Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055162.t1 | XP_003623155.2 | 100 | 99 | 0 | 0 | 1 | 99 | 1 | 99 | 2.50E-48 | 201.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055162.t1 | Q9SI54 | 94.7 | 94 | 5 | 0 | 1 | 94 | 1 | 94 | 6.4e-45 | 181.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055162.t1 | G7L5K6 | 100.0 | 99 | 0 | 0 | 1 | 99 | 1 | 99 | 1.8e-48 | 201.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene055162 | 0.862976 | 3.46E-64 | -1.69E-46 |
| MS.gene049341 | MS.gene055162 | 0.835431 | 1.69E-56 | -1.69E-46 |
| MS.gene050277 | MS.gene055162 | 0.835963 | 1.24E-56 | -1.69E-46 |
| MS.gene050437 | MS.gene055162 | 0.833199 | 6.12E-56 | -1.69E-46 |
| MS.gene050689 | MS.gene055162 | 0.833184 | 6.17E-56 | -1.69E-46 |
| MS.gene050752 | MS.gene055162 | 0.804269 | 2.34E-49 | -1.69E-46 |
| MS.gene050815 | MS.gene055162 | 0.823804 | 1.14E-53 | -1.69E-46 |
| MS.gene051241 | MS.gene055162 | 0.852215 | 5.34E-61 | -1.69E-46 |
| MS.gene051243 | MS.gene055162 | 0.829122 | 6.14E-55 | -1.69E-46 |
| MS.gene051328 | MS.gene055162 | 0.821545 | 3.81E-53 | -1.69E-46 |
| MS.gene05134 | MS.gene055162 | 0.842176 | 3.03E-58 | -1.69E-46 |
| MS.gene051746 | MS.gene055162 | 0.814715 | 1.34E-51 | -1.69E-46 |
| MS.gene051903 | MS.gene055162 | 0.804462 | 2.14E-49 | -1.69E-46 |
| MS.gene052286 | MS.gene055162 | 0.805258 | 1.46E-49 | -1.69E-46 |
| MS.gene052879 | MS.gene055162 | 0.820007 | 8.61E-53 | -1.69E-46 |
| MS.gene052880 | MS.gene055162 | 0.811136 | 8.14E-51 | -1.69E-46 |
| MS.gene052947 | MS.gene055162 | 0.82635 | 2.85E-54 | -1.69E-46 |
| MS.gene055162 | MS.gene055912 | 0.803854 | 2.86E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene056601 | 0.84855 | 5.71E-60 | -1.69E-46 |
| MS.gene055162 | MS.gene056631 | 0.832567 | 8.78E-56 | -1.69E-46 |
| MS.gene055162 | MS.gene056760 | 0.801024 | 1.09E-48 | -1.69E-46 |
| MS.gene055162 | MS.gene057047 | 0.805517 | 1.28E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene057057 | 0.807453 | 5.02E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene057234 | 0.835962 | 1.24E-56 | -1.69E-46 |
| MS.gene055162 | MS.gene057694 | 0.81474 | 1.32E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene057705 | 0.844539 | 7.10E-59 | -1.69E-46 |
| MS.gene055162 | MS.gene058055 | 0.808039 | 3.77E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene058906 | 0.843991 | 9.97E-59 | -1.69E-46 |
| MS.gene055162 | MS.gene05978 | 0.818369 | 2.03E-52 | -1.69E-46 |
| MS.gene055162 | MS.gene059898 | 0.844101 | 9.31E-59 | -1.69E-46 |
| MS.gene055162 | MS.gene06001 | 0.824617 | 7.33E-54 | -1.69E-46 |
| MS.gene055162 | MS.gene060429 | 0.80649 | 8.02E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene060917 | 0.808919 | 2.44E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene061145 | 0.818345 | 2.06E-52 | -1.69E-46 |
| MS.gene055162 | MS.gene06172 | 0.850644 | 1.49E-60 | -1.69E-46 |
| MS.gene055162 | MS.gene061866 | 0.80512 | 1.56E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene061869 | 0.813613 | 2.34E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene061874 | 0.81652 | 5.30E-52 | -1.69E-46 |
| MS.gene055162 | MS.gene061877 | 0.815352 | 9.66E-52 | -1.69E-46 |
| MS.gene055162 | MS.gene061884 | 0.812207 | 4.76E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene06371 | 0.802472 | 5.52E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene063787 | 0.803145 | 4.01E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene064071 | 0.868188 | 7.86E-66 | -1.69E-46 |
| MS.gene055162 | MS.gene064072 | 0.867494 | 1.31E-65 | -1.69E-46 |
| MS.gene055162 | MS.gene06462 | 0.801745 | 7.79E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene064937 | 0.807826 | 4.18E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene065357 | 0.801882 | 7.30E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene066105 | 0.810362 | 1.20E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene06667 | 0.810585 | 1.07E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene06739 | 0.801585 | 8.40E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene067521 | 0.813483 | 2.50E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene067571 | 0.804552 | 2.04E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene068013 | 0.801669 | 8.07E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene06836 | 0.803624 | 3.19E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene06837 | 0.809138 | 2.19E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene068695 | 0.811647 | 6.30E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene069310 | 0.870024 | 1.99E-66 | -1.69E-46 |
| MS.gene055162 | MS.gene069313 | 0.8064 | 8.38E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene06957 | 0.801124 | 1.04E-48 | -1.69E-46 |
| MS.gene055162 | MS.gene06984 | 0.816001 | 6.93E-52 | -1.69E-46 |
| MS.gene055162 | MS.gene06989 | 0.856299 | 3.53E-62 | -1.69E-46 |
| MS.gene055162 | MS.gene069962 | 0.835191 | 1.94E-56 | -1.69E-46 |
| MS.gene055162 | MS.gene070222 | 0.80552 | 1.28E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene07090 | 0.831307 | 1.80E-55 | -1.69E-46 |
| MS.gene055162 | MS.gene07100 | 0.855366 | 6.62E-62 | -1.69E-46 |
| MS.gene055162 | MS.gene071751 | 0.807326 | 5.34E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene071958 | 0.807915 | 4.00E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene07217 | 0.849427 | 3.26E-60 | -1.69E-46 |
| MS.gene055162 | MS.gene07222 | 0.846516 | 2.07E-59 | -1.69E-46 |
| MS.gene055162 | MS.gene072555 | 0.800011 | 1.76E-48 | -1.69E-46 |
| MS.gene055162 | MS.gene073332 | 0.800943 | 1.14E-48 | -1.69E-46 |
| MS.gene055162 | MS.gene073785 | 0.813521 | 2.45E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene07388 | 0.801877 | 7.32E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene074258 | 0.82177 | 3.38E-53 | -1.69E-46 |
| MS.gene055162 | MS.gene08428 | 0.86927 | 3.51E-66 | -1.69E-46 |
| MS.gene055162 | MS.gene09032 | 0.809054 | 2.29E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene09873 | 0.800903 | 1.16E-48 | -1.69E-46 |
| MS.gene055162 | MS.gene20156 | 0.809918 | 1.49E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene20302 | 0.823658 | 1.23E-53 | -1.69E-46 |
| MS.gene055162 | MS.gene20740 | 0.846345 | 2.30E-59 | -1.69E-46 |
| MS.gene055162 | MS.gene21614 | 0.831873 | 1.30E-55 | -1.69E-46 |
| MS.gene055162 | MS.gene22740 | 0.822303 | 2.55E-53 | -1.69E-46 |
| MS.gene055162 | MS.gene22968 | 0.861873 | 7.56E-64 | -1.69E-46 |
| MS.gene055162 | MS.gene23058 | 0.857452 | 1.62E-62 | -1.69E-46 |
| MS.gene055162 | MS.gene23059 | 0.835795 | 1.36E-56 | -1.69E-46 |
| MS.gene055162 | MS.gene23954 | 0.81703 | 4.07E-52 | -1.69E-46 |
| MS.gene055162 | MS.gene24610 | 0.839853 | 1.24E-57 | -1.69E-46 |
| MS.gene055162 | MS.gene24930 | 0.843633 | 1.24E-58 | -1.69E-46 |
| MS.gene055162 | MS.gene24933 | 0.800279 | 1.55E-48 | -1.69E-46 |
| MS.gene055162 | MS.gene27991 | 0.84474 | 6.27E-59 | -1.69E-46 |
| MS.gene055162 | MS.gene28658 | 0.816006 | 6.91E-52 | -1.69E-46 |
| MS.gene055162 | MS.gene28944 | 0.813071 | 3.08E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene30158 | -0.807272 | 5.48E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene30768 | -0.805968 | 1.03E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene31196 | 0.829373 | 5.34E-55 | -1.69E-46 |
| MS.gene055162 | MS.gene33879 | 0.803226 | 3.86E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene34687 | 0.807463 | 4.99E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene35048 | 0.819682 | 1.02E-52 | -1.69E-46 |
| MS.gene055162 | MS.gene35135 | 0.824607 | 7.36E-54 | -1.69E-46 |
| MS.gene055162 | MS.gene35214 | 0.866355 | 3.03E-65 | -1.69E-46 |
| MS.gene055162 | MS.gene36918 | 0.806784 | 6.95E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene38844 | 0.802315 | 5.95E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene40055 | 0.804549 | 2.05E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene40595 | 0.843127 | 1.70E-58 | -1.69E-46 |
| MS.gene055162 | MS.gene40648 | 0.818319 | 2.09E-52 | -1.69E-46 |
| MS.gene055162 | MS.gene40919 | 0.809458 | 1.87E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene41455 | 0.824612 | 7.35E-54 | -1.69E-46 |
| MS.gene055162 | MS.gene42871 | 0.80475 | 1.86E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene43537 | 0.826677 | 2.38E-54 | -1.69E-46 |
| MS.gene055162 | MS.gene43602 | 0.810885 | 9.23E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene43992 | 0.828036 | 1.12E-54 | -1.69E-46 |
| MS.gene055162 | MS.gene44141 | 0.837096 | 6.36E-57 | -1.69E-46 |
| MS.gene055162 | MS.gene47402 | 0.807627 | 4.61E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene47955 | 0.83906 | 1.99E-57 | -1.69E-46 |
| MS.gene055162 | MS.gene48701 | 0.800292 | 1.54E-48 | -1.69E-46 |
| MS.gene055162 | MS.gene52075 | 0.818577 | 1.82E-52 | -1.69E-46 |
| MS.gene055162 | MS.gene52837 | 0.814228 | 1.71E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene54282 | 0.861831 | 7.78E-64 | -1.69E-46 |
| MS.gene055162 | MS.gene54919 | 0.881524 | 2.23E-70 | -1.69E-46 |
| MS.gene055162 | MS.gene55732 | 0.824889 | 6.32E-54 | -1.69E-46 |
| MS.gene055162 | MS.gene55887 | 0.855065 | 8.10E-62 | -1.69E-46 |
| MS.gene055162 | MS.gene55988 | 0.810536 | 1.10E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene56067 | 0.803496 | 3.39E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene56414 | 0.826375 | 2.81E-54 | -1.69E-46 |
| MS.gene055162 | MS.gene56451 | 0.831446 | 1.66E-55 | -1.69E-46 |
| MS.gene055162 | MS.gene56462 | 0.806573 | 7.71E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene56656 | 0.817142 | 3.84E-52 | -1.69E-46 |
| MS.gene055162 | MS.gene57210 | 0.812203 | 4.77E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene57214 | 0.813293 | 2.75E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene58227 | 0.802791 | 4.74E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene59979 | 0.804482 | 2.12E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene60717 | 0.835696 | 1.44E-56 | -1.69E-46 |
| MS.gene055162 | MS.gene61543 | 0.820589 | 6.33E-53 | -1.69E-46 |
| MS.gene055162 | MS.gene62834 | 0.812267 | 4.62E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene63726 | 0.812877 | 3.40E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene64071 | 0.806696 | 7.26E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene65076 | 0.825855 | 3.73E-54 | -1.69E-46 |
| MS.gene055162 | MS.gene65412 | 0.805757 | 1.14E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene66089 | 0.843278 | 1.55E-58 | -1.69E-46 |
| MS.gene055162 | MS.gene67884 | 0.837917 | 3.92E-57 | -1.69E-46 |
| MS.gene055162 | MS.gene68136 | 0.828633 | 8.06E-55 | -1.69E-46 |
| MS.gene055162 | MS.gene68735 | 0.843541 | 1.31E-58 | -1.69E-46 |
| MS.gene055162 | MS.gene68810 | 0.872988 | 2.08E-67 | -1.69E-46 |
| MS.gene055162 | MS.gene69649 | 0.82225 | 2.62E-53 | -1.69E-46 |
| MS.gene055162 | MS.gene69717 | 0.802562 | 5.29E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene69947 | 0.826082 | 3.30E-54 | -1.69E-46 |
| MS.gene055162 | MS.gene70398 | 0.816839 | 4.50E-52 | -1.69E-46 |
| MS.gene055162 | MS.gene70460 | 0.808313 | 3.29E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene71215 | 0.822479 | 2.32E-53 | -1.69E-46 |
| MS.gene055162 | MS.gene71949 | 0.809435 | 1.90E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene72285 | 0.8211 | 4.83E-53 | -1.69E-46 |
| MS.gene055162 | MS.gene72413 | 0.821837 | 3.26E-53 | -1.69E-46 |
| MS.gene055162 | MS.gene72904 | 0.820109 | 8.16E-53 | -1.69E-46 |
| MS.gene055162 | MS.gene73243 | 0.805322 | 1.41E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene73364 | 0.871718 | 5.52E-67 | -1.69E-46 |
| MS.gene055162 | MS.gene76576 | 0.809636 | 1.72E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene78232 | 0.81028 | 1.25E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene79110 | 0.806035 | 1.00E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene79884 | 0.803358 | 3.62E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene80257 | 0.823323 | 1.47E-53 | -1.69E-46 |
| MS.gene055162 | MS.gene81361 | 0.80647 | 8.10E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene82827 | 0.845312 | 4.39E-59 | -1.69E-46 |
| MS.gene055162 | MS.gene84455 | 0.835836 | 1.33E-56 | -1.69E-46 |
| MS.gene055162 | MS.gene84657 | 0.801791 | 7.62E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene85108 | 0.804576 | 2.02E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene86265 | 0.871137 | 8.59E-67 | -1.69E-46 |
| MS.gene055162 | MS.gene86350 | 0.812812 | 3.51E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene86381 | 0.838547 | 2.69E-57 | -1.69E-46 |
| MS.gene055162 | MS.gene86392 | 0.814263 | 1.68E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene87285 | 0.821121 | 4.78E-53 | -1.69E-46 |
| MS.gene055162 | MS.gene88229 | 0.801166 | 1.02E-48 | -1.69E-46 |
| MS.gene055162 | MS.gene88371 | 0.820027 | 8.52E-53 | -1.69E-46 |
| MS.gene055162 | MS.gene88680 | 0.811101 | 8.28E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene88808 | -0.806715 | 7.19E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene89027 | 0.816453 | 5.49E-52 | -1.69E-46 |
| MS.gene055162 | MS.gene89036 | 0.825392 | 4.81E-54 | -1.69E-46 |
| MS.gene055162 | MS.gene89562 | 0.811495 | 6.81E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene89721 | 0.828665 | 7.92E-55 | -1.69E-46 |
| MS.gene055162 | MS.gene90232 | 0.804192 | 2.43E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene90649 | 0.813885 | 2.04E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene90981 | 0.864017 | 1.64E-64 | -1.69E-46 |
| MS.gene055162 | MS.gene92572 | 0.828156 | 1.05E-54 | -1.69E-46 |
| MS.gene055162 | MS.gene93973 | 0.805307 | 1.42E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene95233 | 0.840656 | 7.62E-58 | -1.69E-46 |
| MS.gene055162 | MS.gene96322 | 0.812431 | 4.25E-51 | -1.69E-46 |
| MS.gene055162 | MS.gene97237 | 0.816449 | 5.50E-52 | -1.69E-46 |
| MS.gene055162 | MS.gene97306 | 0.810058 | 1.39E-50 | -1.69E-46 |
| MS.gene055162 | MS.gene98393 | 0.801384 | 9.24E-49 | -1.69E-46 |
| MS.gene055162 | MS.gene99313 | 0.83203 | 1.19E-55 | -1.69E-46 |
| MS.gene055162 | MS.gene99595 | 0.802489 | 5.48E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055162.t1 | MTR_7g065100 | 100.000 | 99 | 0 | 0 | 1 | 99 | 1 | 99 | 3.03e-67 | 197 |
| MS.gene055162.t1 | MTR_8g036205 | 96.512 | 86 | 3 | 0 | 1 | 86 | 1 | 86 | 5.68e-53 | 161 |
| MS.gene055162.t1 | MTR_7g104930 | 38.028 | 71 | 35 | 1 | 10 | 80 | 9 | 70 | 1.14e-12 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055162.t1 | AT2G03870 | 90.816 | 98 | 9 | 0 | 1 | 98 | 1 | 98 | 2.41e-60 | 179 |
| MS.gene055162.t1 | AT2G03870 | 90.816 | 98 | 9 | 0 | 1 | 98 | 1 | 98 | 2.41e-60 | 179 |
| MS.gene055162.t1 | AT2G23930 | 42.254 | 71 | 32 | 2 | 10 | 80 | 9 | 70 | 3.56e-13 | 59.7 |
| MS.gene055162.t1 | AT3G11500 | 39.437 | 71 | 34 | 1 | 10 | 80 | 9 | 70 | 2.28e-12 | 57.8 |
| MS.gene055162.t1 | AT3G11500 | 39.437 | 71 | 34 | 1 | 10 | 80 | 9 | 70 | 2.28e-12 | 57.8 |
Find 27 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGGAGGAAAGAAACAGTTT+TGG | 0.368734 | 7.4:+39523498 | MS.gene055162:CDS |
| GCCCCATCTGGTTGAAGAAA+GGG | 0.432718 | 7.4:-39528026 | None:intergenic |
| TCTCATCGGTACCATCGGTT+GGG | 0.437918 | 7.4:-39527995 | None:intergenic |
| TCAATTACTTAACCTTGTAC+TGG | 0.449744 | 7.4:+39526015 | MS.gene055162:CDS |
| CGCCCCATCTGGTTGAAGAA+AGG | 0.450498 | 7.4:-39528027 | None:intergenic |
| ATTCACTCTTACGCCCCATC+TGG | 0.472924 | 7.4:-39528038 | None:intergenic |
| ACCCCTTTCTTCAACCAGAT+GGG | 0.493242 | 7.4:+39528024 | MS.gene055162:CDS |
| AACCCCTTTCTTCAACCAGA+TGG | 0.507354 | 7.4:+39528023 | MS.gene055162:CDS |
| TGCAATCTCATCGGTACCAT+CGG | 0.510507 | 7.4:-39528000 | None:intergenic |
| TCAGTGACAGGAACTTTGAA+AGG | 0.518990 | 7.4:+39525986 | MS.gene055162:intron |
| GTTAAAATGCAGGTTTGTAG+AGG | 0.525800 | 7.4:+39527951 | MS.gene055162:intron |
| CTCATCGGTACCATCGGTTG+GGG | 0.529590 | 7.4:-39527994 | None:intergenic |
| ATCTCATCGGTACCATCGGT+TGG | 0.531471 | 7.4:-39527996 | None:intergenic |
| ACTGATCAGACAAGAAGTCT+TGG | 0.531760 | 7.4:+39527250 | MS.gene055162:CDS |
| CAACAGCTTCGTCCAGTACA+AGG | 0.533258 | 7.4:-39526027 | None:intergenic |
| AAGACTTCTTGTCTGATCAG+TGG | 0.561348 | 7.4:-39527248 | None:intergenic |
| TTGGCAAAATTCGTTGACAA+AGG | 0.572355 | 7.4:+39523523 | MS.gene055162:CDS |
| CCCCATCTGGTTGAAGAAAG+GGG | 0.574538 | 7.4:-39528025 | None:intergenic |
| CCCCTTTCTTCAACCAGATG+GGG | 0.577044 | 7.4:+39528025 | MS.gene055162:CDS |
| TGGATTACCTTGTCTACCAC+CGG | 0.583325 | 7.4:-39523563 | None:intergenic |
| GGTGTTCAAGTTAAGCTCAC+CGG | 0.616462 | 7.4:+39523544 | MS.gene055162:CDS |
| AAGCTCACCGGTGGTAGACA+AGG | 0.616471 | 7.4:+39523556 | MS.gene055162:CDS |
| AAAGGGGTTTGCAATCTCAT+CGG | 0.630182 | 7.4:-39528009 | None:intergenic |
| ATGCTCGTGTCCCCAACCGA+TGG | 0.635299 | 7.4:+39527984 | MS.gene055162:CDS |
| GTTCAAGTTAAGCTCACCGG+TGG | 0.687790 | 7.4:+39523547 | MS.gene055162:CDS |
| GAAGCTGTTGAGTTTCTGAG+AGG | 0.702935 | 7.4:+39526040 | MS.gene055162:CDS |
| TATGTGATTAACAGTCAGGG+AGG | 0.712905 | 7.4:+39523482 | MS.gene055162:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAACTAAC+TGG | - | chr7.4:39523649-39523668 | None:intergenic | 10.0% |
| !! | AAAGAAAAATTATTAAGTTA+AGG | + | chr7.4:39525156-39525175 | MS.gene055162:intron | 10.0% |
| !! | ATTTCATAATAAAATTGTTT+GGG | - | chr7.4:39524561-39524580 | None:intergenic | 10.0% |
| !! | TATTTCATAATAAAATTGTT+TGG | - | chr7.4:39524562-39524581 | None:intergenic | 10.0% |
| !!! | AAACAATTTTATTATGAAAT+AGG | + | chr7.4:39524561-39524580 | MS.gene055162:intron | 10.0% |
| !!! | AACAATTTTATTATGAAATA+GGG | + | chr7.4:39524562-39524581 | MS.gene055162:intron | 10.0% |
| !!! | AACTTAATAATTTTTCTTTT+TGG | - | chr7.4:39525155-39525174 | None:intergenic | 10.0% |
| !!! | ATAATATCTTATTTTTGTAA+TGG | + | chr7.4:39527660-39527679 | MS.gene055162:intron | 10.0% |
| !!! | TATTATTTATATGTTTGTTA+AGG | - | chr7.4:39524412-39524431 | None:intergenic | 10.0% |
| !!! | TTTTTGATATTTATGAATTT+TGG | + | chr7.4:39526118-39526137 | MS.gene055162:intron | 10.0% |
| !! | AAAATTATTCAATAGATAAG+TGG | - | chr7.4:39523970-39523989 | None:intergenic | 15.0% |
| !! | ATAATTAAAGAGGAAAAAAA+AGG | - | chr7.4:39523707-39523726 | None:intergenic | 15.0% |
| !! | ATTTATTAATTGAAACCAAT+AGG | + | chr7.4:39527500-39527519 | MS.gene055162:intron | 15.0% |
| !!! | ACTTATCTATTGAATAATTT+TGG | + | chr7.4:39523969-39523988 | MS.gene055162:intron | 15.0% |
| !!! | ATTACATTTTCTTATTCTTT+TGG | + | chr7.4:39526662-39526681 | MS.gene055162:intron | 15.0% |
| !!! | CTTATCTATTGAATAATTTT+GGG | + | chr7.4:39523970-39523989 | MS.gene055162:intron | 15.0% |
| !!! | TTATCTATTGAATAATTTTG+GGG | + | chr7.4:39523971-39523990 | MS.gene055162:intron | 15.0% |
| !!! | TTTTAATTAATTGTTGATTC+AGG | - | chr7.4:39526569-39526588 | None:intergenic | 15.0% |
| !! | AGAGGAATATTTGTATAAAT+AGG | - | chr7.4:39524698-39524717 | None:intergenic | 20.0% |
| !! | ATAACTCATTGAAATAAGAT+GGG | + | chr7.4:39526172-39526191 | MS.gene055162:intron | 20.0% |
| !! | ATGACATGAAAACATAATTA+AGG | - | chr7.4:39524487-39524506 | None:intergenic | 20.0% |
| !! | ATGCAAATCTTTATCTTTAT+CGG | + | chr7.4:39527537-39527556 | MS.gene055162:intron | 20.0% |
| !! | CTGTTTAAGAAAAATTAGAT+GGG | - | chr7.4:39527299-39527318 | None:intergenic | 20.0% |
| !! | TAAACAAAAAGTTTAAGCTT+AGG | - | chr7.4:39526475-39526494 | None:intergenic | 20.0% |
| !! | TACATTTCATAAACTAAAAG+AGG | - | chr7.4:39524201-39524220 | None:intergenic | 20.0% |
| !! | TATAACTCATTGAAATAAGA+TGG | + | chr7.4:39526171-39526190 | MS.gene055162:intron | 20.0% |
| !! | TCTGTTTAAGAAAAATTAGA+TGG | - | chr7.4:39527300-39527319 | None:intergenic | 20.0% |
| !! | TTAAGAAAAACACAACAATT+GGG | - | chr7.4:39526258-39526277 | None:intergenic | 20.0% |
| !! | TTCTCAAAAGCTATAAAATT+AGG | + | chr7.4:39526410-39526429 | MS.gene055162:intron | 20.0% |
| !! | TTTAAGAAAAACACAACAAT+TGG | - | chr7.4:39526259-39526278 | None:intergenic | 20.0% |
| !!! | AAATTAGTTAAGCTTTTCAA+AGG | + | chr7.4:39526343-39526362 | MS.gene055162:intron | 20.0% |
| !!! | ATTATATTTTGTTAGGAAAC+TGG | + | chr7.4:39525617-39525636 | MS.gene055162:intron | 20.0% |
| !!! | CTTGACTGTTTTTTTTTTTT+TGG | + | chr7.4:39527083-39527102 | MS.gene055162:intron | 20.0% |
| !!! | CTTTTAGTTTATGAAATGTA+AGG | + | chr7.4:39524201-39524220 | MS.gene055162:intron | 20.0% |
| !!! | TATCTTATTTTTGTAATGGT+TGG | + | chr7.4:39527664-39527683 | MS.gene055162:intron | 20.0% |
| ! | AAAGGTTGTTAGTTAATTAG+AGG | - | chr7.4:39524716-39524735 | None:intergenic | 25.0% |
| ! | AATTTCAACTCTTGCAAAAT+GGG | + | chr7.4:39524234-39524253 | MS.gene055162:intron | 25.0% |
| ! | ATAGAAGAGCAAGAAATAAA+CGG | - | chr7.4:39524913-39524932 | None:intergenic | 25.0% |
| ! | ATCAAATCACAAAGAACATA+AGG | - | chr7.4:39525057-39525076 | None:intergenic | 25.0% |
| ! | ATTATGAAATAGGGAAGAAT+AGG | + | chr7.4:39524571-39524590 | MS.gene055162:intron | 25.0% |
| ! | TAATTTCAACTCTTGCAAAA+TGG | + | chr7.4:39524233-39524252 | MS.gene055162:intron | 25.0% |
| ! | TAGGATTAGATAGTAATGAA+GGG | + | chr7.4:39526206-39526225 | MS.gene055162:intron | 25.0% |
| ! | TATATGAAAAATGAAGTCAC+TGG | - | chr7.4:39526155-39526174 | None:intergenic | 25.0% |
| ! | TCTATTAAAATGAAAAGAGC+AGG | - | chr7.4:39527637-39527656 | None:intergenic | 25.0% |
| ! | TGCAAATCTTTATCTTTATC+GGG | + | chr7.4:39527538-39527557 | MS.gene055162:intron | 25.0% |
| ! | TTAGGATTAGATAGTAATGA+AGG | + | chr7.4:39526205-39526224 | MS.gene055162:intron | 25.0% |
| ! | TTATATGTGATTAACAGTCA+GGG | + | chr7.4:39523479-39523498 | MS.gene055162:intron | 25.0% |
| ! | TTATGCAAACAAAACATAGT+TGG | - | chr7.4:39526946-39526965 | None:intergenic | 25.0% |
| ! | TTGATACTGCTTTAACTATT+TGG | + | chr7.4:39526634-39526653 | MS.gene055162:intron | 25.0% |
| ! | TTTATATGTGATTAACAGTC+AGG | + | chr7.4:39523478-39523497 | MS.gene055162:intron | 25.0% |
| !! | AGATTGATAACTAAAATCCA+TGG | + | chr7.4:39527183-39527202 | MS.gene055162:intron | 25.0% |
| !! | ATAACTCCCTTTTATTCTAT+GGG | + | chr7.4:39524743-39524762 | MS.gene055162:intron | 25.0% |
| !! | TATAACTCCCTTTTATTCTA+TGG | + | chr7.4:39524742-39524761 | MS.gene055162:intron | 25.0% |
| !!! | CTCATTTTTCTATCTAATGT+AGG | - | chr7.4:39525219-39525238 | None:intergenic | 25.0% |
| !!! | GGTTCTGATTATATTTTGTT+AGG | + | chr7.4:39525610-39525629 | MS.gene055162:intron | 25.0% |
| !!! | TACTGTTTTTGTTAAAATGC+AGG | + | chr7.4:39527941-39527960 | MS.gene055162:intron | 25.0% |
| !!! | TATTAAGTTAAGGTTTGTTG+TGG | + | chr7.4:39525166-39525185 | MS.gene055162:intron | 25.0% |
| !!! | TCTCTTCAATGATTTGTTTT+AGG | + | chr7.4:39525129-39525148 | MS.gene055162:intron | 25.0% |
| !!! | TGATTTGATCTTTGTTGTTT+GGG | + | chr7.4:39525068-39525087 | MS.gene055162:intron | 25.0% |
| !!! | TGTCTGTTTTATTTAGTGAA+AGG | + | chr7.4:39524817-39524836 | MS.gene055162:intron | 25.0% |
| !!! | TTTACTCTTAAATTTGCTGA+AGG | + | chr7.4:39524087-39524106 | MS.gene055162:intron | 25.0% |
| AAAATAAGCTCAATCCAAAC+AGG | - | chr7.4:39524285-39524304 | None:intergenic | 30.0% | |
| AAACATAATTAAGGCTCGTT+TGG | - | chr7.4:39524478-39524497 | None:intergenic | 30.0% | |
| AAAGCACAATGACAATAAGA+GGG | - | chr7.4:39525908-39525927 | None:intergenic | 30.0% | |
| AAATCCATTGAAAGACCAAT+AGG | - | chr7.4:39524987-39525006 | None:intergenic | 30.0% | |
| AAATTCATTGAGTCAGATTC+AGG | + | chr7.4:39526231-39526250 | MS.gene055162:intron | 30.0% | |
| AACTTGCATGAATAAATGTC+TGG | + | chr7.4:39527320-39527339 | MS.gene055162:intron | 30.0% | |
| AAGAATAAGAGTGATTTGAG+TGG | - | chr7.4:39525808-39525827 | None:intergenic | 30.0% | |
| AAGGGAGTTATAGTAATGAA+AGG | - | chr7.4:39524734-39524753 | None:intergenic | 30.0% | |
| AATCACTTACGCTAAGTATT+GGG | + | chr7.4:39523927-39523946 | MS.gene055162:intron | 30.0% | |
| AATCCATTGAAAGACCAATA+GGG | - | chr7.4:39524986-39525005 | None:intergenic | 30.0% | |
| AATGAAAAGAGCAGGTAAAT+AGG | - | chr7.4:39527629-39527648 | None:intergenic | 30.0% | |
| AATTCATTGAGTCAGATTCA+GGG | + | chr7.4:39526232-39526251 | MS.gene055162:intron | 30.0% | |
| ACATAAGGAAAGGTAAACAA+TGG | - | chr7.4:39525042-39525061 | None:intergenic | 30.0% | |
| AGAAGAAGAAACCCTAAAAA+TGG | - | chr7.4:39523586-39523605 | None:intergenic | 30.0% | |
| AGATGACAGAAAATTAACTG+TGG | - | chr7.4:39525112-39525131 | None:intergenic | 30.0% | |
| AGCACAAAAAGAAAATACCA+TGG | - | chr7.4:39527203-39527222 | None:intergenic | 30.0% | |
| AGGAGAATATACAAATAGAG+TGG | - | chr7.4:39524678-39524697 | None:intergenic | 30.0% | |
| AGGATTAGATAGTAATGAAG+GGG | + | chr7.4:39526207-39526226 | MS.gene055162:intron | 30.0% | |
| AGTTAAAGCAGTATCAATGT+TGG | - | chr7.4:39526631-39526650 | None:intergenic | 30.0% | |
| ATATCCAATGTGACAAATGT+GGG | - | chr7.4:39525527-39525546 | None:intergenic | 30.0% | |
| ATCACAAAGAACATAAGGAA+AGG | - | chr7.4:39525052-39525071 | None:intergenic | 30.0% | |
| ATGAAAAGAGCAGGTAAATA+GGG | - | chr7.4:39527628-39527647 | None:intergenic | 30.0% | |
| ATTTCACTGAGCTAAAACAA+AGG | + | chr7.4:39527895-39527914 | MS.gene055162:intron | 30.0% | |
| CGAGTTTAATAAAATGCTCA+GGG | - | chr7.4:39523789-39523808 | None:intergenic | 30.0% | |
| GAACTTACTTCTTATGTGTT+GGG | + | chr7.4:39524533-39524552 | MS.gene055162:intron | 30.0% | |
| GAGAAAAAACTCTCATTCAA+AGG | + | chr7.4:39524593-39524612 | MS.gene055162:intron | 30.0% | |
| TAAGCACTAAAAGGAACTTA+TGG | + | chr7.4:39526524-39526543 | MS.gene055162:intron | 30.0% | |
| TAATCACTTACGCTAAGTAT+TGG | + | chr7.4:39523926-39523945 | MS.gene055162:intron | 30.0% | |
| TACAAACAAGAACTTCCTAT+TGG | - | chr7.4:39527518-39527537 | None:intergenic | 30.0% | |
| TAGTGTAGATGACTCATTAA+GGG | + | chr7.4:39524259-39524278 | MS.gene055162:intron | 30.0% | |
| TATATCCAATGTGACAAATG+TGG | - | chr7.4:39525528-39525547 | None:intergenic | 30.0% | |
| TCAATTACTTAACCTTGTAC+TGG | + | chr7.4:39526015-39526034 | MS.gene055162:CDS | 30.0% | |
| TCAGATGAATTGATGAGAAT+GGG | + | chr7.4:39527471-39527490 | MS.gene055162:intron | 30.0% | |
| TTAGTGTAGATGACTCATTA+AGG | + | chr7.4:39524258-39524277 | MS.gene055162:intron | 30.0% | |
| TTGTGCTTCATAAAACTCTT+TGG | + | chr7.4:39524017-39524036 | MS.gene055162:intron | 30.0% | |
| TTTATCGGGAGAGAAAATTA+AGG | + | chr7.4:39527552-39527571 | MS.gene055162:intron | 30.0% | |
| ! | AAAAGCACAATGACAATAAG+AGG | - | chr7.4:39525909-39525928 | None:intergenic | 30.0% |
| ! | AATTTTTCCATGCTTGAGAA+GGG | + | chr7.4:39526995-39527014 | MS.gene055162:intron | 30.0% |
| ! | ATATTTTGTTAGGAAACTGG+TGG | + | chr7.4:39525620-39525639 | MS.gene055162:intron | 30.0% |
| ! | ATTTAGCTCACTTGTAAACA+AGG | - | chr7.4:39527735-39527754 | None:intergenic | 30.0% |
| ! | ATTTGTTGAATTTCAGTGAC+AGG | + | chr7.4:39525974-39525993 | MS.gene055162:intron | 30.0% |
| ! | CCTGAGCATTTTATTAAACT+CGG | + | chr7.4:39523787-39523806 | MS.gene055162:intron | 30.0% |
| ! | CTTGAATTACAGTTTTCCAA+GGG | - | chr7.4:39526920-39526939 | None:intergenic | 30.0% |
| ! | TAACTCCCTTTTATTCTATG+GGG | + | chr7.4:39524744-39524763 | MS.gene055162:intron | 30.0% |
| ! | TAATTTTTCCATGCTTGAGA+AGG | + | chr7.4:39526994-39527013 | MS.gene055162:intron | 30.0% |
| ! | TCTTGAATTACAGTTTTCCA+AGG | - | chr7.4:39526921-39526940 | None:intergenic | 30.0% |
| !! | AGACAAGGTAATCCATTTTT+AGG | + | chr7.4:39523571-39523590 | MS.gene055162:intron | 30.0% |
| !! | GACAAGGTAATCCATTTTTA+GGG | + | chr7.4:39523572-39523591 | MS.gene055162:intron | 30.0% |
| !! | GTGATTTGATCTTTGTTGTT+TGG | + | chr7.4:39525067-39525086 | MS.gene055162:intron | 30.0% |
| !! | TTGAAATAAGATGGGTTTTC+AGG | + | chr7.4:39526180-39526199 | MS.gene055162:intron | 30.0% |
| !!! | AACACTAACACTGCTTTTTT+GGG | - | chr7.4:39526383-39526402 | None:intergenic | 30.0% |
| !!! | GAAAGAAACAGTTTTGGATT+TGG | + | chr7.4:39523504-39523523 | MS.gene055162:CDS | 30.0% |
| !!! | TTGAGCTTATTTTGAGCTTA+TGG | + | chr7.4:39524292-39524311 | MS.gene055162:intron | 30.0% |
| !!! | TTTTTGGTTACTGACTTGAA+TGG | + | chr7.4:39527099-39527118 | MS.gene055162:intron | 30.0% |
| AACAACGCATAGTATATGCA+AGG | - | chr7.4:39523869-39523888 | None:intergenic | 35.0% | |
| AATCAGAACCCAAAACCTTA+AGG | - | chr7.4:39525600-39525619 | None:intergenic | 35.0% | |
| AATGGAAAGCTTCAGAATCT+AGG | - | chr7.4:39525024-39525043 | None:intergenic | 35.0% | |
| AGTAAGCAGTAAGCACTAAA+AGG | + | chr7.4:39526515-39526534 | MS.gene055162:intron | 35.0% | |
| AGTGAGAATAGTGATTTGAG+TGG | - | chr7.4:39525883-39525902 | None:intergenic | 35.0% | |
| ATAAGAGTGATTTGAGTGGT+AGG | - | chr7.4:39525804-39525823 | None:intergenic | 35.0% | |
| ATTGAGTCACTGTGAAAACA+AGG | - | chr7.4:39526088-39526107 | None:intergenic | 35.0% | |
| CAAAAAAGCAGTGTTAGTGT+TGG | + | chr7.4:39526382-39526401 | MS.gene055162:intron | 35.0% | |
| CAGATGAATTGATGAGAATG+GGG | + | chr7.4:39527472-39527491 | MS.gene055162:intron | 35.0% | |
| CATAAACCCAAAATGCCTTA+AGG | + | chr7.4:39525267-39525286 | MS.gene055162:intron | 35.0% | |
| CATCTTTACCCAAAACCTTA+AGG | - | chr7.4:39525285-39525304 | None:intergenic | 35.0% | |
| CATGCGTTAAATAAGAGTGA+GGG | - | chr7.4:39525689-39525708 | None:intergenic | 35.0% | |
| CCCTTTGCAAATCAACTATT+CGG | + | chr7.4:39527032-39527051 | MS.gene055162:intron | 35.0% | |
| CCGAGTTTAATAAAATGCTC+AGG | - | chr7.4:39523790-39523809 | None:intergenic | 35.0% | |
| CGAACTTACTTCTTATGTGT+TGG | + | chr7.4:39524532-39524551 | MS.gene055162:intron | 35.0% | |
| CTATATCCTAACAATATGCG+CGG | + | chr7.4:39524943-39524962 | MS.gene055162:intron | 35.0% | |
| CTCAATAAGCTTGACAAGAA+AGG | - | chr7.4:39526827-39526846 | None:intergenic | 35.0% | |
| GAAACCATCAAAGAAGTTGT+GGG | + | chr7.4:39525708-39525727 | MS.gene055162:intron | 35.0% | |
| GATAACTATCCAGTTTGGAT+CGG | + | chr7.4:39524114-39524133 | MS.gene055162:intron | 35.0% | |
| GATGTGATAACTATCCAGTT+TGG | + | chr7.4:39524109-39524128 | MS.gene055162:intron | 35.0% | |
| GTCAGATGAATTGATGAGAA+TGG | + | chr7.4:39527470-39527489 | MS.gene055162:intron | 35.0% | |
| GTTAAAATGCAGGTTTGTAG+AGG | + | chr7.4:39527951-39527970 | MS.gene055162:intron | 35.0% | |
| TAAGAGTGATTTGAGTGGTA+GGG | - | chr7.4:39525803-39525822 | None:intergenic | 35.0% | |
| TCACTTAGACTTGTAAACGT+TGG | - | chr7.4:39524653-39524672 | None:intergenic | 35.0% | |
| TCATGCGTTAAATAAGAGTG+AGG | - | chr7.4:39525690-39525709 | None:intergenic | 35.0% | |
| TCATTACCCATGCAAACAAT+AGG | - | chr7.4:39525936-39525955 | None:intergenic | 35.0% | |
| TGAAACCATCAAAGAAGTTG+TGG | + | chr7.4:39525707-39525726 | MS.gene055162:intron | 35.0% | |
| TTGCATCCTATTGTTTGCAT+GGG | + | chr7.4:39525927-39525946 | MS.gene055162:intron | 35.0% | |
| TTGGCAAAATTCGTTGACAA+AGG | + | chr7.4:39523523-39523542 | MS.gene055162:CDS | 35.0% | |
| TTTGCATCCTATTGTTTGCA+TGG | + | chr7.4:39525926-39525945 | MS.gene055162:intron | 35.0% | |
| ! | AATTCATCTGACTTGACTCA+TGG | - | chr7.4:39527462-39527481 | None:intergenic | 35.0% |
| ! | ATCACTTACGCTAAGTATTG+GGG | + | chr7.4:39523928-39523947 | MS.gene055162:intron | 35.0% |
| ! | ATTCATCTGACTTGACTCAT+GGG | - | chr7.4:39527461-39527480 | None:intergenic | 35.0% |
| ! | CCAAAATGCCTTAAGGTTTT+GGG | + | chr7.4:39525274-39525293 | MS.gene055162:intron | 35.0% |
| ! | TAACTGGTAACGAAAGTAAG+AGG | - | chr7.4:39523633-39523652 | None:intergenic | 35.0% |
| !! | AACTTGTTTTCCGCCAAATA+CGG | - | chr7.4:39524856-39524875 | None:intergenic | 35.0% |
| !! | AAGATGGGTTTTCAGGATTT+AGG | + | chr7.4:39526187-39526206 | MS.gene055162:intron | 35.0% |
| !! | ACCGAATAGTTGATTTGCAA+AGG | - | chr7.4:39527036-39527055 | None:intergenic | 35.0% |
| !! | CCAAAACCTTAAGGCATTTT+GGG | - | chr7.4:39525276-39525295 | None:intergenic | 35.0% |
| !! | CCGAATAGTTGATTTGCAAA+GGG | - | chr7.4:39527035-39527054 | None:intergenic | 35.0% |
| !! | TCACGGCTTAATCACTTTTA+TGG | + | chr7.4:39523818-39523837 | MS.gene055162:intron | 35.0% |
| !!! | CAACACTAACACTGCTTTTT+TGG | - | chr7.4:39526384-39526403 | None:intergenic | 35.0% |
| !!! | CTTAAGGCATTTTGGGTTTA+TGG | - | chr7.4:39525269-39525288 | None:intergenic | 35.0% |
| !!! | TAAGGTTTTGGGTAAAGATG+TGG | + | chr7.4:39525285-39525304 | MS.gene055162:intron | 35.0% |
| AAAGGGGTTTGCAATCTCAT+CGG | - | chr7.4:39528012-39528031 | None:intergenic | 40.0% | |
| AACCCAAAACCTTAAGGCAT+GGG | - | chr7.4:39525594-39525613 | None:intergenic | 40.0% | |
| AACGTTGGTGTATAGAGTAG+TGG | - | chr7.4:39524638-39524657 | None:intergenic | 40.0% | |
| AAGACTTCTTGTCTGATCAG+TGG | - | chr7.4:39527251-39527270 | None:intergenic | 40.0% | |
| AAGTCCCACATTTGTCACAT+TGG | + | chr7.4:39525520-39525539 | MS.gene055162:intron | 40.0% | |
| ACTGATCAGACAAGAAGTCT+TGG | + | chr7.4:39527250-39527269 | MS.gene055162:CDS | 40.0% | |
| AGCACTCCCCATAGAATAAA+AGG | - | chr7.4:39524753-39524772 | None:intergenic | 40.0% | |
| ATGCCATTGTTGGGTTATGA+GGG | - | chr7.4:39525367-39525386 | None:intergenic | 40.0% | |
| CAGAATCTAGGCTATCAGAA+AGG | - | chr7.4:39525012-39525031 | None:intergenic | 40.0% | |
| CATAGTATATGCAAGGTCTG+TGG | - | chr7.4:39523862-39523881 | None:intergenic | 40.0% | |
| CGTGATGATATTCCCGTATT+TGG | + | chr7.4:39524840-39524859 | MS.gene055162:intron | 40.0% | |
| CTTGTCAAGCTTATTGAGCT+TGG | + | chr7.4:39526829-39526848 | MS.gene055162:intron | 40.0% | |
| GATGATATTCCCGTATTTGG+CGG | + | chr7.4:39524843-39524862 | MS.gene055162:intron | 40.0% | |
| GCACTCCCCATAGAATAAAA+GGG | - | chr7.4:39524752-39524771 | None:intergenic | 40.0% | |
| GTAAAGAGATGTCCGTGTAA+AGG | - | chr7.4:39524072-39524091 | None:intergenic | 40.0% | |
| GTATTTGGCGGAAAACAAGT+TGG | + | chr7.4:39524855-39524874 | MS.gene055162:intron | 40.0% | |
| TAAACTCGGCTCATGTTTCA+CGG | + | chr7.4:39523801-39523820 | MS.gene055162:intron | 40.0% | |
| TAATACAGTAGTCCTGCAGT+TGG | + | chr7.4:39526886-39526905 | MS.gene055162:intron | 40.0% | |
| TATGTGATTAACAGTCAGGG+AGG | + | chr7.4:39523482-39523501 | MS.gene055162:intron | 40.0% | |
| TCAGTGACAGGAACTTTGAA+AGG | + | chr7.4:39525986-39526005 | MS.gene055162:intron | 40.0% | |
| TCCGTGTAAAGGCAAACATT+GGG | - | chr7.4:39524061-39524080 | None:intergenic | 40.0% | |
| TCGAACTCTTGTTCAACCAT+TGG | - | chr7.4:39525395-39525414 | None:intergenic | 40.0% | |
| TGATAGACAGTCACTCAACA+TGG | + | chr7.4:39526702-39526721 | MS.gene055162:intron | 40.0% | |
| TGTAATGGTTGGAGCTGTTT+GGG | + | chr7.4:39527675-39527694 | MS.gene055162:intron | 40.0% | |
| TTCTTGTGTCGAAAGTCTAC+TGG | + | chr7.4:39525426-39525445 | MS.gene055162:intron | 40.0% | |
| TTGTAATGGTTGGAGCTGTT+TGG | + | chr7.4:39527674-39527693 | MS.gene055162:intron | 40.0% | |
| TTGTTTGCATGGGTAATGAG+AGG | + | chr7.4:39525937-39525956 | MS.gene055162:intron | 40.0% | |
| ! | AGGGAGGAAAGAAACAGTTT+TGG | + | chr7.4:39523498-39523517 | MS.gene055162:CDS | 40.0% |
| ! | AGTATTGGGGGCTTAACTTT+AGG | + | chr7.4:39523941-39523960 | MS.gene055162:intron | 40.0% |
| ! | CCCAAAATGCCTTAAGGTTT+TGG | + | chr7.4:39525273-39525292 | MS.gene055162:intron | 40.0% |
| ! | GAATTACAGTTTTCCAAGGG+TGG | - | chr7.4:39526917-39526936 | None:intergenic | 40.0% |
| ! | GTCTGATCAGTGGTTTTCAA+CGG | - | chr7.4:39527241-39527260 | None:intergenic | 40.0% |
| !! | ACTTGTTTTCCGCCAAATAC+GGG | - | chr7.4:39524855-39524874 | None:intergenic | 40.0% |
| !! | ATCACTTTTATGGTGGTGTC+CGG | + | chr7.4:39523828-39523847 | MS.gene055162:intron | 40.0% |
| !! | CCCAAAACCTTAAGGCATTT+TGG | - | chr7.4:39525277-39525296 | None:intergenic | 40.0% |
| !! | CGGCTTAATCACTTTTATGG+TGG | + | chr7.4:39523821-39523840 | MS.gene055162:intron | 40.0% |
| !! | TCACTTACGCTAAGTATTGG+GGG | + | chr7.4:39523929-39523948 | MS.gene055162:intron | 40.0% |
| AACAATGGCATCAGAGCCAA+TGG | + | chr7.4:39525376-39525395 | MS.gene055162:intron | 45.0% | |
| AACCCCTTTCTTCAACCAGA+TGG | + | chr7.4:39528023-39528042 | MS.gene055162:CDS | 45.0% | |
| AACCTGAGATTGCAGTGTTG+AGG | + | chr7.4:39527579-39527598 | MS.gene055162:intron | 45.0% | |
| ACCCAAAACCTTAAGGCATG+GGG | - | chr7.4:39525593-39525612 | None:intergenic | 45.0% | |
| ACCCCTTTCTTCAACCAGAT+GGG | + | chr7.4:39528024-39528043 | MS.gene055162:CDS | 45.0% | |
| ACCTTAAGGCATGGGGTTTA+TGG | - | chr7.4:39525586-39525605 | None:intergenic | 45.0% | |
| ACGAGAGAGTCTTCTATGAC+TGG | - | chr7.4:39525846-39525865 | None:intergenic | 45.0% | |
| AGACTTTCGACACAAGAAGC+CGG | - | chr7.4:39525424-39525443 | None:intergenic | 45.0% | |
| AGCTAGAAACCGATCCAAAC+TGG | - | chr7.4:39524126-39524145 | None:intergenic | 45.0% | |
| AGTAACTCCCTTCTCAAGCA+TGG | - | chr7.4:39527005-39527024 | None:intergenic | 45.0% | |
| ATGGGTCATGACAGTTTAGC+TGG | - | chr7.4:39527443-39527462 | None:intergenic | 45.0% | |
| CAGTCACTCAACATGGACAA+AGG | + | chr7.4:39526709-39526728 | MS.gene055162:intron | 45.0% | |
| CCAATAGAGCAAGCAACCAA+CGG | + | chr7.4:39525767-39525786 | MS.gene055162:intron | 45.0% | |
| CCTTAAGGCATGGGGTTTAT+GGG | - | chr7.4:39525585-39525604 | None:intergenic | 45.0% | |
| GAAAGTCTACTGGACAATGG+TGG | + | chr7.4:39525436-39525455 | MS.gene055162:intron | 45.0% | |
| GAACCCAAAACCTTAAGGCA+TGG | - | chr7.4:39525595-39525614 | None:intergenic | 45.0% | |
| GAAGCTGTTGAGTTTCTGAG+AGG | + | chr7.4:39526040-39526059 | MS.gene055162:CDS | 45.0% | |
| GATGCCATTGTTGGGTTATG+AGG | - | chr7.4:39525368-39525387 | None:intergenic | 45.0% | |
| GCCCAATGTTTGCCTTTACA+CGG | + | chr7.4:39524057-39524076 | MS.gene055162:intron | 45.0% | |
| GGTAAACACTACATCGTACC+AGG | + | chr7.4:39526061-39526080 | MS.gene055162:intron | 45.0% | |
| GTCATGACAGTTTAGCTGGT+TGG | - | chr7.4:39527439-39527458 | None:intergenic | 45.0% | |
| GTCCGTGTAAAGGCAAACAT+TGG | - | chr7.4:39524062-39524081 | None:intergenic | 45.0% | |
| GTCGAAAGTCTACTGGACAA+TGG | + | chr7.4:39525433-39525452 | MS.gene055162:intron | 45.0% | |
| GTGTGTAGCTTCAAACTTGC+AGG | - | chr7.4:39527819-39527838 | None:intergenic | 45.0% | |
| TACCAACTGAGCTAAGCTCA+CGG | + | chr7.4:39523891-39523910 | MS.gene055162:intron | 45.0% | |
| TCACTGTGAAAACAAGGTCC+TGG | - | chr7.4:39526082-39526101 | None:intergenic | 45.0% | |
| TGACTCATTAAGGGCCTGTT+TGG | + | chr7.4:39524268-39524287 | MS.gene055162:intron | 45.0% | |
| TGAGTGACTGTCTATCAAGC+AGG | - | chr7.4:39526699-39526718 | None:intergenic | 45.0% | |
| TGCAATCTCATCGGTACCAT+CGG | - | chr7.4:39528003-39528022 | None:intergenic | 45.0% | |
| TGCCATTGTTGGGTTATGAG+GGG | - | chr7.4:39525366-39525385 | None:intergenic | 45.0% | |
| TGCTCCCACAACTTCTTTGA+TGG | - | chr7.4:39525715-39525734 | None:intergenic | 45.0% | |
| TGGATTACCTTGTCTACCAC+CGG | - | chr7.4:39523566-39523585 | None:intergenic | 45.0% | |
| TGGTTGAACAAGAGTTCGAC+CGG | + | chr7.4:39525396-39525415 | MS.gene055162:intron | 45.0% | |
| TTGACACCCACCACATGAAT+GGG | - | chr7.4:39525475-39525494 | None:intergenic | 45.0% | |
| TTGTTAGGAAACTGGTGGTC+AGG | + | chr7.4:39525625-39525644 | MS.gene055162:intron | 45.0% | |
| ! | AACCCCATGCCTTAAGGTTT+TGG | + | chr7.4:39525588-39525607 | MS.gene055162:intron | 45.0% |
| ! | ACCCCATGCCTTAAGGTTTT+GGG | + | chr7.4:39525589-39525608 | MS.gene055162:intron | 45.0% |
| ! | CAAAGAAGTTGTGGGAGCAT+AGG | + | chr7.4:39525716-39525735 | MS.gene055162:intron | 45.0% |
| ! | GAGTAGTGGCTCTGTTGTAA+AGG | - | chr7.4:39524624-39524643 | None:intergenic | 45.0% |
| ! | GGTGTTCAAGTTAAGCTCAC+CGG | + | chr7.4:39523544-39523563 | MS.gene055162:CDS | 45.0% |
| ! | GTGGTTTTCAACGGATCATC+AGG | - | chr7.4:39527232-39527251 | None:intergenic | 45.0% |
| !! | ATTCATGTGGTGGGTGTCAA+CGG | + | chr7.4:39525475-39525494 | MS.gene055162:intron | 45.0% |
| !! | ATTGGCTCTGATGCCATTGT+TGG | - | chr7.4:39525377-39525396 | None:intergenic | 45.0% |
| !! | GCTCCCTATTGGTCTTTCAA+TGG | + | chr7.4:39524980-39524999 | MS.gene055162:intron | 45.0% |
| !! | GGGGCGTTTTTGTTGAGAAT+GGG | + | chr7.4:39523990-39524009 | MS.gene055162:intron | 45.0% |
| !! | TCACTTTTATGGTGGTGTCC+GGG | + | chr7.4:39523829-39523848 | MS.gene055162:intron | 45.0% |
| !! | TGGGGCGTTTTTGTTGAGAA+TGG | + | chr7.4:39523989-39524008 | MS.gene055162:intron | 45.0% |
| !! | TTGGCTCTGATGCCATTGTT+GGG | - | chr7.4:39525376-39525395 | None:intergenic | 45.0% |
| !! | ATAAAAAATAATAATTAAAG+AGG | - | chr7.4:39523717-39523736 | None:intergenic | 5.0% |
| !!! | CTTTAATTATTATTTTTTAT+AGG | + | chr7.4:39523717-39523736 | MS.gene055162:intron | 5.0% |
| ACCAACTGAGCTAAGCTCAC+GGG | + | chr7.4:39523892-39523911 | MS.gene055162:intron | 50.0% | |
| ACTGGACAATGGTGGTCAAG+CGG | + | chr7.4:39525444-39525463 | MS.gene055162:intron | 50.0% | |
| ATCTCATCGGTACCATCGGT+TGG | - | chr7.4:39527999-39528018 | None:intergenic | 50.0% | |
| CAACAGCTTCGTCCAGTACA+AGG | - | chr7.4:39526030-39526049 | None:intergenic | 50.0% | |
| CCCATAAACCCCATGCCTTA+AGG | + | chr7.4:39525582-39525601 | MS.gene055162:intron | 50.0% | |
| CCCCATCTGGTTGAAGAAAG+GGG | - | chr7.4:39528028-39528047 | None:intergenic | 50.0% | |
| CCCCTTTCTTCAACCAGATG+GGG | + | chr7.4:39528025-39528044 | MS.gene055162:CDS | 50.0% | |
| CTCCCCTCATAACCCAACAA+TGG | + | chr7.4:39525361-39525380 | MS.gene055162:intron | 50.0% | |
| CTCCTCAACACTGCAATCTC+AGG | - | chr7.4:39527584-39527603 | None:intergenic | 50.0% | |
| CTCCTTTGTGTGCTCCCTAT+TGG | + | chr7.4:39524969-39524988 | MS.gene055162:intron | 50.0% | |
| GAGAAGCCGCGCATATTGTT+AGG | - | chr7.4:39524952-39524971 | None:intergenic | 50.0% | |
| GAGCAACCACACAAGTGAGT+TGG | - | chr7.4:39525314-39525333 | None:intergenic | 50.0% | |
| GAGTGATTTGAGTGGTAGGG+AGG | - | chr7.4:39525800-39525819 | None:intergenic | 50.0% | |
| GCCCCATCTGGTTGAAGAAA+GGG | - | chr7.4:39528029-39528048 | None:intergenic | 50.0% | |
| GGTTGAACAAGAGTTCGACC+GGG | + | chr7.4:39525397-39525416 | MS.gene055162:intron | 50.0% | |
| GTTGACACCCACCACATGAA+TGG | - | chr7.4:39525476-39525495 | None:intergenic | 50.0% | |
| TGGTGTCCAACTCACTTGTG+TGG | + | chr7.4:39525305-39525324 | MS.gene055162:intron | 50.0% | |
| TGGTTGCTCTTGACCCAATG+TGG | + | chr7.4:39525325-39525344 | MS.gene055162:intron | 50.0% | |
| TGTTGTGGCAAGTGTGTGTG+TGG | + | chr7.4:39525181-39525200 | MS.gene055162:intron | 50.0% | |
| ! | AGGGTGGATTTACCAACTGC+AGG | - | chr7.4:39526901-39526920 | None:intergenic | 50.0% |
| ! | CCGTTGGTTGCTTGCTCTAT+TGG | - | chr7.4:39525770-39525789 | None:intergenic | 50.0% |
| ! | GACCAATAGGGAGCACACAA+AGG | - | chr7.4:39524974-39524993 | None:intergenic | 50.0% |
| ! | GTTCAAGTTAAGCTCACCGG+TGG | + | chr7.4:39523547-39523566 | MS.gene055162:CDS | 50.0% |
| ! | TCTCATCGGTACCATCGGTT+GGG | - | chr7.4:39527998-39528017 | None:intergenic | 50.0% |
| ! | TGCAGTGTTGAGGAGTTGCA+AGG | + | chr7.4:39527589-39527608 | MS.gene055162:intron | 50.0% |
| !! | CACTTTTATGGTGGTGTCCG+GGG | + | chr7.4:39523830-39523849 | MS.gene055162:intron | 50.0% |
| !! | GCAGTTGGTAAATCCACCCT+TGG | + | chr7.4:39526901-39526920 | MS.gene055162:intron | 50.0% |
| !! | GGCGGAAAACAAGTTGGTGT+GGG | + | chr7.4:39524861-39524880 | MS.gene055162:intron | 50.0% |
| !! | TGGCGGAAAACAAGTTGGTG+TGG | + | chr7.4:39524860-39524879 | MS.gene055162:intron | 50.0% |
| AACAAGAGTTCGACCGGGAC+CGG | + | chr7.4:39525402-39525421 | MS.gene055162:intron | 55.0% | |
| AAGCTCACCGGTGGTAGACA+AGG | + | chr7.4:39523556-39523575 | MS.gene055162:CDS | 55.0% | |
| AAGGTCTGTGGTTCGAACCC+CGG | - | chr7.4:39523850-39523869 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+GGG | + | chr7.4:39523893-39523912 | MS.gene055162:intron | 55.0% | |
| CCTGGGGGATCATCCACATT+GGG | - | chr7.4:39525341-39525360 | None:intergenic | 55.0% | |
| CGCCCCATCTGGTTGAAGAA+AGG | - | chr7.4:39528030-39528049 | None:intergenic | 55.0% | |
| GCAGGTCCCATTCATGTGGT+GGG | + | chr7.4:39525466-39525485 | MS.gene055162:intron | 55.0% | |
| GTAGGGAGGTTGTAAGCCGT+TGG | - | chr7.4:39525786-39525805 | None:intergenic | 55.0% | |
| TGTCAACGGTGGTACGAGTG+AGG | + | chr7.4:39525489-39525508 | MS.gene055162:intron | 55.0% | |
| TTGGGTTATGAGGGGAGCCT+GGG | - | chr7.4:39525358-39525377 | None:intergenic | 55.0% | |
| ! | CTCATCGGTACCATCGGTTG+GGG | - | chr7.4:39527997-39528016 | None:intergenic | 55.0% |
| AGCGGCAGGTCCCATTCATG+TGG | + | chr7.4:39525462-39525481 | MS.gene055162:intron | 60.0% | |
| ATGCTCGTGTCCCCAACCGA+TGG | + | chr7.4:39527984-39528003 | MS.gene055162:CDS | 60.0% | |
| CCCAATGTGGATGATCCCCC+AGG | + | chr7.4:39525338-39525357 | MS.gene055162:intron | 60.0% | |
| CCCCGTGAGCTTAGCTCAGT+TGG | - | chr7.4:39523896-39523915 | None:intergenic | 60.0% | |
| GACAATGGTGGTCAAGCGGC+AGG | + | chr7.4:39525448-39525467 | MS.gene055162:intron | 60.0% | |
| GCCTGGGGGATCATCCACAT+TGG | - | chr7.4:39525342-39525361 | None:intergenic | 60.0% | |
| GCTAAGCTCACGGGGACTCA+CGG | + | chr7.4:39523901-39523920 | MS.gene055162:intron | 60.0% | |
| GGCAGGTCCCATTCATGTGG+TGG | + | chr7.4:39525465-39525484 | MS.gene055162:intron | 60.0% | |
| GTTGGGTTATGAGGGGAGCC+TGG | - | chr7.4:39525359-39525378 | None:intergenic | 60.0% | |
| TCGACACAAGAAGCCGGTCC+CGG | - | chr7.4:39525418-39525437 | None:intergenic | 60.0% | |
| TGGGTTATGAGGGGAGCCTG+GGG | - | chr7.4:39525357-39525376 | None:intergenic | 60.0% | |
| !! | CATGTGGTGGGTGTCAACGG+TGG | + | chr7.4:39525478-39525497 | MS.gene055162:intron | 60.0% |
| GGGTTATGAGGGGAGCCTGG+GGG | - | chr7.4:39525356-39525375 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 39523391 | 39528052 | 39523391 | ID=MS.gene055162 |
| chr7.4 | mRNA | 39523391 | 39528052 | 39523391 | ID=MS.gene055162.t1;Parent=MS.gene055162 |
| chr7.4 | exon | 39523391 | 39523393 | 39523391 | ID=MS.gene055162.t1.exon1;Parent=MS.gene055162.t1 |
| chr7.4 | CDS | 39523391 | 39523393 | 39523391 | ID=cds.MS.gene055162.t1;Parent=MS.gene055162.t1 |
| chr7.4 | exon | 39523496 | 39523577 | 39523496 | ID=MS.gene055162.t1.exon2;Parent=MS.gene055162.t1 |
| chr7.4 | CDS | 39523496 | 39523577 | 39523496 | ID=cds.MS.gene055162.t1;Parent=MS.gene055162.t1 |
| chr7.4 | exon | 39525990 | 39526061 | 39525990 | ID=MS.gene055162.t1.exon3;Parent=MS.gene055162.t1 |
| chr7.4 | CDS | 39525990 | 39526061 | 39525990 | ID=cds.MS.gene055162.t1;Parent=MS.gene055162.t1 |
| chr7.4 | exon | 39527227 | 39527279 | 39527227 | ID=MS.gene055162.t1.exon4;Parent=MS.gene055162.t1 |
| chr7.4 | CDS | 39527227 | 39527279 | 39527227 | ID=cds.MS.gene055162.t1;Parent=MS.gene055162.t1 |
| chr7.4 | exon | 39527963 | 39528052 | 39527963 | ID=MS.gene055162.t1.exon5;Parent=MS.gene055162.t1 |
| chr7.4 | CDS | 39527963 | 39528052 | 39527963 | ID=cds.MS.gene055162.t1;Parent=MS.gene055162.t1 |
| Gene Sequence |
| Protein sequence |
