Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32460.t1 | XP_003588420.2 | 98.7 | 304 | 4 | 0 | 1 | 304 | 1 | 304 | 4.30E-160 | 573.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32460.t1 | Q96B26 | 35.6 | 284 | 167 | 4 | 21 | 302 | 5 | 274 | 3.6e-46 | 186.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32460.t1 | G7I253 | 98.7 | 304 | 4 | 0 | 1 | 304 | 1 | 304 | 3.1e-160 | 573.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32460 | MS.gene055162 | PPI |
| MS.gene32460 | MS.gene25097 | PPI |
| MS.gene32460 | MS.gene051172 | PPI |
| MS.gene051241 | MS.gene32460 | PPI |
| MS.gene32460 | MS.gene051245 | PPI |
| MS.gene32460 | MS.gene23567 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32460.t1 | MTR_1g007060 | 98.684 | 304 | 4 | 0 | 1 | 304 | 1 | 304 | 0.0 | 612 |
| MS.gene32460.t1 | MTR_1g007060 | 98.556 | 277 | 4 | 0 | 1 | 277 | 1 | 277 | 0.0 | 558 |
| MS.gene32460.t1 | MTR_1g063090 | 27.465 | 284 | 186 | 6 | 28 | 304 | 17 | 287 | 8.08e-30 | 115 |
| MS.gene32460.t1 | MTR_2g019210 | 26.978 | 278 | 184 | 6 | 28 | 302 | 17 | 278 | 2.66e-28 | 112 |
| MS.gene32460.t1 | MTR_2g019210 | 26.978 | 278 | 184 | 6 | 28 | 302 | 17 | 278 | 1.53e-27 | 111 |
| MS.gene32460.t1 | MTR_8g077430 | 28.966 | 290 | 175 | 5 | 29 | 304 | 11 | 283 | 7.19e-25 | 101 |
| MS.gene32460.t1 | MTR_1g031820 | 28.819 | 288 | 180 | 6 | 28 | 304 | 407 | 680 | 2.23e-24 | 103 |
| MS.gene32460.t1 | MTR_8g077430 | 27.074 | 229 | 136 | 5 | 90 | 304 | 3 | 214 | 3.53e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32460.t1 | AT1G60080 | 71.477 | 298 | 79 | 2 | 1 | 294 | 1 | 296 | 3.88e-147 | 416 |
| MS.gene32460.t1 | AT3G07750 | 28.929 | 280 | 186 | 5 | 28 | 302 | 9 | 280 | 4.82e-26 | 104 |
| MS.gene32460.t1 | AT3G07750 | 28.929 | 280 | 186 | 5 | 28 | 302 | 9 | 280 | 4.82e-26 | 104 |
| MS.gene32460.t1 | AT3G60500 | 25.714 | 280 | 192 | 5 | 28 | 304 | 17 | 283 | 4.32e-22 | 95.5 |
| MS.gene32460.t1 | AT3G60500 | 25.714 | 280 | 192 | 5 | 28 | 304 | 17 | 283 | 1.95e-21 | 94.4 |
| MS.gene32460.t1 | AT3G60500 | 25.714 | 280 | 192 | 5 | 28 | 304 | 17 | 283 | 1.95e-21 | 94.4 |
| MS.gene32460.t1 | AT3G60500 | 25.714 | 280 | 192 | 5 | 28 | 304 | 17 | 283 | 1.95e-21 | 94.4 |
| MS.gene32460.t1 | AT3G12990 | 26.236 | 263 | 176 | 6 | 28 | 286 | 17 | 265 | 7.76e-21 | 90.5 |
| MS.gene32460.t1 | AT3G12990 | 26.236 | 263 | 176 | 6 | 28 | 286 | 17 | 265 | 1.07e-20 | 90.5 |
| MS.gene32460.t1 | AT3G12990 | 26.236 | 263 | 176 | 6 | 28 | 286 | 17 | 265 | 1.07e-20 | 90.5 |
| MS.gene32460.t1 | AT3G12990 | 27.338 | 139 | 98 | 1 | 28 | 166 | 17 | 152 | 2.48e-14 | 71.2 |
Find 73 sgRNAs with CRISPR-Local
Find 460 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACCAGACGAGGGTTATTT+AGG | 0.229294 | 1.4:-12144186 | MS.gene32460:intron |
| CGATTTGTTCTCCGATTGTT+AGG | 0.294873 | 1.4:-12144039 | MS.gene32460:CDS |
| TCTGCTTCAGCAGGCCTGCC+AGG | 0.301518 | 1.4:+12144016 | None:intergenic |
| GACAAAGGAGCAAGTCAATA+AGG | 0.312720 | 1.4:-12139822 | MS.gene32460:CDS |
| TGTCACATGGGTTTCCACTA+TGG | 0.313492 | 1.4:+12139703 | None:intergenic |
| AATGCAGGATATCTATTGTT+TGG | 0.323709 | 1.4:-12143260 | MS.gene32460:intron |
| GGTGCTGTTGCATCTGCTAA+TGG | 0.344645 | 1.4:-12144399 | MS.gene32460:CDS |
| TCCTCCGTTGCAGCAGCATT+TGG | 0.348161 | 1.4:+12145648 | None:intergenic |
| CAAGATGACGTTCGAAATAT+CGG | 0.353462 | 1.4:+12145577 | None:intergenic |
| TATGTTGACTGCCATTAAAA+TGG | 0.360089 | 1.4:-12144232 | MS.gene32460:CDS |
| AGTATGCATGTTAATGATAA+TGG | 0.378572 | 1.4:+12139770 | None:intergenic |
| AACCCATGTGACAATCGTTC+TGG | 0.387086 | 1.4:-12139693 | MS.gene32460:CDS |
| AGCTGCATGGATGGCTTACT+TGG | 0.402269 | 1.4:-12143415 | MS.gene32460:intron |
| TGCCTATACTTCTGCTATCC+AGG | 0.404216 | 1.4:-12139621 | MS.gene32460:intron |
| CTCCGATTGTTAGGCCTGGC+AGG | 0.405390 | 1.4:-12144030 | MS.gene32460:CDS |
| GGAGGATTTGTCGTCTGAAA+TGG | 0.407849 | 1.4:-12145631 | MS.gene32460:CDS |
| CGGAGGCATATGGAAGTCTA+TGG | 0.408748 | 1.4:+12144060 | None:intergenic |
| GATTAAAACTTGCCTTGTAA+TGG | 0.411652 | 1.4:+12143964 | None:intergenic |
| CAGGCCTGCTGAAGCAGAGC+CGG | 0.424939 | 1.4:-12144011 | MS.gene32460:CDS |
| CGAAATATCGGAGCGGGAAA+AGG | 0.449213 | 1.4:+12145589 | None:intergenic |
| GGAAGTTATGACTCCTTCCT+TGG | 0.451336 | 1.4:-12144211 | MS.gene32460:CDS |
| GTGCTGTTGCATCTGCTAAT+GGG | 0.462693 | 1.4:-12144398 | MS.gene32460:CDS |
| GGGTCAGCTCTTGTGAAGAT+TGG | 0.474905 | 1.4:-12144378 | MS.gene32460:CDS |
| GGCCTGCCAGGCCTAACAAT+CGG | 0.478065 | 1.4:+12144028 | None:intergenic |
| GAGAACAAATCGGAGGCATA+TGG | 0.481259 | 1.4:+12144050 | None:intergenic |
| ATCTATTGTTTGGATGCTGA+CGG | 0.493395 | 1.4:-12143250 | MS.gene32460:CDS |
| GCAGAAGTATAGGCAAGAAC+TGG | 0.495829 | 1.4:+12139629 | None:intergenic |
| TTCCTTGGAGTCACCAGACG+AGG | 0.497940 | 1.4:-12144196 | MS.gene32460:CDS |
| CTAATATCTCTTTACAAGCC+TGG | 0.503737 | 1.4:-12139656 | MS.gene32460:CDS |
| ACAATCGTTCTGGATACATC+TGG | 0.510136 | 1.4:-12139683 | MS.gene32460:CDS |
| ATGGATTCTTCTTCTGCAGT+AGG | 0.517127 | 1.4:+12139722 | None:intergenic |
| ACAACCGGCTCTGCTTCAGC+AGG | 0.520816 | 1.4:+12144007 | None:intergenic |
| TGATTTGAGAGAGCTGTCCT+TGG | 0.521845 | 1.4:-12143448 | MS.gene32460:CDS |
| GACGTTCGAAATATCGGAGC+GGG | 0.522328 | 1.4:+12145583 | None:intergenic |
| GAACCTAAATAACCCTCGTC+TGG | 0.522939 | 1.4:+12144183 | None:intergenic |
| GACAACTGCTTTGACACAAC+CGG | 0.523266 | 1.4:+12143992 | None:intergenic |
| AGAGAGCTGTCCTTGGTTGG+TGG | 0.523813 | 1.4:-12143441 | MS.gene32460:CDS |
| TCTATTGTTTGGATGCTGAC+GGG | 0.526345 | 1.4:-12143249 | MS.gene32460:CDS |
| CTTCACTCTTTGCCTAGTCA+AGG | 0.527124 | 1.4:+12138891 | None:intergenic |
| CAAAGAAAATTCTGCTATGG+AGG | 0.528144 | 1.4:-12138848 | MS.gene32460:CDS |
| AGACAAAGAAAATTCTGCTA+TGG | 0.528919 | 1.4:-12138851 | MS.gene32460:CDS |
| CTAACAATCGGAGAACAAAT+CGG | 0.530418 | 1.4:+12144040 | None:intergenic |
| GCTGAATCTATTCGTTCTGA+TGG | 0.531863 | 1.4:-12145555 | MS.gene32460:CDS |
| TAGGCAAGAACTGGCCCACC+AGG | 0.534699 | 1.4:+12139638 | None:intergenic |
| GTACTCATGTCTGATGAAGA+TGG | 0.534833 | 1.4:-12139854 | MS.gene32460:CDS |
| AGGACTGTGTTGCCTTGACT+AGG | 0.535125 | 1.4:-12138903 | MS.gene32460:CDS |
| ACTTCACAAGAACTACATCT+TGG | 0.539032 | 1.4:-12139750 | MS.gene32460:CDS |
| TCCAAATGCTGCTGCAACGG+AGG | 0.548875 | 1.4:-12145649 | MS.gene32460:CDS |
| TTGAGAGAGCTGTCCTTGGT+TGG | 0.551649 | 1.4:-12143444 | MS.gene32460:CDS |
| TCATCATTCATGGCTACAGC+AGG | 0.551700 | 1.4:+12139887 | None:intergenic |
| AACTTGCCTTGTAATGGTGT+CGG | 0.554769 | 1.4:+12143970 | None:intergenic |
| TGTTCTCCGATTGTTAGGCC+TGG | 0.555136 | 1.4:-12144034 | MS.gene32460:CDS |
| AGCAAGTCAATAAGGAGAAG+AGG | 0.555566 | 1.4:-12139814 | MS.gene32460:CDS |
| TACCTGGATAGCAGAAGTAT+AGG | 0.563807 | 1.4:+12139619 | None:intergenic |
| TGGTGGAAAAGCTGCATGGA+TGG | 0.577853 | 1.4:-12143424 | MS.gene32460:CDS |
| TGCAGAAGAAGAATCCATAG+TGG | 0.580538 | 1.4:-12139717 | MS.gene32460:CDS |
| AGTTGTCCGACACCATTACA+AGG | 0.583544 | 1.4:-12143976 | MS.gene32460:intron |
| TCTTGTGAAGATTGGATCCA+CGG | 0.589881 | 1.4:-12144370 | MS.gene32460:intron |
| ATCCAGAACGATTGTCACAT+GGG | 0.589969 | 1.4:+12139691 | None:intergenic |
| ACCCTCGTCTGGTGACTCCA+AGG | 0.603548 | 1.4:+12144194 | None:intergenic |
| TCGTCTGGTGACTCCAAGGA+AGG | 0.603806 | 1.4:+12144198 | None:intergenic |
| TATCCAGAACGATTGTCACA+TGG | 0.603874 | 1.4:+12139690 | None:intergenic |
| CTTGACTAGGCAAAGAGTGA+AGG | 0.612342 | 1.4:-12138890 | MS.gene32460:CDS |
| TGTTCCAAATGCTGCTGCAA+CGG | 0.613285 | 1.4:-12145652 | MS.gene32460:CDS |
| TATCTCTTTACAAGCCTGGT+GGG | 0.624143 | 1.4:-12139652 | MS.gene32460:CDS |
| GTATCTCTAGCTTCTCTAAG+CGG | 0.649076 | 1.4:+12145528 | None:intergenic |
| TGGTTGGTGGAAAAGCTGCA+TGG | 0.657772 | 1.4:-12143428 | MS.gene32460:CDS |
| AGATGGACAGAAGCAGACAA+AGG | 0.661694 | 1.4:-12139837 | MS.gene32460:CDS |
| ATATCTCTTTACAAGCCTGG+TGG | 0.666867 | 1.4:-12139653 | MS.gene32460:CDS |
| GCTGTAGCCATGAATGATGA+CGG | 0.675670 | 1.4:-12139884 | MS.gene32460:CDS |
| TCCTTGGAGTCACCAGACGA+GGG | 0.681238 | 1.4:-12144195 | MS.gene32460:CDS |
| ACAATCGGAGAACAAATCGG+AGG | 0.723892 | 1.4:+12144043 | None:intergenic |
| TGACGTTCGAAATATCGGAG+CGG | 0.754034 | 1.4:+12145582 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATAATAATAACATTG+CGG | + | chr1.4:12141336-12141355 | None:intergenic | 10.0% |
| !!! | AGCAAAATATTTTTTTTTAA+TGG | - | chr1.4:12141596-12141615 | MS.gene32460:intron | 10.0% |
| !!! | ATTATTATTATTTTTTTGAC+AGG | - | chr1.4:12141343-12141362 | MS.gene32460:intron | 10.0% |
| !!! | GCAAAATATTTTTTTTTAAT+GGG | - | chr1.4:12141597-12141616 | MS.gene32460:intron | 10.0% |
| !! | AAGAAATTAAAATAAGATAC+AGG | + | chr1.4:12141009-12141028 | None:intergenic | 15.0% |
| !! | ACAACATATAATGAAATTTA+AGG | - | chr1.4:12141477-12141496 | MS.gene32460:intron | 15.0% |
| !! | TAAAACAACATAAGTAAAAA+AGG | + | chr1.4:12144426-12144445 | None:intergenic | 15.0% |
| !! | TAATTCTATTACAAAAGTAA+AGG | + | chr1.4:12139808-12139827 | None:intergenic | 15.0% |
| !! | TTACAACTATGATTAAAATT+TGG | - | chr1.4:12144287-12144306 | MS.gene32460:intron | 15.0% |
| !! | TTATAACTGAAGATAAATAA+AGG | - | chr1.4:12139217-12139236 | MS.gene32460:intron | 15.0% |
| !!! | AAAGTTAAGTTTTTTCTTAT+AGG | + | chr1.4:12139551-12139570 | None:intergenic | 15.0% |
| !!! | CATTTGTTATTATGATATAT+TGG | - | chr1.4:12141970-12141989 | MS.gene32460:intron | 15.0% |
| !!! | TCTATCATATTTTGATATAT+TGG | - | chr1.4:12141842-12141861 | MS.gene32460:intron | 15.0% |
| !! | AAAAAGTTCCTTTAAATCTA+AGG | + | chr1.4:12140706-12140725 | None:intergenic | 20.0% |
| !! | AAAGAAGAATAATGAGAAAA+TGG | - | chr1.4:12143725-12143744 | MS.gene32460:intron | 20.0% |
| !! | ACATATATCATTAACATTCA+TGG | - | chr1.4:12144954-12144973 | MS.gene32460:intron | 20.0% |
| !! | ACTACAAACTAAATATAGTA+AGG | + | chr1.4:12145299-12145318 | None:intergenic | 20.0% |
| !! | TTTATCCAACATAATTGTTT+GGG | - | chr1.4:12144253-12144272 | MS.gene32460:intron | 20.0% |
| !!! | AAGCTATTTTCATAATGTAT+TGG | - | chr1.4:12139126-12139145 | MS.gene32460:intron | 20.0% |
| !!! | ATGTTATAATTTTGGGTAAT+CGG | - | chr1.4:12140915-12140934 | MS.gene32460:intron | 20.0% |
| !!! | CTTTATGTTATCTTTTGTTA+TGG | - | chr1.4:12139567-12139586 | MS.gene32460:intron | 20.0% |
| !!! | TAAAATTTGGTTTTGTGTTA+TGG | - | chr1.4:12144300-12144319 | MS.gene32460:intron | 20.0% |
| !!! | TAAAGTTGATTTTGTTTTAC+TGG | - | chr1.4:12145531-12145550 | MS.gene32460:CDS | 20.0% |
| !!! | TAAGAGTTGATATTATAAGT+TGG | - | chr1.4:12139604-12139623 | MS.gene32460:intron | 20.0% |
| !!! | TAATTGTATTGATTTGGAAA+AGG | + | chr1.4:12143428-12143447 | None:intergenic | 20.0% |
| !!! | TTCTTACTTTTATTTTGTTG+CGG | + | chr1.4:12141915-12141934 | None:intergenic | 20.0% |
| !!! | TTGGTCTATGTTATAATTTT+GGG | - | chr1.4:12140908-12140927 | MS.gene32460:intron | 20.0% |
| ! | AAAAAACAAATAACTAACCG+TGG | + | chr1.4:12140147-12140166 | None:intergenic | 25.0% |
| ! | AAACTAACCAAGAAAAATAC+TGG | + | chr1.4:12138994-12139013 | None:intergenic | 25.0% |
| ! | AAAGGAACAATTACAATTGA+TGG | + | chr1.4:12143410-12143429 | None:intergenic | 25.0% |
| ! | AATCGTGAATAACATACTAA+AGG | + | chr1.4:12140033-12140052 | None:intergenic | 25.0% |
| ! | ACAAACTAAATATAGTAAGG+TGG | + | chr1.4:12145296-12145315 | None:intergenic | 25.0% |
| ! | ACTTAAGGAAACTCAAATTT+AGG | + | chr1.4:12144385-12144404 | None:intergenic | 25.0% |
| ! | AGTATGCATGTTAATGATAA+TGG | + | chr1.4:12144730-12144749 | None:intergenic | 25.0% |
| ! | ATAGATAGTTTAAATTCGAC+TGG | + | chr1.4:12140978-12140997 | None:intergenic | 25.0% |
| ! | ATGGAAAAGAGGAAAATAAA+GGG | - | chr1.4:12140662-12140681 | MS.gene32460:intron | 25.0% |
| ! | ATGGAACTAGCATTATATAA+GGG | - | chr1.4:12143240-12143259 | MS.gene32460:CDS | 25.0% |
| ! | ATTAATACAAAAGATCTCAG+AGG | - | chr1.4:12145165-12145184 | MS.gene32460:intron | 25.0% |
| ! | ATTATTGAATGACATAATGC+AGG | - | chr1.4:12141222-12141241 | MS.gene32460:intron | 25.0% |
| ! | ATTCACATTAACGATATCAA+TGG | + | chr1.4:12144508-12144527 | None:intergenic | 25.0% |
| ! | GCAATAATGAATTCTTCAAA+GGG | + | chr1.4:12143658-12143677 | None:intergenic | 25.0% |
| ! | GTTTATCCAACATAATTGTT+TGG | - | chr1.4:12144252-12144271 | MS.gene32460:intron | 25.0% |
| ! | GTTTGTATGTAATACAATGA+AGG | - | chr1.4:12145428-12145447 | MS.gene32460:intron | 25.0% |
| ! | TACATAGGTCAAAATCAATA+CGG | + | chr1.4:12144565-12144584 | None:intergenic | 25.0% |
| ! | TACTTCTATATGTGAATATC+AGG | - | chr1.4:12145244-12145263 | MS.gene32460:intron | 25.0% |
| ! | TATAGAAGTAAGCTTGAATA+TGG | + | chr1.4:12145234-12145253 | None:intergenic | 25.0% |
| ! | TATATGTGAATATCAGGATT+TGG | - | chr1.4:12145250-12145269 | MS.gene32460:intron | 25.0% |
| ! | TATGTTAATTACGATTGTTG+TGG | - | chr1.4:12145567-12145586 | MS.gene32460:CDS | 25.0% |
| ! | TTACAATGTCATTAAGTGAT+AGG | - | chr1.4:12141700-12141719 | MS.gene32460:intron | 25.0% |
| ! | TTAGTATGTTATTCACGATT+GGG | - | chr1.4:12140033-12140052 | MS.gene32460:intron | 25.0% |
| ! | TTTAGTATGTTATTCACGAT+TGG | - | chr1.4:12140032-12140051 | MS.gene32460:intron | 25.0% |
| !! | AAGTAATACAAAGAGCTTTT+CGG | - | chr1.4:12142026-12142045 | MS.gene32460:intron | 25.0% |
| !! | ACGATTTTTGTGATGAATTA+TGG | - | chr1.4:12145103-12145122 | MS.gene32460:intron | 25.0% |
| !! | AGCTTAATATATAGCTCTTT+TGG | + | chr1.4:12143570-12143589 | None:intergenic | 25.0% |
| !! | AGTCATAACTTCCATTTTAA+TGG | + | chr1.4:12140279-12140298 | None:intergenic | 25.0% |
| !! | ATATTTTCCTCTCAAATTCA+AGG | - | chr1.4:12142207-12142226 | MS.gene32460:intron | 25.0% |
| !! | ATGTTGACTATGATATGATA+TGG | + | chr1.4:12144938-12144957 | None:intergenic | 25.0% |
| !! | ATTGACTTAATTGAGCTTAT+GGG | - | chr1.4:12139373-12139392 | MS.gene32460:intron | 25.0% |
| !! | ATTGATAACTACACATTCAA+AGG | + | chr1.4:12141204-12141223 | None:intergenic | 25.0% |
| !! | GAAATTTTCCACAAATTAGT+AGG | + | chr1.4:12144137-12144156 | None:intergenic | 25.0% |
| !! | TAGACAAATACATTCTAGTT+GGG | - | chr1.4:12141505-12141524 | MS.gene32460:intron | 25.0% |
| !! | TTGAGTTTCCTTAAGTATTT+TGG | - | chr1.4:12144389-12144408 | MS.gene32460:CDS | 25.0% |
| !! | TTTGTTATCTTTGTTTCGTT+TGG | - | chr1.4:12139053-12139072 | MS.gene32460:intron | 25.0% |
| !!! | AAATTGTTTTTGAGAGCTTA+TGG | - | chr1.4:12139684-12139703 | MS.gene32460:CDS | 25.0% |
| !!! | AATTTTAAAACCAGTAGAAG+TGG | + | chr1.4:12140832-12140851 | None:intergenic | 25.0% |
| !!! | AGTTATATTCTTCTAGGATT+CGG | + | chr1.4:12143508-12143527 | None:intergenic | 25.0% |
| !!! | ATTTTAAAACCAGTAGAAGT+GGG | + | chr1.4:12140831-12140850 | None:intergenic | 25.0% |
| !!! | CTCTAGATTCTTACTTTTAT+TGG | + | chr1.4:12141735-12141754 | None:intergenic | 25.0% |
| !!! | CTTTTATTTTACCAGTTCAT+AGG | + | chr1.4:12139656-12139675 | None:intergenic | 25.0% |
| !!! | GAACTGTAATTGTATTGATT+TGG | + | chr1.4:12143434-12143453 | None:intergenic | 25.0% |
| !!! | GACTACAAACTCTTTTTTAA+AGG | + | chr1.4:12145133-12145152 | None:intergenic | 25.0% |
| !!! | GTTCATATAAGTTGTTTTCA+AGG | - | chr1.4:12139340-12139359 | MS.gene32460:intron | 25.0% |
| !!! | GTTGGTCTATGTTATAATTT+TGG | - | chr1.4:12140907-12140926 | MS.gene32460:intron | 25.0% |
| !!! | TAATTTCTTTTTTCCAGTTC+TGG | - | chr1.4:12141020-12141039 | MS.gene32460:intron | 25.0% |
| !!! | TGATACAATTTTAGTGTCTA+TGG | - | chr1.4:12139275-12139294 | MS.gene32460:intron | 25.0% |
| !!! | TGGAGTTTTTTAGTTGTTTT+TGG | - | chr1.4:12144333-12144352 | MS.gene32460:intron | 25.0% |
| !!! | TTATGATATATTGGCTTGAA+TGG | - | chr1.4:12141979-12141998 | MS.gene32460:intron | 25.0% |
| !!! | TTGCTTTTACCACAATAAAA+GGG | - | chr1.4:12140632-12140651 | MS.gene32460:intron | 25.0% |
| AAAACGTAAGAAAGACATGA+AGG | - | chr1.4:12143175-12143194 | MS.gene32460:intron | 30.0% | |
| AAAAGTAAGAATCTAGAGAG+AGG | - | chr1.4:12141737-12141756 | MS.gene32460:intron | 30.0% | |
| AAACAATGACAGTTCACATT+TGG | - | chr1.4:12143072-12143091 | MS.gene32460:intron | 30.0% | |
| AAACACAAGTACACAACAAA+AGG | + | chr1.4:12144236-12144255 | None:intergenic | 30.0% | |
| AAACACAGCCAAAATACTTA+AGG | + | chr1.4:12144400-12144419 | None:intergenic | 30.0% | |
| AAACGTAAGAAAGACATGAA+GGG | - | chr1.4:12143176-12143195 | MS.gene32460:intron | 30.0% | |
| AAAGTAAGAATCTAGAGAGA+GGG | - | chr1.4:12141738-12141757 | MS.gene32460:intron | 30.0% | |
| AAATCAATACGGTAATACGA+CGG | + | chr1.4:12144554-12144573 | None:intergenic | 30.0% | |
| AACAATGACAGTTCACATTT+GGG | - | chr1.4:12143073-12143092 | MS.gene32460:intron | 30.0% | |
| AACTAAAACGTGAGTGTTTA+GGG | + | chr1.4:12144075-12144094 | None:intergenic | 30.0% | |
| AAGAGAGTTGTGTTCTTTAA+CGG | + | chr1.4:12142885-12142904 | None:intergenic | 30.0% | |
| AATGAGATCATCAGTTAAAG+AGG | - | chr1.4:12143011-12143030 | MS.gene32460:intron | 30.0% | |
| AATGCAGGATATCTATTGTT+TGG | - | chr1.4:12141237-12141256 | MS.gene32460:intron | 30.0% | |
| ACTTATTTAAGCATGTCTAC+TGG | + | chr1.4:12139986-12140005 | None:intergenic | 30.0% | |
| AGACAAAGAAAATTCTGCTA+TGG | - | chr1.4:12145646-12145665 | MS.gene32460:CDS | 30.0% | |
| AGAGCTTATGAAATGTCTAT+TGG | + | chr1.4:12139937-12139956 | None:intergenic | 30.0% | |
| AGTATTGTAGCATATTAAGC+AGG | - | chr1.4:12142177-12142196 | MS.gene32460:intron | 30.0% | |
| AGTGCTTTATATGCAAGAAT+AGG | + | chr1.4:12141420-12141439 | None:intergenic | 30.0% | |
| ATATTATCACCTAACAGAAG+TGG | - | chr1.4:12142433-12142452 | MS.gene32460:intron | 30.0% | |
| ATGAAAAAGTAAGTTCACAG+TGG | - | chr1.4:12145392-12145411 | MS.gene32460:intron | 30.0% | |
| ATGAATACAAAAGATCTCAG+AGG | - | chr1.4:12145064-12145083 | MS.gene32460:intron | 30.0% | |
| CAAATCCCAAACAATTATGT+TGG | + | chr1.4:12144261-12144280 | None:intergenic | 30.0% | |
| CAATACTATATTCCATCACA+TGG | + | chr1.4:12142164-12142183 | None:intergenic | 30.0% | |
| CATAGAAACAATGCATTGTA+TGG | - | chr1.4:12141155-12141174 | MS.gene32460:intron | 30.0% | |
| CATGGAACTAGCATTATATA+AGG | - | chr1.4:12143239-12143258 | MS.gene32460:CDS | 30.0% | |
| CTAAATAATCAACACACAAG+TGG | + | chr1.4:12140359-12140378 | None:intergenic | 30.0% | |
| CTAGACAAATACATTCTAGT+TGG | - | chr1.4:12141504-12141523 | MS.gene32460:intron | 30.0% | |
| CTCAACTGATCAGTAAAATT+GGG | - | chr1.4:12140950-12140969 | MS.gene32460:intron | 30.0% | |
| GAAGGACATTATATTTGTGT+TGG | - | chr1.4:12140889-12140908 | MS.gene32460:intron | 30.0% | |
| GACTGAATATAATAACACTG+AGG | + | chr1.4:12141372-12141391 | None:intergenic | 30.0% | |
| GATGGAAAAGAGGAAAATAA+AGG | - | chr1.4:12140661-12140680 | MS.gene32460:intron | 30.0% | |
| GATTAAAACTTGCCTTGTAA+TGG | + | chr1.4:12140536-12140555 | None:intergenic | 30.0% | |
| GGCAATAATGAATTCTTCAA+AGG | + | chr1.4:12143659-12143678 | None:intergenic | 30.0% | |
| GTCATAAACAATCCATAAGT+GGG | + | chr1.4:12141459-12141478 | None:intergenic | 30.0% | |
| GTGTACAGTCAAGAAAATAT+TGG | + | chr1.4:12145335-12145354 | None:intergenic | 30.0% | |
| GTTTAGGTCCTTAGATTTAA+AGG | - | chr1.4:12140695-12140714 | MS.gene32460:intron | 30.0% | |
| TAAAAGTTCAAACACGTAGT+GGG | + | chr1.4:12140771-12140790 | None:intergenic | 30.0% | |
| TGGAAAAGAGGAAAATAAAG+GGG | - | chr1.4:12140663-12140682 | MS.gene32460:intron | 30.0% | |
| TGGAACTAGCATTATATAAG+GGG | - | chr1.4:12143241-12143260 | MS.gene32460:CDS | 30.0% | |
| TGGACATAAAATAATGCATG+TGG | + | chr1.4:12144468-12144487 | None:intergenic | 30.0% | |
| TGTCATAAACAATCCATAAG+TGG | + | chr1.4:12141460-12141479 | None:intergenic | 30.0% | |
| TTAAAAGTTCAAACACGTAG+TGG | + | chr1.4:12140772-12140791 | None:intergenic | 30.0% | |
| TTAAGCTGTTTATCCAAACA+GGG | - | chr1.4:12139630-12139649 | MS.gene32460:CDS | 30.0% | |
| TTAATGGGATATACTTAGCA+TGG | - | chr1.4:12141612-12141631 | MS.gene32460:intron | 30.0% | |
| TTATCCAAACAAGTATCCTT+GGG | - | chr1.4:12139885-12139904 | MS.gene32460:CDS | 30.0% | |
| TTGACAGTTATCTACGTAAA+TGG | - | chr1.4:12145492-12145511 | MS.gene32460:intron | 30.0% | |
| TTTAAGCTGTTTATCCAAAC+AGG | - | chr1.4:12139629-12139648 | MS.gene32460:CDS | 30.0% | |
| TTTATCCAAACAAGTATCCT+TGG | - | chr1.4:12139884-12139903 | MS.gene32460:CDS | 30.0% | |
| TTTCTTCTTTGTATCATCTG+TGG | + | chr1.4:12141882-12141901 | None:intergenic | 30.0% | |
| ! | AAAATCGTTGAAAGCTTTGA+AGG | + | chr1.4:12145091-12145110 | None:intergenic | 30.0% |
| ! | AACATTCATGGTCTCATTTT+GGG | - | chr1.4:12144966-12144985 | MS.gene32460:intron | 30.0% |
| ! | AGACAAATACATTCTAGTTG+GGG | - | chr1.4:12141506-12141525 | MS.gene32460:intron | 30.0% |
| ! | AGAGATACCAGTATTTTTCT+TGG | - | chr1.4:12138984-12139003 | MS.gene32460:intron | 30.0% |
| ! | CTTTTATTGTGGTAAAAGCA+AGG | + | chr1.4:12140633-12140652 | None:intergenic | 30.0% |
| ! | GAAAATAAAGGGGAGTTTTT+AGG | - | chr1.4:12140673-12140692 | MS.gene32460:intron | 30.0% |
| ! | GATTGACTTAATTGAGCTTA+TGG | - | chr1.4:12139372-12139391 | MS.gene32460:intron | 30.0% |
| ! | GATTTTATGAAAACAGCTCA+TGG | - | chr1.4:12139454-12139473 | MS.gene32460:intron | 30.0% |
| ! | TAACATTCATGGTCTCATTT+TGG | - | chr1.4:12144965-12144984 | MS.gene32460:intron | 30.0% |
| ! | TATGTTGACTGCCATTAAAA+TGG | - | chr1.4:12140265-12140284 | MS.gene32460:intron | 30.0% |
| ! | TCTCTTTTGTCCGTTAAAAA+AGG | - | chr1.4:12142899-12142918 | MS.gene32460:intron | 30.0% |
| ! | TCTTGCTTTGAATATCAACT+GGG | + | chr1.4:12145211-12145230 | None:intergenic | 30.0% |
| ! | TGCTTTTACCACAATAAAAG+GGG | - | chr1.4:12140633-12140652 | MS.gene32460:intron | 30.0% |
| ! | TTCTTTCTGTTCTTTTCTCA+AGG | + | chr1.4:12141938-12141957 | None:intergenic | 30.0% |
| ! | TTGTTAAGTATGCCATTTCT+GGG | - | chr1.4:12143686-12143705 | MS.gene32460:intron | 30.0% |
| ! | TTTAGTTGTGCTGACATATT+GGG | - | chr1.4:12140380-12140399 | MS.gene32460:intron | 30.0% |
| ! | TTTTGTCCGTTAAAAAAGGA+TGG | - | chr1.4:12142903-12142922 | MS.gene32460:intron | 30.0% |
| !! | ATCTTTCATGTTGCTTTGTT+AGG | - | chr1.4:12140553-12140572 | MS.gene32460:intron | 30.0% |
| !! | CTTGCTTTTACCACAATAAA+AGG | - | chr1.4:12140631-12140650 | MS.gene32460:intron | 30.0% |
| !! | GCTGTTTTCATATACTATCA+TGG | + | chr1.4:12139754-12139773 | None:intergenic | 30.0% |
| !! | TACTTTAAGTGTGTCATTTG+TGG | + | chr1.4:12142011-12142030 | None:intergenic | 30.0% |
| !! | TGTGTTATGGATTTGCTATT+TGG | - | chr1.4:12144313-12144332 | MS.gene32460:intron | 30.0% |
| !! | TTTTAGTTGTGCTGACATAT+TGG | - | chr1.4:12140379-12140398 | MS.gene32460:intron | 30.0% |
| !!! | TTTTAAAACCAGTAGAAGTG+GGG | + | chr1.4:12140830-12140849 | None:intergenic | 30.0% |
| AAAAGTTCAAACACGTAGTG+GGG | + | chr1.4:12140770-12140789 | None:intergenic | 35.0% | |
| AAACCTTGTTACAAAGCACA+TGG | + | chr1.4:12142402-12142421 | None:intergenic | 35.0% | |
| AAATGCCCTTTCTGTTATTC+CGG | - | chr1.4:12142065-12142084 | MS.gene32460:intron | 35.0% | |
| AAGTAAGAATCTAGAGAGAG+GGG | - | chr1.4:12141739-12141758 | MS.gene32460:intron | 35.0% | |
| AATAGAACTTTGCCCACTTA+TGG | - | chr1.4:12141444-12141463 | MS.gene32460:intron | 35.0% | |
| AATCAATACGGTAATACGAC+GGG | + | chr1.4:12144553-12144572 | None:intergenic | 35.0% | |
| AATTCACATTACGTGCATTG+TGG | - | chr1.4:12143310-12143329 | MS.gene32460:intron | 35.0% | |
| ACATTGCAACGGAATTAAAG+AGG | - | chr1.4:12144908-12144927 | MS.gene32460:intron | 35.0% | |
| ACTCATTCACTTAAACTAGC+AGG | + | chr1.4:12142123-12142142 | None:intergenic | 35.0% | |
| ACTCTTTGCCTTGAAATTGT+TGG | + | chr1.4:12142977-12142996 | None:intergenic | 35.0% | |
| ACTTCACAAGAACTACATCT+TGG | - | chr1.4:12144747-12144766 | MS.gene32460:intron | 35.0% | |
| AGAAATGCTGATGAGCAATT+GGG | - | chr1.4:12143107-12143126 | MS.gene32460:intron | 35.0% | |
| AGAGAGTTGTGTTCTTTAAC+GGG | + | chr1.4:12142884-12142903 | None:intergenic | 35.0% | |
| AGGTTGTTTAGTGTTCTGAT+AGG | - | chr1.4:12141791-12141810 | MS.gene32460:intron | 35.0% | |
| AGTTGTAATTAAGCCTGCAA+TGG | - | chr1.4:12144091-12144110 | MS.gene32460:intron | 35.0% | |
| ATAATGTCCTTCAAAGCAGT+AGG | + | chr1.4:12140881-12140900 | None:intergenic | 35.0% | |
| ATACAGTTGCTGAAATCATC+TGG | + | chr1.4:12142485-12142504 | None:intergenic | 35.0% | |
| ATCTATTGTTTGGATGCTGA+CGG | - | chr1.4:12141247-12141266 | MS.gene32460:intron | 35.0% | |
| ATGAGTGATAAGTGTCCTTT+AGG | - | chr1.4:12142687-12142706 | MS.gene32460:intron | 35.0% | |
| ATTACGATTGTTGTGGTTTC+AGG | - | chr1.4:12145574-12145593 | MS.gene32460:CDS | 35.0% | |
| ATTCACATTACGTGCATTGT+GGG | - | chr1.4:12143311-12143330 | MS.gene32460:intron | 35.0% | |
| CAAACATATAACACGAGCAA+AGG | - | chr1.4:12142568-12142587 | MS.gene32460:intron | 35.0% | |
| CAAAGAAAATTCTGCTATGG+AGG | - | chr1.4:12145649-12145668 | MS.gene32460:CDS | 35.0% | |
| CAAATCAATCATTCCAGAAC+TGG | + | chr1.4:12141036-12141055 | None:intergenic | 35.0% | |
| CAACTAAAACGTGAGTGTTT+AGG | + | chr1.4:12144076-12144095 | None:intergenic | 35.0% | |
| CAAGATGACGTTCGAAATAT+CGG | + | chr1.4:12138923-12138942 | None:intergenic | 35.0% | |
| CAATCTTCACACTAAACTCA+GGG | + | chr1.4:12142261-12142280 | None:intergenic | 35.0% | |
| CAATGTCATTAAGTGATAGG+AGG | - | chr1.4:12141703-12141722 | MS.gene32460:intron | 35.0% | |
| CAATTCAGAAAAGCAACACT+AGG | + | chr1.4:12141576-12141595 | None:intergenic | 35.0% | |
| CACAAATTAGTAGGCATAGT+GGG | + | chr1.4:12144128-12144147 | None:intergenic | 35.0% | |
| CCATGAACAGAAACAGAAAT+CGG | - | chr1.4:12143958-12143977 | MS.gene32460:intron | 35.0% | |
| CTAACAATCGGAGAACAAAT+CGG | + | chr1.4:12140460-12140479 | None:intergenic | 35.0% | |
| CTAATATCTCTTTACAAGCC+TGG | - | chr1.4:12144841-12144860 | MS.gene32460:intron | 35.0% | |
| CTAGCAACCAATAGACATTT+GGG | - | chr1.4:12142542-12142561 | MS.gene32460:intron | 35.0% | |
| CTATGATAAGCGATTATGCT+AGG | - | chr1.4:12139846-12139865 | MS.gene32460:CDS | 35.0% | |
| CTCTTTGCCTTGAAATTGTT+GGG | + | chr1.4:12142976-12142995 | None:intergenic | 35.0% | |
| CTTATTTACACAAACTCCCA+AGG | + | chr1.4:12139904-12139923 | None:intergenic | 35.0% | |
| CTTGAACGTTTCAACCATAT+GGG | - | chr1.4:12142843-12142862 | MS.gene32460:intron | 35.0% | |
| CTTGGGAGTTTGTGTAAATA+AGG | - | chr1.4:12139902-12139921 | MS.gene32460:intron | 35.0% | |
| GAGAGCTTATAGAGATATGT+TGG | + | chr1.4:12139732-12139751 | None:intergenic | 35.0% | |
| GAGCTTATGGAAACAACTTA+TGG | - | chr1.4:12139697-12139716 | MS.gene32460:CDS | 35.0% | |
| GATCTGAGTTCATTCTTTGT+TGG | + | chr1.4:12142380-12142399 | None:intergenic | 35.0% | |
| GCAAGAATATGACACAATTG+CGG | - | chr1.4:12142333-12142352 | MS.gene32460:intron | 35.0% | |
| GCATGTACGACTTTATGTTA+TGG | - | chr1.4:12144355-12144374 | MS.gene32460:intron | 35.0% | |
| GCTCAACTGATCAGTAAAAT+TGG | - | chr1.4:12140949-12140968 | MS.gene32460:intron | 35.0% | |
| GCTTATAGAGATATGTTGGA+AGG | + | chr1.4:12139728-12139747 | None:intergenic | 35.0% | |
| GGAACTAGCATTATATAAGG+GGG | - | chr1.4:12143242-12143261 | MS.gene32460:CDS | 35.0% | |
| GGAATACTATTTCAGTTCTG+AGG | + | chr1.4:12142944-12142963 | None:intergenic | 35.0% | |
| GGCAAAATGGAAATGTACAT+AGG | + | chr1.4:12144580-12144599 | None:intergenic | 35.0% | |
| GGCAAAGAGTGAATTAAACT+TGG | - | chr1.4:12142987-12143006 | MS.gene32460:intron | 35.0% | |
| GGCATACTTAACAACTCAAT+GGG | + | chr1.4:12143680-12143699 | None:intergenic | 35.0% | |
| GTCAATTCTTCATTGCCTAA+AGG | + | chr1.4:12142705-12142724 | None:intergenic | 35.0% | |
| GTGAAGATTGCAGAAACATT+TGG | - | chr1.4:12142271-12142290 | MS.gene32460:intron | 35.0% | |
| GTGATAGACTGTATATGTGA+AGG | - | chr1.4:12141771-12141790 | MS.gene32460:intron | 35.0% | |
| GTTATTCACGATTGGGAATT+CGG | - | chr1.4:12140040-12140059 | MS.gene32460:intron | 35.0% | |
| TAAAAAAGGATGGAGCCATT+TGG | - | chr1.4:12142913-12142932 | MS.gene32460:intron | 35.0% | |
| TAAAATTCTTCCTGTTCCTG+TGG | - | chr1.4:12140845-12140864 | MS.gene32460:intron | 35.0% | |
| TAGAAATGCTGATGAGCAAT+TGG | - | chr1.4:12143106-12143125 | MS.gene32460:intron | 35.0% | |
| TATGATAGAACCAAACCAAC+TGG | + | chr1.4:12141831-12141850 | None:intergenic | 35.0% | |
| TCTATGACCTTGAATTTGAG+AGG | + | chr1.4:12142217-12142236 | None:intergenic | 35.0% | |
| TGATAAACTCTCCACACTTT+GGG | + | chr1.4:12143152-12143171 | None:intergenic | 35.0% | |
| TGATGCTACTGACAAATTTC+TGG | + | chr1.4:12143599-12143618 | None:intergenic | 35.0% | |
| TGGAGAGTGATTTATGATGA+TGG | - | chr1.4:12142645-12142664 | MS.gene32460:intron | 35.0% | |
| TGGCAATACATAAACTCTCT+TGG | + | chr1.4:12144488-12144507 | None:intergenic | 35.0% | |
| TGGCATACTTAACAACTCAA+TGG | + | chr1.4:12143681-12143700 | None:intergenic | 35.0% | |
| TTATTCACGATTGGGAATTC+GGG | - | chr1.4:12140041-12140060 | MS.gene32460:intron | 35.0% | |
| TTATTGTTAGCCAGTTGGTT+TGG | - | chr1.4:12141818-12141837 | MS.gene32460:intron | 35.0% | |
| TTGCTCGTGTTATATGTTTG+AGG | + | chr1.4:12142568-12142587 | None:intergenic | 35.0% | |
| ! | AATTCGGGAGTATACTAAAG+TGG | - | chr1.4:12140056-12140075 | MS.gene32460:intron | 35.0% |
| ! | GTCTTGCTTTGAATATCAAC+TGG | + | chr1.4:12145212-12145231 | None:intergenic | 35.0% |
| ! | GTTGTTAAGTATGCCATTTC+TGG | - | chr1.4:12143685-12143704 | MS.gene32460:intron | 35.0% |
| ! | TATTTTGCCGTCATCATTCA+TGG | + | chr1.4:12144623-12144642 | None:intergenic | 35.0% |
| ! | TGCAGCAAATTCCTTTTTAC+CGG | + | chr1.4:12143782-12143801 | None:intergenic | 35.0% |
| !! | GCTGTTTTCATTAGCTATCT+TGG | + | chr1.4:12139520-12139539 | None:intergenic | 35.0% |
| !! | TTTCTGTTTCTGTTCATGGA+CGG | + | chr1.4:12143957-12143976 | None:intergenic | 35.0% |
| !!! | AAAGGGGAGTTTTTAGGTTT+AGG | - | chr1.4:12140679-12140698 | MS.gene32460:intron | 35.0% |
| !!! | ATGGCTCCATCCTTTTTTAA+CGG | + | chr1.4:12142912-12142931 | None:intergenic | 35.0% |
| !!! | GGCTGTTTCTCTTTTTGATT+AGG | - | chr1.4:12140077-12140096 | MS.gene32460:intron | 35.0% |
| AACTCCCAAGGATACTTGTT+TGG | + | chr1.4:12139892-12139911 | None:intergenic | 40.0% | |
| AACTTGCCTTGTAATGGTGT+CGG | + | chr1.4:12140530-12140549 | None:intergenic | 40.0% | |
| AAGTGGAGCAGAAATTTCCT+TGG | - | chr1.4:12142450-12142469 | MS.gene32460:intron | 40.0% | |
| ACAATAAAAGGGGACTTGGA+TGG | - | chr1.4:12140643-12140662 | MS.gene32460:intron | 40.0% | |
| ACAATGCATTGTATGGTGTG+AGG | - | chr1.4:12141162-12141181 | MS.gene32460:intron | 40.0% | |
| AGCAAGTCAATAAGGAGAAG+AGG | - | chr1.4:12144683-12144702 | MS.gene32460:intron | 40.0% | |
| ATATCTCTTTACAAGCCTGG+TGG | - | chr1.4:12144844-12144863 | MS.gene32460:intron | 40.0% | |
| ATCCAGAACGATTGTCACAT+GGG | + | chr1.4:12144809-12144828 | None:intergenic | 40.0% | |
| ATGCTGCAAAGTTCCAACAA+TGG | - | chr1.4:12142769-12142788 | MS.gene32460:intron | 40.0% | |
| ATGGATTCTTCTTCTGCAGT+AGG | + | chr1.4:12144778-12144797 | None:intergenic | 40.0% | |
| ATTTCCAGTTTCCACCCATA+TGG | + | chr1.4:12142860-12142879 | None:intergenic | 40.0% | |
| ATTTCTGCTCCACTTCTGTT+AGG | + | chr1.4:12142445-12142464 | None:intergenic | 40.0% | |
| CAAAAGGTTGCACAAGATGA+TGG | + | chr1.4:12144220-12144239 | None:intergenic | 40.0% | |
| CACTTTGGTAGAGTTCAAAG+AGG | + | chr1.4:12140746-12140765 | None:intergenic | 40.0% | |
| CATGTTGCAGAAGGAAAACA+TGG | - | chr1.4:12142625-12142644 | MS.gene32460:intron | 40.0% | |
| CATTCACTTAAACTAGCAGG+TGG | + | chr1.4:12142120-12142139 | None:intergenic | 40.0% | |
| CCACAAATTAGTAGGCATAG+TGG | + | chr1.4:12144129-12144148 | None:intergenic | 40.0% | |
| CCACTATGCCTACTAATTTG+TGG | - | chr1.4:12144126-12144145 | MS.gene32460:intron | 40.0% | |
| CCTAGCAACCAATAGACATT+TGG | - | chr1.4:12142541-12142560 | MS.gene32460:intron | 40.0% | |
| CTGATAAACTCTCCACACTT+TGG | + | chr1.4:12143153-12143172 | None:intergenic | 40.0% | |
| GAACAGAAACAGAAATCGGT+GGG | - | chr1.4:12143962-12143981 | MS.gene32460:intron | 40.0% | |
| GACAAAGGAGCAAGTCAATA+AGG | - | chr1.4:12144675-12144694 | MS.gene32460:intron | 40.0% | |
| GAGAGTTGTGTTCTTTAACG+GGG | + | chr1.4:12142883-12142902 | None:intergenic | 40.0% | |
| GAGTTCATTCTTTGTTGGAG+AGG | + | chr1.4:12142375-12142394 | None:intergenic | 40.0% | |
| GATCCATGTGCTTTGTAACA+AGG | - | chr1.4:12142396-12142415 | MS.gene32460:intron | 40.0% | |
| GCAATCTTCACACTAAACTC+AGG | + | chr1.4:12142262-12142281 | None:intergenic | 40.0% | |
| GCATGCGATTTAAACTTCCA+TGG | + | chr1.4:12143885-12143904 | None:intergenic | 40.0% | |
| GCTGAATCTATTCGTTCTGA+TGG | - | chr1.4:12138942-12138961 | MS.gene32460:intron | 40.0% | |
| GCTTGAACGTTTCAACCATA+TGG | - | chr1.4:12142842-12142861 | MS.gene32460:intron | 40.0% | |
| GGGCTCAGTTATATTCTTCT+AGG | + | chr1.4:12143514-12143533 | None:intergenic | 40.0% | |
| GGTAAGCTTACACATTGCAA+CGG | - | chr1.4:12144897-12144916 | MS.gene32460:intron | 40.0% | |
| GGTCATAGAGTAACCTAAAG+AGG | - | chr1.4:12142228-12142247 | MS.gene32460:intron | 40.0% | |
| GGTTGAATAATAGCACAGCA+TGG | + | chr1.4:12142511-12142530 | None:intergenic | 40.0% | |
| GTACTCATGTCTGATGAAGA+TGG | - | chr1.4:12144643-12144662 | MS.gene32460:intron | 40.0% | |
| GTCTGTTATTGTTAGCCAGT+TGG | - | chr1.4:12141813-12141832 | MS.gene32460:intron | 40.0% | |
| GTCTGTTCAGGTGTTTGAAA+TGG | - | chr1.4:12143823-12143842 | MS.gene32460:intron | 40.0% | |
| TAAACTTCCATGGTATCCAC+AGG | + | chr1.4:12143875-12143894 | None:intergenic | 40.0% | |
| TACCACAATAAAAGGGGACT+TGG | - | chr1.4:12140639-12140658 | MS.gene32460:intron | 40.0% | |
| TATCCAGAACGATTGTCACA+TGG | + | chr1.4:12144810-12144829 | None:intergenic | 40.0% | |
| TATCTCTTTACAAGCCTGGT+GGG | - | chr1.4:12144845-12144864 | MS.gene32460:intron | 40.0% | |
| TCTACTCTGCGTTTGCATTT+GGG | - | chr1.4:12140177-12140196 | MS.gene32460:intron | 40.0% | |
| TCTATTGTTTGGATGCTGAC+GGG | - | chr1.4:12141248-12141267 | MS.gene32460:intron | 40.0% | |
| TCTTGTGAAGATTGGATCCA+CGG | - | chr1.4:12140127-12140146 | MS.gene32460:intron | 40.0% | |
| TGAACAGAAACAGAAATCGG+TGG | - | chr1.4:12143961-12143980 | MS.gene32460:intron | 40.0% | |
| TGCAGAAGAAGAATCCATAG+TGG | - | chr1.4:12144780-12144799 | MS.gene32460:intron | 40.0% | |
| TGGAAGTTTAAATCGCATGC+AGG | - | chr1.4:12143885-12143904 | MS.gene32460:intron | 40.0% | |
| TTCAGAAAAGCAACACTAGG+AGG | + | chr1.4:12141573-12141592 | None:intergenic | 40.0% | |
| TTCATTCTTTGTTGGAGAGG+AGG | + | chr1.4:12142372-12142391 | None:intergenic | 40.0% | |
| TTGCAATGTGTAAGCTTACC+TGG | + | chr1.4:12144897-12144916 | None:intergenic | 40.0% | |
| TTTGCCTTGAAATTGTTGGG+TGG | + | chr1.4:12142973-12142992 | None:intergenic | 40.0% | |
| ! | ACAAGTGGCAAAGTTGGTTA+GGG | + | chr1.4:12140344-12140363 | None:intergenic | 40.0% |
| ! | ACAATCGTTCTGGATACATC+TGG | - | chr1.4:12144814-12144833 | MS.gene32460:intron | 40.0% |
| ! | ACGGGATGACAGCAATTTTA+AGG | + | chr1.4:12144535-12144554 | None:intergenic | 40.0% |
| ! | AGGAATTTGCACTGGCAAAA+TGG | + | chr1.4:12144593-12144612 | None:intergenic | 40.0% |
| ! | ATCCAAGTCCCCTTTTATTG+TGG | + | chr1.4:12140644-12140663 | None:intergenic | 40.0% |
| ! | ATTGAGCTTATGGGCTTGTT+TGG | - | chr1.4:12139382-12139401 | MS.gene32460:intron | 40.0% |
| ! | CATGTTTTCCTTCTGCAACA+TGG | + | chr1.4:12142627-12142646 | None:intergenic | 40.0% |
| ! | CCAAATGTCTATTGGTTGCT+AGG | + | chr1.4:12142544-12142563 | None:intergenic | 40.0% |
| ! | CGATTTGTTCTCCGATTGTT+AGG | - | chr1.4:12140458-12140477 | MS.gene32460:intron | 40.0% |
| ! | GTATCTCTAGCTTCTCTAAG+CGG | + | chr1.4:12138972-12138991 | None:intergenic | 40.0% |
| ! | TACCTGGATAGCAGAAGTAT+AGG | + | chr1.4:12144881-12144900 | None:intergenic | 40.0% |
| ! | TCTAGGATTCGGTTTCTGAT+GGG | + | chr1.4:12143497-12143516 | None:intergenic | 40.0% |
| ! | TTTGAGGCCCAAATGTCTAT+TGG | + | chr1.4:12142552-12142571 | None:intergenic | 40.0% |
| !! | ACAATCTCCCAAAAGCACTA+AGG | + | chr1.4:12143339-12143358 | None:intergenic | 40.0% |
| !! | CCGATTTCTGTTTCTGTTCA+TGG | + | chr1.4:12143961-12143980 | None:intergenic | 40.0% |
| !! | GAGTGATTTATGATGATGGC+TGG | - | chr1.4:12142649-12142668 | MS.gene32460:intron | 40.0% |
| !! | GGTAAAAAGGAATTTGCTGC+AGG | - | chr1.4:12143781-12143800 | MS.gene32460:intron | 40.0% |
| !! | TTCTAGGATTCGGTTTCTGA+TGG | + | chr1.4:12143498-12143517 | None:intergenic | 40.0% |
| AAAACCAGTAGAAGTGGGGT+GGG | + | chr1.4:12140826-12140845 | None:intergenic | 45.0% | |
| AAAATGGCACCTGTTGTTGG+AGG | - | chr1.4:12143741-12143760 | MS.gene32460:intron | 45.0% | |
| AACCCATGTGACAATCGTTC+TGG | - | chr1.4:12144804-12144823 | MS.gene32460:intron | 45.0% | |
| AACCTAGTCCATGTTGCAGA+AGG | - | chr1.4:12142616-12142635 | MS.gene32460:intron | 45.0% | |
| AAGAATCTAGAGAGAGGGGA+GGG | - | chr1.4:12141743-12141762 | MS.gene32460:intron | 45.0% | |
| AATGGACATGCCGCATAAGT+GGG | - | chr1.4:12142787-12142806 | MS.gene32460:intron | 45.0% | |
| ACAATCGGAGAACAAATCGG+AGG | + | chr1.4:12140457-12140476 | None:intergenic | 45.0% | |
| ACAGCTCATGGCATGTTCAT+AGG | - | chr1.4:12139466-12139485 | MS.gene32460:intron | 45.0% | |
| ACGACCACCCAACAATTTCA+AGG | - | chr1.4:12142966-12142985 | MS.gene32460:intron | 45.0% | |
| ACGTTCAAGCTCATCAAGCA+TGG | + | chr1.4:12142832-12142851 | None:intergenic | 45.0% | |
| AGAAAAGCAACACTAGGAGG+TGG | + | chr1.4:12141570-12141589 | None:intergenic | 45.0% | |
| AGACATGAAGGGTAATGACG+TGG | - | chr1.4:12143187-12143206 | MS.gene32460:intron | 45.0% | |
| AGAGAGAGAACAGAACAGTC+CGG | + | chr1.4:12143998-12144017 | None:intergenic | 45.0% | |
| AGATGGACAGAAGCAGACAA+AGG | - | chr1.4:12144660-12144679 | MS.gene32460:intron | 45.0% | |
| AGCTGCCGGAATAACAGAAA+GGG | + | chr1.4:12142073-12142092 | None:intergenic | 45.0% | |
| AGTTGTCCGACACCATTACA+AGG | - | chr1.4:12140521-12140540 | MS.gene32460:intron | 45.0% | |
| ATAGCAGAGAGACCATGTGA+TGG | - | chr1.4:12142149-12142168 | MS.gene32460:intron | 45.0% | |
| ATGAAGGGTAATGACGTGGA+GGG | - | chr1.4:12143191-12143210 | MS.gene32460:intron | 45.0% | |
| CAACACACAAGTGGCAAAGT+TGG | + | chr1.4:12140350-12140369 | None:intergenic | 45.0% | |
| CAAGGTTCATAGTGCGACTT+TGG | + | chr1.4:12140615-12140634 | None:intergenic | 45.0% | |
| CATGGAATGCATGTGATGCA+TGG | - | chr1.4:12143221-12143240 | MS.gene32460:CDS | 45.0% | |
| CTTCACTCTTTGCCTAGTCA+AGG | + | chr1.4:12145609-12145628 | None:intergenic | 45.0% | |
| CTTGACTAGGCAAAGAGTGA+AGG | - | chr1.4:12145607-12145626 | MS.gene32460:CDS | 45.0% | |
| GAACCTAAATAACCCTCGTC+TGG | + | chr1.4:12140317-12140336 | None:intergenic | 45.0% | |
| GAACGTTTCAACCATATGGG+TGG | - | chr1.4:12142846-12142865 | MS.gene32460:intron | 45.0% | |
| GACAACTGCTTTGACACAAC+CGG | + | chr1.4:12140508-12140527 | None:intergenic | 45.0% | |
| GAGAAAATGGCACCTGTTGT+TGG | - | chr1.4:12143738-12143757 | MS.gene32460:intron | 45.0% | |
| GCAACGAATCTGTGTGTACT+GGG | + | chr1.4:12144159-12144178 | None:intergenic | 45.0% | |
| GCAGAAACATTTGGCAGAGA+GGG | - | chr1.4:12142280-12142299 | MS.gene32460:intron | 45.0% | |
| GCAGAGAGGGATTGATTAGA+GGG | - | chr1.4:12142293-12142312 | MS.gene32460:intron | 45.0% | |
| GCATTATATAAGGGGGACAG+TGG | - | chr1.4:12143249-12143268 | MS.gene32460:CDS | 45.0% | |
| GCTGTAGCCATGAATGATGA+CGG | - | chr1.4:12144613-12144632 | MS.gene32460:intron | 45.0% | |
| GGAAGTTATGACTCCTTCCT+TGG | - | chr1.4:12140286-12140305 | MS.gene32460:intron | 45.0% | |
| GGAGGATTTGTCGTCTGAAA+TGG | - | chr1.4:12138866-12138885 | MS.gene32460:CDS | 45.0% | |
| GGTGAAAAACTAGCCATTGC+AGG | + | chr1.4:12144107-12144126 | None:intergenic | 45.0% | |
| GGTGATTAGGACCGGTAAAA+AGG | - | chr1.4:12143768-12143787 | MS.gene32460:intron | 45.0% | |
| GTCTACTCTGCGTTTGCATT+TGG | - | chr1.4:12140176-12140195 | MS.gene32460:intron | 45.0% | |
| TAAAACCAGTAGAAGTGGGG+TGG | + | chr1.4:12140827-12140846 | None:intergenic | 45.0% | |
| TAAGAATCTAGAGAGAGGGG+AGG | - | chr1.4:12141742-12141761 | MS.gene32460:intron | 45.0% | |
| TCAACCATATGGGTGGAAAC+TGG | - | chr1.4:12142853-12142872 | MS.gene32460:intron | 45.0% | |
| TCACCAGACGAGGGTTATTT+AGG | - | chr1.4:12140311-12140330 | MS.gene32460:intron | 45.0% | |
| TCAGGGTTCTTGACCTCTTT+AGG | + | chr1.4:12142244-12142263 | None:intergenic | 45.0% | |
| TCAGTAGCATCAAAGCCAGA+TGG | - | chr1.4:12143607-12143626 | MS.gene32460:intron | 45.0% | |
| TCATCATTCATGGCTACAGC+AGG | + | chr1.4:12144613-12144632 | None:intergenic | 45.0% | |
| TCATCTGGATTACGAGACCA+AGG | + | chr1.4:12142470-12142489 | None:intergenic | 45.0% | |
| TCTGCTATGGAGGTTGAGTA+GGG | - | chr1.4:12145659-12145678 | MS.gene32460:CDS | 45.0% | |
| TGACGTTCGAAATATCGGAG+CGG | + | chr1.4:12138918-12138937 | None:intergenic | 45.0% | |
| TGATTTGAGAGAGCTGTCCT+TGG | - | chr1.4:12141049-12141068 | MS.gene32460:intron | 45.0% | |
| TGCAACGAATCTGTGTGTAC+TGG | + | chr1.4:12144160-12144179 | None:intergenic | 45.0% | |
| TGCAGAAACATTTGGCAGAG+AGG | - | chr1.4:12142279-12142298 | MS.gene32460:intron | 45.0% | |
| TGCATAAGCACTTGTGACAC+TGG | - | chr1.4:12139430-12139449 | MS.gene32460:intron | 45.0% | |
| TGCCTATACTTCTGCTATCC+AGG | - | chr1.4:12144876-12144895 | MS.gene32460:intron | 45.0% | |
| TGGGTCCTTGAAAGCTTCAA+AGG | + | chr1.4:12145192-12145211 | None:intergenic | 45.0% | |
| TGTCACATGGGTTTCCACTA+TGG | + | chr1.4:12144797-12144816 | None:intergenic | 45.0% | |
| TGTTCCAAATGCTGCTGCAA+CGG | - | chr1.4:12138845-12138864 | MS.gene32460:CDS | 45.0% | |
| TGTTGGAGGCAATGGTGATT+AGG | - | chr1.4:12143755-12143774 | MS.gene32460:intron | 45.0% | |
| TTATGCGGCATGTCCATTGT+TGG | + | chr1.4:12142785-12142804 | None:intergenic | 45.0% | |
| TTCCTTCTGCAACATGGACT+AGG | + | chr1.4:12142621-12142640 | None:intergenic | 45.0% | |
| TTCTGCTATGGAGGTTGAGT+AGG | - | chr1.4:12145658-12145677 | MS.gene32460:CDS | 45.0% | |
| TTTCCTGCCTACTGCTTTGA+AGG | - | chr1.4:12140871-12140890 | MS.gene32460:intron | 45.0% | |
| TTTCTACGAGCCCACTTATG+CGG | + | chr1.4:12142800-12142819 | None:intergenic | 45.0% | |
| ! | AAGTATGCCATTTCTGGGTG+AGG | - | chr1.4:12143691-12143710 | MS.gene32460:intron | 45.0% |
| ! | CACAAGTGGCAAAGTTGGTT+AGG | + | chr1.4:12140345-12140364 | None:intergenic | 45.0% |
| ! | GAGAACAAATCGGAGGCATA+TGG | + | chr1.4:12140450-12140469 | None:intergenic | 45.0% |
| ! | GCAGAAGTATAGGCAAGAAC+TGG | + | chr1.4:12144871-12144890 | None:intergenic | 45.0% |
| ! | GTGCTGTTGCATCTGCTAAT+GGG | - | chr1.4:12140099-12140118 | MS.gene32460:intron | 45.0% |
| !! | GAGGTCCTTTGAAGCTTTCA+AGG | - | chr1.4:12145184-12145203 | MS.gene32460:intron | 45.0% |
| !! | GGTTGCACAAGATGATGGAA+AGG | + | chr1.4:12144215-12144234 | None:intergenic | 45.0% |
| !! | TTCTGCAACATGGACTAGGT+TGG | + | chr1.4:12142617-12142636 | None:intergenic | 45.0% |
| !!! | ATAGTTTTTATTTAATTAAA+AGG | - | chr1.4:12141642-12141661 | MS.gene32460:intron | 5.0% |
| AAACCAGTAGAAGTGGGGTG+GGG | + | chr1.4:12140825-12140844 | None:intergenic | 50.0% | |
| AAGGATGGAGCCATTTGGCT+TGG | - | chr1.4:12142918-12142937 | MS.gene32460:intron | 50.0% | |
| ACCAGTTCATAGGCCCTGTT+TGG | + | chr1.4:12139646-12139665 | None:intergenic | 50.0% | |
| AGCTGCATGGATGGCTTACT+TGG | - | chr1.4:12141082-12141101 | MS.gene32460:intron | 50.0% | |
| AGGACTGTGTTGCCTTGACT+AGG | - | chr1.4:12145594-12145613 | MS.gene32460:CDS | 50.0% | |
| AGGGGACTTGGATGGAAAAG+AGG | - | chr1.4:12140651-12140670 | MS.gene32460:intron | 50.0% | |
| AGTAGGCAGGAAATCACCAC+AGG | + | chr1.4:12140864-12140883 | None:intergenic | 50.0% | |
| ATAACTGAGCCCTCCAAACC+AGG | - | chr1.4:12143522-12143541 | MS.gene32460:intron | 50.0% | |
| CAAGAAGCCTGTGGATACCA+TGG | - | chr1.4:12143865-12143884 | MS.gene32460:intron | 50.0% | |
| CAATGGACATGCCGCATAAG+TGG | - | chr1.4:12142786-12142805 | MS.gene32460:intron | 50.0% | |
| CAGCTGCCGGAATAACAGAA+AGG | + | chr1.4:12142074-12142093 | None:intergenic | 50.0% | |
| CAGGAAATCACCACAGGAAC+AGG | + | chr1.4:12140858-12140877 | None:intergenic | 50.0% | |
| CATGAAGGGTAATGACGTGG+AGG | - | chr1.4:12143190-12143209 | MS.gene32460:intron | 50.0% | |
| CGAAATATCGGAGCGGGAAA+AGG | + | chr1.4:12138911-12138930 | None:intergenic | 50.0% | |
| CGGTCACAATGTGCAGGTAA+TGG | - | chr1.4:12143630-12143649 | MS.gene32460:intron | 50.0% | |
| CTCTTGACCTCACCCAGAAA+TGG | + | chr1.4:12143701-12143720 | None:intergenic | 50.0% | |
| GAAATTGTTGGGTGGTCGTC+AGG | + | chr1.4:12142965-12142984 | None:intergenic | 50.0% | |
| GACGTTCGAAATATCGGAGC+GGG | + | chr1.4:12138917-12138936 | None:intergenic | 50.0% | |
| GAGGCAATGGTGATTAGGAC+CGG | - | chr1.4:12143760-12143779 | MS.gene32460:intron | 50.0% | |
| GCTACAGCAGGAATTTGCAC+TGG | + | chr1.4:12144601-12144620 | None:intergenic | 50.0% | |
| GGCAGAGAGGGATTGATTAG+AGG | - | chr1.4:12142292-12142311 | MS.gene32460:intron | 50.0% | |
| GGGTCAGCTCTTGTGAAGAT+TGG | - | chr1.4:12140119-12140138 | MS.gene32460:intron | 50.0% | |
| GTAGCATCAAAGCCAGATGG+CGG | - | chr1.4:12143610-12143629 | MS.gene32460:intron | 50.0% | |
| GTTCTCTCTCTCGCATCTCT+GGG | - | chr1.4:12144007-12144026 | MS.gene32460:CDS | 50.0% | |
| TCACCATTGCCTCCAACAAC+AGG | + | chr1.4:12143753-12143772 | None:intergenic | 50.0% | |
| TCCAAACAGGGCCTATGAAC+TGG | - | chr1.4:12139642-12139661 | MS.gene32460:CDS | 50.0% | |
| TCTGCGATCATGCTACCTCT+AGG | - | chr1.4:12143926-12143945 | MS.gene32460:intron | 50.0% | |
| TCTGTTATTCCGGCAGCTGA+CGG | - | chr1.4:12142075-12142094 | MS.gene32460:intron | 50.0% | |
| TGGTGGAAAAGCTGCATGGA+TGG | - | chr1.4:12141073-12141092 | MS.gene32460:intron | 50.0% | |
| TGGTTGCTAGGCATAGCATG+AGG | + | chr1.4:12142532-12142551 | None:intergenic | 50.0% | |
| TGTCCTTCAAAGCAGTAGGC+AGG | + | chr1.4:12140877-12140896 | None:intergenic | 50.0% | |
| TGTTCTCCGATTGTTAGGCC+TGG | - | chr1.4:12140463-12140482 | MS.gene32460:intron | 50.0% | |
| TGTTCTCTCTCTCGCATCTC+TGG | - | chr1.4:12144006-12144025 | MS.gene32460:CDS | 50.0% | |
| TTGAGAGAGCTGTCCTTGGT+TGG | - | chr1.4:12141053-12141072 | MS.gene32460:intron | 50.0% | |
| TTTCTGGGTGAGGTCAAGAG+TGG | - | chr1.4:12143701-12143720 | MS.gene32460:intron | 50.0% | |
| TTTGACCTGCAAGAAGCCTG+TGG | - | chr1.4:12143856-12143875 | MS.gene32460:intron | 50.0% | |
| ! | AACACGTAGTGGGGTCACTT+TGG | + | chr1.4:12140761-12140780 | None:intergenic | 50.0% |
| ! | AAGGTGAAGCGCTTGTCATC+TGG | - | chr1.4:12142587-12142606 | MS.gene32460:intron | 50.0% |
| ! | ATCGGTGGGATCTTTTGTGC+CGG | - | chr1.4:12143976-12143995 | MS.gene32460:intron | 50.0% |
| ! | CGGAGGCATATGGAAGTCTA+TGG | + | chr1.4:12140440-12140459 | None:intergenic | 50.0% |
| ! | GTGGGAGCCTTAGTGCTTTT+GGG | - | chr1.4:12143329-12143348 | MS.gene32460:intron | 50.0% |
| ! | TGCAGCTTTTCCACCAACCA+AGG | + | chr1.4:12141069-12141088 | None:intergenic | 50.0% |
| ! | TGTGGGAGCCTTAGTGCTTT+TGG | - | chr1.4:12143328-12143347 | MS.gene32460:intron | 50.0% |
| !! | AGTTCTGAGGCCAAGCCAAA+TGG | + | chr1.4:12142931-12142950 | None:intergenic | 50.0% |
| !! | GGTGCTGTTGCATCTGCTAA+TGG | - | chr1.4:12140098-12140117 | MS.gene32460:intron | 50.0% |
| !! | TGATGGCTGGTTTGAGAAGC+AGG | - | chr1.4:12142662-12142681 | MS.gene32460:intron | 50.0% |
| !! | TGGTTGGTGGAAAAGCTGCA+TGG | - | chr1.4:12141069-12141088 | MS.gene32460:intron | 50.0% |
| AACCAGTAGAAGTGGGGTGG+GGG | + | chr1.4:12140824-12140843 | None:intergenic | 55.0% | |
| AGAGAGCTGTCCTTGGTTGG+TGG | - | chr1.4:12141056-12141075 | MS.gene32460:intron | 55.0% | |
| AGGCCCAAGTTGCCTGTTTG+GGG | - | chr1.4:12143542-12143561 | MS.gene32460:intron | 55.0% | |
| CAGGCCCAAGTTGCCTGTTT+GGG | - | chr1.4:12143541-12143560 | MS.gene32460:intron | 55.0% | |
| CCTGAACAGACACCATGTCC+AGG | + | chr1.4:12143814-12143833 | None:intergenic | 55.0% | |
| CCTGGACATGGTGTCTGTTC+AGG | - | chr1.4:12143811-12143830 | MS.gene32460:intron | 55.0% | |
| GAACAGACACCATGTCCAGG+TGG | + | chr1.4:12143811-12143830 | None:intergenic | 55.0% | |
| GACCCCCAAACAGGCAACTT+GGG | + | chr1.4:12143548-12143567 | None:intergenic | 55.0% | |
| GACGTGGAGGGAATGATGCA+TGG | - | chr1.4:12143203-12143222 | MS.gene32460:CDS | 55.0% | |
| GCACCTGTTGTTGGAGGCAA+TGG | - | chr1.4:12143747-12143766 | MS.gene32460:intron | 55.0% | |
| GGTATCCACAGGCTTCTTGC+AGG | + | chr1.4:12143864-12143883 | None:intergenic | 55.0% | |
| TCATGGACGGACACTCCTAG+AGG | + | chr1.4:12143944-12143963 | None:intergenic | 55.0% | |
| TCCAAATGCTGCTGCAACGG+AGG | - | chr1.4:12138848-12138867 | MS.gene32460:CDS | 55.0% | |
| TCCTCCGTTGCAGCAGCATT+TGG | + | chr1.4:12138852-12138871 | None:intergenic | 55.0% | |
| TCCTTGGAGTCACCAGACGA+GGG | - | chr1.4:12140302-12140321 | MS.gene32460:intron | 55.0% | |
| TCGTCTGGTGACTCCAAGGA+AGG | + | chr1.4:12140302-12140321 | None:intergenic | 55.0% | |
| TGCACATTGTGACCGCCATC+TGG | + | chr1.4:12143625-12143644 | None:intergenic | 55.0% | |
| TGCAGCATGCGACTCTCATC+AGG | + | chr1.4:12142757-12142776 | None:intergenic | 55.0% | |
| TTCCTTGGAGTCACCAGACG+AGG | - | chr1.4:12140301-12140320 | MS.gene32460:intron | 55.0% | |
| ! | AGATGGCGGTCACAATGTGC+AGG | - | chr1.4:12143624-12143643 | MS.gene32460:intron | 55.0% |
| ! | GCTCTTTTGGACCCCCAAAC+AGG | + | chr1.4:12143557-12143576 | None:intergenic | 55.0% |
| !! | CAACTTGGGCCTGGTTTGGA+GGG | + | chr1.4:12143534-12143553 | None:intergenic | 55.0% |
| ACCCTCGTCTGGTGACTCCA+AGG | + | chr1.4:12140306-12140325 | None:intergenic | 60.0% | |
| AGCAGGTGGTTGTGCTGAGC+TGG | + | chr1.4:12142106-12142125 | None:intergenic | 60.0% | |
| CAGGCAACTTGGGCCTGGTT+TGG | + | chr1.4:12143538-12143557 | None:intergenic | 60.0% | |
| CCAAACAGGCAACTTGGGCC+TGG | + | chr1.4:12143543-12143562 | None:intergenic | 60.0% | |
| CCAGGCCCAAGTTGCCTGTT+TGG | - | chr1.4:12143540-12143559 | MS.gene32460:intron | 60.0% | |
| CTCCGATTGTTAGGCCTGGC+AGG | - | chr1.4:12140467-12140486 | MS.gene32460:intron | 60.0% | |
| CTCTCGCATCTCTGGGTTCG+CGG | - | chr1.4:12144014-12144033 | MS.gene32460:CDS | 60.0% | |
| CTGGCATTTCCGTCAGCTGC+CGG | + | chr1.4:12142087-12142106 | None:intergenic | 60.0% | |
| GCATGCGACTCTCATCAGGC+AGG | + | chr1.4:12142753-12142772 | None:intergenic | 60.0% | |
| GGACCCCCAAACAGGCAACT+TGG | + | chr1.4:12143549-12143568 | None:intergenic | 60.0% | |
| GGCCCAAGTTGCCTGTTTGG+GGG | - | chr1.4:12143543-12143562 | MS.gene32460:intron | 60.0% | |
| GGCCTGCCAGGCCTAACAAT+CGG | + | chr1.4:12140472-12140491 | None:intergenic | 60.0% | |
| TAGGCAAGAACTGGCCCACC+AGG | + | chr1.4:12144862-12144881 | None:intergenic | 60.0% | |
| TCTCGCATCTCTGGGTTCGC+GGG | - | chr1.4:12144015-12144034 | MS.gene32460:CDS | 60.0% | |
| TTCCCCCACCCCACTTCTAC+TGG | - | chr1.4:12140819-12140838 | MS.gene32460:intron | 60.0% | |
| TTTGCTGCAGGACTGCCACC+TGG | - | chr1.4:12143793-12143812 | MS.gene32460:intron | 60.0% | |
| ! | ACAACCGGCTCTGCTTCAGC+AGG | + | chr1.4:12140493-12140512 | None:intergenic | 60.0% |
| !! | GCAACTTGGGCCTGGTTTGG+AGG | + | chr1.4:12143535-12143554 | None:intergenic | 60.0% |
| CAGGCCTGCTGAAGCAGAGC+CGG | - | chr1.4:12140486-12140505 | MS.gene32460:intron | 65.0% | |
| CTAGAGAGAGGGGAGGGCGA+GGG | - | chr1.4:12141749-12141768 | MS.gene32460:intron | 65.0% | |
| GCAGGACTGCCACCTGGACA+TGG | - | chr1.4:12143799-12143818 | MS.gene32460:intron | 65.0% | |
| TCTAGAGAGAGGGGAGGGCG+AGG | - | chr1.4:12141748-12141767 | MS.gene32460:intron | 65.0% | |
| TCTGCTTCAGCAGGCCTGCC+AGG | + | chr1.4:12140484-12140503 | None:intergenic | 65.0% | |
| GCATCTCTGGGTTCGCGGGC+TGG | - | chr1.4:12144019-12144038 | MS.gene32460:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 12138840 | 12145679 | 12138840 | ID=MS.gene32460 |
| chr1.4 | mRNA | 12138840 | 12145679 | 12138840 | ID=MS.gene32460.t1;Parent=MS.gene32460 |
| chr1.4 | exon | 12145514 | 12145679 | 12145514 | ID=MS.gene32460.t1.exon1;Parent=MS.gene32460.t1 |
| chr1.4 | CDS | 12145514 | 12145679 | 12145514 | ID=cds.MS.gene32460.t1;Parent=MS.gene32460.t1 |
| chr1.4 | exon | 12144371 | 12144420 | 12144371 | ID=MS.gene32460.t1.exon2;Parent=MS.gene32460.t1 |
| chr1.4 | CDS | 12144371 | 12144420 | 12144371 | ID=cds.MS.gene32460.t1;Parent=MS.gene32460.t1 |
| chr1.4 | exon | 12144187 | 12144256 | 12144187 | ID=MS.gene32460.t1.exon3;Parent=MS.gene32460.t1 |
| chr1.4 | CDS | 12144187 | 12144256 | 12144187 | ID=cds.MS.gene32460.t1;Parent=MS.gene32460.t1 |
| chr1.4 | exon | 12143977 | 12144082 | 12143977 | ID=MS.gene32460.t1.exon4;Parent=MS.gene32460.t1 |
| chr1.4 | CDS | 12143977 | 12144082 | 12143977 | ID=cds.MS.gene32460.t1;Parent=MS.gene32460.t1 |
| chr1.4 | exon | 12143416 | 12143482 | 12143416 | ID=MS.gene32460.t1.exon5;Parent=MS.gene32460.t1 |
| chr1.4 | CDS | 12143416 | 12143482 | 12143416 | ID=cds.MS.gene32460.t1;Parent=MS.gene32460.t1 |
| chr1.4 | exon | 12143200 | 12143275 | 12143200 | ID=MS.gene32460.t1.exon6;Parent=MS.gene32460.t1 |
| chr1.4 | CDS | 12143200 | 12143275 | 12143200 | ID=cds.MS.gene32460.t1;Parent=MS.gene32460.t1 |
| chr1.4 | exon | 12139622 | 12139917 | 12139622 | ID=MS.gene32460.t1.exon7;Parent=MS.gene32460.t1 |
| chr1.4 | CDS | 12139622 | 12139917 | 12139622 | ID=cds.MS.gene32460.t1;Parent=MS.gene32460.t1 |
| chr1.4 | exon | 12138840 | 12138923 | 12138840 | ID=MS.gene32460.t1.exon8;Parent=MS.gene32460.t1 |
| chr1.4 | CDS | 12138840 | 12138923 | 12138840 | ID=cds.MS.gene32460.t1;Parent=MS.gene32460.t1 |
| Gene Sequence |
| Protein sequence |
