Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32283.t1 | XP_013445459.1 | 99.4 | 316 | 2 | 0 | 4 | 319 | 68 | 383 | 1.20E-173 | 619 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32283.t1 | Q39199 | 88.0 | 316 | 38 | 0 | 4 | 319 | 84 | 399 | 6.3e-158 | 558.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32283.t1 | A0A072U131 | 99.4 | 316 | 2 | 0 | 4 | 319 | 68 | 383 | 9.0e-174 | 619.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051983 | MS.gene32283 | 0.801227 | 9.94E-49 | -1.69E-46 |
| MS.gene052011 | MS.gene32283 | -0.805577 | 1.25E-49 | -1.69E-46 |
| MS.gene055604 | MS.gene32283 | 0.8015 | 8.74E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene32283 | 0.801857 | 7.39E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene32283 | 0.805399 | 1.36E-49 | -1.69E-46 |
| MS.gene058142 | MS.gene32283 | 0.804758 | 1.85E-49 | -1.69E-46 |
| MS.gene058710 | MS.gene32283 | 0.830137 | 3.48E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene32283 | 0.809935 | 1.48E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene32283 | 0.800982 | 1.12E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32283.t1 | MTR_8g461220 | 99.367 | 316 | 2 | 0 | 4 | 319 | 68 | 383 | 0.0 | 642 |
| MS.gene32283.t1 | MTR_4g126040 | 51.235 | 324 | 148 | 7 | 2 | 318 | 54 | 374 | 3.05e-94 | 286 |
| MS.gene32283.t1 | MTR_2g039670 | 51.178 | 297 | 136 | 6 | 2 | 291 | 60 | 354 | 3.56e-94 | 286 |
| MS.gene32283.t1 | MTR_7g090880 | 37.812 | 320 | 186 | 9 | 6 | 317 | 68 | 382 | 3.46e-55 | 184 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32283.t1 | AT1G79050 | 87.188 | 320 | 41 | 0 | 4 | 323 | 84 | 403 | 0.0 | 578 |
| MS.gene32283.t1 | AT1G79050 | 92.126 | 254 | 20 | 0 | 4 | 257 | 84 | 337 | 1.28e-171 | 480 |
| MS.gene32283.t1 | AT2G19490 | 49.846 | 325 | 153 | 7 | 2 | 319 | 55 | 376 | 3.41e-93 | 284 |
| MS.gene32283.t1 | AT3G10140 | 39.432 | 317 | 184 | 5 | 6 | 317 | 65 | 378 | 8.49e-57 | 189 |
| MS.gene32283.t1 | AT3G32920 | 50.495 | 202 | 79 | 5 | 34 | 234 | 12 | 193 | 6.77e-50 | 166 |
| MS.gene32283.t1 | AT3G32920 | 49.398 | 166 | 68 | 3 | 34 | 198 | 12 | 162 | 3.82e-40 | 139 |
| MS.gene32283.t1 | AT3G32920 | 50.360 | 139 | 53 | 3 | 34 | 171 | 12 | 135 | 4.73e-31 | 116 |
| MS.gene32283.t1 | AT3G32920 | 50.360 | 139 | 53 | 3 | 34 | 171 | 12 | 135 | 4.73e-31 | 116 |
| MS.gene32283.t1 | AT3G32920 | 52.703 | 74 | 35 | 0 | 98 | 171 | 9 | 82 | 4.85e-14 | 68.9 |
Find 78 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGGTCTTCCCACTGCTTTC+TGG | 0.112610 | 8.3:-48956758 | None:intergenic |
| GCACTCTTACACGAACTTTA+AGG | 0.157262 | 8.3:-48957929 | None:intergenic |
| CAAGTACCTTATATCTTATT+TGG | 0.167718 | 8.3:-48957458 | None:intergenic |
| TATATCTGTTTCCAGATATT+TGG | 0.171997 | 8.3:+48956734 | MS.gene32283:intron |
| TTGTAGATTGGTGTCTATTA+TGG | 0.178441 | 8.3:+48957604 | MS.gene32283:intron |
| ATTCCACCACTTGTCACTTC+TGG | 0.258174 | 8.3:-48957631 | None:intergenic |
| ACCTCTACAATTCTTCCTTT+TGG | 0.272094 | 8.3:-48956445 | None:intergenic |
| TTTGAACCAAATAAGATATA+AGG | 0.274444 | 8.3:+48957452 | MS.gene32283:CDS |
| TTGGCTTTAGACTTTGCTTT+AGG | 0.292232 | 8.3:+48956412 | MS.gene32283:CDS |
| CGACTAGAAATTCGTTCTAT+AGG | 0.309774 | 8.3:+48957679 | MS.gene32283:CDS |
| GCCGAATTCGATATTTCATT+TGG | 0.311187 | 8.3:+48959926 | MS.gene32283:CDS |
| GCCAACTTCTTCATCTCCTT+TGG | 0.320234 | 8.3:-48957907 | None:intergenic |
| AAGAGTACAACCAGCTTTAG+AGG | 0.344065 | 8.3:-48957424 | None:intergenic |
| TCCAAATGAAATATCGAATT+CGG | 0.363933 | 8.3:-48959927 | None:intergenic |
| AGGGCTCTTGGTACAGTTAT+GGG | 0.379417 | 8.3:+48960088 | MS.gene32283:CDS |
| TCGAATTCGGCTACTTTGTA+AGG | 0.385241 | 8.3:-48959914 | None:intergenic |
| AATGATATAAAGAGCTCTTT+CGG | 0.397776 | 8.3:+48956161 | MS.gene32283:CDS |
| AATGCAGCAAATGGGATTGC+AGG | 0.404303 | 8.3:+48957359 | MS.gene32283:CDS |
| AGAGATTGGAATGCAGCAAA+TGG | 0.404804 | 8.3:+48957350 | MS.gene32283:CDS |
| GACTAGAAATTCGTTCTATA+GGG | 0.407782 | 8.3:+48957680 | MS.gene32283:CDS |
| AAAAGGTAGTGTTACGAGAT+TGG | 0.413731 | 8.3:+48956184 | MS.gene32283:CDS |
| ATAAATGTATAGGGAGAGAT+TGG | 0.416100 | 8.3:+48957336 | MS.gene32283:intron |
| GTCCACGCAAATGAGATCTA+TGG | 0.418614 | 8.3:-48957192 | None:intergenic |
| AAGGGCTCTTGGTACAGTTA+TGG | 0.419313 | 8.3:+48960087 | MS.gene32283:CDS |
| TTAGACTTTGCTTTAGGTGG+TGG | 0.421314 | 8.3:+48956418 | MS.gene32283:CDS |
| TTTCACTTCAACTTCTGCTC+GGG | 0.422959 | 8.3:-48957234 | None:intergenic |
| CAAAACATTGCAGTACTTGA+AGG | 0.442689 | 8.3:+48960800 | MS.gene32283:CDS |
| ATAAAGAGCTCTTTCGGAAA+AGG | 0.444936 | 8.3:+48956167 | MS.gene32283:CDS |
| CAAGCTTTGCGTAAGATGTC+TGG | 0.449604 | 8.3:+48957396 | MS.gene32283:CDS |
| AAAGGTAGTGTTACGAGATT+GGG | 0.449775 | 8.3:+48956185 | MS.gene32283:CDS |
| GATGAATATTGTCTTAAAGA+AGG | 0.452516 | 8.3:+48960068 | MS.gene32283:CDS |
| TCTATTCCAGCAAAAGGCTC+TGG | 0.457882 | 8.3:+48956127 | MS.gene32283:intron |
| AGAGCCATCTCTCCATGATC+TGG | 0.469294 | 8.3:-48957019 | None:intergenic |
| CTGCAATAGCATGAAGTGCT+AGG | 0.471959 | 8.3:-48956781 | None:intergenic |
| CAGACATCTTACGCAAAGCT+TGG | 0.486162 | 8.3:-48957395 | None:intergenic |
| GTCTAAAGCCAAACATCCAC+TGG | 0.486365 | 8.3:-48956401 | None:intergenic |
| TTGATTTCCGTTTAGGCCAA+AGG | 0.486711 | 8.3:+48957891 | MS.gene32283:intron |
| GCAGATCGTATGTGTAGATC+TGG | 0.491077 | 8.3:+48957167 | MS.gene32283:CDS |
| TTAGGTGGTGGTCTTCCAAA+AGG | 0.491192 | 8.3:+48956430 | MS.gene32283:CDS |
| TCTTCTAGAAGAAGTTGAAA+AGG | 0.492340 | 8.3:+48960833 | MS.gene32283:CDS |
| GCTTTAGACTTTGCTTTAGG+TGG | 0.499082 | 8.3:+48956415 | MS.gene32283:CDS |
| TTGTCTTAAAGAAGGGCTCT+TGG | 0.505194 | 8.3:+48960076 | MS.gene32283:CDS |
| GTTTATGTCATGCAGAAGCT+AGG | 0.506088 | 8.3:+48956902 | MS.gene32283:intron |
| TCATGCTATTGCAGAAGTAC+AGG | 0.512089 | 8.3:+48956790 | MS.gene32283:CDS |
| ATGAATATTGTCTTAAAGAA+GGG | 0.513377 | 8.3:+48960069 | MS.gene32283:CDS |
| ATCGTGTGCCAACCAGATCA+TGG | 0.514896 | 8.3:+48957007 | MS.gene32283:CDS |
| GTTTCACTTCAACTTCTGCT+CGG | 0.516499 | 8.3:-48957235 | None:intergenic |
| TTCGATATTTCATTTGGAGA+GGG | 0.528629 | 8.3:+48959932 | MS.gene32283:CDS |
| GAGATTGGAATGCAGCAAAT+GGG | 0.536381 | 8.3:+48957351 | MS.gene32283:CDS |
| TCTGGAAATGCCTCTAAAGC+TGG | 0.543928 | 8.3:+48957414 | MS.gene32283:CDS |
| GTTACGAGATTGGGCAGTGC+TGG | 0.546984 | 8.3:+48956194 | MS.gene32283:CDS |
| TCGGGGAGTGAGAGCTGAGA+CGG | 0.547108 | 8.3:-48957216 | None:intergenic |
| CGCCATAGATCTCATTTGCG+TGG | 0.560134 | 8.3:+48957190 | MS.gene32283:CDS |
| ATTCGATATTTCATTTGGAG+AGG | 0.562710 | 8.3:+48959931 | MS.gene32283:CDS |
| TGCAATAGCATGAAGTGCTA+GGG | 0.565048 | 8.3:-48956780 | None:intergenic |
| GCCAAAGGAGATGAAGAAGT+TGG | 0.567990 | 8.3:+48957906 | MS.gene32283:CDS |
| CCAACCAGATCATGGAGAGA+TGG | 0.574272 | 8.3:+48957015 | MS.gene32283:CDS |
| CCTACCGCTTTAGAATATGC+TGG | 0.575256 | 8.3:-48956965 | None:intergenic |
| CCATCTCTCCATGATCTGGT+TGG | 0.583917 | 8.3:-48957015 | None:intergenic |
| ACGAGATTGGGCAGTGCTGG+TGG | 0.586767 | 8.3:+48956197 | MS.gene32283:CDS |
| AATCCAGAAGTGACAAGTGG+TGG | 0.590086 | 8.3:+48957628 | MS.gene32283:CDS |
| TTCACTTCAACTTCTGCTCG+GGG | 0.595932 | 8.3:-48957233 | None:intergenic |
| TGGAGAGGGAGTCAATAAGC+TGG | 0.603916 | 8.3:+48959946 | MS.gene32283:CDS |
| CCAGCATATTCTAAAGCGGT+AGG | 0.611416 | 8.3:+48956965 | MS.gene32283:CDS |
| TGTAAGAGTGCAAAAGAGCA+AGG | 0.621297 | 8.3:+48957941 | MS.gene32283:CDS |
| TGATCCAGCATATTCTAAAG+CGG | 0.621566 | 8.3:+48956961 | MS.gene32283:CDS |
| GGTACAGTTATGGGGACCAT+CGG | 0.623884 | 8.3:+48960097 | MS.gene32283:CDS |
| TTCTATAGGGAAGATAAAGT+CGG | 0.627679 | 8.3:+48957693 | MS.gene32283:CDS |
| AATAGCATGAAGTGCTAGGG+TGG | 0.629963 | 8.3:-48956777 | None:intergenic |
| GGGCTCTTGGTACAGTTATG+GGG | 0.632195 | 8.3:+48960089 | MS.gene32283:CDS |
| TCCAAAAGGAAGAATTGTAG+AGG | 0.632337 | 8.3:+48956444 | MS.gene32283:CDS |
| TATTTGGACCAGAAAGCAGT+GGG | 0.635930 | 8.3:+48956750 | MS.gene32283:CDS |
| ATATTCTAAAGCGGTAGGAG+TGG | 0.652399 | 8.3:+48956970 | MS.gene32283:CDS |
| TATGTCATGCAGAAGCTAGG+AGG | 0.653728 | 8.3:+48956905 | MS.gene32283:intron |
| TCTTGAAACAGGTTAGGACA+AGG | 0.674813 | 8.3:+48960771 | MS.gene32283:intron |
| TCTAAAGCCAAACATCCACT+GGG | 0.679556 | 8.3:-48956400 | None:intergenic |
| GGAAATCCAGAAGTGACAAG+TGG | 0.683852 | 8.3:+48957625 | MS.gene32283:CDS |
| ATATTTGGACCAGAAAGCAG+TGG | 0.688023 | 8.3:+48956749 | MS.gene32283:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGAAAATTCAAAATAA+TGG | - | chr8.3:48960014-48960033 | None:intergenic | 10.0% |
| !! | AAAGAGAATAAAAATAATTA+TGG | + | chr8.3:48958309-48958328 | MS.gene32283:intron | 10.0% |
| !! | ATAATAATAACTAAGTATTA+TGG | + | chr8.3:48960980-48960999 | MS.gene32283:intron | 10.0% |
| !! | CAAAAAAAAAAAAAAAGATT+TGG | + | chr8.3:48959556-48959575 | MS.gene32283:intron | 10.0% |
| !! | TAAAATTAGGAAATAAATTA+TGG | + | chr8.3:48958423-48958442 | MS.gene32283:intron | 10.0% |
| !! | TATTATAATCAAAAGATATT+AGG | - | chr8.3:48957836-48957855 | None:intergenic | 10.0% |
| !!! | AATAATAAATACTTTTGAAA+TGG | - | chr8.3:48961269-48961288 | None:intergenic | 10.0% |
| !!! | AATATCTTGATAATATATTA+TGG | + | chr8.3:48961041-48961060 | MS.gene32283:intron | 10.0% |
| !!! | ACTTTTATTATATAATTTAG+GGG | + | chr8.3:48957285-48957304 | MS.gene32283:intron | 10.0% |
| !!! | GTACTTTTATTATATAATTT+AGG | + | chr8.3:48957283-48957302 | MS.gene32283:intron | 10.0% |
| !! | AAATAACCTACTATATTTAT+TGG | - | chr8.3:48956048-48956067 | None:intergenic | 15.0% |
| !! | AATTTATAAAACTTGTAGTA+AGG | + | chr8.3:48958057-48958076 | MS.gene32283:intron | 15.0% |
| !! | ACGATAATTATCAATTTATT+TGG | + | chr8.3:48956849-48956868 | MS.gene32283:intron | 15.0% |
| !! | CTAAGTAAAATAGTAAAATT+AGG | + | chr8.3:48958410-48958429 | MS.gene32283:intron | 15.0% |
| !! | TCAAAATATATAAATCAGTT+TGG | - | chr8.3:48956287-48956306 | None:intergenic | 15.0% |
| !! | TCCTAAATAAATAGAAAATT+AGG | + | chr8.3:48960948-48960967 | MS.gene32283:intron | 15.0% |
| !!! | ATTATTTTGAAAAGACTTTA+GGG | + | chr8.3:48959590-48959609 | MS.gene32283:intron | 15.0% |
| !!! | CTAATTTTACTATTTTACTT+AGG | - | chr8.3:48958412-48958431 | None:intergenic | 15.0% |
| !!! | TATTATTTTGAAAAGACTTT+AGG | + | chr8.3:48959589-48959608 | MS.gene32283:intron | 15.0% |
| !!! | TCCTAATTTTCTATTTATTT+AGG | - | chr8.3:48960952-48960971 | None:intergenic | 15.0% |
| !!! | TTATTTGTTACATTGTTAAT+GGG | + | chr8.3:48956062-48956081 | MS.gene32283:intron | 15.0% |
| !!! | TTTGTCTTAATTTTTTTTTG+TGG | + | chr8.3:48959854-48959873 | MS.gene32283:intron | 15.0% |
| !! | AAACCAAACAAAAATGATAT+TGG | + | chr8.3:48958978-48958997 | MS.gene32283:intron | 20.0% |
| !! | AACAGAATAAAAAAGAAACA+CGG | - | chr8.3:48960652-48960671 | None:intergenic | 20.0% |
| !! | AACCAAACAAAAATGATATT+GGG | + | chr8.3:48958979-48958998 | MS.gene32283:intron | 20.0% |
| !! | ATGAAAAAAAACAACACAAA+AGG | - | chr8.3:48957998-48958017 | None:intergenic | 20.0% |
| !! | ATGAATATTGTCTTAAAGAA+GGG | + | chr8.3:48960069-48960088 | MS.gene32283:CDS | 20.0% |
| !! | ATTGAAGTATAAATAAGTAG+AGG | - | chr8.3:48956694-48956713 | None:intergenic | 20.0% |
| !! | CAATTATGATAATAAATCTG+TGG | + | chr8.3:48960419-48960438 | MS.gene32283:intron | 20.0% |
| !! | CTACTTATTTATACTTCAAT+GGG | + | chr8.3:48956694-48956713 | MS.gene32283:intron | 20.0% |
| !! | GTCTTATATACCTATAAATA+GGG | - | chr8.3:48958382-48958401 | None:intergenic | 20.0% |
| !! | GTCTTGTATATCTATAAATA+GGG | + | chr8.3:48961180-48961199 | MS.gene32283:intron | 20.0% |
| !! | TACAACAATTATATCTGATT+CGG | - | chr8.3:48959828-48959847 | None:intergenic | 20.0% |
| !! | TATAAATCAGTTTATAAGGT+GGG | - | chr8.3:48958115-48958134 | None:intergenic | 20.0% |
| !! | TATAGTATAGTATAGTATCT+TGG | - | chr8.3:48958486-48958505 | None:intergenic | 20.0% |
| !! | TCTACTTATTTATACTTCAA+TGG | + | chr8.3:48956693-48956712 | MS.gene32283:intron | 20.0% |
| !! | TCTTATATACCTATAAATAG+GGG | - | chr8.3:48958381-48958400 | None:intergenic | 20.0% |
| !! | TCTTGTATATCTATAAATAG+GGG | + | chr8.3:48961181-48961200 | MS.gene32283:intron | 20.0% |
| !! | TTTCAGATATATAAATACTG+TGG | - | chr8.3:48957970-48957989 | None:intergenic | 20.0% |
| !! | TTTGAACCAAATAAGATATA+AGG | + | chr8.3:48957452-48957471 | MS.gene32283:CDS | 20.0% |
| !!! | AAAAAAAAAAGATTTGGTTG+AGG | + | chr8.3:48959562-48959581 | MS.gene32283:intron | 20.0% |
| !!! | ACTATTTATAAGAGAACTTT+TGG | + | chr8.3:48958517-48958536 | MS.gene32283:intron | 20.0% |
| !!! | AGCAACATTTTCTTATAAAT+TGG | - | chr8.3:48958556-48958575 | None:intergenic | 20.0% |
| !!! | AGTCTTATATACCTATAAAT+AGG | - | chr8.3:48958383-48958402 | None:intergenic | 20.0% |
| !!! | AGTCTTGTATATCTATAAAT+AGG | + | chr8.3:48961179-48961198 | MS.gene32283:intron | 20.0% |
| !!! | ATAAATTGATAATTATCGTC+AGG | - | chr8.3:48956848-48956867 | None:intergenic | 20.0% |
| !!! | ATCTCTTATTTCTGTTTATA+TGG | + | chr8.3:48957562-48957581 | MS.gene32283:intron | 20.0% |
| !!! | ATTTTCAAAAGCTAAAACAA+GGG | + | chr8.3:48959705-48959724 | MS.gene32283:intron | 20.0% |
| !!! | GGATTTTTTATAAAATACGA+AGG | - | chr8.3:48961294-48961313 | None:intergenic | 20.0% |
| !!! | GTTATTTGTTACATTGTTAA+TGG | + | chr8.3:48956061-48956080 | MS.gene32283:intron | 20.0% |
| !!! | GTTGTCTTTTTAATATTACT+GGG | + | chr8.3:48958628-48958647 | MS.gene32283:intron | 20.0% |
| !!! | TGTAAAAAGTACTGATATTT+TGG | - | chr8.3:48957795-48957814 | None:intergenic | 20.0% |
| !!! | TGTCTTTCTTTGTTTATTTT+AGG | + | chr8.3:48957261-48957280 | MS.gene32283:intron | 20.0% |
| !!! | TTACTATTTTACTTAGGATT+AGG | - | chr8.3:48958406-48958425 | None:intergenic | 20.0% |
| !!! | TTCTAAGCAAAATGATTTTA+GGG | + | chr8.3:48956583-48956602 | MS.gene32283:intron | 20.0% |
| !!! | TTTTTGAGTTTACATAAAAC+TGG | - | chr8.3:48959654-48959673 | None:intergenic | 20.0% |
| ! | AAAATTTCGTGAATAATGCA+TGG | - | chr8.3:48958024-48958043 | None:intergenic | 25.0% |
| ! | AAGACAAACATATAGTCATT+TGG | + | chr8.3:48959243-48959262 | MS.gene32283:intron | 25.0% |
| ! | AAGGAAAATTAGTAACAGAA+AGG | - | chr8.3:48957766-48957785 | None:intergenic | 25.0% |
| ! | AATGATATAAAGAGCTCTTT+CGG | + | chr8.3:48956161-48956180 | MS.gene32283:CDS | 25.0% |
| ! | ACAACAATTATATCTGATTC+GGG | - | chr8.3:48959827-48959846 | None:intergenic | 25.0% |
| ! | ACTCCTAATCCTAAATAAAT+AGG | - | chr8.3:48961162-48961181 | None:intergenic | 25.0% |
| ! | AGAAAAAAGCTGAAACAATA+AGG | - | chr8.3:48959487-48959506 | None:intergenic | 25.0% |
| ! | AGAAATAAGAGATTTAACTG+TGG | - | chr8.3:48957555-48957574 | None:intergenic | 25.0% |
| ! | AGTATGCCAATAAATATAGT+AGG | + | chr8.3:48956039-48956058 | MS.gene32283:intron | 25.0% |
| ! | ATAAATCAGTTTATAAGGTG+GGG | - | chr8.3:48958114-48958133 | None:intergenic | 25.0% |
| ! | ATTATTGTAGTTGCATGATA+TGG | + | chr8.3:48960510-48960529 | MS.gene32283:intron | 25.0% |
| ! | CAAAAATGAAAACTACTCTT+AGG | - | chr8.3:48961112-48961131 | None:intergenic | 25.0% |
| ! | CAAGTACCTTATATCTTATT+TGG | - | chr8.3:48957461-48957480 | None:intergenic | 25.0% |
| ! | CTATAAATCAGTTTATAAGG+TGG | - | chr8.3:48958116-48958135 | None:intergenic | 25.0% |
| ! | GATGAATATTGTCTTAAAGA+AGG | + | chr8.3:48960068-48960087 | MS.gene32283:CDS | 25.0% |
| ! | TAGACATATACTTTCAAAAG+AGG | + | chr8.3:48958868-48958887 | MS.gene32283:intron | 25.0% |
| ! | TATATCTGTTTCCAGATATT+TGG | + | chr8.3:48956734-48956753 | MS.gene32283:intron | 25.0% |
| ! | TCCAAATGAAATATCGAATT+CGG | - | chr8.3:48959930-48959949 | None:intergenic | 25.0% |
| ! | TGATACTATGTTGAAGTTAT+GGG | + | chr8.3:48958273-48958292 | MS.gene32283:intron | 25.0% |
| ! | TTTGTACTTTATCCTCTAAA+GGG | + | chr8.3:48959377-48959396 | MS.gene32283:intron | 25.0% |
| !! | AATGGATAAGATAATTTTGG+CGG | + | chr8.3:48957076-48957095 | MS.gene32283:intron | 25.0% |
| !! | ATATTGTGCATAAGCTTTAT+TGG | + | chr8.3:48956521-48956540 | MS.gene32283:intron | 25.0% |
| !! | CACCTTATAAACTGATTTAT+AGG | + | chr8.3:48958114-48958133 | MS.gene32283:intron | 25.0% |
| !! | CATTTTCAAAAGCTAAAACA+AGG | + | chr8.3:48959704-48959723 | MS.gene32283:intron | 25.0% |
| !! | CTAAAATCATTTTGCTTAGA+AGG | - | chr8.3:48956584-48956603 | None:intergenic | 25.0% |
| !! | CTTCTAAGCAAAATGATTTT+AGG | + | chr8.3:48956582-48956601 | MS.gene32283:intron | 25.0% |
| !! | CTTTTTAAACCTAATTTAGC+AGG | + | chr8.3:48958606-48958625 | MS.gene32283:intron | 25.0% |
| !! | GAATTTTCATTTTGAATGCA+GGG | + | chr8.3:48960021-48960040 | MS.gene32283:intron | 25.0% |
| !! | GGTTGTCTTTTTAATATTAC+TGG | + | chr8.3:48958627-48958646 | MS.gene32283:intron | 25.0% |
| !! | TCTAAGCAAAATGATTTTAG+GGG | + | chr8.3:48956584-48956603 | MS.gene32283:intron | 25.0% |
| !! | TGAATTTTCATTTTGAATGC+AGG | + | chr8.3:48960020-48960039 | MS.gene32283:intron | 25.0% |
| !! | TGGAATGGATAAGATAATTT+TGG | + | chr8.3:48957073-48957092 | MS.gene32283:intron | 25.0% |
| !! | TTTTCTCTAGTAATTGTGAA+CGG | + | chr8.3:48958759-48958778 | MS.gene32283:intron | 25.0% |
| !! | TTTTGTACTTTATCCTCTAA+AGG | + | chr8.3:48959376-48959395 | MS.gene32283:intron | 25.0% |
| !! | TTTTTACACATATACCCTTA+TGG | - | chr8.3:48958677-48958696 | None:intergenic | 25.0% |
| !!! | AAATCATTTTTGACAACTGA+TGG | + | chr8.3:48959514-48959533 | MS.gene32283:intron | 25.0% |
| !!! | AAGAAAATGTTGCTACTTTT+AGG | + | chr8.3:48958562-48958581 | MS.gene32283:intron | 25.0% |
| !!! | AGAAAATGTTGCTACTTTTA+GGG | + | chr8.3:48958563-48958582 | MS.gene32283:intron | 25.0% |
| !!! | CTTTTGAAAATGTGATTTCA+AGG | - | chr8.3:48959696-48959715 | None:intergenic | 25.0% |
| !!! | GTCTTAATTTTTTTTTGTGG+AGG | + | chr8.3:48959857-48959876 | MS.gene32283:intron | 25.0% |
| !!! | TATGCAGTTTTATAATCTGT+CGG | + | chr8.3:48960273-48960292 | MS.gene32283:intron | 25.0% |
| !!! | TTATGTAACAGTAGTTTGTT+AGG | + | chr8.3:48956545-48956564 | MS.gene32283:intron | 25.0% |
| !!! | TTCTCTTTACTTTTGTAGAT+TGG | + | chr8.3:48957592-48957611 | MS.gene32283:intron | 25.0% |
| AAAAATCCACAACTTCAACA+TGG | + | chr8.3:48961306-48961325 | MS.gene32283:intron | 30.0% | |
| AAAACAACAAATGAGCTCAT+AGG | + | chr8.3:48958710-48958729 | MS.gene32283:intron | 30.0% | |
| AAAAGACAACCTGCTAAATT+AGG | - | chr8.3:48958618-48958637 | None:intergenic | 30.0% | |
| AAAATCCACAACTTCAACAT+GGG | + | chr8.3:48961307-48961326 | MS.gene32283:intron | 30.0% | |
| AAACAATCTAGTACAATTCG+AGG | - | chr8.3:48959433-48959452 | None:intergenic | 30.0% | |
| AAACTCTAACCCCTATTTAT+AGG | + | chr8.3:48958369-48958388 | MS.gene32283:intron | 30.0% | |
| AAATAGAGGTTAGTGTTTAG+TGG | - | chr8.3:48960907-48960926 | None:intergenic | 30.0% | |
| AACCTGTTTCAAGATAGATT+TGG | - | chr8.3:48960765-48960784 | None:intergenic | 30.0% | |
| AACTTCAACATAGTATCAGA+GGG | - | chr8.3:48958271-48958290 | None:intergenic | 30.0% | |
| AATAATGATACCACATGTCA+CGG | + | chr8.3:48958233-48958252 | MS.gene32283:intron | 30.0% | |
| AATAGAAAACCTGTCATGTT+AGG | - | chr8.3:48956354-48956373 | None:intergenic | 30.0% | |
| AATCTATCTTGAAACAGGTT+AGG | + | chr8.3:48960765-48960784 | MS.gene32283:intron | 30.0% | |
| ACACTAACCTCTATTTATAG+AGG | + | chr8.3:48960911-48960930 | MS.gene32283:intron | 30.0% | |
| AGATGACATCTCTCTTAATT+TGG | - | chr8.3:48959127-48959146 | None:intergenic | 30.0% | |
| AGTTCTCTTATAAATAGTGC+CGG | - | chr8.3:48958515-48958534 | None:intergenic | 30.0% | |
| ATAAAACTTGTAGTAAGGCA+TGG | + | chr8.3:48958062-48958081 | MS.gene32283:intron | 30.0% | |
| ATAAATGTATAGGGAGAGAT+TGG | + | chr8.3:48957336-48957355 | MS.gene32283:intron | 30.0% | |
| ATCCAAATCTATCTTGAAAC+AGG | + | chr8.3:48960760-48960779 | MS.gene32283:intron | 30.0% | |
| ATCGTCAGGAATTAATGATT+GGG | - | chr8.3:48956834-48956853 | None:intergenic | 30.0% | |
| ATGGCATGATGTAATATTAC+TGG | - | chr8.3:48961250-48961269 | None:intergenic | 30.0% | |
| ATTCGATATTTCATTTGGAG+AGG | + | chr8.3:48959931-48959950 | MS.gene32283:CDS | 30.0% | |
| CATATAGGTCTATAGCATAA+AGG | - | chr8.3:48960877-48960896 | None:intergenic | 30.0% | |
| CTAATTTGATCTCTGCTATA+TGG | - | chr8.3:48960450-48960469 | None:intergenic | 30.0% | |
| CTGATACTATGTTGAAGTTA+TGG | + | chr8.3:48958272-48958291 | MS.gene32283:intron | 30.0% | |
| GAATAAAAAAGAAACACGGA+AGG | - | chr8.3:48960648-48960667 | None:intergenic | 30.0% | |
| GACTAGAAATTCGTTCTATA+GGG | + | chr8.3:48957680-48957699 | MS.gene32283:CDS | 30.0% | |
| GAGCTACTGTAAAATTGATT+TGG | + | chr8.3:48960237-48960256 | MS.gene32283:intron | 30.0% | |
| GATAAAGTCGGTAAGTAAAA+TGG | + | chr8.3:48957705-48957724 | MS.gene32283:intron | 30.0% | |
| GGCCTATAAATCAGTTTATA+AGG | - | chr8.3:48958119-48958138 | None:intergenic | 30.0% | |
| GTAATCATTCATTGGATCAT+AGG | + | chr8.3:48960334-48960353 | MS.gene32283:intron | 30.0% | |
| TAAAACTTGTAGTAAGGCAT+GGG | + | chr8.3:48958063-48958082 | MS.gene32283:intron | 30.0% | |
| TAACTTCAACATAGTATCAG+AGG | - | chr8.3:48958272-48958291 | None:intergenic | 30.0% | |
| TAGCAGAGATCAAATTAGAT+AGG | + | chr8.3:48960452-48960471 | MS.gene32283:intron | 30.0% | |
| TATCGTCAGGAATTAATGAT+TGG | - | chr8.3:48956835-48956854 | None:intergenic | 30.0% | |
| TATTATGGAAACTAAACCCT+AGG | + | chr8.3:48960995-48961014 | MS.gene32283:intron | 30.0% | |
| TCTTGTACCTCTATAAATAG+AGG | - | chr8.3:48960921-48960940 | None:intergenic | 30.0% | |
| TGAAGTAACCAACTTAAAAG+TGG | + | chr8.3:48959020-48959039 | MS.gene32283:intron | 30.0% | |
| TGAATTTCTATTCCAGCAAA+AGG | + | chr8.3:48956121-48956140 | MS.gene32283:intron | 30.0% | |
| TTCGATATTTCATTTGGAGA+GGG | + | chr8.3:48959932-48959951 | MS.gene32283:CDS | 30.0% | |
| TTCTATAGGGAAGATAAAGT+CGG | + | chr8.3:48957693-48957712 | MS.gene32283:CDS | 30.0% | |
| TTGAAATGTAAATGGTGTCT+AGG | - | chr8.3:48960555-48960574 | None:intergenic | 30.0% | |
| ! | ATCATTTTGCTTAGAAGGTT+TGG | - | chr8.3:48956579-48956598 | None:intergenic | 30.0% |
| ! | ATCTTAATGACAGAGTATCT+GGG | + | chr8.3:48961079-48961098 | MS.gene32283:intron | 30.0% |
| ! | ATGTCTCACAATTTTCCATA+AGG | + | chr8.3:48958659-48958678 | MS.gene32283:intron | 30.0% |
| ! | CAAAAGCATGTAGAATCAAA+TGG | - | chr8.3:48960584-48960603 | None:intergenic | 30.0% |
| ! | CGTCCTATTTATTTAGGATT+AGG | + | chr8.3:48961156-48961175 | MS.gene32283:intron | 30.0% |
| ! | TATCTTAATGACAGAGTATC+TGG | + | chr8.3:48961078-48961097 | MS.gene32283:intron | 30.0% |
| ! | TCTTCTAGAAGAAGTTGAAA+AGG | + | chr8.3:48960833-48960852 | MS.gene32283:CDS | 30.0% |
| ! | TGTCTCACAATTTTCCATAA+GGG | + | chr8.3:48958660-48958679 | MS.gene32283:intron | 30.0% |
| ! | TTGTAGATTGGTGTCTATTA+TGG | + | chr8.3:48957604-48957623 | MS.gene32283:intron | 30.0% |
| ! | TTTAGTGGTTTGTAGCATAT+AGG | - | chr8.3:48960892-48960911 | None:intergenic | 30.0% |
| !! | AAATGATTTTAGGGGATGTT+TGG | + | chr8.3:48956592-48956611 | MS.gene32283:intron | 30.0% |
| !! | AAATTGACTCCTCTAAAATG+AGG | - | chr8.3:48959408-48959427 | None:intergenic | 30.0% |
| !! | AATGTTGTAACAGCTAGTTT+TGG | - | chr8.3:48958158-48958177 | None:intergenic | 30.0% |
| !! | AGAACTTTTGGAGAACTTTT+TGG | + | chr8.3:48958529-48958548 | MS.gene32283:intron | 30.0% |
| !! | AGAGTAATAACTTTGACTTG+TGG | + | chr8.3:48957044-48957063 | MS.gene32283:intron | 30.0% |
| !! | CTAACTTGAGAAGTTGTTTT+AGG | + | chr8.3:48959883-48959902 | MS.gene32283:intron | 30.0% |
| !! | CTCTCTTAATTTGGTTGTTT+TGG | - | chr8.3:48959118-48959137 | None:intergenic | 30.0% |
| !! | GGAAAGTGTTGAAATGTAAA+TGG | - | chr8.3:48960563-48960582 | None:intergenic | 30.0% |
| !! | GTTCTAGAAATTATCTCCTA+GGG | - | chr8.3:48961014-48961033 | None:intergenic | 30.0% |
| !! | TGCCCAATATCATTTTTGTT+TGG | - | chr8.3:48958984-48959003 | None:intergenic | 30.0% |
| !! | TGTTCTAGAAATTATCTCCT+AGG | - | chr8.3:48961015-48961034 | None:intergenic | 30.0% |
| !! | TTGACTTGTAAAGAGAAAGA+TGG | + | chr8.3:48960376-48960395 | MS.gene32283:intron | 30.0% |
| !!! | ACTGATATTTTGGAGTAGAA+AGG | - | chr8.3:48957785-48957804 | None:intergenic | 30.0% |
| !!! | CTACATTTTGATTTCCGTTT+AGG | + | chr8.3:48957884-48957903 | MS.gene32283:intron | 30.0% |
| !!! | GGCATAAGCTATTTTTTGTT+TGG | - | chr8.3:48959633-48959652 | None:intergenic | 30.0% |
| AAAAGGTAGTGTTACGAGAT+TGG | + | chr8.3:48956184-48956203 | MS.gene32283:CDS | 35.0% | |
| AAAGGTAGTGTTACGAGATT+GGG | + | chr8.3:48956185-48956204 | MS.gene32283:CDS | 35.0% | |
| AACCAACTTAAAAGTGGTAG+AGG | + | chr8.3:48959026-48959045 | MS.gene32283:intron | 35.0% | |
| AACCGATGCAAAAAACTTCA+AGG | - | chr8.3:48957659-48957678 | None:intergenic | 35.0% | |
| AGAGGTAGTCATAACCAATA+AGG | + | chr8.3:48958886-48958905 | MS.gene32283:intron | 35.0% | |
| ATAAAGAGCTCTTTCGGAAA+AGG | + | chr8.3:48956167-48956186 | MS.gene32283:CDS | 35.0% | |
| ATACTATACTATACTCCCTC+CGG | + | chr8.3:48958493-48958512 | MS.gene32283:intron | 35.0% | |
| ATCCTAAATAAATAGGACGC+AGG | - | chr8.3:48961155-48961174 | None:intergenic | 35.0% | |
| ATGCTTCATGTTACATTCTC+TGG | + | chr8.3:48956477-48956496 | MS.gene32283:intron | 35.0% | |
| ATTAAGAGAGATGTCATCTG+TGG | + | chr8.3:48959128-48959147 | MS.gene32283:intron | 35.0% | |
| CAAAACATTGCAGTACTTGA+AGG | + | chr8.3:48960800-48960819 | MS.gene32283:CDS | 35.0% | |
| CAGAACATTCTAGACTAGAA+CGG | - | chr8.3:48959767-48959786 | None:intergenic | 35.0% | |
| CAGTGAGTTTGACAAAATCA+CGG | + | chr8.3:48956620-48956639 | MS.gene32283:intron | 35.0% | |
| CCTTTCAAGCAAAAACTCAA+AGG | + | chr8.3:48958832-48958851 | MS.gene32283:intron | 35.0% | |
| CGACTAGAAATTCGTTCTAT+AGG | + | chr8.3:48957679-48957698 | MS.gene32283:CDS | 35.0% | |
| CGGTATTGTCTGAAAACTAT+TGG | + | chr8.3:48960117-48960136 | MS.gene32283:intron | 35.0% | |
| CTAGAAGAAGTTGAAAAGGT+TGG | + | chr8.3:48960837-48960856 | MS.gene32283:intron | 35.0% | |
| GCCGAATTCGATATTTCATT+TGG | + | chr8.3:48959926-48959945 | MS.gene32283:CDS | 35.0% | |
| TCAGCAATGATTTCTTCAGT+TGG | - | chr8.3:48958940-48958959 | None:intergenic | 35.0% | |
| TCATTGAAGATTGTACCACT+AGG | - | chr8.3:48961335-48961354 | None:intergenic | 35.0% | |
| TCCAAAAGGAAGAATTGTAG+AGG | + | chr8.3:48956444-48956463 | MS.gene32283:CDS | 35.0% | |
| TGATTTCAAGGTTGCGTAAA+GGG | - | chr8.3:48959684-48959703 | None:intergenic | 35.0% | |
| TGCTTCATGTTACATTCTCT+GGG | + | chr8.3:48956478-48956497 | MS.gene32283:intron | 35.0% | |
| TGTCTAGGTTCATTGCATAT+AGG | - | chr8.3:48960540-48960559 | None:intergenic | 35.0% | |
| TTCCTGCGTCCTATTTATTT+AGG | + | chr8.3:48961150-48961169 | MS.gene32283:intron | 35.0% | |
| TTCTTCAGTTGGTTGATTGA+TGG | - | chr8.3:48958929-48958948 | None:intergenic | 35.0% | |
| TTGTAGTTGCATGATATGGT+TGG | + | chr8.3:48960514-48960533 | MS.gene32283:intron | 35.0% | |
| ! | ACCTCTACAATTCTTCCTTT+TGG | - | chr8.3:48956448-48956467 | None:intergenic | 35.0% |
| ! | ATGACAGGTTTTCTATTGTC+TGG | + | chr8.3:48956357-48956376 | MS.gene32283:intron | 35.0% |
| ! | CTTTTACATCCTCCAACATT+GGG | + | chr8.3:48960192-48960211 | MS.gene32283:intron | 35.0% |
| ! | GTTCTAGGCATAAACCTTAT+TGG | - | chr8.3:48958903-48958922 | None:intergenic | 35.0% |
| ! | TAGTTTTCAGACAATACCGA+TGG | - | chr8.3:48960116-48960135 | None:intergenic | 35.0% |
| ! | TCTTTTACATCCTCCAACAT+TGG | + | chr8.3:48960191-48960210 | MS.gene32283:intron | 35.0% |
| ! | TGATCCAGCATATTCTAAAG+CGG | + | chr8.3:48956961-48956980 | MS.gene32283:CDS | 35.0% |
| !! | ATTATTTTGTTGCCGAGTTC+TGG | - | chr8.3:48958219-48958238 | None:intergenic | 35.0% |
| !! | CCTTTGAGTTTTTGCTTGAA+AGG | - | chr8.3:48958835-48958854 | None:intergenic | 35.0% |
| !! | GTTGATTGATGGTTTGTTCT+AGG | - | chr8.3:48958918-48958937 | None:intergenic | 35.0% |
| !! | TTGGCTTTAGACTTTGCTTT+AGG | + | chr8.3:48956412-48956431 | MS.gene32283:CDS | 35.0% |
| !!! | AGGTCACACTTTTTTTTCTG+TGG | + | chr8.3:48959046-48959065 | MS.gene32283:intron | 35.0% |
| !!! | CTAGTTTTGGTTTCCATATG+TGG | - | chr8.3:48958145-48958164 | None:intergenic | 35.0% |
| !!! | TGCCTTGAAGTTTTTTGCAT+CGG | + | chr8.3:48957654-48957673 | MS.gene32283:CDS | 35.0% |
| !!! | TGTCGAGATTTTGACTATCT+CGG | + | chr8.3:48959289-48959308 | MS.gene32283:intron | 35.0% |
| !!! | TTTTTTTCTGTGGTTGCTGT+CGG | + | chr8.3:48959056-48959075 | MS.gene32283:intron | 35.0% |
| AAAAAAGAAACACGGAAGGC+AGG | - | chr8.3:48960644-48960663 | None:intergenic | 40.0% | |
| ACCATTGAGACACATACGAT+GGG | - | chr8.3:48960714-48960733 | None:intergenic | 40.0% | |
| ACGATGGGAAACACAAAGAA+GGG | - | chr8.3:48960699-48960718 | None:intergenic | 40.0% | |
| AGAGATTGGAATGCAGCAAA+TGG | + | chr8.3:48957350-48957369 | MS.gene32283:CDS | 40.0% | |
| AGGCATGGGTATGAGTTTAT+TGG | + | chr8.3:48958077-48958096 | MS.gene32283:intron | 40.0% | |
| ATATTTGGACCAGAAAGCAG+TGG | + | chr8.3:48956749-48956768 | MS.gene32283:CDS | 40.0% | |
| ATCGTATGTGTCTCAATGGT+GGG | + | chr8.3:48960714-48960733 | MS.gene32283:intron | 40.0% | |
| CTCTAGTAATTGTGAACGGA+GGG | + | chr8.3:48958763-48958782 | MS.gene32283:intron | 40.0% | |
| CTGAGGAATCAATTCTTCTG+TGG | - | chr8.3:48958185-48958204 | None:intergenic | 40.0% | |
| GAGATTGGAATGCAGCAAAT+GGG | + | chr8.3:48957351-48957370 | MS.gene32283:CDS | 40.0% | |
| GATTTCAAGGTTGCGTAAAG+GGG | - | chr8.3:48959683-48959702 | None:intergenic | 40.0% | |
| GCACTCTTACACGAACTTTA+AGG | - | chr8.3:48957932-48957951 | None:intergenic | 40.0% | |
| GTCAATAAGCTGGTAAGTGT+TGG | + | chr8.3:48959956-48959975 | MS.gene32283:intron | 40.0% | |
| GTGATTTCAAGGTTGCGTAA+AGG | - | chr8.3:48959685-48959704 | None:intergenic | 40.0% | |
| GTGCCCATATTGCATTATCA+GGG | + | chr8.3:48957098-48957117 | MS.gene32283:intron | 40.0% | |
| GTTTATGTCATGCAGAAGCT+AGG | + | chr8.3:48956902-48956921 | MS.gene32283:intron | 40.0% | |
| GTTTCACTTCAACTTCTGCT+CGG | - | chr8.3:48957238-48957257 | None:intergenic | 40.0% | |
| TACGATGGGAAACACAAAGA+AGG | - | chr8.3:48960700-48960719 | None:intergenic | 40.0% | |
| TAGGTCTATAGCATAAAGGC+AGG | - | chr8.3:48960873-48960892 | None:intergenic | 40.0% | |
| TATTTGGACCAGAAAGCAGT+GGG | + | chr8.3:48956750-48956769 | MS.gene32283:CDS | 40.0% | |
| TCCAACATTGGGATTTGTGA+AGG | + | chr8.3:48960203-48960222 | MS.gene32283:intron | 40.0% | |
| TCCTTCACAAATCCCAATGT+TGG | - | chr8.3:48960207-48960226 | None:intergenic | 40.0% | |
| TCTCTAGTAATTGTGAACGG+AGG | + | chr8.3:48958762-48958781 | MS.gene32283:intron | 40.0% | |
| TCTTGAAACAGGTTAGGACA+AGG | + | chr8.3:48960771-48960790 | MS.gene32283:intron | 40.0% | |
| TCTTGCTACCAATTCCAAGT+TGG | - | chr8.3:48959227-48959246 | None:intergenic | 40.0% | |
| TGAGTTTGACAAAATCACGG+TGG | + | chr8.3:48956623-48956642 | MS.gene32283:intron | 40.0% | |
| TTCAACATAGTATCAGAGGG+TGG | - | chr8.3:48958268-48958287 | None:intergenic | 40.0% | |
| TTCACAAATCCCAATGTTGG+AGG | - | chr8.3:48960204-48960223 | None:intergenic | 40.0% | |
| TTCATCTCCTTTGGCCTAAA+CGG | - | chr8.3:48957901-48957920 | None:intergenic | 40.0% | |
| TTGATTTCCGTTTAGGCCAA+AGG | + | chr8.3:48957891-48957910 | MS.gene32283:intron | 40.0% | |
| TTGTCTTAAAGAAGGGCTCT+TGG | + | chr8.3:48960076-48960095 | MS.gene32283:CDS | 40.0% | |
| TTTATAGGCCTAGCCACATA+TGG | + | chr8.3:48958129-48958148 | MS.gene32283:intron | 40.0% | |
| TTTCACTTCAACTTCTGCTC+GGG | - | chr8.3:48957237-48957256 | None:intergenic | 40.0% | |
| ! | AACTTTTCCCAGTGGATGTT+TGG | + | chr8.3:48956393-48956412 | MS.gene32283:CDS | 40.0% |
| ! | AAGAGTACAACCAGCTTTAG+AGG | - | chr8.3:48957427-48957446 | None:intergenic | 40.0% |
| ! | AGAAGTACAGGTAATTCGTC+TGG | + | chr8.3:48956802-48956821 | MS.gene32283:intron | 40.0% |
| ! | AGCACCCTGATAATGCAATA+TGG | - | chr8.3:48957105-48957124 | None:intergenic | 40.0% |
| ! | CTCTTATAAATAGTGCCGGA+GGG | - | chr8.3:48958511-48958530 | None:intergenic | 40.0% |
| ! | GCACCCTGATAATGCAATAT+GGG | - | chr8.3:48957104-48957123 | None:intergenic | 40.0% |
| ! | GCTTTAGACTTTGCTTTAGG+TGG | + | chr8.3:48956415-48956434 | MS.gene32283:CDS | 40.0% |
| ! | GGTATGAGTTTATTGGTGAC+TGG | + | chr8.3:48958084-48958103 | MS.gene32283:intron | 40.0% |
| ! | TCATGCTATTGCAGAAGTAC+AGG | + | chr8.3:48956790-48956809 | MS.gene32283:CDS | 40.0% |
| ! | TCGAATTCGGCTACTTTGTA+AGG | - | chr8.3:48959917-48959936 | None:intergenic | 40.0% |
| ! | TCTAAAGCCAAACATCCACT+GGG | - | chr8.3:48956403-48956422 | None:intergenic | 40.0% |
| ! | TCTCTTATAAATAGTGCCGG+AGG | - | chr8.3:48958512-48958531 | None:intergenic | 40.0% |
| ! | TGCAATAGCATGAAGTGCTA+GGG | - | chr8.3:48956783-48956802 | None:intergenic | 40.0% |
| ! | TGCTTTCTGGTCCAAATATC+TGG | - | chr8.3:48956748-48956767 | None:intergenic | 40.0% |
| ! | TGTAAGAGTGCAAAAGAGCA+AGG | + | chr8.3:48957941-48957960 | MS.gene32283:CDS | 40.0% |
| ! | TTAGACTTTGCTTTAGGTGG+TGG | + | chr8.3:48956418-48956437 | MS.gene32283:CDS | 40.0% |
| ! | TTTGGTTTCCATATGTGGCT+AGG | - | chr8.3:48958140-48958159 | None:intergenic | 40.0% |
| !! | ACCAATTCCAAGTTGGTCAT+CGG | - | chr8.3:48959220-48959239 | None:intergenic | 40.0% |
| !! | ACTTTGACTTGTGGTTGTGT+TGG | + | chr8.3:48957053-48957072 | MS.gene32283:intron | 40.0% |
| !! | ATATTCTAAAGCGGTAGGAG+TGG | + | chr8.3:48956970-48956989 | MS.gene32283:CDS | 40.0% |
| !! | GACCTCTACCACTTTTAAGT+TGG | - | chr8.3:48959031-48959050 | None:intergenic | 40.0% |
| AAGGGCTCTTGGTACAGTTA+TGG | + | chr8.3:48960087-48960106 | MS.gene32283:CDS | 45.0% | |
| AATCCAGAAGTGACAAGTGG+TGG | + | chr8.3:48957628-48957647 | MS.gene32283:CDS | 45.0% | |
| AATGATACCACATGTCACGG+AGG | + | chr8.3:48958236-48958255 | MS.gene32283:intron | 45.0% | |
| AATGCAGCAAATGGGATTGC+AGG | + | chr8.3:48957359-48957378 | MS.gene32283:CDS | 45.0% | |
| ACCGATGACCAACTTGGAAT+TGG | + | chr8.3:48959216-48959235 | MS.gene32283:intron | 45.0% | |
| ACTTCAACATGGGATCCTAG+TGG | + | chr8.3:48961317-48961336 | MS.gene32283:intron | 45.0% | |
| AGGATCCCATGTTGAAGTTG+TGG | - | chr8.3:48961315-48961334 | None:intergenic | 45.0% | |
| AGGGCTCTTGGTACAGTTAT+GGG | + | chr8.3:48960088-48960107 | MS.gene32283:CDS | 45.0% | |
| AGTCAAAATCTCGACAGCTG+TGG | - | chr8.3:48959285-48959304 | None:intergenic | 45.0% | |
| CAAGCTTTGCGTAAGATGTC+TGG | + | chr8.3:48957396-48957415 | MS.gene32283:CDS | 45.0% | |
| CACCATTGAGACACATACGA+TGG | - | chr8.3:48960715-48960734 | None:intergenic | 45.0% | |
| CAGACATCTTACGCAAAGCT+TGG | - | chr8.3:48957398-48957417 | None:intergenic | 45.0% | |
| CATCGTATGTGTCTCAATGG+TGG | + | chr8.3:48960713-48960732 | MS.gene32283:intron | 45.0% | |
| GAACTACCAGAGACTTTGAG+AGG | + | chr8.3:48959191-48959210 | MS.gene32283:intron | 45.0% | |
| GACTTGTGGTTGTGTTGGAA+TGG | + | chr8.3:48957058-48957077 | MS.gene32283:intron | 45.0% | |
| GCAGATCGTATGTGTAGATC+TGG | + | chr8.3:48957167-48957186 | MS.gene32283:CDS | 45.0% | |
| GCCAAAGGAGATGAAGAAGT+TGG | + | chr8.3:48957906-48957925 | MS.gene32283:CDS | 45.0% | |
| GCCAACTTCTTCATCTCCTT+TGG | - | chr8.3:48957910-48957929 | None:intergenic | 45.0% | |
| GGAAATCCAGAAGTGACAAG+TGG | + | chr8.3:48957625-48957644 | MS.gene32283:CDS | 45.0% | |
| GGTGCCCATATTGCATTATC+AGG | + | chr8.3:48957097-48957116 | MS.gene32283:intron | 45.0% | |
| GTCCACGCAAATGAGATCTA+TGG | - | chr8.3:48957195-48957214 | None:intergenic | 45.0% | |
| GTCCCTAACTTTCCAGAACT+CGG | + | chr8.3:48958204-48958223 | MS.gene32283:intron | 45.0% | |
| TATGTCATGCAGAAGCTAGG+AGG | + | chr8.3:48956905-48956924 | MS.gene32283:intron | 45.0% | |
| TCCCATCGTATGTGTCTCAA+TGG | + | chr8.3:48960710-48960729 | MS.gene32283:intron | 45.0% | |
| TCTATTCCAGCAAAAGGCTC+TGG | + | chr8.3:48956127-48956146 | MS.gene32283:intron | 45.0% | |
| TTCACTTCAACTTCTGCTCG+GGG | - | chr8.3:48957236-48957255 | None:intergenic | 45.0% | |
| ! | AATAGCATGAAGTGCTAGGG+TGG | - | chr8.3:48956780-48956799 | None:intergenic | 45.0% |
| ! | ATTAGAGCGCCTAACATGAC+AGG | + | chr8.3:48956342-48956361 | MS.gene32283:intron | 45.0% |
| ! | ATTCCACCACTTGTCACTTC+TGG | - | chr8.3:48957634-48957653 | None:intergenic | 45.0% |
| ! | CTGCAATAGCATGAAGTGCT+AGG | - | chr8.3:48956784-48956803 | None:intergenic | 45.0% |
| ! | GACTCGGTCTTGATGTTTGT+TGG | + | chr8.3:48959162-48959181 | MS.gene32283:intron | 45.0% |
| ! | GTCTAAAGCCAAACATCCAC+TGG | - | chr8.3:48956404-48956423 | None:intergenic | 45.0% |
| ! | TGCAGTGAAACTTTTCCCAG+TGG | + | chr8.3:48956385-48956404 | MS.gene32283:intron | 45.0% |
| ! | TTAGGTGGTGGTCTTCCAAA+AGG | + | chr8.3:48956430-48956449 | MS.gene32283:CDS | 45.0% |
| ! | TTCTGGAAAGTTAGGGACTG+AGG | - | chr8.3:48958202-48958221 | None:intergenic | 45.0% |
| !! | CCAGCATATTCTAAAGCGGT+AGG | + | chr8.3:48956965-48956984 | MS.gene32283:CDS | 45.0% |
| !! | CCTACCGCTTTAGAATATGC+TGG | - | chr8.3:48956968-48956987 | None:intergenic | 45.0% |
| !! | TCTGGAAATGCCTCTAAAGC+TGG | + | chr8.3:48957414-48957433 | MS.gene32283:CDS | 45.0% |
| !! | TGCATTATCAGGGTGCTGTA+TGG | + | chr8.3:48957108-48957127 | MS.gene32283:intron | 45.0% |
| !! | TGCCGAGTTCTGGAAAGTTA+GGG | - | chr8.3:48958209-48958228 | None:intergenic | 45.0% |
| !! | TTGCCGAGTTCTGGAAAGTT+AGG | - | chr8.3:48958210-48958229 | None:intergenic | 45.0% |
| !! | TATACATTTATATAAAAATT+TGG | - | chr8.3:48957327-48957346 | None:intergenic | 5.0% |
| !!! | AAATTTTTATATAAATGTAT+AGG | + | chr8.3:48957326-48957345 | MS.gene32283:intron | 5.0% |
| !!! | AATTTTTATATAAATGTATA+GGG | + | chr8.3:48957327-48957346 | MS.gene32283:intron | 5.0% |
| !!! | TACTTTTATTATATAATTTA+GGG | + | chr8.3:48957284-48957303 | MS.gene32283:intron | 5.0% |
| AAAGAAACACGGAAGGCAGG+AGG | - | chr8.3:48960641-48960660 | None:intergenic | 50.0% | |
| AATGAGGACACGCCCTTTAG+AGG | - | chr8.3:48959392-48959411 | None:intergenic | 50.0% | |
| AGAGAGATGTCATCTGTGGC+TGG | + | chr8.3:48959132-48959151 | MS.gene32283:intron | 50.0% | |
| AGAGCCATCTCTCCATGATC+TGG | - | chr8.3:48957022-48957041 | None:intergenic | 50.0% | |
| ATACCACATGTCACGGAGGA+TGG | + | chr8.3:48958240-48958259 | MS.gene32283:intron | 50.0% | |
| ATCGTGTGCCAACCAGATCA+TGG | + | chr8.3:48957007-48957026 | MS.gene32283:CDS | 50.0% | |
| CATGACGTTGGTCGGATGAT+GGG | + | chr8.3:48959088-48959107 | MS.gene32283:intron | 50.0% | |
| CCAACCAGATCATGGAGAGA+TGG | + | chr8.3:48957015-48957034 | MS.gene32283:CDS | 50.0% | |
| CCATCTCTCCATGATCTGGT+TGG | - | chr8.3:48957018-48957037 | None:intergenic | 50.0% | |
| CGCCATAGATCTCATTTGCG+TGG | + | chr8.3:48957190-48957209 | MS.gene32283:CDS | 50.0% | |
| GGCTTAACCATGACGTTGGT+CGG | + | chr8.3:48959080-48959099 | MS.gene32283:intron | 50.0% | |
| GGGCTCTTGGTACAGTTATG+GGG | + | chr8.3:48960089-48960108 | MS.gene32283:CDS | 50.0% | |
| GGTACAGTTATGGGGACCAT+CGG | + | chr8.3:48960097-48960116 | MS.gene32283:CDS | 50.0% | |
| TGGAGAGGGAGTCAATAAGC+TGG | + | chr8.3:48959946-48959965 | MS.gene32283:CDS | 50.0% | |
| ! | AGGGCGTGTCCTCATTTTAG+AGG | + | chr8.3:48959396-48959415 | MS.gene32283:intron | 50.0% |
| ! | GTATGTGTCTCAATGGTGGG+TGG | + | chr8.3:48960717-48960736 | MS.gene32283:intron | 50.0% |
| ! | TTTTCTGTGGTTGCTGTCGG+AGG | + | chr8.3:48959059-48959078 | MS.gene32283:intron | 50.0% |
| CCATCATCCGACCAACGTCA+TGG | - | chr8.3:48959090-48959109 | None:intergenic | 55.0% | |
| CCATGACGTTGGTCGGATGA+TGG | + | chr8.3:48959087-48959106 | MS.gene32283:intron | 55.0% | |
| CGGAGGCTTAACCATGACGT+TGG | + | chr8.3:48959076-48959095 | MS.gene32283:intron | 55.0% | |
| CGGTCACCTCTCAAAGTCTC+TGG | - | chr8.3:48959200-48959219 | None:intergenic | 55.0% | |
| GAGGTGACCGATGACCAACT+TGG | + | chr8.3:48959210-48959229 | MS.gene32283:intron | 55.0% | |
| GTACCATCCTCCGTGACATG+TGG | - | chr8.3:48958246-48958265 | None:intergenic | 55.0% | |
| GTGGTCTTCCCACTGCTTTC+TGG | - | chr8.3:48956761-48956780 | None:intergenic | 55.0% | |
| GTTACGAGATTGGGCAGTGC+TGG | + | chr8.3:48956194-48956213 | MS.gene32283:CDS | 55.0% | |
| TGTGGCTGGTGTAGACGACT+CGG | + | chr8.3:48959146-48959165 | MS.gene32283:intron | 55.0% | |
| ! | CTGCTTCCAGAGCCTTTTGC+TGG | - | chr8.3:48956136-48956155 | None:intergenic | 55.0% |
| TCGGGGAGTGAGAGCTGAGA+CGG | - | chr8.3:48957219-48957238 | None:intergenic | 60.0% | |
| ! | ACGAGATTGGGCAGTGCTGG+TGG | + | chr8.3:48956197-48956216 | MS.gene32283:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 48956031 | 48961354 | 48956031 | ID=MS.gene32283 |
| chr8.3 | mRNA | 48956031 | 48961354 | 48956031 | ID=MS.gene32283.t1;Parent=MS.gene32283 |
| chr8.3 | exon | 48956031 | 48956039 | 48956031 | ID=MS.gene32283.t1.exon1;Parent=MS.gene32283.t1 |
| chr8.3 | CDS | 48956031 | 48956039 | 48956031 | ID=cds.MS.gene32283.t1;Parent=MS.gene32283.t1 |
| chr8.3 | exon | 48956137 | 48956228 | 48956137 | ID=MS.gene32283.t1.exon2;Parent=MS.gene32283.t1 |
| chr8.3 | CDS | 48956137 | 48956228 | 48956137 | ID=cds.MS.gene32283.t1;Parent=MS.gene32283.t1 |
| chr8.3 | exon | 48956390 | 48956465 | 48956390 | ID=MS.gene32283.t1.exon3;Parent=MS.gene32283.t1 |
| chr8.3 | CDS | 48956390 | 48956465 | 48956390 | ID=cds.MS.gene32283.t1;Parent=MS.gene32283.t1 |
| chr8.3 | exon | 48956749 | 48956811 | 48956749 | ID=MS.gene32283.t1.exon4;Parent=MS.gene32283.t1 |
| chr8.3 | CDS | 48956749 | 48956811 | 48956749 | ID=cds.MS.gene32283.t1;Parent=MS.gene32283.t1 |
| chr8.3 | exon | 48956917 | 48957046 | 48956917 | ID=MS.gene32283.t1.exon5;Parent=MS.gene32283.t1 |
| chr8.3 | CDS | 48956917 | 48957046 | 48956917 | ID=cds.MS.gene32283.t1;Parent=MS.gene32283.t1 |
| chr8.3 | exon | 48957165 | 48957250 | 48957165 | ID=MS.gene32283.t1.exon6;Parent=MS.gene32283.t1 |
| chr8.3 | CDS | 48957165 | 48957250 | 48957165 | ID=cds.MS.gene32283.t1;Parent=MS.gene32283.t1 |
| chr8.3 | exon | 48957348 | 48957473 | 48957348 | ID=MS.gene32283.t1.exon7;Parent=MS.gene32283.t1 |
| chr8.3 | CDS | 48957348 | 48957473 | 48957348 | ID=cds.MS.gene32283.t1;Parent=MS.gene32283.t1 |
| chr8.3 | exon | 48957610 | 48957714 | 48957610 | ID=MS.gene32283.t1.exon8;Parent=MS.gene32283.t1 |
| chr8.3 | CDS | 48957610 | 48957714 | 48957610 | ID=cds.MS.gene32283.t1;Parent=MS.gene32283.t1 |
| chr8.3 | exon | 48957906 | 48957962 | 48957906 | ID=MS.gene32283.t1.exon9;Parent=MS.gene32283.t1 |
| chr8.3 | CDS | 48957906 | 48957962 | 48957906 | ID=cds.MS.gene32283.t1;Parent=MS.gene32283.t1 |
| chr8.3 | exon | 48959905 | 48959967 | 48959905 | ID=MS.gene32283.t1.exon10;Parent=MS.gene32283.t1 |
| chr8.3 | CDS | 48959905 | 48959967 | 48959905 | ID=cds.MS.gene32283.t1;Parent=MS.gene32283.t1 |
| chr8.3 | exon | 48960042 | 48960118 | 48960042 | ID=MS.gene32283.t1.exon11;Parent=MS.gene32283.t1 |
| chr8.3 | CDS | 48960042 | 48960118 | 48960042 | ID=cds.MS.gene32283.t1;Parent=MS.gene32283.t1 |
| chr8.3 | exon | 48960782 | 48960854 | 48960782 | ID=MS.gene32283.t1.exon12;Parent=MS.gene32283.t1 |
| chr8.3 | CDS | 48960782 | 48960854 | 48960782 | ID=cds.MS.gene32283.t1;Parent=MS.gene32283.t1 |
| chr8.3 | exon | 48961337 | 48961354 | 48961337 | ID=MS.gene32283.t1.exon13;Parent=MS.gene32283.t1 |
| chr8.3 | CDS | 48961337 | 48961354 | 48961337 | ID=cds.MS.gene32283.t1;Parent=MS.gene32283.t1 |
| Gene Sequence |
| Protein sequence |
