681360 8681419 8681360 ID=MS.gene68637.t1.exon8;Parent=MS.gene68637.t1
chr2.1 CDS 8681360 8681419 8681360 ID=cds.MS.gene68637.t1;Parent=MS.gene68637.t1
chr2.1 exon 8681529 8681594 8681529 ID=MS.gene68637.t1.exon9;Parent=MS.gene68637.t1
chr2.1 CDS 8681529 8681594 8681529 ID=cds.MS.gene68637.t1;Parent=MS.gene68637.t1
chr2.1 exon 8681686 8681767 8681686 ID=MS.gene68637.t1.exon10;Parent=MS.gene68637.t1
chr2.1 CDS 8681686 8681767 8681686 ID=cds.MS.gene68637.t1;Parent=MS.gene68637.t1
Gene Sequence

>MS.gene68637

ATGAAAGAAGCTGAGAAAAGCTTAGATCCACAACTATGGCACGCATGTGCTGGAGGAATGGTTCAAATGCCATCAGTGAACACAAAAGTGTTTTACTTTCCACAAGGGCATGCAGAACATGCACAATCCAACGTTGATTTTGGAGATTCTTTAGAATTCCACCACTCATCCTCTGTAGAGTGGCTTCTGTGAAATTCTTAGCTGACCCTGAAACTGATGAAGTATTTTCAAAGATAACTTTGATTCCCTTAAGAAATTCAGAGATTGAAAATGATGATTCTGATGGTGATGGTTCAGAGAATTCAGAAAAGCCTGCATCTTTTGCAAAGACTTTGACACAATCTGATGCAAACAATGGTGGAGGGTTCTCTGTTCCTAGATACTGTGCTGAAACGATTTTCCTCGGCTTGATTACTCGGCTGAGCCACCGGTTCAGACGGTGATTGCGAAGGATGTTCACGGCGAGGTTTGGAAGTTTAGGCATATCTATAGAGGAACACCAAGGAGGCATTTGTTAACAACTGGTTGGAGTAGTTTTGTGAATCAGAAAAAGCTTGTTGCAGGTGATTCTATTGTGTTTCTGAGAGGTGAAAGTGGAGAACTTTTTGTTGGTATTCGTCGCGCGAAGAGAGGGATTGTTAATGGATTGGAAACACCTTCTGGATGGAGTTCTGGTAATGGAAATTGTGTCTTGGAGCTTATGGTGGTGCTTTTTCTGCTTTTTTGAGAGAGGAGAATAAGTTGGGGGGTGGAAGAGTGAAAGTGAGTGGTGAATCAGTGAAGGAAGCTATGAGACTTGCTGCTAGTAATCAAACATTTGAGGTTGTTTATTATCCTAGAGCAAGTACTCCTGAGTTTTGTATTAAGACTTCAGCTGTGAAAGCTGCTATGAAAATTCAATGGTGTTCTGGGATGAGGTTTAAGATGCCATTCGAAACCGAAGATTCTTCTAGGATTAGTTGGTTCATGGGAACTATTTCTTCTGTTCAGGTTGTTGATCCTATTCGTTGGCCTAATTCCCCTTGGAGACTTCTTCAGGTACAACTACTACTGCTACTACTCTCTCGTCCTATGTTTGGAATTTGTTTTGGAGAACATGTTTGTGGTAATCCGATTCATTAACAATTTATTAATAAGTTTCATTTGAATTTTGATGATATTTTCAAGCTGTTTTGTTAAGGTTCATTTCTTTGAATTGAAAGACTCTTTTTTAGAGTTTGGTTATGTTAATATGTGTATAATATGTATAATGTATAACCAATGGTTTTGCTCAAATGCTTAACCAGTTTCTAGTAAATATTGAATTGATCGAGAGTACCTAAGTTCGAACACTAACTGAAATAATATTTGGTAGTTACCTACCGGTCAAGCTCTTGATAGCCAAGGCTTAATTCATGAATATGTAAAATACTCTTGTTTATGGTTGTACTTATCGCTTGTTTCTTATTTCAAACAAGCGAATGGTTAAAACAAAACAAAAAAATTATGTAAAATAAAATTCCTTTTTTTTTTTTTTGAGGGAGTAAAATAAAATTCTTGGAGCTCTTAATCCATGAATATATTTATGGTTGTACTTATAGCTTGTTTCTATGTAAAAATACTCTTGTTCTAGAGTTTGAAATGCCTAATGTTTGTTGTTTACTCGGGTTTGTATATAAGCAAACATGGATAAGTATTTGGTCTAATATAGACGAAATGTATTTATTTTATCGTTTATATTTAAGACTAGATGGAATTTCATTCGATGATTTGATTGTATGCAAACCTTAGTTGAGCTCAATTTGATCATAAAAAAATGCTTGTCATGCAAAAACAACCTTGATTGAACTTATGGCAATAACCTAATTGCAGGTCACTTGGGACGAACCAGATTTACTACACAATGTGAAGCGAGTATGTCCATGGTTGGTTGAATTGGTATCAAACATGTCGATGATTCATCTCGCACCCTTCTCACCACCAAGGAAGAAACTCCGTTTTCCACAACATCCGGATTTCCCTCTCGATGTTGTCCAGTTTCAGATACCAACATTTCAGGCAACCCTTTTAACCCTTTGTGTTGTATATCTTCTTCGGATAATTATAACGCTCCTGCCGCAGGCATTCAGGGAGCCAGGCATGCTCAAATTGGAATATCTTTATCGGATCTTCACCTTAACAACAACAAATTTCAGTTAGGTGTGTTTCCAAATAATCGAGAGACGATTTCTAATGGTAGCAACATAACTACGAACCATGATAATAAGAGCAAAGAAAGTATATCATGTCTGTTGACTATAGGAAATTCTCACAAGAGAGTTTGGAGATCAAATCTGATAATAATGATAAGAGACACCAATTTTTGCTTTTTGGTCAACCAATTCTCACTGAGCAACAAATCTCTAGAAAATCTTCTAGTGATGATGTGTTGTTGTCCAAGAAAAAGGACAAAGAGAAGTGGTTTTTCAGTGATACTACTAAATCTTCTATTTCTGAACAGTTTTCACCAGCAAAATCCTCTACCACTAGTGCTAGTGCTGACTTTTGTTGGCAACTTGGATTAGATACTGGTCATTGTAAGGTTTTCTTGGAGTCAGAGGATGTTGGAAGAACCTTAGATTTGTCATGTGTTGGTTCTTATGAAGAACTTTATAGAAAACTGGCTAAGATGTTGGAATAGAAAGATCTGAGATGTTGAGTCGTGTACTCTATCGTGATGCAACAGGTGCTGTTAAACAAACTGGTGAAGAACCCTTCAGGTATTTTTCTTGTTTCATCTTTTTATCCATATGAATATGAATATTTTCGAGTTTAATTTATATGCATCGTCTACGTAAACTTTTACATTGTCGGTTAATTACATTGCAGTGACTTCATGAAGACAGCAAAAAGATTGACAATTCTGATGGATTCAGGCAGCAAAGATACTAGAAGGTATGATAAAAAAAAAACATTGTTATATTAATTACAGTGTCTTTAGATGTGTATGAAGGTACTAAACATTTTTTTGTGGAATTATTTGCAGGGTTTGTATCACAGGAACTAGGAATGCTGAACGTGGATTAGATGCATCAAATAAGACAGGACCTATGAGCATCTTTGTTTAA
Protein sequence

>MS.gene68637.t1

MKEAEKSLDPQLWHACAGGMVQMPSVNTKVFYFPQGHAEHAQSNITLIPLRNSEIENDDSDGDGSENSEKPASFAKTLTQSDANNGGGFSPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFLRGESGELFVGIRRAKRGIVNGLETPSGWTYGGAFSAFLREENKLGGGRVKVSGESVKEAMRLAASNQTFEVVYYPRASTPEFCIKTSAVKAAMKIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVVDPIRWPNSPWRLLQVTWDEPDLLHNVKRVCPWLVELVSNMSMIHLAPFSPPRKKLRFPQHPDFPLDVVQFQIPTFQATLLTLCIQGARHAQIGISLSDLHLNNNKFQLGVFPNNRETISNGSNITTNHDNKSKESISCLLTIGNSHKRRHQFLLFGQPILTEQQISRKSSSDDVLLSKKKDKEKWFFSDTTKSSISEQFSPAKSSTTSASADFCWQLGLDTGHCKVFLESEDVGRTLDLSCVGSYEELYRKLAKIRVLYRDATGAVKQTGEEPFSDFMKTAKRLTILMDSGSKDTRRVCITGTRNAERGLDASNKTGPMSIFV