Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32660.t1 | XP_024633416.1 | 93.6 | 575 | 33 | 1 | 1 | 571 | 1 | 575 | 3.70E-306 | 1060.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32660.t1 | A0JJX5 | 69.6 | 570 | 170 | 1 | 1 | 570 | 1 | 567 | 7.0e-237 | 821.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32660.t1 | G7JAG6 | 91.8 | 575 | 33 | 2 | 1 | 571 | 1 | 565 | 4.6e-298 | 1032.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049609 | MS.gene32660 | 0.801506 | 8.72E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene32660 | 0.802114 | 6.54E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene32660 | 0.809601 | 1.75E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene32660 | 0.801541 | 8.58E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene32660 | 0.800594 | 1.34E-48 | -1.69E-46 |
| MS.gene060835 | MS.gene32660 | 0.806706 | 7.22E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene32660 | 0.800267 | 1.56E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32660.t1 | MTR_3g106660 | 96.696 | 575 | 5 | 2 | 1 | 571 | 1 | 565 | 0.0 | 1120 |
| MS.gene32660.t1 | MTR_4g115660 | 71.223 | 556 | 155 | 2 | 15 | 570 | 15 | 565 | 0.0 | 856 |
| MS.gene32660.t1 | MTR_8g035590 | 39.024 | 410 | 234 | 10 | 1 | 404 | 1 | 400 | 1.80e-88 | 283 |
| MS.gene32660.t1 | MTR_8g035590 | 39.175 | 97 | 58 | 1 | 445 | 541 | 263 | 358 | 4.26e-13 | 72.4 |
| MS.gene32660.t1 | MTR_7g075790 | 37.150 | 428 | 252 | 11 | 1 | 422 | 1 | 417 | 1.80e-87 | 280 |
| MS.gene32660.t1 | MTR_7g075790 | 36.000 | 100 | 61 | 2 | 445 | 544 | 262 | 358 | 2.51e-11 | 66.6 |
| MS.gene32660.t1 | MTR_1g025550 | 29.268 | 574 | 342 | 16 | 1 | 562 | 11 | 532 | 3.43e-69 | 233 |
| MS.gene32660.t1 | MTR_4g073400 | 28.114 | 562 | 350 | 14 | 9 | 562 | 19 | 534 | 7.89e-66 | 224 |
| MS.gene32660.t1 | MTR_1g094810 | 26.224 | 572 | 366 | 15 | 1 | 562 | 1 | 526 | 4.05e-56 | 197 |
| MS.gene32660.t1 | MTR_8g104330 | 22.649 | 521 | 335 | 18 | 76 | 560 | 103 | 591 | 4.59e-14 | 75.9 |
| MS.gene32660.t1 | MTR_8g104330 | 22.649 | 521 | 335 | 18 | 76 | 560 | 103 | 591 | 7.96e-14 | 75.1 |
| MS.gene32660.t1 | MTR_8g104330 | 22.364 | 550 | 355 | 19 | 51 | 560 | 21 | 538 | 1.37e-13 | 74.3 |
| MS.gene32660.t1 | MTR_8g032300 | 32.031 | 128 | 83 | 2 | 445 | 569 | 3 | 129 | 1.49e-13 | 68.6 |
| MS.gene32660.t1 | MTR_2g072180 | 23.030 | 330 | 226 | 12 | 66 | 373 | 65 | 388 | 1.99e-13 | 73.9 |
| MS.gene32660.t1 | MTR_6g084400 | 23.136 | 523 | 335 | 24 | 76 | 560 | 101 | 594 | 4.30e-13 | 72.8 |
| MS.gene32660.t1 | MTR_8g032320 | 32.283 | 127 | 80 | 4 | 445 | 567 | 3 | 127 | 5.81e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32660.t1 | AT1G05500 | 69.825 | 570 | 161 | 4 | 1 | 570 | 1 | 559 | 0.0 | 848 |
| MS.gene32660.t1 | AT1G05500 | 72.209 | 421 | 111 | 2 | 150 | 570 | 1 | 415 | 0.0 | 641 |
| MS.gene32660.t1 | AT3G61050 | 39.756 | 410 | 230 | 11 | 1 | 404 | 1 | 399 | 9.33e-90 | 286 |
| MS.gene32660.t1 | AT3G61050 | 39.756 | 410 | 230 | 11 | 1 | 404 | 1 | 399 | 9.33e-90 | 286 |
| MS.gene32660.t1 | AT2G20990 | 30.420 | 572 | 341 | 13 | 2 | 562 | 12 | 537 | 2.39e-74 | 246 |
| MS.gene32660.t1 | AT5G04220 | 27.130 | 575 | 360 | 14 | 1 | 563 | 11 | 538 | 2.70e-70 | 236 |
| MS.gene32660.t1 | AT5G04220 | 29.109 | 505 | 312 | 13 | 71 | 563 | 6 | 476 | 3.05e-70 | 234 |
| MS.gene32660.t1 | AT2G20990 | 29.195 | 596 | 341 | 14 | 2 | 562 | 12 | 561 | 1.45e-69 | 234 |
| MS.gene32660.t1 | AT2G20990 | 28.525 | 610 | 341 | 14 | 2 | 562 | 12 | 575 | 6.87e-67 | 228 |
| MS.gene32660.t1 | AT1G20080 | 29.123 | 570 | 349 | 16 | 1 | 562 | 11 | 533 | 3.67e-66 | 224 |
| MS.gene32660.t1 | AT1G20080 | 29.123 | 570 | 349 | 16 | 1 | 562 | 11 | 533 | 3.67e-66 | 224 |
| MS.gene32660.t1 | AT1G20080 | 29.123 | 570 | 349 | 16 | 1 | 562 | 11 | 533 | 3.67e-66 | 224 |
| MS.gene32660.t1 | AT1G20080 | 29.123 | 570 | 349 | 16 | 1 | 562 | 11 | 533 | 3.67e-66 | 224 |
| MS.gene32660.t1 | AT1G20080 | 29.123 | 570 | 349 | 16 | 1 | 562 | 11 | 533 | 3.67e-66 | 224 |
| MS.gene32660.t1 | AT3G61030 | 33.224 | 304 | 140 | 7 | 74 | 373 | 39 | 283 | 6.79e-39 | 149 |
| MS.gene32660.t1 | AT3G60950 | 33.770 | 305 | 144 | 8 | 74 | 373 | 39 | 290 | 4.33e-38 | 149 |
| MS.gene32660.t1 | AT5G04220 | 28.198 | 344 | 205 | 10 | 231 | 563 | 4 | 316 | 1.45e-33 | 130 |
| MS.gene32660.t1 | AT5G11100 | 72.464 | 69 | 19 | 0 | 1 | 69 | 1 | 69 | 2.27e-28 | 108 |
| MS.gene32660.t1 | AT2G21010 | 28.571 | 287 | 161 | 7 | 285 | 562 | 1 | 252 | 3.29e-23 | 99.8 |
| MS.gene32660.t1 | AT3G14590 | 25.982 | 331 | 213 | 13 | 66 | 371 | 61 | 384 | 1.54e-17 | 87.0 |
| MS.gene32660.t1 | AT3G14590 | 25.982 | 331 | 213 | 13 | 66 | 371 | 30 | 353 | 2.16e-17 | 86.3 |
| MS.gene32660.t1 | AT1G53590 | 25.455 | 330 | 215 | 12 | 66 | 371 | 61 | 383 | 2.18e-17 | 86.3 |
| MS.gene32660.t1 | AT3G14590 | 25.982 | 331 | 213 | 13 | 66 | 371 | 16 | 339 | 2.73e-17 | 85.9 |
| MS.gene32660.t1 | AT5G47710 | 38.710 | 93 | 52 | 4 | 446 | 537 | 6 | 94 | 7.14e-11 | 61.6 |
| MS.gene32660.t1 | AT5G47710 | 35.417 | 96 | 57 | 3 | 264 | 359 | 3 | 93 | 8.17e-11 | 61.2 |
| MS.gene32660.t1 | AT5G47710 | 38.710 | 93 | 52 | 4 | 446 | 537 | 6 | 94 | 7.14e-11 | 61.6 |
| MS.gene32660.t1 | AT5G47710 | 35.417 | 96 | 57 | 3 | 264 | 359 | 3 | 93 | 8.17e-11 | 61.2 |
| MS.gene32660.t1 | AT5G47710 | 38.710 | 93 | 52 | 4 | 446 | 537 | 6 | 94 | 7.14e-11 | 61.6 |
| MS.gene32660.t1 | AT5G47710 | 35.417 | 96 | 57 | 3 | 264 | 359 | 3 | 93 | 8.17e-11 | 61.2 |
| MS.gene32660.t1 | AT5G47710 | 38.710 | 93 | 52 | 4 | 446 | 537 | 6 | 94 | 7.14e-11 | 61.6 |
| MS.gene32660.t1 | AT5G47710 | 35.417 | 96 | 57 | 3 | 264 | 359 | 3 | 93 | 8.17e-11 | 61.2 |
Find 129 sgRNAs with CRISPR-Local
Find 416 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACGACGAAACATTTATTT+TGG | 0.171076 | 3.1:-84554150 | MS.gene32660:CDS |
| GTAGCTGAATTCCCTGCTTT+TGG | 0.202294 | 3.1:-84558645 | MS.gene32660:CDS |
| GTTTCATAATACAGTTAAAT+TGG | 0.210321 | 3.1:-84560209 | MS.gene32660:intron |
| TTATCAAATAAAGATATAAT+TGG | 0.225221 | 3.1:-84556297 | MS.gene32660:CDS |
| TAGATGCAAATTAATCTTTC+CGG | 0.225840 | 3.1:+84554115 | None:intergenic |
| CTATAATCTCCTGGTATAAT+TGG | 0.227622 | 3.1:+84557121 | None:intergenic |
| CCCTATATTTGTTATCTTTG+TGG | 0.227841 | 3.1:+84555915 | None:intergenic |
| TAAGGATGTATGGTTGAAAT+TGG | 0.248081 | 3.1:-84555954 | MS.gene32660:CDS |
| CATCACTAGCTCCATTCTTC+AGG | 0.250724 | 3.1:+84555612 | None:intergenic |
| ACATGCTAATTGTTGAACTA+TGG | 0.255342 | 3.1:-84555079 | MS.gene32660:CDS |
| TACCAGGTTCAAGTTCCTTT+AGG | 0.260530 | 3.1:+84555981 | None:intergenic |
| TTCCAACGGGTTTCAATTCT+AGG | 0.261515 | 3.1:+84556352 | None:intergenic |
| ACCAGGTTCAAGTTCCTTTA+GGG | 0.268256 | 3.1:+84555982 | None:intergenic |
| TCAAAGTGCTCATTCCATAT+TGG | 0.273324 | 3.1:+84556103 | None:intergenic |
| CAAAGTGCTCATTCCATATT+GGG | 0.278817 | 3.1:+84556104 | None:intergenic |
| ATTCAAGCAGCTGAGCTTAT+TGG | 0.281979 | 3.1:-84556019 | MS.gene32660:CDS |
| CCACAAAGATAACAAATATA+GGG | 0.305796 | 3.1:-84555915 | MS.gene32660:CDS |
| ATAGCCATTTAGAAAAGATT+TGG | 0.318550 | 3.1:-84560182 | MS.gene32660:CDS |
| ATCCAAGCGTCGCACAGATT+TGG | 0.327002 | 3.1:-84560581 | MS.gene32660:intron |
| GAAAGATTAATTTGCATCTA+AGG | 0.332680 | 3.1:-84554112 | MS.gene32660:CDS |
| CAAGTTCCTTTAGGGAAACT+TGG | 0.335226 | 3.1:+84555990 | None:intergenic |
| TTCATCATCAAAGATTCTTA+TGG | 0.339464 | 3.1:+84556045 | None:intergenic |
| ACAACCAGTTGAACCCAATA+TGG | 0.348413 | 3.1:-84556117 | MS.gene32660:CDS |
| CAATTATACCAGGAGATTAT+AGG | 0.351516 | 3.1:-84557120 | MS.gene32660:intron |
| TCCACAAAGATAACAAATAT+AGG | 0.354043 | 3.1:-84555916 | MS.gene32660:CDS |
| GGCCTATACTGTTCAAGAAT+TGG | 0.356321 | 3.1:+84559989 | None:intergenic |
| AAAGTGTTCTCAACTCCATA+TGG | 0.366653 | 3.1:+84555683 | None:intergenic |
| GAGCTATTGTATTGCCCATA+TGG | 0.372521 | 3.1:-84555698 | MS.gene32660:CDS |
| TCAAATGTTTGATTCCATAC+TGG | 0.372705 | 3.1:+84555128 | None:intergenic |
| GACACTAACCAAGGTCATAT+TGG | 0.373356 | 3.1:-84554180 | MS.gene32660:CDS |
| TTCAATGCAAGGACAACAAA+TGG | 0.375294 | 3.1:+84555461 | None:intergenic |
| AACTCCATTGTCACTCCATT+GGG | 0.380310 | 3.1:+84559604 | None:intergenic |
| CATTCCATATTGGGTTCAAC+TGG | 0.381825 | 3.1:+84556113 | None:intergenic |
| ATGATCATTGGTATTATGAT+TGG | 0.399591 | 3.1:-84560646 | MS.gene32660:CDS |
| TTAATGGCAAGAACAATATC+CGG | 0.399613 | 3.1:+84559559 | None:intergenic |
| TATTATGATTGGTATCATAT+TGG | 0.401913 | 3.1:-84560635 | MS.gene32660:CDS |
| CATACATCCTTAACTTTACC+AGG | 0.405449 | 3.1:+84555965 | None:intergenic |
| ATGAAACTCTAAATCCAGTA+TGG | 0.406146 | 3.1:-84555142 | MS.gene32660:CDS |
| CTTGCCATTAAAACCAAAGT+TGG | 0.415427 | 3.1:-84559547 | MS.gene32660:CDS |
| CTATGGGATCATGACACCTT+TGG | 0.415441 | 3.1:-84555062 | MS.gene32660:CDS |
| TCAATTATTGAAGAGGATAG+TGG | 0.416942 | 3.1:-84559628 | MS.gene32660:CDS |
| TTGCCCATAAAATCTACTAT+TGG | 0.417309 | 3.1:+84555491 | None:intergenic |
| GTTCTACGAACAGAAAGCTT+TGG | 0.431212 | 3.1:-84558307 | MS.gene32660:intron |
| TACCAAATCTGTGCGACGCT+TGG | 0.433233 | 3.1:+84560579 | None:intergenic |
| CTGGTAAAGTTAAGGATGTA+TGG | 0.443093 | 3.1:-84555964 | MS.gene32660:CDS |
| TTCATCAGCGGCATGATCAT+TGG | 0.447948 | 3.1:-84560658 | MS.gene32660:CDS |
| AGTGTAGCTCCACAATTTAC+CGG | 0.448167 | 3.1:-84559923 | MS.gene32660:intron |
| ACTTGAACCTGGTAAAGTTA+AGG | 0.452167 | 3.1:-84555972 | MS.gene32660:CDS |
| TATCAAATAAAGATATAATT+GGG | 0.455578 | 3.1:-84556296 | MS.gene32660:CDS |
| ATCACTAGCTCCATTCTTCA+GGG | 0.457632 | 3.1:+84555613 | None:intergenic |
| AGTGAGTAATCACGGACAAA+AGG | 0.459563 | 3.1:+84555653 | None:intergenic |
| AAACATACGGCTCCAAAAGC+AGG | 0.465709 | 3.1:+84558633 | None:intergenic |
| TATGTAGGCAGCGACAGAAT+TGG | 0.465868 | 3.1:-84560029 | MS.gene32660:intron |
| AGGTAGTACAATACCAACTT+TGG | 0.474835 | 3.1:+84559534 | None:intergenic |
| TTTACTCTTAAGGTTGTTGG+TGG | 0.476146 | 3.1:-84558282 | MS.gene32660:CDS |
| AAACTCCATTGTCACTCCAT+TGG | 0.478756 | 3.1:+84559603 | None:intergenic |
| CATGCTAATTGTTGAACTAT+GGG | 0.481135 | 3.1:-84555078 | MS.gene32660:CDS |
| TTTGACTTCGTTGTGGAGGA+TGG | 0.483304 | 3.1:-84555110 | MS.gene32660:CDS |
| CCATCGAAGACTCTATAACT+TGG | 0.489210 | 3.1:-84557162 | MS.gene32660:CDS |
| TAATGGCAAGAACAATATCC+GGG | 0.489769 | 3.1:+84559560 | None:intergenic |
| TAAATTACCTCATTGACAAA+TGG | 0.491429 | 3.1:+84560159 | None:intergenic |
| AGGAATTTCAATTATTGAAG+AGG | 0.491655 | 3.1:-84559635 | MS.gene32660:CDS |
| ATAAGAATCTTTGATGATGA+AGG | 0.498472 | 3.1:-84556043 | MS.gene32660:CDS |
| CGTACAAATACCATAGCAAA+AGG | 0.499422 | 3.1:+84556264 | None:intergenic |
| TTGTGCCCAAGTTTCCCTAA+AGG | 0.500087 | 3.1:-84555996 | MS.gene32660:CDS |
| TGGAGCTAGTGATGGAGAGG+AGG | 0.501710 | 3.1:-84555603 | MS.gene32660:CDS |
| TTTGAGAAGACCCTGAAGAA+TGG | 0.503236 | 3.1:-84555623 | MS.gene32660:CDS |
| TCAATGCAAGGACAACAAAT+GGG | 0.504694 | 3.1:+84555462 | None:intergenic |
| GGTGATATTTCAACCTTACC+AGG | 0.504767 | 3.1:-84558261 | MS.gene32660:CDS |
| GGACTCCACAACACAAGTAT+CGG | 0.506214 | 3.1:-84554088 | MS.gene32660:CDS |
| GGTTCCCGATACTTGTGTTG+TGG | 0.508001 | 3.1:+84554083 | None:intergenic |
| GAATGGAGCTAGTGATGGAG+AGG | 0.510831 | 3.1:-84555606 | MS.gene32660:CDS |
| CAAATCTAACCGGTAAATTG+TGG | 0.511215 | 3.1:+84559914 | None:intergenic |
| CAATTATTGAAGAGGATAGT+GGG | 0.511457 | 3.1:-84559627 | MS.gene32660:CDS |
| TCCCTAAAGGAACTTGAACC+TGG | 0.513783 | 3.1:-84555983 | MS.gene32660:CDS |
| TGGTATTGTACTACCTGTGC+AGG | 0.515210 | 3.1:-84559527 | MS.gene32660:intron |
| AACCTAGAATTGAAACCCGT+TGG | 0.515395 | 3.1:-84556354 | MS.gene32660:CDS |
| CATGCAGTGGGATGGTAACC+CGG | 0.523776 | 3.1:-84559578 | MS.gene32660:CDS |
| AAAAGCAACGTGATTGTAAG+AGG | 0.527447 | 3.1:-84555551 | MS.gene32660:CDS |
| TTCCCCTTCCAATATGACCT+TGG | 0.528006 | 3.1:+84554172 | None:intergenic |
| GATTTGGCCATTTGTCAATG+AGG | 0.532036 | 3.1:-84560166 | MS.gene32660:intron |
| AGGGGTATCTGAAGCTATTG+AGG | 0.532324 | 3.1:-84558241 | MS.gene32660:intron |
| GACTCCACAACACAAGTATC+GGG | 0.532416 | 3.1:-84554087 | MS.gene32660:CDS |
| TTTACATCTAGTGTTCCAAC+GGG | 0.536494 | 3.1:+84556339 | None:intergenic |
| TATTTGTGAGTTACCTGCAC+AGG | 0.537898 | 3.1:+84559514 | None:intergenic |
| GTGAGTAATCACGGACAAAA+GGG | 0.539859 | 3.1:+84555654 | None:intergenic |
| AACATTTGACTTCGTTGTGG+AGG | 0.540606 | 3.1:-84555114 | MS.gene32660:CDS |
| AAGTTCCTTTAGGGAAACTT+GGG | 0.541025 | 3.1:+84555991 | None:intergenic |
| AAGTGTTCTCAACTCCATAT+GGG | 0.543902 | 3.1:+84555684 | None:intergenic |
| ATTGGTATGACTTTACGTAC+TGG | 0.546596 | 3.1:+84557139 | None:intergenic |
| ACTAGATGTAAAACTAGTGC+AGG | 0.552199 | 3.1:-84556328 | MS.gene32660:CDS |
| CTGAAGAATGGAGCTAGTGA+TGG | 0.552780 | 3.1:-84555611 | MS.gene32660:CDS |
| AGCTTCAGATACCCCTGGTA+AGG | 0.556357 | 3.1:+84558248 | None:intergenic |
| AACCAAGGTCATATTGGAAG+GGG | 0.557907 | 3.1:-84554174 | MS.gene32660:CDS |
| AAGAGGTGTTACCTTTCCAA+AGG | 0.567179 | 3.1:+84555046 | None:intergenic |
| TCAACCAACATAGGTGCACT+TGG | 0.569224 | 3.1:-84555720 | MS.gene32660:intron |
| CTAACCAAGGTCATATTGGA+AGG | 0.572168 | 3.1:-84554176 | MS.gene32660:CDS |
| CACAAAGATAACAAATATAG+GGG | 0.582883 | 3.1:-84555914 | MS.gene32660:CDS |
| CTTCAGGGTCTTCTCAAACG+TGG | 0.584476 | 3.1:+84555628 | None:intergenic |
| AGATTAATTTGCATCTAAGG+TGG | 0.585512 | 3.1:-84554109 | MS.gene32660:CDS |
| AACCAATTCTTGAACAGTAT+AGG | 0.590824 | 3.1:-84559991 | MS.gene32660:CDS |
| TCAAACATTTGACTTCGTTG+TGG | 0.592573 | 3.1:-84555117 | MS.gene32660:CDS |
| AGCTACACTACCGAGTGTAA+AGG | 0.597083 | 3.1:+84559937 | None:intergenic |
| AGATAACAAATATAGGGGTG+AGG | 0.599072 | 3.1:-84555909 | MS.gene32660:intron |
| AACATACGGCTCCAAAAGCA+GGG | 0.602168 | 3.1:+84558634 | None:intergenic |
| TCAATAGCTTCAGATACCCC+TGG | 0.603196 | 3.1:+84558243 | None:intergenic |
| TAACCAAGGTCATATTGGAA+GGG | 0.610238 | 3.1:-84554175 | MS.gene32660:CDS |
| TGGGCCCAATGGAGTGACAA+TGG | 0.612832 | 3.1:-84559608 | MS.gene32660:CDS |
| GGATCATGACACCTTTGGAA+AGG | 0.616757 | 3.1:-84555057 | MS.gene32660:intron |
| TCTTGAACAGTATAGGCCAG+TGG | 0.616798 | 3.1:-84559984 | MS.gene32660:CDS |
| GAAGAGGATAGTGGGCCCAA+TGG | 0.618971 | 3.1:-84559619 | MS.gene32660:CDS |
| GTGAGAGAAGACAAAACCAC+TGG | 0.619356 | 3.1:+84559968 | None:intergenic |
| GCAGGGAATTCAGCTACAAG+AGG | 0.621383 | 3.1:+84558651 | None:intergenic |
| CAATGGAGTTTGACATGCAG+TGG | 0.622659 | 3.1:-84559591 | MS.gene32660:CDS |
| GATTGTAAGAGGAGTTCTAT+CGG | 0.623571 | 3.1:-84555540 | MS.gene32660:CDS |
| TGAGTAAATACCACCCATGA+CGG | 0.628185 | 3.1:+84560329 | None:intergenic |
| ACGTGGTTAGTGAGTAATCA+CGG | 0.632160 | 3.1:+84555645 | None:intergenic |
| AGACAATAGCAAAGTTTGCG+AGG | 0.643310 | 3.1:-84560397 | MS.gene32660:CDS |
| GTGATATTTCAACCTTACCA+GGG | 0.644897 | 3.1:-84558260 | MS.gene32660:CDS |
| CCAAGTTATAGAGTCTTCGA+TGG | 0.645168 | 3.1:+84557162 | None:intergenic |
| GAGTTTGACATGCAGTGGGA+TGG | 0.668125 | 3.1:-84559586 | MS.gene32660:CDS |
| TGATATTTCAACCTTACCAG+GGG | 0.668860 | 3.1:-84558259 | MS.gene32660:CDS |
| ATAACTCAATATCATCATCA+CGG | 0.671798 | 3.1:-84555577 | MS.gene32660:CDS |
| GTTTGCGAGGATGACAGTGG+AGG | 0.672019 | 3.1:-84560384 | MS.gene32660:CDS |
| AATGGAGTTTGACATGCAGT+GGG | 0.687587 | 3.1:-84559590 | MS.gene32660:CDS |
| AAAGTCATACCAATTATACC+AGG | 0.699575 | 3.1:-84557130 | MS.gene32660:CDS |
| AAAGTTTGCGAGGATGACAG+TGG | 0.718765 | 3.1:-84560387 | MS.gene32660:CDS |
| AGTGATCATGACACTAACCA+AGG | 0.719607 | 3.1:-84554189 | MS.gene32660:CDS |
| ACTCAATATCATCATCACGG+AGG | 0.757668 | 3.1:-84555574 | MS.gene32660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTAATTTAAAAATA+TGG | + | chr3.1:84555424-84555443 | None:intergenic | 0.0% |
| !! | AAATAAATAAATAATAAATA+GGG | + | chr3.1:84558548-84558567 | None:intergenic | 0.0% |
| !! | AATATTTATATAATATATAT+TGG | + | chr3.1:84560200-84560219 | None:intergenic | 0.0% |
| !! | AAATTAATTTAAAAATATGG+AGG | + | chr3.1:84555421-84555440 | None:intergenic | 10.0% |
| !! | AATTAATTTAAAAATATGGA+GGG | + | chr3.1:84555420-84555439 | None:intergenic | 10.0% |
| !! | ATATATAAATTTGTCTAATA+AGG | + | chr3.1:84555557-84555576 | None:intergenic | 10.0% |
| !! | ATGAAAATTGAAATATTTAT+AGG | - | chr3.1:84555936-84555955 | MS.gene32660:CDS | 10.0% |
| !! | GATATGTTAAAATATAAAAT+GGG | - | chr3.1:84557184-84557203 | MS.gene32660:intron | 10.0% |
| !! | TATCAAATAAAGATATAATT+GGG | - | chr3.1:84558447-84558466 | MS.gene32660:intron | 10.0% |
| !! | TCAATTAAAAAAAAACTAAA+AGG | - | chr3.1:84557096-84557115 | MS.gene32660:intron | 10.0% |
| !! | TGAAAATTGAAATATTTATA+GGG | - | chr3.1:84555937-84555956 | MS.gene32660:CDS | 10.0% |
| !! | TTATCAAATAAAGATATAAT+TGG | - | chr3.1:84558446-84558465 | MS.gene32660:intron | 10.0% |
| !! | TTTATATAGGTAAAAAATAT+TGG | - | chr3.1:84556038-84556057 | MS.gene32660:CDS | 10.0% |
| !!! | AAAATAATTCAAAGTTTTAA+AGG | - | chr3.1:84555755-84555774 | MS.gene32660:intron | 10.0% |
| !!! | ATCTATAACAAAATTTATTT+TGG | + | chr3.1:84554500-84554519 | None:intergenic | 10.0% |
| !!! | ATGAAATTTGAAATATTTAT+AGG | + | chr3.1:84555305-84555324 | None:intergenic | 10.0% |
| !!! | TATATATATTTTATTATGTG+AGG | - | chr3.1:84554642-84554661 | MS.gene32660:intron | 10.0% |
| !!! | TGAAATTTGAAATATTTATA+GGG | + | chr3.1:84555304-84555323 | None:intergenic | 10.0% |
| !!! | TTGTTAAAATTTAAAATTGA+GGG | + | chr3.1:84555980-84555999 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTATCAAGTTT+GGG | - | chr3.1:84554619-84554638 | MS.gene32660:intron | 10.0% |
| !!! | TTTTTTTTTTTTATCAAGTT+TGG | - | chr3.1:84554618-84554637 | MS.gene32660:intron | 10.0% |
| !! | AATAGAAATATTGAACTTAA+AGG | + | chr3.1:84556599-84556618 | None:intergenic | 15.0% |
| !! | ATGAAATAGAAATAATAGAA+TGG | + | chr3.1:84556009-84556028 | None:intergenic | 15.0% |
| !! | CAAACTAATATTATTTATTC+AGG | - | chr3.1:84557543-84557562 | MS.gene32660:intron | 15.0% |
| !! | GCAAATCATAATATAATTAT+TGG | - | chr3.1:84558592-84558611 | MS.gene32660:intron | 15.0% |
| !! | GGATATGTTAAAATATAAAA+TGG | - | chr3.1:84557183-84557202 | MS.gene32660:intron | 15.0% |
| !! | TAAAAACTAAAATATTGCAA+AGG | + | chr3.1:84559365-84559384 | None:intergenic | 15.0% |
| !! | TTATATTAAAGTTAATACAG+TGG | + | chr3.1:84557761-84557780 | None:intergenic | 15.0% |
| !! | TTGAAATTATAAAAACTGAA+TGG | + | chr3.1:84556630-84556649 | None:intergenic | 15.0% |
| !!! | AAAAAAAAATTAGCAAGTTT+TGG | - | chr3.1:84555336-84555355 | MS.gene32660:intron | 15.0% |
| !!! | ATATTTTCTTTTCTAATATG+AGG | + | chr3.1:84556178-84556197 | None:intergenic | 15.0% |
| !!! | ATTAAGTACAATTTTTTCTT+TGG | - | chr3.1:84557849-84557868 | MS.gene32660:intron | 15.0% |
| !!! | ATTTGGATATTTTATATACA+TGG | - | chr3.1:84557162-84557181 | MS.gene32660:CDS | 15.0% |
| !!! | GTTGTTAAAATTTAAAATTG+AGG | + | chr3.1:84555981-84556000 | None:intergenic | 15.0% |
| !!! | TATAACAAAATTTATTTTGG+AGG | + | chr3.1:84554497-84554516 | None:intergenic | 15.0% |
| !!! | TATGTAATTAGTATTTTCAA+TGG | + | chr3.1:84557327-84557346 | None:intergenic | 15.0% |
| !!! | TTTTGAGGTTAAATAATTTT+TGG | - | chr3.1:84555277-84555296 | MS.gene32660:intron | 15.0% |
| !! | AAATACTAATTACATATCCA+AGG | - | chr3.1:84557331-84557350 | MS.gene32660:intron | 20.0% |
| !! | AAGATCATAAATATTGTTAG+AGG | - | chr3.1:84557396-84557415 | MS.gene32660:intron | 20.0% |
| !! | ACAATAATTAATGTATTCTC+AGG | - | chr3.1:84559572-84559591 | MS.gene32660:CDS | 20.0% |
| !! | ATTACTATGAAATGAAATAG+AGG | + | chr3.1:84554237-84554256 | None:intergenic | 20.0% |
| !! | ATTTGACCAAATAAAATCAA+AGG | + | chr3.1:84556564-84556583 | None:intergenic | 20.0% |
| !! | GCAAAATTCATTACAAAAAA+TGG | - | chr3.1:84554961-84554980 | MS.gene32660:intron | 20.0% |
| !! | GTAAAAAGTTTCAACATAAA+AGG | + | chr3.1:84554466-84554485 | None:intergenic | 20.0% |
| !! | GTAACGAAAAACATATATAT+GGG | - | chr3.1:84555878-84555897 | MS.gene32660:intron | 20.0% |
| !! | GTTGTGACAAAAAATATTTA+AGG | + | chr3.1:84555363-84555382 | None:intergenic | 20.0% |
| !! | GTTTCATAATACAGTTAAAT+TGG | - | chr3.1:84554534-84554553 | MS.gene32660:intron | 20.0% |
| !! | TAAAAAATATTGGATTCACT+GGG | - | chr3.1:84556048-84556067 | MS.gene32660:CDS | 20.0% |
| !! | TAACGAAAAACATATATATG+GGG | - | chr3.1:84555879-84555898 | MS.gene32660:intron | 20.0% |
| !! | TAGAAATAATAGAATGGTAA+AGG | + | chr3.1:84556003-84556022 | None:intergenic | 20.0% |
| !! | TATTATGATTGGTATCATAT+TGG | - | chr3.1:84554108-84554127 | MS.gene32660:CDS | 20.0% |
| !! | TGCAATATGAAAATATATGT+AGG | - | chr3.1:84554699-84554718 | MS.gene32660:intron | 20.0% |
| !! | TGTATCTAGATAATTATGTT+TGG | - | chr3.1:84556928-84556947 | MS.gene32660:intron | 20.0% |
| !! | TGTGTAATAGAATAATGATT+AGG | - | chr3.1:84557249-84557268 | MS.gene32660:intron | 20.0% |
| !! | TTATGATCTTCATAAGATTA+GGG | + | chr3.1:84557386-84557405 | None:intergenic | 20.0% |
| !! | TTGATTTATAATGTTGCTAA+TGG | - | chr3.1:84556859-84556878 | MS.gene32660:intron | 20.0% |
| !! | TTTATGATCTTCATAAGATT+AGG | + | chr3.1:84557387-84557406 | None:intergenic | 20.0% |
| !!! | AATAATATCGTATTGCTTTT+CGG | + | chr3.1:84557672-84557691 | None:intergenic | 20.0% |
| !!! | AGTTTAATTTGATCAATTAC+AGG | - | chr3.1:84559389-84559408 | MS.gene32660:intron | 20.0% |
| !!! | ATATTTTTTGTCACAACTTT+TGG | - | chr3.1:84555366-84555385 | MS.gene32660:intron | 20.0% |
| !!! | ATGTTTTTCTCTAAGAAAAA+AGG | - | chr3.1:84556127-84556146 | MS.gene32660:intron | 20.0% |
| !!! | ATTATGTTTGGTGTTATAAA+CGG | - | chr3.1:84556940-84556959 | MS.gene32660:intron | 20.0% |
| !!! | ATTTTATTAACTTACGTGTT+CGG | - | chr3.1:84554292-84554311 | MS.gene32660:intron | 20.0% |
| !!! | ATTTTGTTTTAAACTAAGAC+AGG | + | chr3.1:84556828-84556847 | None:intergenic | 20.0% |
| !!! | CATATATATGTTTTTCGTTA+CGG | + | chr3.1:84555879-84555898 | None:intergenic | 20.0% |
| !!! | CATTTTTTAATTGAGTTTGA+TGG | + | chr3.1:84556728-84556747 | None:intergenic | 20.0% |
| !!! | GGTTTTTATGAATCTATTAT+AGG | - | chr3.1:84554320-84554339 | MS.gene32660:intron | 20.0% |
| !!! | GTTATTCCTTTGATTTTATT+TGG | - | chr3.1:84556555-84556574 | MS.gene32660:intron | 20.0% |
| !!! | TACAATTATTTTACTGGTTT+TGG | + | chr3.1:84558522-84558541 | None:intergenic | 20.0% |
| !!! | TCATTGTAACTTGTTTATAT+AGG | - | chr3.1:84556025-84556044 | MS.gene32660:CDS | 20.0% |
| !!! | TTACCAATAGTAGATTTTAT+GGG | - | chr3.1:84559249-84559268 | MS.gene32660:intron | 20.0% |
| !!! | TTGAGGGTTAAATAATTTTT+TGG | + | chr3.1:84555964-84555983 | None:intergenic | 20.0% |
| !!! | TTTCTTTTGTAGGAAAAAAT+GGG | - | chr3.1:84560528-84560547 | MS.gene32660:intron | 20.0% |
| !!! | TTTTCTTAGAGAAAAACATA+CGG | + | chr3.1:84556126-84556145 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTGTAGGAAAAAA+TGG | - | chr3.1:84560527-84560546 | MS.gene32660:intron | 20.0% |
| !!! | TTTTTTCCTACAAAAGAAAA+AGG | + | chr3.1:84560527-84560546 | None:intergenic | 20.0% |
| ! | AAAAAATATTGGATTCACTG+GGG | - | chr3.1:84556049-84556068 | MS.gene32660:CDS | 25.0% |
| ! | AAAAACTAAAAGGACTAATC+TGG | - | chr3.1:84557106-84557125 | MS.gene32660:intron | 25.0% |
| ! | AAAAGACAAAGAAGACAATT+TGG | + | chr3.1:84558271-84558290 | None:intergenic | 25.0% |
| ! | AAAGAAGTTATGCAAGTTAA+TGG | - | chr3.1:84560331-84560350 | MS.gene32660:CDS | 25.0% |
| ! | AATGCTATCAAGTAAACATA+AGG | + | chr3.1:84558316-84558335 | None:intergenic | 25.0% |
| ! | AGGAATTTCAATTATTGAAG+AGG | - | chr3.1:84555108-84555127 | MS.gene32660:CDS | 25.0% |
| ! | AGTAAGACTTATGATGTTAT+TGG | - | chr3.1:84559332-84559351 | MS.gene32660:intron | 25.0% |
| ! | ATAAAACTAACTTCGATGAA+TGG | - | chr3.1:84556299-84556318 | MS.gene32660:CDS | 25.0% |
| ! | ATAACATCATAAGTCTTACT+CGG | + | chr3.1:84559332-84559351 | None:intergenic | 25.0% |
| ! | ATAACTCAATATCATCATCA+CGG | - | chr3.1:84559166-84559185 | MS.gene32660:intron | 25.0% |
| ! | ATAACTTCTTTGCAAAAATG+AGG | + | chr3.1:84560322-84560341 | None:intergenic | 25.0% |
| ! | ATAGCCATTTAGAAAAGATT+TGG | - | chr3.1:84554561-84554580 | MS.gene32660:intron | 25.0% |
| ! | ATATGTTGCTCAAAATGTAT+AGG | - | chr3.1:84555088-84555107 | MS.gene32660:CDS | 25.0% |
| ! | ATGATCATTGGTATTATGAT+TGG | - | chr3.1:84554097-84554116 | MS.gene32660:CDS | 25.0% |
| ! | ATTATAGAAATAAACCCACT+TGG | + | chr3.1:84555716-84555735 | None:intergenic | 25.0% |
| ! | ATTTGGTCAAATGTATTATG+AGG | - | chr3.1:84556572-84556591 | MS.gene32660:intron | 25.0% |
| ! | CACAAAGATAACAAATATAG+GGG | - | chr3.1:84558829-84558848 | MS.gene32660:intron | 25.0% |
| ! | CATGTGATTATGATTGAATT+GGG | - | chr3.1:84556888-84556907 | MS.gene32660:intron | 25.0% |
| ! | CCACAAAGATAACAAATATA+GGG | - | chr3.1:84558828-84558847 | MS.gene32660:intron | 25.0% |
| ! | CGTAACGAAAAACATATATA+TGG | - | chr3.1:84555877-84555896 | MS.gene32660:intron | 25.0% |
| ! | GTAAAAAATATTGGATTCAC+TGG | - | chr3.1:84556047-84556066 | MS.gene32660:CDS | 25.0% |
| ! | GTAAGACTTATGATGTTATT+GGG | - | chr3.1:84559333-84559352 | MS.gene32660:intron | 25.0% |
| ! | GTTTATGTGAATTGTTAAGT+TGG | - | chr3.1:84556747-84556766 | MS.gene32660:intron | 25.0% |
| ! | TAAATTACCTCATTGACAAA+TGG | + | chr3.1:84554587-84554606 | None:intergenic | 25.0% |
| ! | TAAGACTTATGATGTTATTG+GGG | - | chr3.1:84559334-84559353 | MS.gene32660:intron | 25.0% |
| ! | TAATTTAAAAATATGGAGGG+TGG | + | chr3.1:84555417-84555436 | None:intergenic | 25.0% |
| ! | TAGATGCAAATTAATCTTTC+CGG | + | chr3.1:84560631-84560650 | None:intergenic | 25.0% |
| ! | TCAAATTTCACAAATCTAAC+CGG | + | chr3.1:84554842-84554861 | None:intergenic | 25.0% |
| ! | TCATGTGATTATGATTGAAT+TGG | - | chr3.1:84556887-84556906 | MS.gene32660:intron | 25.0% |
| ! | TCCACAAAGATAACAAATAT+AGG | - | chr3.1:84558827-84558846 | MS.gene32660:intron | 25.0% |
| ! | TTATAGAAATAAACCCACTT+GGG | + | chr3.1:84555715-84555734 | None:intergenic | 25.0% |
| ! | TTATATTATAACTAGCCAAC+TGG | + | chr3.1:84556346-84556365 | None:intergenic | 25.0% |
| ! | TTCATCATCAAAGATTCTTA+TGG | + | chr3.1:84558701-84558720 | None:intergenic | 25.0% |
| !! | ATACGACGAAACATTTATTT+TGG | - | chr3.1:84560593-84560612 | MS.gene32660:CDS | 25.0% |
| !! | CTTACCAATAGTAGATTTTA+TGG | - | chr3.1:84559248-84559267 | MS.gene32660:intron | 25.0% |
| !! | GCATGATTTTTATGACTTAA+AGG | + | chr3.1:84556689-84556708 | None:intergenic | 25.0% |
| !! | TACATGGTATTTTCATGAAT+CGG | - | chr3.1:84560479-84560498 | MS.gene32660:intron | 25.0% |
| !! | TATTTTATTATGTGAGGCTA+TGG | - | chr3.1:84554648-84554667 | MS.gene32660:intron | 25.0% |
| !! | TCAAATTAGTTCTTTATGTC+AGG | - | chr3.1:84556646-84556665 | MS.gene32660:intron | 25.0% |
| !! | TCTAAATTTTCAGCAAGTTT+TGG | + | chr3.1:84555906-84555925 | None:intergenic | 25.0% |
| !! | TGTTTTCCTTTTTCTTTTGT+AGG | - | chr3.1:84560518-84560537 | MS.gene32660:intron | 25.0% |
| !! | TTTTAGCATAAATGGAACAA+GGG | + | chr3.1:84559964-84559983 | None:intergenic | 25.0% |
| !! | TTTTATTAACTTACGTGTTC+GGG | - | chr3.1:84554293-84554312 | MS.gene32660:intron | 25.0% |
| !! | TTTTTATACCTATAATCTCC+TGG | + | chr3.1:84557634-84557653 | None:intergenic | 25.0% |
| !!! | AAAACTTGCTGAAAATTTAG+AGG | - | chr3.1:84555905-84555924 | MS.gene32660:intron | 25.0% |
| !!! | AAACTTGCTGAAAATTTAGA+GGG | - | chr3.1:84555906-84555925 | MS.gene32660:intron | 25.0% |
| !!! | AATACCAACTTTGGTTTTAA+TGG | + | chr3.1:84555203-84555222 | None:intergenic | 25.0% |
| !!! | ACAAGAAGTATCATAGAAAA+TGG | + | chr3.1:84554268-84554287 | None:intergenic | 25.0% |
| !!! | ATAAGAATCTTTGATGATGA+AGG | - | chr3.1:84558700-84558719 | MS.gene32660:intron | 25.0% |
| !!! | ATATTCATCTTGGTTTTACA+TGG | - | chr3.1:84560463-84560482 | MS.gene32660:intron | 25.0% |
| !!! | ATGAACAATAGTTTTGAAAG+CGG | + | chr3.1:84556787-84556806 | None:intergenic | 25.0% |
| !!! | GAAAGATTAATTTGCATCTA+AGG | - | chr3.1:84560631-84560650 | MS.gene32660:CDS | 25.0% |
| !!! | GTATGTATTTAGTATTGACT+CGG | + | chr3.1:84559776-84559795 | None:intergenic | 25.0% |
| !!! | GTTTTTAGTCATTGCTTTTA+AGG | + | chr3.1:84555857-84555876 | None:intergenic | 25.0% |
| !!! | TACATATCCAAGGTTTTATA+GGG | - | chr3.1:84557341-84557360 | MS.gene32660:intron | 25.0% |
| !!! | TATGTATTTAGTATTGACTC+GGG | + | chr3.1:84559775-84559794 | None:intergenic | 25.0% |
| !!! | TTACATATCCAAGGTTTTAT+AGG | - | chr3.1:84557340-84557359 | MS.gene32660:intron | 25.0% |
| !!! | TTTCTGATTTTTTCAATGCA+AGG | + | chr3.1:84559296-84559315 | None:intergenic | 25.0% |
| AAAGGATTTCATGATGCATT+TGG | - | chr3.1:84557145-84557164 | MS.gene32660:CDS | 30.0% | |
| AAAGTCATACCAATTATACC+AGG | - | chr3.1:84557613-84557632 | MS.gene32660:intron | 30.0% | |
| AACCAATTCTTGAACAGTAT+AGG | - | chr3.1:84554752-84554771 | MS.gene32660:intron | 30.0% | |
| AAGTACATAAGTTTCTCGTA+TGG | - | chr3.1:84557471-84557490 | MS.gene32660:intron | 30.0% | |
| ACATGCTAATTGTTGAACTA+TGG | - | chr3.1:84559664-84559683 | MS.gene32660:intron | 30.0% | |
| AGGAACCTTAAAAGTTTGAT+TGG | - | chr3.1:84557716-84557735 | MS.gene32660:intron | 30.0% | |
| ATGAAACTCTAAATCCAGTA+TGG | - | chr3.1:84559601-84559620 | MS.gene32660:CDS | 30.0% | |
| ATGAGCTATGTTTCTTATGA+TGG | - | chr3.1:84560173-84560192 | MS.gene32660:CDS | 30.0% | |
| CAACAAAGTTAGAGGAAAAA+AGG | - | chr3.1:84557010-84557029 | MS.gene32660:intron | 30.0% | |
| CAATTATACCAGGAGATTAT+AGG | - | chr3.1:84557623-84557642 | MS.gene32660:intron | 30.0% | |
| CAATTATTGAAGAGGATAGT+GGG | - | chr3.1:84555116-84555135 | MS.gene32660:CDS | 30.0% | |
| CATGCTAATTGTTGAACTAT+GGG | - | chr3.1:84559665-84559684 | MS.gene32660:intron | 30.0% | |
| CCAAGATGAATATGATAAAG+TGG | + | chr3.1:84560456-84560475 | None:intergenic | 30.0% | |
| CCACTTTATCATATTCATCT+TGG | - | chr3.1:84560453-84560472 | MS.gene32660:intron | 30.0% | |
| CTATAATCTCCTGGTATAAT+TGG | + | chr3.1:84557625-84557644 | None:intergenic | 30.0% | |
| CTATGAAATGAAATAGAGGA+AGG | + | chr3.1:84554233-84554252 | None:intergenic | 30.0% | |
| GAACCTTAAAAGTTTGATTG+GGG | - | chr3.1:84557718-84557737 | MS.gene32660:intron | 30.0% | |
| GGAACCTTAAAAGTTTGATT+GGG | - | chr3.1:84557717-84557736 | MS.gene32660:intron | 30.0% | |
| GTTAATACAGTGGTTATCAT+TGG | + | chr3.1:84557751-84557770 | None:intergenic | 30.0% | |
| TAACATCATAAGTCTTACTC+GGG | + | chr3.1:84559331-84559350 | None:intergenic | 30.0% | |
| TAAGGATGTATGGTTGAAAT+TGG | - | chr3.1:84558789-84558808 | MS.gene32660:intron | 30.0% | |
| TAAGTGACCATTTAACATTG+AGG | + | chr3.1:84556981-84557000 | None:intergenic | 30.0% | |
| TAATGTTCTTTGTCTTCTCA+CGG | - | chr3.1:84558923-84558942 | MS.gene32660:intron | 30.0% | |
| TATCACTATTCACTAGTGAA+AGG | - | chr3.1:84557981-84558000 | MS.gene32660:intron | 30.0% | |
| TCAAATGTTTGATTCCATAC+TGG | + | chr3.1:84559618-84559637 | None:intergenic | 30.0% | |
| TCAATTATTGAAGAGGATAG+TGG | - | chr3.1:84555115-84555134 | MS.gene32660:CDS | 30.0% | |
| TCTTCATAAGATTAGGGAAA+AGG | + | chr3.1:84557380-84557399 | None:intergenic | 30.0% | |
| TGTTTCTTTATCATTGTGTG+TGG | - | chr3.1:84558567-84558586 | MS.gene32660:intron | 30.0% | |
| TTAATGGCAAGAACAATATC+CGG | + | chr3.1:84555187-84555206 | None:intergenic | 30.0% | |
| TTCAAGTAGACAAGTTTAAG+AGG | + | chr3.1:84559717-84559736 | None:intergenic | 30.0% | |
| TTCTTGCTAAGTTATGTTGT+AGG | - | chr3.1:84557696-84557715 | MS.gene32660:intron | 30.0% | |
| TTGATTGTTATCTTGGTTGT+TGG | - | chr3.1:84558157-84558176 | MS.gene32660:intron | 30.0% | |
| TTGCCCATAAAATCTACTAT+TGG | + | chr3.1:84559255-84559274 | None:intergenic | 30.0% | |
| TTTATTAACTTACGTGTTCG+GGG | - | chr3.1:84554294-84554313 | MS.gene32660:intron | 30.0% | |
| ! | AATAGTAGATTTTATGGGCA+AGG | - | chr3.1:84559254-84559273 | MS.gene32660:intron | 30.0% |
| ! | AATTGAGTTTGATGGTAAGA+GGG | + | chr3.1:84556720-84556739 | None:intergenic | 30.0% |
| ! | ACATTTTCAACCTTTACACT+CGG | - | chr3.1:84554796-84554815 | MS.gene32660:intron | 30.0% |
| ! | ATCTTGTTATCAACCAACAT+AGG | - | chr3.1:84559014-84559033 | MS.gene32660:intron | 30.0% |
| ! | ATGGCCAAATCTTTTCTAAA+TGG | + | chr3.1:84554568-84554587 | None:intergenic | 30.0% |
| ! | ATTTTGGATGATGCTAAATC+CGG | - | chr3.1:84560609-84560628 | MS.gene32660:CDS | 30.0% |
| ! | GATTTTACTCTTAAGGTTGT+TGG | - | chr3.1:84556458-84556477 | MS.gene32660:intron | 30.0% |
| ! | GCATTTCCCAATTTTCTTTA+TGG | - | chr3.1:84557893-84557912 | MS.gene32660:intron | 30.0% |
| ! | TAATTGAGTTTGATGGTAAG+AGG | + | chr3.1:84556721-84556740 | None:intergenic | 30.0% |
| ! | TCCAAATTTTTATCCGTCAT+GGG | - | chr3.1:84554401-84554420 | MS.gene32660:intron | 30.0% |
| ! | TCCCAATTTTCTTTATGGTT+GGG | - | chr3.1:84557898-84557917 | MS.gene32660:intron | 30.0% |
| ! | TTAGGCGTAGATAAGTTTTA+TGG | - | chr3.1:84557267-84557286 | MS.gene32660:intron | 30.0% |
| ! | TTCCCAATTTTCTTTATGGT+TGG | - | chr3.1:84557897-84557916 | MS.gene32660:intron | 30.0% |
| ! | TTTTACATCTAGTGTTCCAA+CGG | + | chr3.1:84558408-84558427 | None:intergenic | 30.0% |
| !! | AGATTAATTTGCATCTAAGG+TGG | - | chr3.1:84560634-84560653 | MS.gene32660:CDS | 30.0% |
| !! | ATGTGAATTGTTAAGTTGGT+TGG | - | chr3.1:84556751-84556770 | MS.gene32660:intron | 30.0% |
| !! | CCCTATATTTGTTATCTTTG+TGG | + | chr3.1:84558831-84558850 | None:intergenic | 30.0% |
| !! | GACTCAAAGCATTAATTTTG+AGG | - | chr3.1:84555262-84555281 | MS.gene32660:intron | 30.0% |
| !! | GGGACTTACAATTATTTTAC+TGG | + | chr3.1:84558528-84558547 | None:intergenic | 30.0% |
| !! | GTTTTAGCATAAATGGAACA+AGG | + | chr3.1:84559965-84559984 | None:intergenic | 30.0% |
| !! | TATGTTGGTTGATAACAAGA+TGG | + | chr3.1:84559015-84559034 | None:intergenic | 30.0% |
| !!! | AGCTTTGGATTTTACTCTTA+AGG | - | chr3.1:84556451-84556470 | MS.gene32660:intron | 30.0% |
| AAAAGCAACGTGATTGTAAG+AGG | - | chr3.1:84559192-84559211 | MS.gene32660:intron | 35.0% | |
| AAGTGTTCTCAACTCCATAT+GGG | + | chr3.1:84559062-84559081 | None:intergenic | 35.0% | |
| ACTAGATGTAAAACTAGTGC+AGG | - | chr3.1:84558415-84558434 | MS.gene32660:intron | 35.0% | |
| ACTTGAACCTGGTAAAGTTA+AGG | - | chr3.1:84558771-84558790 | MS.gene32660:intron | 35.0% | |
| AGATAACAAATATAGGGGTG+AGG | - | chr3.1:84558834-84558853 | MS.gene32660:intron | 35.0% | |
| AGCCCAACCATAAAGAAAAT+TGG | + | chr3.1:84557903-84557922 | None:intergenic | 35.0% | |
| AGGTAGTACAATACCAACTT+TGG | + | chr3.1:84555212-84555231 | None:intergenic | 35.0% | |
| ATAATGCAGAAGATTCCAGT+TGG | - | chr3.1:84556328-84556347 | MS.gene32660:CDS | 35.0% | |
| ATACTCGTTGTGATTGTCAT+TGG | - | chr3.1:84554933-84554952 | MS.gene32660:intron | 35.0% | |
| ATTCACGTTAGTCATAACCT+AGG | - | chr3.1:84555028-84555047 | MS.gene32660:intron | 35.0% | |
| ATTGGTATGACTTTACGTAC+TGG | + | chr3.1:84557607-84557626 | None:intergenic | 35.0% | |
| CAAATCTAACCGGTAAATTG+TGG | + | chr3.1:84554832-84554851 | None:intergenic | 35.0% | |
| CATACATCCTTAACTTTACC+AGG | + | chr3.1:84558781-84558800 | None:intergenic | 35.0% | |
| CGTACAAATACCATAGCAAA+AGG | + | chr3.1:84558482-84558501 | None:intergenic | 35.0% | |
| CTGGTAAAGTTAAGGATGTA+TGG | - | chr3.1:84558779-84558798 | MS.gene32660:intron | 35.0% | |
| CTTGCCATTAAAACCAAAGT+TGG | - | chr3.1:84555196-84555215 | MS.gene32660:intron | 35.0% | |
| GATTGTAAGAGGAGTTCTAT+CGG | - | chr3.1:84559203-84559222 | MS.gene32660:intron | 35.0% | |
| GCCCAACCATAAAGAAAATT+GGG | + | chr3.1:84557902-84557921 | None:intergenic | 35.0% | |
| GGTAACTCACAAATACTTGA+TGG | - | chr3.1:84555237-84555256 | MS.gene32660:intron | 35.0% | |
| GTGAATAGTGATAACACTTG+AGG | + | chr3.1:84557974-84557993 | None:intergenic | 35.0% | |
| GTGATATTTCAACCTTACCA+GGG | - | chr3.1:84556483-84556502 | MS.gene32660:intron | 35.0% | |
| TAAAAGTTTGATTGGGGATG+TGG | - | chr3.1:84557724-84557743 | MS.gene32660:intron | 35.0% | |
| TAACCAAGGTCATATTGGAA+GGG | - | chr3.1:84560568-84560587 | MS.gene32660:intron | 35.0% | |
| TAATGGCAAGAACAATATCC+GGG | + | chr3.1:84555186-84555205 | None:intergenic | 35.0% | |
| TATGATAAAGTGGTCACTTG+AGG | + | chr3.1:84560446-84560465 | None:intergenic | 35.0% | |
| TCAATGCAAGGACAACAAAT+GGG | + | chr3.1:84559284-84559303 | None:intergenic | 35.0% | |
| TGATATTTCAACCTTACCAG+GGG | - | chr3.1:84556484-84556503 | MS.gene32660:intron | 35.0% | |
| TTAATTCCAACCACGAAGAT+GGG | + | chr3.1:84557951-84557970 | None:intergenic | 35.0% | |
| TTCAATGCAAGGACAACAAA+TGG | + | chr3.1:84559285-84559304 | None:intergenic | 35.0% | |
| TTTACATCTAGTGTTCCAAC+GGG | + | chr3.1:84558407-84558426 | None:intergenic | 35.0% | |
| TTTACTCTTAAGGTTGTTGG+TGG | - | chr3.1:84556461-84556480 | MS.gene32660:intron | 35.0% | |
| ! | AAAGTGTTCTCAACTCCATA+TGG | + | chr3.1:84559063-84559082 | None:intergenic | 35.0% |
| ! | AAATTTTTATCCGTCATGGG+TGG | - | chr3.1:84554404-84554423 | MS.gene32660:intron | 35.0% |
| ! | AAGTTCCTTTAGGGAAACTT+GGG | + | chr3.1:84558755-84558774 | None:intergenic | 35.0% |
| ! | ATTGAGTTTGATGGTAAGAG+GGG | + | chr3.1:84556719-84556738 | None:intergenic | 35.0% |
| ! | CAAAGTGCTCATTCCATATT+GGG | + | chr3.1:84558642-84558661 | None:intergenic | 35.0% |
| ! | CAGAGAGTTGATTGTTATCT+TGG | - | chr3.1:84558150-84558169 | MS.gene32660:intron | 35.0% |
| ! | CATCCCCAATCAAACTTTTA+AGG | + | chr3.1:84557724-84557743 | None:intergenic | 35.0% |
| ! | CTCCAAATTTTTATCCGTCA+TGG | - | chr3.1:84554400-84554419 | MS.gene32660:intron | 35.0% |
| ! | GAAATCTGATCCTTTTGCTA+TGG | - | chr3.1:84558469-84558488 | MS.gene32660:intron | 35.0% |
| ! | GATACTCAAAAAAGAGCGTA+AGG | - | chr3.1:84557418-84557437 | MS.gene32660:intron | 35.0% |
| ! | GCACTTTTCAACAAAGTTAG+AGG | - | chr3.1:84557002-84557021 | MS.gene32660:intron | 35.0% |
| ! | TCAAACATTTGACTTCGTTG+TGG | - | chr3.1:84559626-84559645 | MS.gene32660:CDS | 35.0% |
| ! | TCAAAGTGCTCATTCCATAT+TGG | + | chr3.1:84558643-84558662 | None:intergenic | 35.0% |
| !! | ACCCATGACGGATAAAAATT+TGG | + | chr3.1:84554405-84554424 | None:intergenic | 35.0% |
| !! | CATGACGGATAAAAATTTGG+AGG | + | chr3.1:84554402-84554421 | None:intergenic | 35.0% |
| !! | GATGGAGGTTTTAGCATAAA+TGG | + | chr3.1:84559972-84559991 | None:intergenic | 35.0% |
| !!! | AGTTTTGAAAGCGGTGAATT+TGG | + | chr3.1:84556778-84556797 | None:intergenic | 35.0% |
| !!! | TACTGGTTTTGGTTTTGTCA+CGG | + | chr3.1:84558511-84558530 | None:intergenic | 35.0% |
| AAAAACATCACCACCCTTAC+TGG | + | chr3.1:84559906-84559925 | None:intergenic | 40.0% | |
| AAACTCCATTGTCACTCCAT+TGG | + | chr3.1:84555143-84555162 | None:intergenic | 40.0% | |
| AACCAAGGTCATATTGGAAG+GGG | - | chr3.1:84560569-84560588 | MS.gene32660:intron | 40.0% | |
| AACCTAGAATTGAAACCCGT+TGG | - | chr3.1:84558389-84558408 | MS.gene32660:intron | 40.0% | |
| AACTCCATTGTCACTCCATT+GGG | + | chr3.1:84555142-84555161 | None:intergenic | 40.0% | |
| AATGGAGTTTGACATGCAGT+GGG | - | chr3.1:84555153-84555172 | MS.gene32660:intron | 40.0% | |
| AATTGCTGAGCGGTTTGAAA+AGG | + | chr3.1:84559995-84560014 | None:intergenic | 40.0% | |
| ACAACCAGTTGAACCCAATA+TGG | - | chr3.1:84558626-84558645 | MS.gene32660:CDS | 40.0% | |
| ACGTGGTTAGTGAGTAATCA+CGG | + | chr3.1:84559101-84559120 | None:intergenic | 40.0% | |
| ACTCAATATCATCATCACGG+AGG | - | chr3.1:84559169-84559188 | MS.gene32660:intron | 40.0% | |
| AGAAATAAACCCACTTGGGT+TGG | + | chr3.1:84555711-84555730 | None:intergenic | 40.0% | |
| AGACAATAGCAAAGTTTGCG+AGG | - | chr3.1:84554346-84554365 | MS.gene32660:intron | 40.0% | |
| AGATAACACCCTTAGTGTAG+GGG | + | chr3.1:84560111-84560130 | None:intergenic | 40.0% | |
| AGTGAGTAATCACGGACAAA+AGG | + | chr3.1:84559093-84559112 | None:intergenic | 40.0% | |
| AGTGATCATGACACTAACCA+AGG | - | chr3.1:84560554-84560573 | MS.gene32660:intron | 40.0% | |
| AGTGTAGCTCCACAATTTAC+CGG | - | chr3.1:84554820-84554839 | MS.gene32660:intron | 40.0% | |
| ATCACTAGCTCCATTCTTCA+GGG | + | chr3.1:84559133-84559152 | None:intergenic | 40.0% | |
| ATTCAAGCAGCTGAGCTTAT+TGG | - | chr3.1:84558724-84558743 | MS.gene32660:intron | 40.0% | |
| ATTGCTGAGCGGTTTGAAAA+GGG | + | chr3.1:84559994-84560013 | None:intergenic | 40.0% | |
| CAAGTTCACTTTGTTCACCT+AGG | + | chr3.1:84555048-84555067 | None:intergenic | 40.0% | |
| CACGAAGATGGGTAAGTTAA+AGG | + | chr3.1:84557940-84557959 | None:intergenic | 40.0% | |
| CATTCCATATTGGGTTCAAC+TGG | + | chr3.1:84558633-84558652 | None:intergenic | 40.0% | |
| CCAAGTTATAGAGTCTTCGA+TGG | + | chr3.1:84557584-84557603 | None:intergenic | 40.0% | |
| CCATCGAAGACTCTATAACT+TGG | - | chr3.1:84557581-84557600 | MS.gene32660:intron | 40.0% | |
| CCATTTAACATTGAGGTGGA+AGG | + | chr3.1:84556974-84556993 | None:intergenic | 40.0% | |
| CCTTCCACCTCAATGTTAAA+TGG | - | chr3.1:84556971-84556990 | MS.gene32660:intron | 40.0% | |
| CTAACCAAGGTCATATTGGA+AGG | - | chr3.1:84560567-84560586 | MS.gene32660:intron | 40.0% | |
| GACACTAACCAAGGTCATAT+TGG | - | chr3.1:84560563-84560582 | MS.gene32660:intron | 40.0% | |
| GAGATAACACCCTTAGTGTA+GGG | + | chr3.1:84560112-84560131 | None:intergenic | 40.0% | |
| GAGCTATTGTATTGCCCATA+TGG | - | chr3.1:84559045-84559064 | MS.gene32660:intron | 40.0% | |
| GATATCAGGTAATTGCTGAG+CGG | + | chr3.1:84560005-84560024 | None:intergenic | 40.0% | |
| GATTTGGCCATTTGTCAATG+AGG | - | chr3.1:84554577-84554596 | MS.gene32660:intron | 40.0% | |
| GCTAAATAGCCCACCTAAAT+TGG | - | chr3.1:84555615-84555634 | MS.gene32660:CDS | 40.0% | |
| GGCCTATACTGTTCAAGAAT+TGG | + | chr3.1:84554757-84554776 | None:intergenic | 40.0% | |
| GGTACAAGCGTTAAACTGAA+AGG | - | chr3.1:84557127-84557146 | MS.gene32660:CDS | 40.0% | |
| GGTGAACAAAGTGAACTTGA+AGG | - | chr3.1:84555049-84555068 | MS.gene32660:intron | 40.0% | |
| GGTGATATTTCAACCTTACC+AGG | - | chr3.1:84556482-84556501 | MS.gene32660:intron | 40.0% | |
| GTGACCATTTAACATTGAGG+TGG | + | chr3.1:84556978-84556997 | None:intergenic | 40.0% | |
| GTGAGTAATCACGGACAAAA+GGG | + | chr3.1:84559092-84559111 | None:intergenic | 40.0% | |
| GTTAATTCCAACCACGAAGA+TGG | + | chr3.1:84557952-84557971 | None:intergenic | 40.0% | |
| GTTCTACGAACAGAAAGCTT+TGG | - | chr3.1:84556436-84556455 | MS.gene32660:intron | 40.0% | |
| TATCTCCTTGGATATCACGA+GGG | - | chr3.1:84560126-84560145 | MS.gene32660:intron | 40.0% | |
| TATTTGTGAGTTACCTGCAC+AGG | + | chr3.1:84555232-84555251 | None:intergenic | 40.0% | |
| TCATACCTCCGTCCTAAATA+AGG | + | chr3.1:84560157-84560176 | None:intergenic | 40.0% | |
| TCATTTCTTTCCCCCAAGTA+TGG | - | chr3.1:84559878-84559897 | MS.gene32660:intron | 40.0% | |
| TGAGTAAATACCACCCATGA+CGG | + | chr3.1:84554417-84554436 | None:intergenic | 40.0% | |
| TTATCTCCTTGGATATCACG+AGG | - | chr3.1:84560125-84560144 | MS.gene32660:intron | 40.0% | |
| TTTGAGAAGACCCTGAAGAA+TGG | - | chr3.1:84559120-84559139 | MS.gene32660:intron | 40.0% | |
| ! | AACATTTGACTTCGTTGTGG+AGG | - | chr3.1:84559629-84559648 | MS.gene32660:CDS | 40.0% |
| ! | ACCAGGTTCAAGTTCCTTTA+GGG | + | chr3.1:84558764-84558783 | None:intergenic | 40.0% |
| ! | CAAGTTCCTTTAGGGAAACT+TGG | + | chr3.1:84558756-84558775 | None:intergenic | 40.0% |
| ! | CTTTAACTTACCCATCTTCG+TGG | - | chr3.1:84557938-84557957 | MS.gene32660:intron | 40.0% |
| ! | TACCAGGTTCAAGTTCCTTT+AGG | + | chr3.1:84558765-84558784 | None:intergenic | 40.0% |
| ! | TTCCAACGGGTTTCAATTCT+AGG | + | chr3.1:84558394-84558413 | None:intergenic | 40.0% |
| !! | AAGAGGTGTTACCTTTCCAA+AGG | + | chr3.1:84559700-84559719 | None:intergenic | 40.0% |
| !! | AGAAGCACCCTATAAAACCT+TGG | + | chr3.1:84557351-84557370 | None:intergenic | 40.0% |
| !!! | TTTTGGTTTTGTCACGGAGT+GGG | + | chr3.1:84558505-84558524 | None:intergenic | 40.0% |
| AAACATACGGCTCCAAAAGC+AGG | + | chr3.1:84556113-84556132 | None:intergenic | 45.0% | |
| AAAGTGGTCACTTGAGGAGA+GGG | + | chr3.1:84560440-84560459 | None:intergenic | 45.0% | |
| AAAGTTTGCGAGGATGACAG+TGG | - | chr3.1:84554356-84554375 | MS.gene32660:intron | 45.0% | |
| AACATACGGCTCCAAAAGCA+GGG | + | chr3.1:84556112-84556131 | None:intergenic | 45.0% | |
| AACTTACCCATCTTCGTGGT+TGG | - | chr3.1:84557942-84557961 | MS.gene32660:intron | 45.0% | |
| AAGTATGGTTCCAGTAAGGG+TGG | - | chr3.1:84559893-84559912 | MS.gene32660:intron | 45.0% | |
| ACCCTTACTGGAACCATACT+TGG | + | chr3.1:84559894-84559913 | None:intergenic | 45.0% | |
| AGCGAGCTAGCTATCTCTTA+AGG | - | chr3.1:84560056-84560075 | MS.gene32660:intron | 45.0% | |
| AGCTACACTACCGAGTGTAA+AGG | + | chr3.1:84554809-84554828 | None:intergenic | 45.0% | |
| AGGTGGGAAGTTAGGATATC+AGG | + | chr3.1:84560019-84560038 | None:intergenic | 45.0% | |
| ATAGCTAGCTCGCTAAAGAG+TGG | + | chr3.1:84560050-84560069 | None:intergenic | 45.0% | |
| CAATGGAGTTTGACATGCAG+TGG | - | chr3.1:84555152-84555171 | MS.gene32660:CDS | 45.0% | |
| CATCACTAGCTCCATTCTTC+AGG | + | chr3.1:84559134-84559153 | None:intergenic | 45.0% | |
| CCCAAGTATGGTTCCAGTAA+GGG | - | chr3.1:84559890-84559909 | MS.gene32660:intron | 45.0% | |
| CCCTTACTGGAACCATACTT+GGG | + | chr3.1:84559893-84559912 | None:intergenic | 45.0% | |
| CCTTACTGGAACCATACTTG+GGG | + | chr3.1:84559892-84559911 | None:intergenic | 45.0% | |
| CTATGGGATCATGACACCTT+TGG | - | chr3.1:84559681-84559700 | MS.gene32660:intron | 45.0% | |
| CTCGCTAAAGAGTGGTTAGA+GGG | + | chr3.1:84560042-84560061 | None:intergenic | 45.0% | |
| CTGAAGAATGGAGCTAGTGA+TGG | - | chr3.1:84559132-84559151 | MS.gene32660:intron | 45.0% | |
| CTTACTGGAACCATACTTGG+GGG | + | chr3.1:84559891-84559910 | None:intergenic | 45.0% | |
| GACTCCACAACACAAGTATC+GGG | - | chr3.1:84560656-84560675 | MS.gene32660:CDS | 45.0% | |
| GCGAGCTAGCTATCTCTTAA+GGG | - | chr3.1:84560057-84560076 | MS.gene32660:intron | 45.0% | |
| GGACTCCACAACACAAGTAT+CGG | - | chr3.1:84560655-84560674 | MS.gene32660:CDS | 45.0% | |
| GGAGATAACACCCTTAGTGT+AGG | + | chr3.1:84560113-84560132 | None:intergenic | 45.0% | |
| GGCGAGTAAAAGGACATGAA+AGG | + | chr3.1:84560090-84560109 | None:intergenic | 45.0% | |
| GTGAGAGAAGACAAAACCAC+TGG | + | chr3.1:84554778-84554797 | None:intergenic | 45.0% | |
| TAAAGTGGTCACTTGAGGAG+AGG | + | chr3.1:84560441-84560460 | None:intergenic | 45.0% | |
| TATGTAGGCAGCGACAGAAT+TGG | - | chr3.1:84554714-84554733 | MS.gene32660:intron | 45.0% | |
| TCAACCAACATAGGTGCACT+TGG | - | chr3.1:84559023-84559042 | MS.gene32660:intron | 45.0% | |
| TCAATAGCTTCAGATACCCC+TGG | + | chr3.1:84556503-84556522 | None:intergenic | 45.0% | |
| TCCCTAAAGGAACTTGAACC+TGG | - | chr3.1:84558760-84558779 | MS.gene32660:intron | 45.0% | |
| TCTTGAACAGTATAGGCCAG+TGG | - | chr3.1:84554759-84554778 | MS.gene32660:intron | 45.0% | |
| TGGTATTGTACTACCTGTGC+AGG | - | chr3.1:84555216-84555235 | MS.gene32660:intron | 45.0% | |
| TTAGTGTAGGGGCGAGTAAA+AGG | + | chr3.1:84560100-84560119 | None:intergenic | 45.0% | |
| TTCATCAGCGGCATGATCAT+TGG | - | chr3.1:84554085-84554104 | MS.gene32660:CDS | 45.0% | |
| TTCCCCTTCCAATATGACCT+TGG | + | chr3.1:84560574-84560593 | None:intergenic | 45.0% | |
| TTGTGCCCAAGTTTCCCTAA+AGG | - | chr3.1:84558747-84558766 | MS.gene32660:intron | 45.0% | |
| TTTACTCGCCCCTACACTAA+GGG | - | chr3.1:84560100-84560119 | MS.gene32660:intron | 45.0% | |
| ! | ATTCTCTCCGGTGCCAATTT+AGG | + | chr3.1:84555631-84555650 | None:intergenic | 45.0% |
| ! | CACTTCCTTATTTAGGACGG+AGG | - | chr3.1:84560149-84560168 | MS.gene32660:intron | 45.0% |
| ! | GGATCATGACACCTTTGGAA+AGG | - | chr3.1:84559686-84559705 | MS.gene32660:intron | 45.0% |
| ! | GGGCACTTCCTTATTTAGGA+CGG | - | chr3.1:84560146-84560165 | MS.gene32660:intron | 45.0% |
| ! | GTAGCTGAATTCCCTGCTTT+TGG | - | chr3.1:84556098-84556117 | MS.gene32660:CDS | 45.0% |
| ! | TTGGATTCACTGGGGTTTTC+AGG | - | chr3.1:84556057-84556076 | MS.gene32660:CDS | 45.0% |
| ! | TTTGACTTCGTTGTGGAGGA+TGG | - | chr3.1:84559633-84559652 | MS.gene32660:CDS | 45.0% |
| ! | TTTGATGGTAAGAGGGGCAA+TGG | + | chr3.1:84556713-84556732 | None:intergenic | 45.0% |
| ! | TTTTACTCGCCCCTACACTA+AGG | - | chr3.1:84560099-84560118 | MS.gene32660:intron | 45.0% |
| !! | ACGAGGGCACTTCCTTATTT+AGG | - | chr3.1:84560142-84560161 | MS.gene32660:intron | 45.0% |
| !! | AGGGGTATCTGAAGCTATTG+AGG | - | chr3.1:84556502-84556521 | MS.gene32660:intron | 45.0% |
| !! | CACTAAGGGTGTTATCTCCT+TGG | - | chr3.1:84560114-84560133 | MS.gene32660:intron | 45.0% |
| !!! | GTTTTGGTTTTGTCACGGAG+TGG | + | chr3.1:84558506-84558525 | None:intergenic | 45.0% |
| !! | AACAATATAAATAAATAAAA+TGG | + | chr3.1:84560230-84560249 | None:intergenic | 5.0% |
| !! | CAAATAAATAAATAATAAAT+AGG | + | chr3.1:84558549-84558568 | None:intergenic | 5.0% |
| !!! | ATTATTATTTTTATTAGTTT+GGG | - | chr3.1:84558087-84558106 | MS.gene32660:intron | 5.0% |
| !!! | TATTATTATTTTTATTAGTT+TGG | - | chr3.1:84558086-84558105 | MS.gene32660:intron | 5.0% |
| !!! | TTTTGAATATTATTTTTTTT+CGG | - | chr3.1:84558245-84558264 | MS.gene32660:CDS | 5.0% |
| AAAGAGTGGTTAGAGGGAGG+TGG | + | chr3.1:84560036-84560055 | None:intergenic | 50.0% | |
| AAGAGTGGTTAGAGGGAGGT+GGG | + | chr3.1:84560035-84560054 | None:intergenic | 50.0% | |
| AAGTGCCCTCGTGATATCCA+AGG | + | chr3.1:84560134-84560153 | None:intergenic | 50.0% | |
| AAGTGGTCACTTGAGGAGAG+GGG | + | chr3.1:84560439-84560458 | None:intergenic | 50.0% | |
| AGCGGTTTGAAAAGGGATGG+AGG | + | chr3.1:84559987-84560006 | None:intergenic | 50.0% | |
| AGCTCCAAGTGCACCTATGT+TGG | + | chr3.1:84559030-84559049 | None:intergenic | 50.0% | |
| AGCTTCAGATACCCCTGGTA+AGG | + | chr3.1:84556498-84556517 | None:intergenic | 50.0% | |
| CCCCAAGTATGGTTCCAGTA+AGG | - | chr3.1:84559889-84559908 | MS.gene32660:intron | 50.0% | |
| CTGAGCGGTTTGAAAAGGGA+TGG | + | chr3.1:84559990-84560009 | None:intergenic | 50.0% | |
| CTTCAGGGTCTTCTCAAACG+TGG | + | chr3.1:84559118-84559137 | None:intergenic | 50.0% | |
| GAGTTTGACATGCAGTGGGA+TGG | - | chr3.1:84555157-84555176 | MS.gene32660:intron | 50.0% | |
| GCAGGGAATTCAGCTACAAG+AGG | + | chr3.1:84556095-84556114 | None:intergenic | 50.0% | |
| GCTAAAGAGTGGTTAGAGGG+AGG | + | chr3.1:84560039-84560058 | None:intergenic | 50.0% | |
| GCTCGCTAAAGAGTGGTTAG+AGG | + | chr3.1:84560043-84560062 | None:intergenic | 50.0% | |
| GGTTCCCGATACTTGTGTTG+TGG | + | chr3.1:84560663-84560682 | None:intergenic | 50.0% | |
| GTCTCAGGTTCGATTCTCTC+CGG | + | chr3.1:84555643-84555662 | None:intergenic | 50.0% | |
| GTGTGTGTGTGTGTGTGTGT+GGG | - | chr3.1:84559806-84559825 | MS.gene32660:intron | 50.0% | |
| TAACTTACGTGTTCGGGGTG+TGG | - | chr3.1:84554299-84554318 | MS.gene32660:intron | 50.0% | |
| TACCAAATCTGTGCGACGCT+TGG | + | chr3.1:84554167-84554186 | None:intergenic | 50.0% | |
| TAGCCCACCTAAATTGGCAC+CGG | - | chr3.1:84555621-84555640 | MS.gene32660:CDS | 50.0% | |
| TGTGTGTGTGTGTGTGTGTG+GGG | - | chr3.1:84559805-84559824 | MS.gene32660:intron | 50.0% | |
| TGTGTGTGTGTGTGTGTGTG+TGG | - | chr3.1:84559805-84559824 | MS.gene32660:intron | 50.0% | |
| TTAGAGGGAGGTGGGAAGTT+AGG | + | chr3.1:84560027-84560046 | None:intergenic | 50.0% | |
| ! | ATCCAAGCGTCGCACAGATT+TGG | - | chr3.1:84554162-84554181 | MS.gene32660:CDS | 50.0% |
| ! | GAATGGAGCTAGTGATGGAG+AGG | - | chr3.1:84559137-84559156 | MS.gene32660:intron | 50.0% |
| ! | TCTCCGGTGCCAATTTAGGT+GGG | + | chr3.1:84555627-84555646 | None:intergenic | 50.0% |
| !! | GTGGTATTGGCTTGGGTCTT+GGG | + | chr3.1:84555684-84555703 | None:intergenic | 50.0% |
| AGACCCAAGCCAATACCACC+AGG | - | chr3.1:84555685-84555704 | MS.gene32660:CDS | 55.0% | |
| AGTGGTCACTTGAGGAGAGG+GGG | + | chr3.1:84560438-84560457 | None:intergenic | 55.0% | |
| CATGCAGTGGGATGGTAACC+CGG | - | chr3.1:84555165-84555184 | MS.gene32660:intron | 55.0% | |
| GTGTGTGTGTGTGTGTGTGG+GGG | - | chr3.1:84559820-84559839 | MS.gene32660:intron | 55.0% | |
| GTTTGCGAGGATGACAGTGG+AGG | - | chr3.1:84554359-84554378 | MS.gene32660:intron | 55.0% | |
| TCGAACCTGAGACCTTGCAG+AGG | - | chr3.1:84555650-84555669 | MS.gene32660:CDS | 55.0% | |
| TGGGCCCAATGGAGTGACAA+TGG | - | chr3.1:84555135-84555154 | MS.gene32660:CDS | 55.0% | |
| TGTGTGTGTGTGTGTGTGGG+GGG | - | chr3.1:84559821-84559840 | MS.gene32660:intron | 55.0% | |
| ! | CTCTCCGGTGCCAATTTAGG+TGG | + | chr3.1:84555628-84555647 | None:intergenic | 55.0% |
| ! | TGGAGCTAGTGATGGAGAGG+AGG | - | chr3.1:84559140-84559159 | MS.gene32660:intron | 55.0% |
| !! | GAAGAGGATAGTGGGCCCAA+TGG | - | chr3.1:84555124-84555143 | MS.gene32660:CDS | 55.0% |
| !! | GGTGGTATTGGCTTGGGTCT+TGG | + | chr3.1:84555685-84555704 | None:intergenic | 55.0% |
| !! | TAAACCCACTTGGGTTGGCC+TGG | + | chr3.1:84555706-84555725 | None:intergenic | 55.0% |
| !! | TGGCCTGGTGGTATTGGCTT+GGG | + | chr3.1:84555691-84555710 | None:intergenic | 55.0% |
| !! | TTGGCCTGGTGGTATTGGCT+TGG | + | chr3.1:84555692-84555711 | None:intergenic | 55.0% |
| !! | TTGGGTTGGCCTGGTGGTAT+TGG | + | chr3.1:84555697-84555716 | None:intergenic | 55.0% |
| ACCACCAGGCCAACCCAAGT+GGG | - | chr3.1:84555699-84555718 | MS.gene32660:CDS | 60.0% | |
| GTGCTCCTCTGCAAGGTCTC+AGG | + | chr3.1:84555658-84555677 | None:intergenic | 60.0% | |
| GTGTGTGTGTGTGTGTGGGG+GGG | - | chr3.1:84559822-84559841 | MS.gene32660:intron | 60.0% | |
| TACCACCAGGCCAACCCAAG+TGG | - | chr3.1:84555698-84555717 | MS.gene32660:CDS | 60.0% | |
| TGTGTGTGTGTGTGTGGGGG+GGG | - | chr3.1:84559823-84559842 | MS.gene32660:intron | 60.0% | |
| ! | TGGGAGTGTGCTCCTCTGCA+AGG | + | chr3.1:84555665-84555684 | None:intergenic | 60.0% |
| GTGTGTGTGTGTGTGGGGGG+GGG | - | chr3.1:84559824-84559843 | MS.gene32660:intron | 65.0% | |
| TGTGTGTGTGTGTGGGGGGG+GGG | - | chr3.1:84559825-84559844 | MS.gene32660:intron | 65.0% | |
| !! | ACCCACTTGGGTTGGCCTGG+TGG | + | chr3.1:84555703-84555722 | None:intergenic | 65.0% |
| GTGTGTGTGTGTGGGGGGGG+GGG | - | chr3.1:84559826-84559845 | MS.gene32660:intron | 70.0% | |
| TGTGTGTGTGTGGGGGGGGG+GGG | - | chr3.1:84559827-84559846 | MS.gene32660:intron | 70.0% | |
| GTGTGTGTGTGGGGGGGGGG+GGG | - | chr3.1:84559828-84559847 | MS.gene32660:intron | 75.0% | |
| TGTGTGTGTGGGGGGGGGGG+GGG | - | chr3.1:84559829-84559848 | MS.gene32660:intron | 75.0% | |
| ! | GTGTGTGTGGGGGGGGGGGG+GGG | - | chr3.1:84559830-84559849 | MS.gene32660:intron | 80.0% |
| ! | TGTGTGTGGGGGGGGGGGGG+GGG | - | chr3.1:84559831-84559850 | MS.gene32660:intron | 80.0% |
| ! | GTGTGTGGGGGGGGGGGGGG+GGG | - | chr3.1:84559832-84559851 | MS.gene32660:intron | 85.0% |
| ! | TGTGTGGGGGGGGGGGGGGG+GGG | - | chr3.1:84559833-84559852 | MS.gene32660:intron | 85.0% |
| ! | GTGTGGGGGGGGGGGGGGGG+GGG | - | chr3.1:84559834-84559853 | MS.gene32660:intron | 90.0% |
| ! | TGTGGGGGGGGGGGGGGGGG+GGG | - | chr3.1:84559835-84559854 | MS.gene32660:intron | 90.0% |
| ! | GTGGGGGGGGGGGGGGGGGG+GGG | - | chr3.1:84559836-84559855 | MS.gene32660:intron | 95.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr3.1:84559837-84559856 | MS.gene32660:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 84554079 | 84560686 | 84554079 | ID=MS.gene32660 |
| chr3.1 | mRNA | 84554079 | 84560686 | 84554079 | ID=MS.gene32660.t1;Parent=MS.gene32660 |
| chr3.1 | exon | 84560582 | 84560686 | 84560582 | ID=MS.gene32660.t1.exon1;Parent=MS.gene32660.t1 |
| chr3.1 | CDS | 84560582 | 84560686 | 84560582 | ID=cds.MS.gene32660.t1;Parent=MS.gene32660.t1 |
| chr3.1 | exon | 84560310 | 84560423 | 84560310 | ID=MS.gene32660.t1.exon2;Parent=MS.gene32660.t1 |
| chr3.1 | CDS | 84560310 | 84560423 | 84560310 | ID=cds.MS.gene32660.t1;Parent=MS.gene32660.t1 |
| chr3.1 | exon | 84560167 | 84560217 | 84560167 | ID=MS.gene32660.t1.exon3;Parent=MS.gene32660.t1 |
| chr3.1 | CDS | 84560167 | 84560217 | 84560167 | ID=cds.MS.gene32660.t1;Parent=MS.gene32660.t1 |
| chr3.1 | exon | 84559924 | 84560044 | 84559924 | ID=MS.gene32660.t1.exon4;Parent=MS.gene32660.t1 |
| chr3.1 | CDS | 84559924 | 84560044 | 84559924 | ID=cds.MS.gene32660.t1;Parent=MS.gene32660.t1 |
| chr3.1 | exon | 84559528 | 84559655 | 84559528 | ID=MS.gene32660.t1.exon5;Parent=MS.gene32660.t1 |
| chr3.1 | CDS | 84559528 | 84559655 | 84559528 | ID=cds.MS.gene32660.t1;Parent=MS.gene32660.t1 |
| chr3.1 | exon | 84558617 | 84558718 | 84558617 | ID=MS.gene32660.t1.exon6;Parent=MS.gene32660.t1 |
| chr3.1 | CDS | 84558617 | 84558718 | 84558617 | ID=cds.MS.gene32660.t1;Parent=MS.gene32660.t1 |
| chr3.1 | exon | 84558242 | 84558316 | 84558242 | ID=MS.gene32660.t1.exon7;Parent=MS.gene32660.t1 |
| chr3.1 | CDS | 84558242 | 84558316 | 84558242 | ID=cds.MS.gene32660.t1;Parent=MS.gene32660.t1 |
| chr3.1 | exon | 84557121 | 84557200 | 84557121 | ID=MS.gene32660.t1.exon8;Parent=MS.gene32660.t1 |
| chr3.1 | CDS | 84557121 | 84557200 | 84557121 | ID=cds.MS.gene32660.t1;Parent=MS.gene32660.t1 |
| chr3.1 | exon | 84556227 | 84556377 | 84556227 | ID=MS.gene32660.t1.exon9;Parent=MS.gene32660.t1 |
| chr3.1 | CDS | 84556227 | 84556377 | 84556227 | ID=cds.MS.gene32660.t1;Parent=MS.gene32660.t1 |
| chr3.1 | exon | 84555910 | 84556140 | 84555910 | ID=MS.gene32660.t1.exon10;Parent=MS.gene32660.t1 |
| chr3.1 | CDS | 84555910 | 84556140 | 84555910 | ID=cds.MS.gene32660.t1;Parent=MS.gene32660.t1 |
| chr3.1 | exon | 84555433 | 84555729 | 84555433 | ID=MS.gene32660.t1.exon11;Parent=MS.gene32660.t1 |
| chr3.1 | CDS | 84555433 | 84555729 | 84555433 | ID=cds.MS.gene32660.t1;Parent=MS.gene32660.t1 |
| chr3.1 | exon | 84555058 | 84555171 | 84555058 | ID=MS.gene32660.t1.exon12;Parent=MS.gene32660.t1 |
| chr3.1 | CDS | 84555058 | 84555171 | 84555058 | ID=cds.MS.gene32660.t1;Parent=MS.gene32660.t1 |
| chr3.1 | exon | 84554079 | 84554225 | 84554079 | ID=MS.gene32660.t1.exon13;Parent=MS.gene32660.t1 |
| chr3.1 | CDS | 84554079 | 84554225 | 84554079 | ID=cds.MS.gene32660.t1;Parent=MS.gene32660.t1 |
| Gene Sequence |
| Protein sequence |
