AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049609


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049609.t1 MTR_3g062890 96.429 224 7 1 1 223 1 224 1.24e-162 448
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049609.t1 AT5G58260 68.780 205 61 1 17 221 8 209 2.04e-101 293
MS.gene049609.t1 AT5G58260 65.409 159 52 1 17 175 8 163 1.78e-71 215

Find 65 sgRNAs with CRISPR-Local

Find 128 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAATCTCAGGCTCATTT+AGG 0.248243 3.2:+59004321 MS.gene049609:intron
ACCACCAGTCCTTTGGCATT+TGG 0.308230 3.2:-59004408 None:intergenic
TGACTTCATTGGAGGAGATT+TGG 0.322097 3.2:+59003521 MS.gene049609:CDS
TAACAGTGATAGAAGTAAAA+TGG 0.325783 3.2:+59003467 MS.gene049609:CDS
GATTTGGTTAAATTTGATAT+TGG 0.335397 3.2:+59003537 MS.gene049609:CDS
GACCTTACAGCTCGTGGTCT+TGG 0.380827 3.2:+59003675 MS.gene049609:CDS
GGGAAATACCACCTTGCTAT+TGG 0.388797 3.2:-59004351 None:intergenic
TGTAGTAGTGGAATGGGATT+AGG 0.388862 3.2:+59003498 MS.gene049609:CDS
GCTATGAAGCTGTTCCTTGT+TGG 0.392835 3.2:-59003393 None:intergenic
ACTTTGGTGAGAGTAGTTTC+AGG 0.404266 3.2:-59003702 None:intergenic
ATGGGATTAGGTGACTTCAT+TGG 0.442642 3.2:+59003510 MS.gene049609:CDS
AAGCCACTCAACGAAATTGC+TGG 0.444434 3.2:+59005319 MS.gene049609:CDS
GTGAAATGTAGTAGTGGAAT+GGG 0.444851 3.2:+59003492 MS.gene049609:CDS
GATCCACACCACCAGTCCTT+TGG 0.451001 3.2:-59004415 None:intergenic
TAACACTGTAAGATTGATGA+TGG 0.453017 3.2:+59003425 MS.gene049609:CDS
TCATTGCTGAATGTGGAAAT+TGG 0.454528 3.2:+59005042 MS.gene049609:CDS
AAGAAACTTACAGGGCAAAC+AGG 0.455859 3.2:-59003729 None:intergenic
TCAGCAATGACCCTCACATT+AGG 0.462929 3.2:-59005029 None:intergenic
ATGCTAGCCTCTGCAAGCTT+AGG 0.465757 3.2:+59003336 MS.gene049609:CDS
TGCTGGACTGACCACTAGTC+AGG 0.471357 3.2:+59005336 MS.gene049609:CDS
ACCAGTCCTTTGGCATTTGG+TGG 0.474336 3.2:-59004405 None:intergenic
TCCAATCTGTAATCAACCTC+TGG 0.475049 3.2:-59004375 None:intergenic
ACCAGAGGTTGATTACAGAT+TGG 0.496749 3.2:+59004374 MS.gene049609:CDS
GCCTCTGCAAGCTTAGGTTG+TGG 0.503375 3.2:+59003342 MS.gene049609:CDS
CACCAAGACCACGAGCTGTA+AGG 0.525141 3.2:-59003677 None:intergenic
TGTTCCTTAGGTTCTCTCCA+AGG 0.526918 3.2:+59004968 MS.gene049609:intron
AAGGAATTGTAGTTCAGCCT+TGG 0.529522 3.2:-59004985 None:intergenic
TTGCTCTGCTGCCAACACTA+AGG 0.531993 3.2:+59005006 MS.gene049609:CDS
CCTCATGAAGGAGGGTATGA+AGG 0.537717 3.2:+59003609 MS.gene049609:CDS
AGTCCAGCAATTTCGTTGAG+TGG 0.542281 3.2:-59005322 None:intergenic
TTTCTTGACCTTACAGCTCG+TGG 0.545690 3.2:+59003669 MS.gene049609:CDS
AGGGCAAACAGGATGAACTT+TGG 0.558412 3.2:-59003718 None:intergenic
AGTGAAATGTAGTAGTGGAA+TGG 0.566502 3.2:+59003491 MS.gene049609:CDS
GGATTAGGTGACTTCATTGG+AGG 0.569123 3.2:+59003513 MS.gene049609:CDS
AATCTGTAATCAACCTCTGG+TGG 0.569201 3.2:-59004372 None:intergenic
ATATATACTCCTCATGAAGG+AGG 0.584569 3.2:+59003600 MS.gene049609:CDS
ACCACCAAATGCCAAAGGAC+TGG 0.587702 3.2:+59004404 MS.gene049609:CDS
CTGTAAGATTGATGATGGGA+TGG 0.592923 3.2:+59003430 MS.gene049609:CDS
TTATCGCGTCTTCAACGTCA+AGG 0.593630 3.2:+59003639 MS.gene049609:CDS
ATGGTAGTGAAATGTAGTAG+TGG 0.594466 3.2:+59003486 MS.gene049609:CDS
TTAAATTTGATATTGGACGT+TGG 0.596364 3.2:+59003544 MS.gene049609:CDS
AACACTAAGGCCTAATGTGA+GGG 0.598775 3.2:+59005019 MS.gene049609:CDS
GCAATATATACTCCTCATGA+AGG 0.600567 3.2:+59003597 MS.gene049609:CDS
GTGAGGGTCATTGCTGAATG+TGG 0.601568 3.2:+59005035 MS.gene049609:CDS
CTATCAAGCTTCCTGACTAG+TGG 0.601785 3.2:-59005347 None:intergenic
CTCACATTAGGCCTTAGTGT+TGG 0.607755 3.2:-59005017 None:intergenic
TGCTGAATGTTAGAGCATGT+TGG 0.609400 3.2:-59003369 None:intergenic
TTAGTGTTGGCAGCAGAGCA+AGG 0.611894 3.2:-59005004 None:intergenic
ATGCCAAAGGACTGGTGGTG+TGG 0.615122 3.2:+59004412 MS.gene049609:CDS
CAACACTAAGGCCTAATGTG+AGG 0.616666 3.2:+59005018 MS.gene049609:CDS
ATCTGTAATCAACCTCTGGT+GGG 0.628296 3.2:-59004371 None:intergenic
TCTGCAAGCTTAGGTTGTGG+AGG 0.630890 3.2:+59003345 MS.gene049609:CDS
AGATTGATGATGGGATGGAG+AGG 0.631584 3.2:+59003435 MS.gene049609:CDS
CCTTCATACCCTCCTTCATG+AGG 0.634611 3.2:-59003609 None:intergenic
TAGGAAAGCAACCAATAGCA+AGG 0.634862 3.2:+59004340 MS.gene049609:CDS
TATATACTCCTCATGAAGGA+GGG 0.636161 3.2:+59003601 MS.gene049609:CDS
GGTGTGGATCATTGAAGCCA+AGG 0.636653 3.2:+59004428 MS.gene049609:CDS
CTAACATTCAGCAACCAACA+AGG 0.653000 3.2:+59003379 MS.gene049609:CDS
TCCACAACCTAAGCTTGCAG+AGG 0.654833 3.2:-59003343 None:intergenic
GCATTACCACCAAATGCCAA+AGG 0.660442 3.2:+59004399 MS.gene049609:CDS
AAGGTGGTATTTCCCACCAG+AGG 0.661184 3.2:+59004359 MS.gene049609:CDS
AACACTGTAAGATTGATGAT+GGG 0.665364 3.2:+59003426 MS.gene049609:CDS
ACCAAATGCCAAAGGACTGG+TGG 0.665822 3.2:+59004407 MS.gene049609:CDS
TGATCAGGAGAAAGTTTACG+TGG 0.681866 3.2:+59005296 MS.gene049609:intron
GAAAGCAACCAATAGCAAGG+TGG 0.723318 3.2:+59004343 MS.gene049609:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAACATTATTAGAAAATT+TGG - chr3.2:59005075-59005094 None:intergenic 10.0%
!!! TTGTTTTTATGAAAATAAAA+GGG + chr3.2:59004658-59004677 MS.gene049609:intron 10.0%
!!! TTTGTTTTTATGAAAATAAA+AGG + chr3.2:59004657-59004676 MS.gene049609:intron 10.0%
!! ATTATTTGTATTATATCTCT+AGG + chr3.2:59004594-59004613 MS.gene049609:intron 15.0%
!! TGAATATATATTCATTTATC+TGG + chr3.2:59004913-59004932 MS.gene049609:intron 15.0%
!!! CTCTTTTCTTATTAATTTTA+TGG + chr3.2:59003820-59003839 MS.gene049609:intron 15.0%
!! AAACAATTTCATCAGAAAAT+AGG - chr3.2:59004636-59004655 None:intergenic 20.0%
!! TCATGGAAAGTTATAAATAA+AGG + chr3.2:59004738-59004757 MS.gene049609:intron 20.0%
!!! AAGCCAAAAAAGAATTTTAA+AGG - chr3.2:59004024-59004043 None:intergenic 20.0%
!!! GATTTGGTTAAATTTGATAT+TGG + chr3.2:59003537-59003556 MS.gene049609:CDS 20.0%
!!! TTTTTATGAAAATAAAAGGG+AGG + chr3.2:59004661-59004680 MS.gene049609:intron 20.0%
! AATTTCATCAGAAAATAGGT+GGG - chr3.2:59004632-59004651 None:intergenic 25.0%
! AATTTCCAACTTTATATGCA+AGG + chr3.2:59005199-59005218 MS.gene049609:intron 25.0%
! ATTGCAACAAATTACAAATG+AGG - chr3.2:59004793-59004812 None:intergenic 25.0%
! GAGATTCTAATATCATATCA+TGG + chr3.2:59004721-59004740 MS.gene049609:intron 25.0%
! TAACAGTGATAGAAGTAAAA+TGG + chr3.2:59003467-59003486 MS.gene049609:CDS 25.0%
! TATATTCACCTAACAACAAT+CGG - chr3.2:59004901-59004920 None:intergenic 25.0%
! TCAAAGCTTCAAAAATAGAA+AGG - chr3.2:59003756-59003775 None:intergenic 25.0%
! TTAAATTTGATATTGGACGT+TGG + chr3.2:59003544-59003563 MS.gene049609:CDS 25.0%
!!! AAATGCTTTTAGGAAAAGTA+TGG + chr3.2:59004568-59004587 MS.gene049609:intron 25.0%
!!! AAGCTTTGAAAATTCTGTTT+AGG + chr3.2:59003767-59003786 MS.gene049609:intron 25.0%
!!! AGATACTCGAATCTATTTTT+AGG - chr3.2:59003891-59003910 None:intergenic 25.0%
!!! ATTCTGTTTTAAGTATGTGA+GGG - chr3.2:59004490-59004509 None:intergenic 25.0%
!!! GCTCCTTTAAAATTCTTTTT+TGG + chr3.2:59004018-59004037 MS.gene049609:intron 25.0%
AACATGAGAATGAGATTTCT+TGG - chr3.2:59005264-59005283 None:intergenic 30.0%
AGAAAGGAAAGAAACTTACA+GGG - chr3.2:59003740-59003759 None:intergenic 30.0%
ATAGATGAAAGATACTCTTG+TGG + chr3.2:59003919-59003938 MS.gene049609:intron 30.0%
CAATTTCATCAGAAAATAGG+TGG - chr3.2:59004633-59004652 None:intergenic 30.0%
CTTGCAATTTCGATACATTT+AGG + chr3.2:59003947-59003966 MS.gene049609:intron 30.0%
GTTTGTTTATGTGAATGATC+AGG + chr3.2:59005281-59005300 MS.gene049609:intron 30.0%
TAACACTGTAAGATTGATGA+TGG + chr3.2:59003425-59003444 MS.gene049609:CDS 30.0%
TAGAAAGGAAAGAAACTTAC+AGG - chr3.2:59003741-59003760 None:intergenic 30.0%
TAGATGAAAGATACTCTTGT+GGG + chr3.2:59003920-59003939 MS.gene049609:intron 30.0%
TTATGGATGAAATTGACCAA+GGG + chr3.2:59003837-59003856 MS.gene049609:intron 30.0%
TTTATATGCAAGGTCTAGTT+TGG + chr3.2:59005209-59005228 MS.gene049609:intron 30.0%
TTTATGGATGAAATTGACCA+AGG + chr3.2:59003836-59003855 MS.gene049609:intron 30.0%
! AAAGGAGCAAACAACTATTT+TGG - chr3.2:59004006-59004025 None:intergenic 30.0%
! AACACTGTAAGATTGATGAT+GGG + chr3.2:59003426-59003445 MS.gene049609:CDS 30.0%
! ACACTTTCAAATGAAAGTGT+TGG - chr3.2:59004085-59004104 None:intergenic 30.0%
! AGAATTTTGTCATGAATCTC+AGG + chr3.2:59004311-59004330 MS.gene049609:intron 30.0%
! CATCTCAATCAAATGCTTTT+AGG + chr3.2:59004558-59004577 MS.gene049609:intron 30.0%
!! CATTCTGTTTTAAGTATGTG+AGG - chr3.2:59004491-59004510 None:intergenic 30.0%
!! CTAAAAGCATTTGATTGAGA+TGG - chr3.2:59004560-59004579 None:intergenic 30.0%
!! TTCTGTTTTAAGTATGTGAG+GGG - chr3.2:59004489-59004508 None:intergenic 30.0%
ACCAAGGGAAAACATATTTG+AGG + chr3.2:59003852-59003871 MS.gene049609:intron 35.0%
ATATATACTCCTCATGAAGG+AGG + chr3.2:59003600-59003619 MS.gene049609:CDS 35.0%
ATGAGAATGAGATTTCTTGG+TGG - chr3.2:59005261-59005280 None:intergenic 35.0%
CAAGCTATGCATTAGAATCA+TGG - chr3.2:59003797-59003816 None:intergenic 35.0%
CTAACAACAATCGGATTTCT+TGG - chr3.2:59004892-59004911 None:intergenic 35.0%
CTAGACCTTGCATATAAAGT+TGG - chr3.2:59005207-59005226 None:intergenic 35.0%
GCAATATATACTCCTCATGA+AGG + chr3.2:59003597-59003616 MS.gene049609:CDS 35.0%
TATATACTCCTCATGAAGGA+GGG + chr3.2:59003601-59003620 MS.gene049609:CDS 35.0%
TCATTGCTGAATGTGGAAAT+TGG + chr3.2:59005042-59005061 MS.gene049609:CDS 35.0%
! AGTGAAATGTAGTAGTGGAA+TGG + chr3.2:59003491-59003510 MS.gene049609:CDS 35.0%
! ATGGTAGTGAAATGTAGTAG+TGG + chr3.2:59003486-59003505 MS.gene049609:CDS 35.0%
! CAAGAAATCCGATTGTTGTT+AGG + chr3.2:59004890-59004909 MS.gene049609:intron 35.0%
! GTGAAATGTAGTAGTGGAAT+GGG + chr3.2:59003492-59003511 MS.gene049609:CDS 35.0%
! TCCTCAAATATGTTTTCCCT+TGG - chr3.2:59003856-59003875 None:intergenic 35.0%
!!! TTTTGGTTCTTGAATGTGTG+AGG - chr3.2:59003989-59004008 None:intergenic 35.0%
AACACTAAGGCCTAATGTGA+GGG + chr3.2:59005019-59005038 MS.gene049609:CDS 40.0%
AAGAAACTTACAGGGCAAAC+AGG - chr3.2:59003732-59003751 None:intergenic 40.0%
AAGGAATTGTAGTTCAGCCT+TGG - chr3.2:59004988-59005007 None:intergenic 40.0%
AATCTGTAATCAACCTCTGG+TGG - chr3.2:59004375-59004394 None:intergenic 40.0%
ACAACAATCGGATTTCTTGG+TGG - chr3.2:59004889-59004908 None:intergenic 40.0%
ACTTTGGTGAGAGTAGTTTC+AGG - chr3.2:59003705-59003724 None:intergenic 40.0%
ATCTGTAATCAACCTCTGGT+GGG - chr3.2:59004374-59004393 None:intergenic 40.0%
ATGGGATTAGGTGACTTCAT+TGG + chr3.2:59003510-59003529 MS.gene049609:CDS 40.0%
CAACAGTACAACGATACATG+TGG + chr3.2:59004138-59004157 MS.gene049609:intron 40.0%
CACATGTATCGTTGTACTGT+TGG - chr3.2:59004140-59004159 None:intergenic 40.0%
CATGAATCTCAGGCTCATTT+AGG + chr3.2:59004321-59004340 MS.gene049609:intron 40.0%
CATTTATCTGGTCAAATGCG+CGG + chr3.2:59004925-59004944 MS.gene049609:intron 40.0%
CTAACATTCAGCAACCAACA+AGG + chr3.2:59003379-59003398 MS.gene049609:CDS 40.0%
CTTCATAGATTATGTCGCAC+TGG + chr3.2:59004256-59004275 MS.gene049609:intron 40.0%
GTAAAGCATAATCCACACCT+TGG - chr3.2:59004448-59004467 None:intergenic 40.0%
GTACAACGATACATGTGGTT+TGG + chr3.2:59004143-59004162 MS.gene049609:intron 40.0%
TAGGAAAGCAACCAATAGCA+AGG + chr3.2:59004340-59004359 MS.gene049609:CDS 40.0%
TCCAATCTGTAATCAACCTC+TGG - chr3.2:59004378-59004397 None:intergenic 40.0%
TGACTTCATTGGAGGAGATT+TGG + chr3.2:59003521-59003540 MS.gene049609:CDS 40.0%
TGATCAGGAGAAAGTTTACG+TGG + chr3.2:59005296-59005315 MS.gene049609:intron 40.0%
TGCTGAATGTGGAAATTGGT+AGG + chr3.2:59005046-59005065 MS.gene049609:intron 40.0%
TGCTGAATGTTAGAGCATGT+TGG - chr3.2:59003372-59003391 None:intergenic 40.0%
TGTTGCAAAACTTGTGCTTG+AGG + chr3.2:59005155-59005174 MS.gene049609:intron 40.0%
TTGCAGTTAAGCTGTGATAC+TGG - chr3.2:59004828-59004847 None:intergenic 40.0%
! ACCAGAGGTTGATTACAGAT+TGG + chr3.2:59004374-59004393 MS.gene049609:CDS 40.0%
! GAAAATAAAAGGGAGGTGCA+AGG + chr3.2:59004668-59004687 MS.gene049609:intron 40.0%
! GCGGTACTAAAATGTTGCTT+TGG + chr3.2:59004944-59004963 MS.gene049609:intron 40.0%
! TGTAGTAGTGGAATGGGATT+AGG + chr3.2:59003498-59003517 MS.gene049609:CDS 40.0%
!! AGTGTTGGTACGTACTACAT+TGG - chr3.2:59004070-59004089 None:intergenic 40.0%
!! CTGTAAGATTGATGATGGGA+TGG + chr3.2:59003430-59003449 MS.gene049609:CDS 40.0%
AAGCCACTCAACGAAATTGC+TGG + chr3.2:59005319-59005338 MS.gene049609:CDS 45.0%
AGGGCAAACAGGATGAACTT+TGG - chr3.2:59003721-59003740 None:intergenic 45.0%
AGTCCAGCAATTTCGTTGAG+TGG - chr3.2:59005325-59005344 None:intergenic 45.0%
CAACACTAAGGCCTAATGTG+AGG + chr3.2:59005018-59005037 MS.gene049609:CDS 45.0%
CTCACATTAGGCCTTAGTGT+TGG - chr3.2:59005020-59005039 None:intergenic 45.0%
GAAAGCAACCAATAGCAAGG+TGG + chr3.2:59004343-59004362 MS.gene049609:CDS 45.0%
GCATTACCACCAAATGCCAA+AGG + chr3.2:59004399-59004418 MS.gene049609:CDS 45.0%
GCTATGAAGCTGTTCCTTGT+TGG - chr3.2:59003396-59003415 None:intergenic 45.0%
GGATTAGGTGACTTCATTGG+AGG + chr3.2:59003513-59003532 MS.gene049609:CDS 45.0%
TCAGCAATGACCCTCACATT+AGG - chr3.2:59005032-59005051 None:intergenic 45.0%
TGTTCCTTAGGTTCTCTCCA+AGG + chr3.2:59004968-59004987 MS.gene049609:intron 45.0%
TTATCGCGTCTTCAACGTCA+AGG + chr3.2:59003639-59003658 MS.gene049609:CDS 45.0%
TTTCTTGACCTTACAGCTCG+TGG + chr3.2:59003669-59003688 MS.gene049609:CDS 45.0%
! GATTTCTTGGTGGTTTCGTC+AGG - chr3.2:59004879-59004898 None:intergenic 45.0%
! GGGAAATACCACCTTGCTAT+TGG - chr3.2:59004354-59004373 None:intergenic 45.0%
!! AGATTGATGATGGGATGGAG+AGG + chr3.2:59003435-59003454 MS.gene049609:CDS 45.0%
!! TGTTGCTTTGGCTGTTCCTT+AGG + chr3.2:59004956-59004975 MS.gene049609:intron 45.0%
AAGGTGGTATTTCCCACCAG+AGG + chr3.2:59004359-59004378 MS.gene049609:CDS 50.0%
ACCAAATGCCAAAGGACTGG+TGG + chr3.2:59004407-59004426 MS.gene049609:CDS 50.0%
ACCACCAAATGCCAAAGGAC+TGG + chr3.2:59004404-59004423 MS.gene049609:CDS 50.0%
ACCACCAGTCCTTTGGCATT+TGG - chr3.2:59004411-59004430 None:intergenic 50.0%
ACCAGTCCTTTGGCATTTGG+TGG - chr3.2:59004408-59004427 None:intergenic 50.0%
CCTTCATACCCTCCTTCATG+AGG - chr3.2:59003612-59003631 None:intergenic 50.0%
GGATCATTGAAGCCAAGGTG+TGG + chr3.2:59004433-59004452 MS.gene049609:intron 50.0%
GGTGTGGATCATTGAAGCCA+AGG + chr3.2:59004428-59004447 MS.gene049609:CDS 50.0%
GTGAGGGTCATTGCTGAATG+TGG + chr3.2:59005035-59005054 MS.gene049609:CDS 50.0%
TCAGCCTTGGAGAGAACCTA+AGG - chr3.2:59004975-59004994 None:intergenic 50.0%
TCCACAACCTAAGCTTGCAG+AGG - chr3.2:59003346-59003365 None:intergenic 50.0%
TTGCTCTGCTGCCAACACTA+AGG + chr3.2:59005006-59005025 MS.gene049609:CDS 50.0%
! ATGCTAGCCTCTGCAAGCTT+AGG + chr3.2:59003336-59003355 MS.gene049609:CDS 50.0%
! CCTCATGAAGGAGGGTATGA+AGG + chr3.2:59003609-59003628 MS.gene049609:CDS 50.0%
! TCTGCAAGCTTAGGTTGTGG+AGG + chr3.2:59003345-59003364 MS.gene049609:CDS 50.0%
!! TTAGTGTTGGCAGCAGAGCA+AGG - chr3.2:59005007-59005026 None:intergenic 50.0%
CACCAAGACCACGAGCTGTA+AGG - chr3.2:59003680-59003699 None:intergenic 55.0%
GACCTTACAGCTCGTGGTCT+TGG + chr3.2:59003675-59003694 MS.gene049609:CDS 55.0%
GATCCACACCACCAGTCCTT+TGG - chr3.2:59004418-59004437 None:intergenic 55.0%
TGCTGGACTGACCACTAGTC+AGG + chr3.2:59005336-59005355 MS.gene049609:CDS 55.0%
! ATGCCAAAGGACTGGTGGTG+TGG + chr3.2:59004412-59004431 MS.gene049609:CDS 55.0%
! GCCTCTGCAAGCTTAGGTTG+TGG + chr3.2:59003342-59003361 MS.gene049609:CDS 55.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 59003336 59005366 59003336 ID=MS.gene049609
chr3.2 mRNA 59003336 59005366 59003336 ID=MS.gene049609.t1;Parent=MS.gene049609
chr3.2 exon 59003336 59003740 59003336 ID=MS.gene049609.t1.exon1;Parent=MS.gene049609.t1
chr3.2 CDS 59003336 59003740 59003336 ID=cds.MS.gene049609.t1;Parent=MS.gene049609.t1
chr3.2 exon 59004333 59004449 59004333 ID=MS.gene049609.t1.exon2;Parent=MS.gene049609.t1
chr3.2 CDS 59004333 59004449 59004333 ID=cds.MS.gene049609.t1;Parent=MS.gene049609.t1
chr3.2 exon 59004978 59005063 59004978 ID=MS.gene049609.t1.exon3;Parent=MS.gene049609.t1
chr3.2 CDS 59004978 59005063 59004978 ID=cds.MS.gene049609.t1;Parent=MS.gene049609.t1
chr3.2 exon 59005303 59005366 59005303 ID=MS.gene049609.t1.exon4;Parent=MS.gene049609.t1
chr3.2 CDS 59005303 59005366 59005303 ID=cds.MS.gene049609.t1;Parent=MS.gene049609.t1
Gene Sequence

>MS.gene049609

ATGCTAGCCTCTGCAAGCTTAGGTTGTGGAGGACCAACATGCTCTAACATTCAGCAACCAACAAGGAACAGCTTCATAGCTGAAAATCATAACACTGTAAGATTGATGATGGGATGGAGAGGAAAACAATGTAACAGTGATAGAAGTAAAATGGTAGTGAAATGTAGTAGTGGAATGGGATTAGGTGACTTCATTGGAGGAGATTTGGTTAAATTTGATATTGGACGTTGGCTTTCAGATGTTGAAGAACATAAAGCACTTGCAATATATACTCCTCATGAAGGAGGGTATGAAGGACGTTACTTATCGCGTCTTCAACGTCAAGGTTACTATTTTCTTGACCTTACAGCTCGTGGTCTTGGTGATCCTGAAACTACTCTCACCAAAGTTCATCCTGTTTGCCCTGTAAGTTTCTTTCCTTTCTATTTTTGAAGCTTTGAAAATTCTGTTTAGGTTCTCCATGATTCTAATGCATAGCTTGTGTCTCTTTTCTTATTAATTTTATGGATGAAATTGACCAAGGGAAAACATATTTGAGGACTATATTGACTACCTAAAAATAGATTCGAGTATCTTATAAATGATAGATGAAAGATACTCTTGTGGGCATGCTTGCAATTTCGATACATTTAGGAACTATAGTGATAGCGCCTCACACATTCAAGAACCAAAATAGTTGTTTGCTCCTTTAAAATTCTTTTTTGGCTTTCAATGATTAATAGCTATTATTACCAATGTAGTACGTACCAACACTTTCATTTGAAAGTGTGTCTTGTGTCTGACATGTGTCAGTGTATGACACCAACAGTACAACGATACATGTGGTTTGGTTACATTCTATAACTTTTTTTTTTGAAACTGTTACTAGTTTCTATGCGTAAGTGTCAATGTCGTGTCAAATGAGTGTTTCTGTTTTAGTGCTTCATAGATTATGTCGCACTGGTTCATAGATTATTACTCAAGTTTACACTACATAGAATTTTGTCATGAATCTCAGGCTCATTTAGGAAAGCAACCAATAGCAAGGTGGTATTTCCCACCAGAGGTTGATTACAGATTGGAAGCATTACCACCAAATGCCAAAGGACTGGTGGTGTGGATCATTGAAGCCAAGGTGTGGATTATGCTTTACTTTTATTACATTAGAGTACCCCTCACATACTTAAAACAGAATGATCATTATTTTTATGTTTTCTCACATTGATATTTATTATAAGTACACCATCTCAATCAAATGCTTTTAGGAAAAGTATGGTGAATTATTTGTATTATATCTCTAGGACAATACACAAACCCACCTATTTTCTGATGAAATTGTTTTTTTGTTTTTATGAAAATAAAAGGGAGGTGCAAGGATTGATCTCTACATGAGTTATTAGTCTATAGAGATTCTAATATCATATCATGGAAAGTTATAAATAAAGGTCTGCAGTCACAATATCGAAAAAATCGAGCCTCATTTGTAATTTGTTGCAATTTTTCTTAATATCCAGTATCACAGCTTAACTGCAACAACAATTGCAATTTTAAACTTTGATATCCTGACGAAACCACCAAGAAATCCGATTGTTGTTAGGTGAATATATATTCATTTATCTGGTCAAATGCGCGGTACTAAAATGTTGCTTTGGCTGTTCCTTAGGTTCTCTCCAAGGCTGAACTACAATTCCTTGCTCTGCTGCCAACACTAAGGCCTAATGTGAGGGTCATTGCTGAATGTGGAAATTGGTAGGATGCCAAATTTTCTAATAATGTTTTTGTAGATTTTACAGTTTTTATTCTTCTTTGCTTATTTCTTTTGATATTTATCAGTGTTTTCTGTTGCAAAACTTGTGCTTGAGGACTTGAATTTACTTCAGTTTAAATTTCCAACTTTATATGCAAGGTCTAGTTTGGATGAACATCTAGCAATAAGAGCTTCTCCACCAAGAAATCTCATTCTCATGTTTGTTTATGTGAATGATCAGGAGAAAGTTTACGTGGAAGCCACTCAACGAAATTGCTGGACTGACCACTAGTCAGGAAGCTTGA

Protein sequence

>MS.gene049609.t1

MLASASLGCGGPTCSNIQQPTRNSFIAENHNTVRLMMGWRGKQCNSDRSKMVVKCSSGMGLGDFIGGDLVKFDIGRWLSDVEEHKALAIYTPHEGGYEGRYLSRLQRQGYYFLDLTARGLGDPETTLTKVHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSKAELQFLALLPTLRPNVRVIAECGNWRKFTWKPLNEIAGLTTSQEA