Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33076.t1 | XP_024631069.1 | 95.5 | 356 | 13 | 3 | 1 | 355 | 2 | 355 | 3.30E-167 | 597.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33076.t1 | Q6ZIK0 | 74.1 | 290 | 74 | 1 | 64 | 353 | 74 | 362 | 1.7e-127 | 457.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33076.t1 | B7FHY7 | 95.5 | 356 | 13 | 3 | 1 | 355 | 2 | 355 | 2.3e-167 | 597.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049757 | MS.gene33076 | 0.821481 | 3.95E-53 | -1.69E-46 |
| MS.gene050553 | MS.gene33076 | 0.844313 | 8.17E-59 | -1.69E-46 |
| MS.gene05080 | MS.gene33076 | 0.806486 | 8.04E-50 | -1.69E-46 |
| MS.gene051521 | MS.gene33076 | 0.839075 | 1.97E-57 | -1.69E-46 |
| MS.gene051838 | MS.gene33076 | 0.807143 | 5.84E-50 | -1.69E-46 |
| MS.gene051874 | MS.gene33076 | 0.800856 | 1.18E-48 | -1.69E-46 |
| MS.gene052469 | MS.gene33076 | 0.817624 | 2.99E-52 | -1.69E-46 |
| MS.gene05494 | MS.gene33076 | 0.820323 | 7.29E-53 | -1.69E-46 |
| MS.gene055741 | MS.gene33076 | 0.829294 | 5.58E-55 | -1.69E-46 |
| MS.gene055744 | MS.gene33076 | 0.825204 | 5.33E-54 | -1.69E-46 |
| MS.gene056283 | MS.gene33076 | 0.841375 | 4.94E-58 | -1.69E-46 |
| MS.gene058120 | MS.gene33076 | 0.802498 | 5.45E-49 | -1.69E-46 |
| MS.gene058448 | MS.gene33076 | 0.995538 | 2.83E-217 | -1.69E-46 |
| MS.gene059717 | MS.gene33076 | 0.813661 | 2.29E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33076.t1 | MTR_1g014690 | 94.663 | 356 | 16 | 3 | 1 | 355 | 2 | 355 | 0.0 | 625 |
| MS.gene33076.t1 | MTR_1g014690 | 78.371 | 356 | 19 | 5 | 1 | 355 | 2 | 300 | 2.42e-168 | 471 |
| MS.gene33076.t1 | MTR_4g036005 | 70.199 | 151 | 42 | 3 | 67 | 216 | 16 | 164 | 1.26e-70 | 223 |
| MS.gene33076.t1 | MTR_3g032530 | 27.778 | 198 | 131 | 3 | 57 | 253 | 34 | 220 | 2.62e-18 | 85.1 |
| MS.gene33076.t1 | MTR_3g032530 | 27.807 | 187 | 123 | 3 | 68 | 253 | 2 | 177 | 7.73e-18 | 83.2 |
| MS.gene33076.t1 | MTR_3g114780 | 26.230 | 244 | 161 | 6 | 57 | 297 | 63 | 290 | 2.33e-16 | 79.7 |
| MS.gene33076.t1 | MTR_6g069600 | 34.906 | 106 | 67 | 1 | 130 | 235 | 290 | 393 | 4.38e-15 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33076.t1 | AT1G64970 | 73.958 | 288 | 73 | 1 | 64 | 349 | 60 | 347 | 9.17e-160 | 451 |
| MS.gene33076.t1 | AT3G18000 | 37.391 | 115 | 70 | 1 | 130 | 244 | 284 | 396 | 3.17e-17 | 83.2 |
| MS.gene33076.t1 | AT1G73600 | 36.607 | 112 | 69 | 1 | 130 | 241 | 283 | 392 | 4.48e-17 | 82.8 |
| MS.gene33076.t1 | AT1G73600 | 36.607 | 112 | 69 | 1 | 130 | 241 | 297 | 406 | 4.90e-17 | 82.4 |
| MS.gene33076.t1 | AT1G48600 | 36.522 | 115 | 71 | 1 | 130 | 244 | 284 | 396 | 1.31e-16 | 81.3 |
| MS.gene33076.t1 | AT1G48600 | 36.522 | 115 | 71 | 1 | 130 | 244 | 268 | 380 | 1.34e-16 | 81.3 |
| MS.gene33076.t1 | AT5G13710 | 27.473 | 182 | 121 | 2 | 57 | 238 | 34 | 204 | 1.37e-16 | 80.1 |
| MS.gene33076.t1 | AT5G13710 | 27.473 | 182 | 121 | 2 | 57 | 238 | 34 | 204 | 1.37e-16 | 80.1 |
| MS.gene33076.t1 | AT1G20330 | 24.679 | 312 | 204 | 8 | 57 | 353 | 63 | 358 | 5.89e-16 | 78.6 |
| MS.gene33076.t1 | AT1G76090 | 24.839 | 310 | 204 | 9 | 57 | 352 | 63 | 357 | 8.46e-16 | 78.2 |
Find 93 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCCTTTGTTGCTCCATTT+TGG | 0.111682 | 1.1:-6950723 | MS.gene33076:CDS |
| CTGGTATATGGGAGAATATT+TGG | 0.153591 | 1.1:-6954351 | MS.gene33076:CDS |
| AGGTACCTGGCCAAGAAATT+TGG | 0.197026 | 1.1:-6952036 | MS.gene33076:CDS |
| ACAACTTGCCCCAAATTTCT+TGG | 0.230657 | 1.1:+6952026 | None:intergenic |
| ACACCATGTTACTATTATTA+TGG | 0.233170 | 1.1:+6951268 | None:intergenic |
| ATGATGAGTCTTCTGGTATA+TGG | 0.237023 | 1.1:-6954363 | MS.gene33076:CDS |
| TGGTATATGGGAGAATATTT+GGG | 0.285510 | 1.1:-6954350 | MS.gene33076:CDS |
| CGTATCACTGCTGGCCAAAA+TGG | 0.295543 | 1.1:+6950709 | None:intergenic |
| GGTACCTGGCCAAGAAATTT+GGG | 0.302133 | 1.1:-6952035 | MS.gene33076:CDS |
| TAATAGTAACATGGTGTCAT+AGG | 0.305812 | 1.1:-6951262 | MS.gene33076:CDS |
| GCTATGCCATTGATGATAGA+AGG | 0.319042 | 1.1:-6950060 | MS.gene33076:CDS |
| GTTGATGTTGGGTGTGGCAT+AGG | 0.327476 | 1.1:-6952069 | MS.gene33076:CDS |
| TTGATGTTGGGTGTGGCATA+GGG | 0.339110 | 1.1:-6952068 | MS.gene33076:CDS |
| TGTTGTAGGGATTCTTCATT+CGG | 0.342059 | 1.1:+6951230 | None:intergenic |
| AGGCTTTCGACATGTGATAA+TGG | 0.352068 | 1.1:+6950011 | None:intergenic |
| CATTGATGATAGAAGGATTC+AGG | 0.353317 | 1.1:-6950053 | MS.gene33076:CDS |
| ACTTGAAACCATGTCCCTTC+AGG | 0.364722 | 1.1:-6951126 | MS.gene33076:intron |
| TTCAGCAGTAGAAGAAGAAA+AGG | 0.367968 | 1.1:-6954481 | MS.gene33076:CDS |
| TTAGCTCTTTCAGCTTGAAC+AGG | 0.369380 | 1.1:+6951985 | None:intergenic |
| ATTAGGACCTTTGGTTTGTT+AGG | 0.377795 | 1.1:+6951452 | None:intergenic |
| GTTGTAGGGATTCTTCATTC+GGG | 0.388840 | 1.1:+6951231 | None:intergenic |
| GATCCTTCTCCCATTGTTGT+AGG | 0.391437 | 1.1:+6951216 | None:intergenic |
| CCAACATCAACTACACTCTT+TGG | 0.405985 | 1.1:+6952081 | None:intergenic |
| TTTCTTCTTCTACTGCTGAA+TGG | 0.407358 | 1.1:+6954484 | None:intergenic |
| ACTAGATCAAACTGGCCGTC+AGG | 0.424197 | 1.1:+6951503 | None:intergenic |
| GTTAGCACGGGTAGCAGCAC+CGG | 0.429524 | 1.1:-6951297 | MS.gene33076:CDS |
| GAAACAGAAACAGTAGAATC+AGG | 0.439311 | 1.1:+6954298 | None:intergenic |
| TGATGAGTCTTCTGGTATAT+GGG | 0.439939 | 1.1:-6954362 | MS.gene33076:CDS |
| GCTCAGATGATCCATCAAAA+TGG | 0.445713 | 1.1:-6952104 | MS.gene33076:intron |
| TGAAGAATCCCTACAACAAT+GGG | 0.467250 | 1.1:-6951225 | MS.gene33076:CDS |
| ATCCTTCTCCCATTGTTGTA+GGG | 0.488458 | 1.1:+6951217 | None:intergenic |
| TGCTCAAGGATTAGCTGATA+AGG | 0.488710 | 1.1:-6951950 | MS.gene33076:intron |
| CTGAATCCTTCTATCATCAA+TGG | 0.489050 | 1.1:+6950054 | None:intergenic |
| CTTACCACTTCGCAAGATTG+AGG | 0.489090 | 1.1:+6950660 | None:intergenic |
| GAAAGAAGCGATGGTGGTAA+TGG | 0.494033 | 1.1:-6954431 | MS.gene33076:CDS |
| AGTTTGTTGGTGAGTTAGCA+CGG | 0.502667 | 1.1:-6951310 | MS.gene33076:CDS |
| TTGCCCCAAATTTCTTGGCC+AGG | 0.505728 | 1.1:+6952031 | None:intergenic |
| TGGGGTGATCATATGCATCA+TGG | 0.511664 | 1.1:-6954331 | MS.gene33076:CDS |
| ATGAAGAATCCCTACAACAA+TGG | 0.511742 | 1.1:-6951226 | MS.gene33076:CDS |
| AGAGAAGAAGAAACTTCAGT+TGG | 0.512900 | 1.1:-6954401 | MS.gene33076:CDS |
| TTGACCACACTAGATCAAAC+TGG | 0.513141 | 1.1:+6951495 | None:intergenic |
| AGGGTCATTGCGTCTATCAA+TGG | 0.514463 | 1.1:-6954461 | MS.gene33076:CDS |
| AATGCTCTGGCTGCTGCTCA+AGG | 0.516953 | 1.1:-6951964 | MS.gene33076:CDS |
| CGTTCAGCATTAACATGGAA+GGG | 0.521906 | 1.1:-6950688 | MS.gene33076:CDS |
| AGGACATCAAATCAGCAGAT+TGG | 0.524852 | 1.1:-6950747 | MS.gene33076:CDS |
| AATAGTAACATGGTGTCATA+GGG | 0.525266 | 1.1:-6951261 | MS.gene33076:CDS |
| TCAAACTGGCCGTCAGGGAA+TGG | 0.527365 | 1.1:+6951509 | None:intergenic |
| GATGTTGGGTGTGGCATAGG+GGG | 0.529490 | 1.1:-6952066 | MS.gene33076:CDS |
| CCAAAGAGTGTAGTTGATGT+TGG | 0.533283 | 1.1:-6952081 | MS.gene33076:CDS |
| TGGTACAGTAGTAGTAATGA+TGG | 0.537552 | 1.1:+6954504 | None:intergenic |
| TGATGTTGGGTGTGGCATAG+GGG | 0.537744 | 1.1:-6952067 | MS.gene33076:CDS |
| AGCTGAAAGAGCTAATGCTC+TGG | 0.537978 | 1.1:-6951977 | MS.gene33076:CDS |
| GAGAAGAAGAAACTTCAGTT+GGG | 0.540045 | 1.1:-6954400 | MS.gene33076:CDS |
| CAAAGAGTGTAGTTGATGTT+GGG | 0.545229 | 1.1:-6952080 | MS.gene33076:CDS |
| AAATTTGGGGCAAGTTGTGT+AGG | 0.545845 | 1.1:-6952021 | MS.gene33076:CDS |
| TCAGCAGTTGAGCACCACTC+TGG | 0.547647 | 1.1:+6951161 | None:intergenic |
| GGCCAAAATGGAGCAACAAA+GGG | 0.551098 | 1.1:+6950721 | None:intergenic |
| GTTTGATCTAGTGTGGTCAA+TGG | 0.552518 | 1.1:-6951492 | MS.gene33076:CDS |
| TGGCCAAAATGGAGCAACAA+AGG | 0.554035 | 1.1:+6950720 | None:intergenic |
| TTAGCACGGGTAGCAGCACC+GGG | 0.557174 | 1.1:-6951296 | MS.gene33076:CDS |
| ACGTTCAGCATTAACATGGA+AGG | 0.559901 | 1.1:-6950689 | MS.gene33076:CDS |
| ACTATTATTATGGTGCCACC+CGG | 0.564921 | 1.1:+6951278 | None:intergenic |
| CTAGATCAAACTGGCCGTCA+GGG | 0.569043 | 1.1:+6951504 | None:intergenic |
| ATTAACTACCTGAAGGGACA+TGG | 0.576544 | 1.1:+6951118 | None:intergenic |
| ATCCCTACAACAATGGGAGA+AGG | 0.577935 | 1.1:-6951219 | MS.gene33076:CDS |
| TCAGCAGTAGAAGAAGAAAA+GGG | 0.587307 | 1.1:-6954480 | MS.gene33076:CDS |
| AATGCTGAACGTATCACTGC+TGG | 0.591367 | 1.1:+6950700 | None:intergenic |
| GGCGGCGGTGAAAGAAGCGA+TGG | 0.597232 | 1.1:-6954440 | MS.gene33076:CDS |
| TAGCTCTTTCAGCTTGAACA+GGG | 0.597928 | 1.1:+6951986 | None:intergenic |
| TAGAGCGTCAGCAACTTGAA+AGG | 0.605316 | 1.1:+6951538 | None:intergenic |
| AGTGTAGTTGATGTTGGGTG+TGG | 0.612189 | 1.1:-6952075 | MS.gene33076:CDS |
| ATATTAATTAACTACCTGAA+GGG | 0.613275 | 1.1:+6951112 | None:intergenic |
| TCGAAAGCCTGAAAACGCAG+AGG | 0.616363 | 1.1:-6949998 | MS.gene33076:CDS |
| GTTTGTTGGTGAGTTAGCAC+GGG | 0.616520 | 1.1:-6951309 | MS.gene33076:CDS |
| ATTGCGTCTATCAATGGCGG+CGG | 0.617943 | 1.1:-6954455 | MS.gene33076:CDS |
| GGCGGTGAAAGAAGCGATGG+TGG | 0.621331 | 1.1:-6954437 | MS.gene33076:CDS |
| TTGTAGGGATTCTTCATTCG+GGG | 0.621575 | 1.1:+6951232 | None:intergenic |
| TGATACGTTCAGCATTAACA+TGG | 0.622052 | 1.1:-6950693 | MS.gene33076:CDS |
| GGTATATGGGAGAATATTTG+GGG | 0.625495 | 1.1:-6954349 | MS.gene33076:CDS |
| TTCACCTCAATCTTGCGAAG+TGG | 0.629679 | 1.1:-6950664 | MS.gene33076:intron |
| ATGGTATCTCTGTGGTGCTG+AGG | 0.633262 | 1.1:+6954523 | None:intergenic |
| GATGATAGAAGGATTCAGGA+AGG | 0.633554 | 1.1:-6950049 | MS.gene33076:CDS |
| ATGATAGAAGGATTCAGGAA+GGG | 0.634567 | 1.1:-6950048 | MS.gene33076:CDS |
| ACGGCCAGTTTGATCTAGTG+TGG | 0.645283 | 1.1:-6951499 | MS.gene33076:CDS |
| GTCATTGCGTCTATCAATGG+CGG | 0.656657 | 1.1:-6954458 | MS.gene33076:CDS |
| GCATATGCCTAACAAACCAA+AGG | 0.660215 | 1.1:-6951459 | MS.gene33076:intron |
| CGAAAGCCTGAAAACGCAGA+GGG | 0.662434 | 1.1:-6949997 | MS.gene33076:CDS |
| GTACCTGGCCAAGAAATTTG+GGG | 0.663725 | 1.1:-6952034 | MS.gene33076:CDS |
| GCACCATAATAATAGTAACA+TGG | 0.689337 | 1.1:-6951271 | MS.gene33076:CDS |
| CTAGAACAACCATTCCCTGA+CGG | 0.703190 | 1.1:-6951518 | MS.gene33076:CDS |
| GCACGGGTAGCAGCACCGGG+TGG | 0.705737 | 1.1:-6951293 | MS.gene33076:CDS |
| CTAGTGTGGTCAATGGAGAG+CGG | 0.706985 | 1.1:-6951485 | MS.gene33076:CDS |
| TAGTAATGATGGTATCTCTG+TGG | 0.733690 | 1.1:+6954515 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTAAAAAAATAGATGATAA+AGG | + | chr1.1:6952665-6952684 | None:intergenic | 15.0% |
| !!! | AAACAATTTTTGTATGAAAT+AGG | + | chr1.1:6953236-6953255 | None:intergenic | 15.0% |
| !!! | TTTTGAACAATTTCTTATAT+TGG | - | chr1.1:6953601-6953620 | MS.gene33076:intron | 15.0% |
| !!! | TTTTTTTTTTCATTTTTTGC+TGG | - | chr1.1:6952380-6952399 | MS.gene33076:intron | 15.0% |
| !! | AATCATTAATTTATCACGTT+TGG | - | chr1.1:6950939-6950958 | MS.gene33076:intron | 20.0% |
| !! | ACATTAGTGTTTATAATGAT+AGG | - | chr1.1:6950845-6950864 | MS.gene33076:intron | 20.0% |
| !! | ATATTAATTAACTACCTGAA+GGG | + | chr1.1:6953458-6953477 | None:intergenic | 20.0% |
| !! | ATCATTAATTTATCACGTTT+GGG | - | chr1.1:6950940-6950959 | MS.gene33076:intron | 20.0% |
| !! | CAATAAACATATTTAACTCT+GGG | + | chr1.1:6951306-6951325 | None:intergenic | 20.0% |
| !! | GGAGTATATAACATTAATTT+GGG | + | chr1.1:6954241-6954260 | None:intergenic | 20.0% |
| !! | TATATTAATTAACTACCTGA+AGG | + | chr1.1:6953459-6953478 | None:intergenic | 20.0% |
| !! | TATTGATATGGAAAAACTTA+AGG | - | chr1.1:6953678-6953697 | MS.gene33076:intron | 20.0% |
| !! | TCAAATAATTCAATCAAATC+AGG | + | chr1.1:6950703-6950722 | None:intergenic | 20.0% |
| !! | TGAACACTTATATTAGTATT+TGG | - | chr1.1:6953553-6953572 | MS.gene33076:intron | 20.0% |
| !! | TGGAGTATATAACATTAATT+TGG | + | chr1.1:6954242-6954261 | None:intergenic | 20.0% |
| !! | TTTCCATATCAATAAGTTTA+CGG | + | chr1.1:6953672-6953691 | None:intergenic | 20.0% |
| !!! | AAACTATCTTTGAAAACTTA+TGG | + | chr1.1:6950774-6950793 | None:intergenic | 20.0% |
| !!! | AATCTTCATTTTTTCATCTA+AGG | + | chr1.1:6950916-6950935 | None:intergenic | 20.0% |
| !!! | TAAATTGATAATGATCTTGT+TGG | - | chr1.1:6954411-6954430 | MS.gene33076:CDS | 20.0% |
| !!! | TATCGTAATTTTGATACATT+TGG | + | chr1.1:6951038-6951057 | None:intergenic | 20.0% |
| !!! | TATTGTTAGTATTTTGTTGA+GGG | - | chr1.1:6954087-6954106 | MS.gene33076:intron | 20.0% |
| !!! | TTTGCTGGTAAATTTTATTT+TGG | - | chr1.1:6952395-6952414 | MS.gene33076:intron | 20.0% |
| ! | ACACCATGTTACTATTATTA+TGG | + | chr1.1:6953302-6953321 | None:intergenic | 25.0% |
| ! | ATATTTAAACCGTGTAACTT+GGG | + | chr1.1:6951575-6951594 | None:intergenic | 25.0% |
| ! | ATTAAGATGTATATCCAAAC+AGG | - | chr1.1:6950889-6950908 | MS.gene33076:intron | 25.0% |
| ! | ATTATAATGAATCTCACCAA+GGG | - | chr1.1:6952723-6952742 | MS.gene33076:intron | 25.0% |
| ! | ATTTCACACATATTCAGAAA+AGG | + | chr1.1:6954348-6954367 | None:intergenic | 25.0% |
| ! | CAAAAATTGTTTCAGTTTGT+TGG | - | chr1.1:6953244-6953263 | MS.gene33076:intron | 25.0% |
| ! | CCAATAAACATATTTAACTC+TGG | + | chr1.1:6951307-6951326 | None:intergenic | 25.0% |
| ! | CCAGAGTTAAATATGTTTAT+TGG | - | chr1.1:6951304-6951323 | MS.gene33076:CDS | 25.0% |
| ! | GTCTTATGTTAGTAATTTCA+TGG | + | chr1.1:6951161-6951180 | None:intergenic | 25.0% |
| ! | GTGTCTTTCATTAATCAATT+TGG | - | chr1.1:6951134-6951153 | MS.gene33076:CDS | 25.0% |
| ! | TAACCGTAAACTTATTGATA+TGG | - | chr1.1:6953666-6953685 | MS.gene33076:intron | 25.0% |
| ! | TATCAATTTATGTACTCCTT+TGG | + | chr1.1:6954401-6954420 | None:intergenic | 25.0% |
| ! | TATTATAATGAATCTCACCA+AGG | - | chr1.1:6952722-6952741 | MS.gene33076:intron | 25.0% |
| ! | TCATTAATTTATCACGTTTG+GGG | - | chr1.1:6950941-6950960 | MS.gene33076:intron | 25.0% |
| ! | TTAAGATGTATATCCAAACA+GGG | - | chr1.1:6950890-6950909 | MS.gene33076:intron | 25.0% |
| ! | TTACACGGTTTAAATATCTT+GGG | - | chr1.1:6951578-6951597 | MS.gene33076:intron | 25.0% |
| !! | AAAAAAGAGAGCATATATGT+AGG | - | chr1.1:6950676-6950695 | MS.gene33076:CDS | 25.0% |
| !! | AAAAAGAGAGCATATATGTA+GGG | - | chr1.1:6950677-6950696 | MS.gene33076:CDS | 25.0% |
| !! | ATATGATACGTGTTTTCAAT+CGG | + | chr1.1:6952809-6952828 | None:intergenic | 25.0% |
| !! | GTATTGTTAGTATTTTGTTG+AGG | - | chr1.1:6954086-6954105 | MS.gene33076:intron | 25.0% |
| !!! | AAATTTTATTTTGGTTGGAC+TGG | - | chr1.1:6952404-6952423 | MS.gene33076:intron | 25.0% |
| !!! | AATCATTTTAGTCCCTAAAT+GGG | + | chr1.1:6951483-6951502 | None:intergenic | 25.0% |
| !!! | ATTGGAGTAAATTGTCATTT+TGG | - | chr1.1:6951322-6951341 | MS.gene33076:intron | 25.0% |
| !!! | CTGGTAAATTTTATTTTGGT+TGG | - | chr1.1:6952399-6952418 | MS.gene33076:intron | 25.0% |
| !!! | TAATCATTTTAGTCCCTAAA+TGG | + | chr1.1:6951484-6951503 | None:intergenic | 25.0% |
| !!! | TCAAAGAGTTTTGAATCATA+CGG | + | chr1.1:6950316-6950335 | None:intergenic | 25.0% |
| !!! | TCTTTGGTTAGTTTTGTTAT+CGG | - | chr1.1:6951109-6951128 | MS.gene33076:intron | 25.0% |
| !!! | TTTTGGTCTTTAAATGTGTA+AGG | + | chr1.1:6951238-6951257 | None:intergenic | 25.0% |
| AACCATTAGAAAGGATTTAG+AGG | - | chr1.1:6952056-6952075 | MS.gene33076:CDS | 30.0% | |
| AACCTATGAGTTAAATTGTC+AGG | - | chr1.1:6950973-6950992 | MS.gene33076:intron | 30.0% | |
| AACCTGACAATTTAACTCAT+AGG | + | chr1.1:6950978-6950997 | None:intergenic | 30.0% | |
| AGCTGAAAGGAAAGTTATAT+CGG | - | chr1.1:6951716-6951735 | MS.gene33076:intron | 30.0% | |
| ATACAAGTTCTTAATACCCT+TGG | + | chr1.1:6952742-6952761 | None:intergenic | 30.0% | |
| ATACATGCATCAATAACAAC+AGG | + | chr1.1:6952443-6952462 | None:intergenic | 30.0% | |
| ATGAGTTAAATTGTCAGGTT+TGG | - | chr1.1:6950978-6950997 | MS.gene33076:intron | 30.0% | |
| CATTAGAGAAACCATTAGAA+AGG | - | chr1.1:6952047-6952066 | MS.gene33076:CDS | 30.0% | |
| CCAGTATGCATTTATGATAA+TGG | - | chr1.1:6954259-6954278 | MS.gene33076:CDS | 30.0% | |
| CCATTATCATAAATGCATAC+TGG | + | chr1.1:6954262-6954281 | None:intergenic | 30.0% | |
| CTTTCTAATGGTTTCTCTAA+TGG | + | chr1.1:6952049-6952068 | None:intergenic | 30.0% | |
| GAATAGAATCTACTCATATG+TGG | - | chr1.1:6952763-6952782 | MS.gene33076:intron | 30.0% | |
| GAGATTGATTACAACTTTAC+TGG | + | chr1.1:6953203-6953222 | None:intergenic | 30.0% | |
| GATATTTAAACCGTGTAACT+TGG | + | chr1.1:6951576-6951595 | None:intergenic | 30.0% | |
| GCACCATAATAATAGTAACA+TGG | - | chr1.1:6953296-6953315 | MS.gene33076:intron | 30.0% | |
| GCAGGTCTAAAAACTATAAA+AGG | - | chr1.1:6954477-6954496 | MS.gene33076:CDS | 30.0% | |
| GCATCAAAATTACAAACCAA+AGG | - | chr1.1:6951385-6951404 | MS.gene33076:intron | 30.0% | |
| GGACATAGTCAAATTCAAAA+CGG | + | chr1.1:6950472-6950491 | None:intergenic | 30.0% | |
| GTGATTGAATATAACCACAT+AGG | - | chr1.1:6952217-6952236 | MS.gene33076:intron | 30.0% | |
| GTTACACGGTTTAAATATCT+TGG | - | chr1.1:6951577-6951596 | MS.gene33076:intron | 30.0% | |
| TAAATCATCGTATTCAAGCT+GGG | - | chr1.1:6951638-6951657 | MS.gene33076:intron | 30.0% | |
| TAATGCAACACGGATATATA+AGG | + | chr1.1:6954180-6954199 | None:intergenic | 30.0% | |
| TAGAAGAGTAGATCAAATAG+AGG | - | chr1.1:6951984-6952003 | MS.gene33076:CDS | 30.0% | |
| TATTTAAACCGTGTAACTTG+GGG | + | chr1.1:6951574-6951593 | None:intergenic | 30.0% | |
| TCATATAAACCATCAACTGT+TGG | + | chr1.1:6954285-6954304 | None:intergenic | 30.0% | |
| TGCAACTATCTCATTTGAAT+TGG | + | chr1.1:6953714-6953733 | None:intergenic | 30.0% | |
| TGGTATATGGGAGAATATTT+GGG | - | chr1.1:6950217-6950236 | MS.gene33076:intron | 30.0% | |
| TGTTTGATTGCTATCTATCT+AGG | - | chr1.1:6953800-6953819 | MS.gene33076:intron | 30.0% | |
| TTGATCTACTCTTCTAACAA+CGG | + | chr1.1:6951980-6951999 | None:intergenic | 30.0% | |
| TTGCATTGCATAAACAGTAA+AGG | + | chr1.1:6952994-6953013 | None:intergenic | 30.0% | |
| ! | ATTCATTTTATCTTCCAGAG+TGG | - | chr1.1:6953392-6953411 | MS.gene33076:intron | 30.0% |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | + | chr1.1:6952039-6952058 | None:intergenic | 30.0% |
| ! | TTGGATCCAAATATGGTTTT+TGG | - | chr1.1:6952087-6952106 | MS.gene33076:CDS | 30.0% |
| ! | TTTTCCTAAACAACAAATGC+TGG | - | chr1.1:6954064-6954083 | MS.gene33076:intron | 30.0% |
| !! | AATACCAGCATTTGTTGTTT+AGG | + | chr1.1:6954071-6954090 | None:intergenic | 30.0% |
| !! | AATAGTAACATGGTGTCATA+GGG | - | chr1.1:6953306-6953325 | MS.gene33076:intron | 30.0% |
| !! | TAATAGTAACATGGTGTCAT+AGG | - | chr1.1:6953305-6953324 | MS.gene33076:intron | 30.0% |
| !! | TAGAAAAGTTGGTGGAAAAT+AGG | - | chr1.1:6951914-6951933 | MS.gene33076:intron | 30.0% |
| !!! | TCATTTTTGTTATTGTGTGC+AGG | - | chr1.1:6954459-6954478 | MS.gene33076:CDS | 30.0% |
| AACTTTCCTTTCAGCTTAAG+TGG | + | chr1.1:6951712-6951731 | None:intergenic | 35.0% | |
| ACATCTTCAATCTGATGTCT+TGG | - | chr1.1:6952262-6952281 | MS.gene33076:intron | 35.0% | |
| ACCAAACATGTAATGCAACA+CGG | + | chr1.1:6954190-6954209 | None:intergenic | 35.0% | |
| ACCTATAGTAGAAAAGTTGG+TGG | - | chr1.1:6951906-6951925 | MS.gene33076:intron | 35.0% | |
| AGACTAGATAGGATAGGATT+AGG | - | chr1.1:6951851-6951870 | MS.gene33076:intron | 35.0% | |
| AGAGAAGAAGAAACTTCAGT+TGG | - | chr1.1:6950166-6950185 | MS.gene33076:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | - | chr1.1:6951903-6951922 | MS.gene33076:intron | 35.0% | |
| AGGAATGATAAGGAGATTGA+GGG | + | chr1.1:6954124-6954143 | None:intergenic | 35.0% | |
| AGTTTAGGAGAGGAATGATA+AGG | + | chr1.1:6954134-6954153 | None:intergenic | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | - | chr1.1:6951563-6951582 | MS.gene33076:intron | 35.0% | |
| ATCAATGTCAGTATCGTGTT+TGG | - | chr1.1:6952918-6952937 | MS.gene33076:intron | 35.0% | |
| ATGAAGAATCCCTACAACAA+TGG | - | chr1.1:6953341-6953360 | MS.gene33076:intron | 35.0% | |
| ATGACGCCAAAAACCATATT+TGG | + | chr1.1:6952096-6952115 | None:intergenic | 35.0% | |
| ATGATAGAAGGATTCAGGAA+GGG | - | chr1.1:6954519-6954538 | MS.gene33076:CDS | 35.0% | |
| ATGATGAGTCTTCTGGTATA+TGG | - | chr1.1:6950204-6950223 | MS.gene33076:intron | 35.0% | |
| ATGCAATGCAATGCAATTGT+AGG | - | chr1.1:6953003-6953022 | MS.gene33076:intron | 35.0% | |
| CATCAGATTGAAGATGTAGT+TGG | + | chr1.1:6952259-6952278 | None:intergenic | 35.0% | |
| CTATCTGAACAATCCATTAC+TGG | + | chr1.1:6950540-6950559 | None:intergenic | 35.0% | |
| CTGAATCCTTCTATCATCAA+TGG | + | chr1.1:6954516-6954535 | None:intergenic | 35.0% | |
| CTGGTATATGGGAGAATATT+TGG | - | chr1.1:6950216-6950235 | MS.gene33076:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | chr1.1:6951928-6951947 | MS.gene33076:intron | 35.0% | |
| GAAACAGAAACAGTAGAATC+AGG | + | chr1.1:6950272-6950291 | None:intergenic | 35.0% | |
| GACCTCTAAATCCTTTCTAA+TGG | + | chr1.1:6952061-6952080 | None:intergenic | 35.0% | |
| GAGAAGAAGAAACTTCAGTT+GGG | - | chr1.1:6950167-6950186 | MS.gene33076:intron | 35.0% | |
| GATGAGTGATAAGACTAGAT+AGG | - | chr1.1:6951840-6951859 | MS.gene33076:intron | 35.0% | |
| GCAAAAGAAATTAGGACCTT+TGG | + | chr1.1:6953127-6953146 | None:intergenic | 35.0% | |
| GGTATATGGGAGAATATTTG+GGG | - | chr1.1:6950218-6950237 | MS.gene33076:intron | 35.0% | |
| GTAAATCATCGTATTCAAGC+TGG | - | chr1.1:6951637-6951656 | MS.gene33076:intron | 35.0% | |
| GTCTTGTATGTGTCTTTCTT+TGG | - | chr1.1:6951093-6951112 | MS.gene33076:intron | 35.0% | |
| GTGATAAGACTAGATAGGAT+AGG | - | chr1.1:6951845-6951864 | MS.gene33076:intron | 35.0% | |
| TAGTAATGATGGTATCTCTG+TGG | + | chr1.1:6950055-6950074 | None:intergenic | 35.0% | |
| TCACTATGTGCTATCAAGTT+AGG | - | chr1.1:6953766-6953785 | MS.gene33076:intron | 35.0% | |
| TCAGCAGTAGAAGAAGAAAA+GGG | - | chr1.1:6950087-6950106 | MS.gene33076:CDS | 35.0% | |
| TCGATTGGTGAAACAATTCT+TGG | - | chr1.1:6950568-6950587 | MS.gene33076:intron | 35.0% | |
| TGAAGAATCCCTACAACAAT+GGG | - | chr1.1:6953342-6953361 | MS.gene33076:intron | 35.0% | |
| TGATACGTTCAGCATTAACA+TGG | - | chr1.1:6953874-6953893 | MS.gene33076:intron | 35.0% | |
| TGATGAGTCTTCTGGTATAT+GGG | - | chr1.1:6950205-6950224 | MS.gene33076:intron | 35.0% | |
| TGGTACAGTAGTAGTAATGA+TGG | + | chr1.1:6950066-6950085 | None:intergenic | 35.0% | |
| TGGTGTTTGTGTCTTTATGT+CGG | - | chr1.1:6952938-6952957 | MS.gene33076:intron | 35.0% | |
| TGTCCAAATCAAGTTCACTA+CGG | - | chr1.1:6950487-6950506 | MS.gene33076:intron | 35.0% | |
| TGTTGTAGGGATTCTTCATT+CGG | + | chr1.1:6953340-6953359 | None:intergenic | 35.0% | |
| TTAATGAGTTCCACCAGTAA+TGG | - | chr1.1:6950524-6950543 | MS.gene33076:intron | 35.0% | |
| TTCAGCAGTAGAAGAAGAAA+AGG | - | chr1.1:6950086-6950105 | MS.gene33076:CDS | 35.0% | |
| TTTCTTCTTCTACTGCTGAA+TGG | + | chr1.1:6950086-6950105 | None:intergenic | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | - | chr1.1:6951703-6951722 | MS.gene33076:intron | 35.0% |
| ! | AAGACTAGTGATTTGAGACA+AGG | + | chr1.1:6953966-6953985 | None:intergenic | 35.0% |
| ! | AGACTAGTGATTTGAGACAA+GGG | + | chr1.1:6953965-6953984 | None:intergenic | 35.0% |
| ! | CAAAGAGTGTAGTTGATGTT+GGG | - | chr1.1:6952487-6952506 | MS.gene33076:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr1.1:6952080-6952099 | MS.gene33076:CDS | 35.0% |
| ! | CATTGATGATAGAAGGATTC+AGG | - | chr1.1:6954514-6954533 | MS.gene33076:CDS | 35.0% |
| ! | TCCACCAACTTTTCTACTAT+AGG | + | chr1.1:6951910-6951929 | None:intergenic | 35.0% |
| ! | TGTTAGTATTTTGTTGAGGG+TGG | - | chr1.1:6954090-6954109 | MS.gene33076:intron | 35.0% |
| !! | ATTAGGACCTTTGGTTTGTT+AGG | + | chr1.1:6953118-6953137 | None:intergenic | 35.0% |
| !! | CTTGGTGCTACATAGAAAAA+AGG | - | chr1.1:6952280-6952299 | MS.gene33076:intron | 35.0% |
| !! | GAGTTTTATGATGAGTCTTC+TGG | - | chr1.1:6950197-6950216 | MS.gene33076:intron | 35.0% |
| !! | TCTCCGTCATTTTGTACTAT+GGG | + | chr1.1:6951604-6951623 | None:intergenic | 35.0% |
| !! | TTCTCCGTCATTTTGTACTA+TGG | + | chr1.1:6951605-6951624 | None:intergenic | 35.0% |
| !!! | CTCTGCTTCATAGGTTTTTT+TGG | + | chr1.1:6951255-6951274 | None:intergenic | 35.0% |
| AAAGCTATGAAGCAGAGACA+TGG | - | chr1.1:6951507-6951526 | MS.gene33076:CDS | 40.0% | |
| ACAACTTGCCCCAAATTTCT+TGG | + | chr1.1:6952544-6952563 | None:intergenic | 40.0% | |
| ACACCATTAGAGAAAGAGTG+GGG | - | chr1.1:6951878-6951897 | MS.gene33076:intron | 40.0% | |
| ACGTGACACTCAATATAGGA+CGG | + | chr1.1:6954001-6954020 | None:intergenic | 40.0% | |
| ACGTTCAGCATTAACATGGA+AGG | - | chr1.1:6953878-6953897 | MS.gene33076:intron | 40.0% | |
| AGATCAAATAGAGGAGAGTC+AGG | - | chr1.1:6951993-6952012 | MS.gene33076:CDS | 40.0% | |
| AGGACATCAAATCAGCAGAT+TGG | - | chr1.1:6953820-6953839 | MS.gene33076:intron | 40.0% | |
| AGGCTTTCGACATGTGATAA+TGG | + | chr1.1:6954559-6954578 | None:intergenic | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | - | chr1.1:6952009-6952028 | MS.gene33076:CDS | 40.0% | |
| AGTCGCTGTCATTATAGTCT+CGG | - | chr1.1:6951359-6951378 | MS.gene33076:intron | 40.0% | |
| ATCCTTCTCCCATTGTTGTA+GGG | + | chr1.1:6953353-6953372 | None:intergenic | 40.0% | |
| ATCGGCAATGTTGTATGGTA+CGG | - | chr1.1:6951750-6951769 | MS.gene33076:intron | 40.0% | |
| ATTAACTACCTGAAGGGACA+TGG | + | chr1.1:6953452-6953471 | None:intergenic | 40.0% | |
| CAAATCAAGTTCACTACGGT+TGG | - | chr1.1:6950491-6950510 | MS.gene33076:intron | 40.0% | |
| CAACCGTAGTGAACTTGATT+TGG | + | chr1.1:6950493-6950512 | None:intergenic | 40.0% | |
| CAGATAGACTTGAGTTCGAT+TGG | - | chr1.1:6950553-6950572 | MS.gene33076:intron | 40.0% | |
| CCAACATCAACTACACTCTT+TGG | + | chr1.1:6952489-6952508 | None:intergenic | 40.0% | |
| CGTTCAGCATTAACATGGAA+GGG | - | chr1.1:6953879-6953898 | MS.gene33076:intron | 40.0% | |
| GACACCATTAGAGAAAGAGT+GGG | - | chr1.1:6951877-6951896 | MS.gene33076:intron | 40.0% | |
| GACATTTCCTCACCCATTTA+GGG | - | chr1.1:6951468-6951487 | MS.gene33076:CDS | 40.0% | |
| GAGGAATGATAAGGAGATTG+AGG | + | chr1.1:6954125-6954144 | None:intergenic | 40.0% | |
| GATGATAGAAGGATTCAGGA+AGG | - | chr1.1:6954518-6954537 | MS.gene33076:CDS | 40.0% | |
| GCAACACGGATATATAAGGT+TGG | + | chr1.1:6954176-6954195 | None:intergenic | 40.0% | |
| GCATATGCCTAACAAACCAA+AGG | - | chr1.1:6953108-6953127 | MS.gene33076:intron | 40.0% | |
| GCTAACGTGACACTCAATAT+AGG | + | chr1.1:6954005-6954024 | None:intergenic | 40.0% | |
| GCTAGACAGTAAGAAAAGTC+TGG | + | chr1.1:6950594-6950613 | None:intergenic | 40.0% | |
| GCTCAGATGATCCATCAAAA+TGG | - | chr1.1:6952463-6952482 | MS.gene33076:intron | 40.0% | |
| GGATTTAGAGGTCAATGAGT+TGG | - | chr1.1:6952068-6952087 | MS.gene33076:CDS | 40.0% | |
| GTGAGACGGCAAAAGAAATT+AGG | + | chr1.1:6953135-6953154 | None:intergenic | 40.0% | |
| GTTGTAGGGATTCTTCATTC+GGG | + | chr1.1:6953339-6953358 | None:intergenic | 40.0% | |
| GTTTGATCTAGTGTGGTCAA+TGG | - | chr1.1:6953075-6953094 | MS.gene33076:intron | 40.0% | |
| TAGCAGAACCCATTATCGAA+GGG | - | chr1.1:6950626-6950645 | MS.gene33076:intron | 40.0% | |
| TAGCTCTTTCAGCTTGAACA+GGG | + | chr1.1:6952584-6952603 | None:intergenic | 40.0% | |
| TCCGTGTTGCATTACATGTT+TGG | - | chr1.1:6954186-6954205 | MS.gene33076:intron | 40.0% | |
| TCTGAACAATCCATTACTGG+TGG | + | chr1.1:6950537-6950556 | None:intergenic | 40.0% | |
| TGACACCATTAGAGAAAGAG+TGG | - | chr1.1:6951876-6951895 | MS.gene33076:intron | 40.0% | |
| TGACATTTCCTCACCCATTT+AGG | - | chr1.1:6951467-6951486 | MS.gene33076:CDS | 40.0% | |
| TGCGTTAACCCTTCGATAAT+GGG | + | chr1.1:6950637-6950656 | None:intergenic | 40.0% | |
| TGGTGGAAAATAGGCTTAGA+TGG | - | chr1.1:6951923-6951942 | MS.gene33076:intron | 40.0% | |
| TTACACGACATCAACCTATG+TGG | + | chr1.1:6952234-6952253 | None:intergenic | 40.0% | |
| TTAGCAGAACCCATTATCGA+AGG | - | chr1.1:6950625-6950644 | MS.gene33076:intron | 40.0% | |
| TTGACCACACTAGATCAAAC+TGG | + | chr1.1:6953075-6953094 | None:intergenic | 40.0% | |
| TTGAGTGTCACGTTAGCAAA+AGG | - | chr1.1:6954008-6954027 | MS.gene33076:intron | 40.0% | |
| TTGCGTTAACCCTTCGATAA+TGG | + | chr1.1:6950638-6950657 | None:intergenic | 40.0% | |
| TTGTAGGGATTCTTCATTCG+GGG | + | chr1.1:6953338-6953357 | None:intergenic | 40.0% | |
| ! | AAATTTGGGGCAAGTTGTGT+AGG | - | chr1.1:6952546-6952565 | MS.gene33076:intron | 40.0% |
| ! | ACGGATATATAAGGTTGGCT+TGG | + | chr1.1:6954171-6954190 | None:intergenic | 40.0% |
| ! | ACTTTTGCTTCTCTTTCGAC+TGG | - | chr1.1:6950335-6950354 | MS.gene33076:intron | 40.0% |
| ! | ATTTTGTTGAGGGTGGAGAT+CGG | - | chr1.1:6954097-6954116 | MS.gene33076:intron | 40.0% |
| ! | CCAAAGAGTGTAGTTGATGT+TGG | - | chr1.1:6952486-6952505 | MS.gene33076:intron | 40.0% |
| ! | GCTATGCCATTGATGATAGA+AGG | - | chr1.1:6954507-6954526 | MS.gene33076:CDS | 40.0% |
| ! | TGTTAGTCTCTCTGCTTCAT+AGG | + | chr1.1:6951264-6951283 | None:intergenic | 40.0% |
| ! | TTAGCTCTTTCAGCTTGAAC+AGG | + | chr1.1:6952585-6952604 | None:intergenic | 40.0% |
| ! | TTTTAGTCCCTAAATGGGTG+AGG | + | chr1.1:6951478-6951497 | None:intergenic | 40.0% |
| !! | ACACTCTTTGGCCATTTTGA+TGG | + | chr1.1:6952477-6952496 | None:intergenic | 40.0% |
| !! | ACTATTATTATGGTGCCACC+CGG | + | chr1.1:6953292-6953311 | None:intergenic | 40.0% |
| !! | AGTTTGTTGGTGAGTTAGCA+CGG | - | chr1.1:6953257-6953276 | MS.gene33076:intron | 40.0% |
| !! | ATAAGGTTGGCTTGGTAGTT+GGG | + | chr1.1:6954163-6954182 | None:intergenic | 40.0% |
| !! | TATAAGGTTGGCTTGGTAGT+TGG | + | chr1.1:6954164-6954183 | None:intergenic | 40.0% |
| !! | TGATAATGGCCAACAGTTGA+TGG | - | chr1.1:6954273-6954292 | MS.gene33076:CDS | 40.0% |
| !! | TGCTCAAGGATTAGCTGATA+AGG | - | chr1.1:6952617-6952636 | MS.gene33076:intron | 40.0% |
| !! | TTTTCATCTAAGGCCCTGTT+TGG | + | chr1.1:6950906-6950925 | None:intergenic | 40.0% |
| AATGCTGAACGTATCACTGC+TGG | + | chr1.1:6953870-6953889 | None:intergenic | 45.0% | |
| ACTTGAAACCATGTCCCTTC+AGG | - | chr1.1:6953441-6953460 | MS.gene33076:intron | 45.0% | |
| AGCTGAAAGAGCTAATGCTC+TGG | - | chr1.1:6952590-6952609 | MS.gene33076:intron | 45.0% | |
| AGGGTCATTGCGTCTATCAA+TGG | - | chr1.1:6950106-6950125 | MS.gene33076:intron | 45.0% | |
| AGGTACCTGGCCAAGAAATT+TGG | - | chr1.1:6952531-6952550 | MS.gene33076:intron | 45.0% | |
| AGTGCAGTATGCAAGTGAGA+CGG | + | chr1.1:6953149-6953168 | None:intergenic | 45.0% | |
| ATATCGGACAGCAGTCAGAT+CGG | - | chr1.1:6951732-6951751 | MS.gene33076:intron | 45.0% | |
| ATCATCGTATTCAAGCTGGG+TGG | - | chr1.1:6951641-6951660 | MS.gene33076:intron | 45.0% | |
| ATCCCTACAACAATGGGAGA+AGG | - | chr1.1:6953348-6953367 | MS.gene33076:intron | 45.0% | |
| CACCATTAGAGAAAGAGTGG+GGG | - | chr1.1:6951879-6951898 | MS.gene33076:intron | 45.0% | |
| CACTTACTTTCCTCTCGTGT+TGG | + | chr1.1:6951795-6951814 | None:intergenic | 45.0% | |
| CGAGAGGAAAGTAAGTGTAG+CGG | - | chr1.1:6951798-6951817 | MS.gene33076:intron | 45.0% | |
| CTAGAACAACCATTCCCTGA+CGG | - | chr1.1:6953049-6953068 | MS.gene33076:intron | 45.0% | |
| CTTACCACTTCGCAAGATTG+AGG | + | chr1.1:6953910-6953929 | None:intergenic | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | + | chr1.1:6951683-6951702 | None:intergenic | 45.0% | |
| CTTCTAACAACGGCATCTAC+AGG | + | chr1.1:6951970-6951989 | None:intergenic | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | - | chr1.1:6952003-6952022 | MS.gene33076:CDS | 45.0% | |
| GATCCTTCTCCCATTGTTGT+AGG | + | chr1.1:6953354-6953373 | None:intergenic | 45.0% | |
| GGCCAAAATGGAGCAACAAA+GGG | + | chr1.1:6953849-6953868 | None:intergenic | 45.0% | |
| GGGCCCATAGTACAAAATGA+CGG | - | chr1.1:6951598-6951617 | MS.gene33076:intron | 45.0% | |
| GGTACCTGGCCAAGAAATTT+GGG | - | chr1.1:6952532-6952551 | MS.gene33076:intron | 45.0% | |
| GGTTCTGCTAATCCAGAGTT+CGG | + | chr1.1:6950616-6950635 | None:intergenic | 45.0% | |
| GTACCTGGCCAAGAAATTTG+GGG | - | chr1.1:6952533-6952552 | MS.gene33076:intron | 45.0% | |
| GTCAGATCGGCAATGTTGTA+TGG | - | chr1.1:6951745-6951764 | MS.gene33076:intron | 45.0% | |
| GTCATTGCGTCTATCAATGG+CGG | - | chr1.1:6950109-6950128 | MS.gene33076:intron | 45.0% | |
| TACCCCCACTCTTTCTCTAA+TGG | + | chr1.1:6951884-6951903 | None:intergenic | 45.0% | |
| TGGCCAAAATGGAGCAACAA+AGG | + | chr1.1:6953850-6953869 | None:intergenic | 45.0% | |
| TGGGGTGATCATATGCATCA+TGG | - | chr1.1:6950236-6950255 | MS.gene33076:intron | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | - | chr1.1:6951650-6951669 | MS.gene33076:intron | 45.0% | |
| TTCACCTCAATCTTGCGAAG+TGG | - | chr1.1:6953903-6953922 | MS.gene33076:intron | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | - | chr1.1:6951664-6951683 | MS.gene33076:intron | 45.0% | |
| TTGATGTTGGGTGTGGCATA+GGG | - | chr1.1:6952499-6952518 | MS.gene33076:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr1.1:6952136-6952155 | None:intergenic | 45.0% |
| ! | AAGTAAGTGTAGCGGAGATG+AGG | - | chr1.1:6951806-6951825 | MS.gene33076:intron | 45.0% |
| ! | AGTGTAGTTGATGTTGGGTG+TGG | - | chr1.1:6952492-6952511 | MS.gene33076:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr1.1:6952137-6952156 | None:intergenic | 45.0% |
| ! | CTCCCTTTGTTGCTCCATTT+TGG | - | chr1.1:6953844-6953863 | MS.gene33076:intron | 45.0% |
| ! | GAAAGAAGCGATGGTGGTAA+TGG | - | chr1.1:6950136-6950155 | MS.gene33076:intron | 45.0% |
| ! | GTTTGTTGGTGAGTTAGCAC+GGG | - | chr1.1:6953258-6953277 | MS.gene33076:intron | 45.0% |
| ! | TAGAGCGTCAGCAACTTGAA+AGG | + | chr1.1:6953032-6953051 | None:intergenic | 45.0% |
| !!! | TCATTATTTAAAATTATTAT+TGG | - | chr1.1:6952886-6952905 | MS.gene33076:intron | 5.0% |
| ACGGCCAGTTTGATCTAGTG+TGG | - | chr1.1:6953068-6953087 | MS.gene33076:intron | 50.0% | |
| ACTAGATCAAACTGGCCGTC+AGG | + | chr1.1:6953067-6953086 | None:intergenic | 50.0% | |
| ATTGCGTCTATCAATGGCGG+CGG | - | chr1.1:6950112-6950131 | MS.gene33076:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr1.1:6952135-6952154 | MS.gene33076:intron | 50.0% | |
| CGAAAGCCTGAAAACGCAGA+GGG | - | chr1.1:6954570-6954589 | MS.gene33076:CDS | 50.0% | |
| CGTATCACTGCTGGCCAAAA+TGG | + | chr1.1:6953861-6953880 | None:intergenic | 50.0% | |
| CTAGATCAAACTGGCCGTCA+GGG | + | chr1.1:6953066-6953085 | None:intergenic | 50.0% | |
| CTAGTGTGGTCAATGGAGAG+CGG | - | chr1.1:6953082-6953101 | MS.gene33076:intron | 50.0% | |
| CTTACTGTCTAGCCGAACTC+TGG | - | chr1.1:6950601-6950620 | MS.gene33076:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr1.1:6952132-6952151 | None:intergenic | 50.0% | |
| GACGCTCGATATGTGACCAA+AGG | - | chr1.1:6954382-6954401 | MS.gene33076:CDS | 50.0% | |
| GTCTGACTGCAACGTGATAC+TGG | - | chr1.1:6952838-6952857 | MS.gene33076:intron | 50.0% | |
| GTTGATGTTGGGTGTGGCAT+AGG | - | chr1.1:6952498-6952517 | MS.gene33076:intron | 50.0% | |
| TCACTACGGTTGGACTCAAG+TGG | - | chr1.1:6950501-6950520 | MS.gene33076:intron | 50.0% | |
| TCCAACTTTCACCTCGTCGT+GGG | + | chr1.1:6951539-6951558 | None:intergenic | 50.0% | |
| TCGAAAGCCTGAAAACGCAG+AGG | - | chr1.1:6954569-6954588 | MS.gene33076:CDS | 50.0% | |
| TGAGTCTTCGAGTGTGCCTT+TGG | + | chr1.1:6951404-6951423 | None:intergenic | 50.0% | |
| TGATGTTGGGTGTGGCATAG+GGG | - | chr1.1:6952500-6952519 | MS.gene33076:intron | 50.0% | |
| TGTTGTATGGTACGGAGTGC+TGG | - | chr1.1:6951758-6951777 | MS.gene33076:intron | 50.0% | |
| TTGCCCCAAATTTCTTGGCC+AGG | + | chr1.1:6952539-6952558 | None:intergenic | 50.0% | |
| ! | ATGGTATCTCTGTGGTGCTG+AGG | + | chr1.1:6950047-6950066 | None:intergenic | 50.0% |
| ! | CATTGACCCTCTGCGTTTTC+AGG | + | chr1.1:6954579-6954598 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr1.1:6952138-6952157 | None:intergenic | 50.0% |
| ! | GTTGTATGGTACGGAGTGCT+GGG | - | chr1.1:6951759-6951778 | MS.gene33076:intron | 50.0% |
| AATGCTCTGGCTGCTGCTCA+AGG | - | chr1.1:6952603-6952622 | MS.gene33076:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr1.1:6952124-6952143 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr1.1:6952123-6952142 | MS.gene33076:intron | 55.0% | |
| CATGGACATTTCCCACGACG+AGG | - | chr1.1:6951525-6951544 | MS.gene33076:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr1.1:6952130-6952149 | MS.gene33076:intron | 55.0% | |
| CGGAGATGAGGATGTTGTGC+TGG | - | chr1.1:6951818-6951837 | MS.gene33076:intron | 55.0% | |
| CGGTTAAGAGCCAACACGAG+AGG | - | chr1.1:6951782-6951801 | MS.gene33076:intron | 55.0% | |
| CTCCAACTTTCACCTCGTCG+TGG | + | chr1.1:6951540-6951559 | None:intergenic | 55.0% | |
| GATGTTGGGTGTGGCATAGG+GGG | - | chr1.1:6952501-6952520 | MS.gene33076:intron | 55.0% | |
| GTAGTTGGGTGGGGGAGTTT+AGG | + | chr1.1:6954149-6954168 | None:intergenic | 55.0% | |
| GTGGCATAGGGGGAAGTTCA+AGG | - | chr1.1:6952511-6952530 | MS.gene33076:intron | 55.0% | |
| TCAAACTGGCCGTCAGGGAA+TGG | + | chr1.1:6953061-6953080 | None:intergenic | 55.0% | |
| TCAGCAGTTGAGCACCACTC+TGG | + | chr1.1:6953409-6953428 | None:intergenic | 55.0% | |
| TCCCACGACGAGGTGAAAGT+TGG | - | chr1.1:6951535-6951554 | MS.gene33076:CDS | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr1.1:6952124-6952143 | MS.gene33076:intron | 55.0% | |
| ! | AGGGGGAAGTTCAAGGTACC+TGG | - | chr1.1:6952518-6952537 | MS.gene33076:intron | 55.0% |
| ! | TATGTCGGTGCTTCATCGCG+TGG | - | chr1.1:6952953-6952972 | MS.gene33076:intron | 55.0% |
| !! | AGGTTGGCTTGGTAGTTGGG+TGG | + | chr1.1:6954160-6954179 | None:intergenic | 55.0% |
| !! | CGGAAGTGTCAGTGCTGCAT+AGG | + | chr1.1:6952789-6952808 | None:intergenic | 55.0% |
| !! | GGTTGGCTTGGTAGTTGGGT+GGG | + | chr1.1:6954159-6954178 | None:intergenic | 55.0% |
| !! | GTTGGCTTGGTAGTTGGGTG+GGG | + | chr1.1:6954158-6954177 | None:intergenic | 55.0% |
| !! | TTGGCTTGGTAGTTGGGTGG+GGG | + | chr1.1:6954157-6954176 | None:intergenic | 55.0% |
| GGCGGTGAAAGAAGCGATGG+TGG | - | chr1.1:6950130-6950149 | MS.gene33076:intron | 60.0% | |
| GTTAGCACGGGTAGCAGCAC+CGG | - | chr1.1:6953270-6953289 | MS.gene33076:intron | 60.0% | |
| TGGGTGGGGGAGTTTAGGAG+AGG | + | chr1.1:6954144-6954163 | None:intergenic | 60.0% | |
| TTAGCACGGGTAGCAGCACC+GGG | - | chr1.1:6953271-6953290 | MS.gene33076:intron | 60.0% | |
| !! | GTATGGTACGGAGTGCTGGG+CGG | - | chr1.1:6951762-6951781 | MS.gene33076:intron | 60.0% |
| GGCGGCGGTGAAAGAAGCGA+TGG | - | chr1.1:6950127-6950146 | MS.gene33076:intron | 65.0% | |
| ! | GCACGGGTAGCAGCACCGGG+TGG | - | chr1.1:6953274-6953293 | MS.gene33076:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 6949990 | 6954599 | 6949990 | ID=MS.gene33076 |
| chr1.1 | mRNA | 6949990 | 6954599 | 6949990 | ID=MS.gene33076.t1;Parent=MS.gene33076 |
| chr1.1 | exon | 6954233 | 6954599 | 6954233 | ID=MS.gene33076.t1.exon1;Parent=MS.gene33076.t1 |
| chr1.1 | CDS | 6954233 | 6954599 | 6954233 | ID=cds.MS.gene33076.t1;Parent=MS.gene33076.t1 |
| chr1.1 | exon | 6951951 | 6952120 | 6951951 | ID=MS.gene33076.t1.exon2;Parent=MS.gene33076.t1 |
| chr1.1 | CDS | 6951951 | 6952120 | 6951951 | ID=cds.MS.gene33076.t1;Parent=MS.gene33076.t1 |
| chr1.1 | exon | 6951460 | 6951564 | 6951460 | ID=MS.gene33076.t1.exon3;Parent=MS.gene33076.t1 |
| chr1.1 | CDS | 6951460 | 6951564 | 6951460 | ID=cds.MS.gene33076.t1;Parent=MS.gene33076.t1 |
| chr1.1 | exon | 6951127 | 6951330 | 6951127 | ID=MS.gene33076.t1.exon4;Parent=MS.gene33076.t1 |
| chr1.1 | CDS | 6951127 | 6951330 | 6951127 | ID=cds.MS.gene33076.t1;Parent=MS.gene33076.t1 |
| chr1.1 | exon | 6950665 | 6950767 | 6950665 | ID=MS.gene33076.t1.exon5;Parent=MS.gene33076.t1 |
| chr1.1 | CDS | 6950665 | 6950767 | 6950665 | ID=cds.MS.gene33076.t1;Parent=MS.gene33076.t1 |
| chr1.1 | exon | 6949990 | 6950108 | 6949990 | ID=MS.gene33076.t1.exon6;Parent=MS.gene33076.t1 |
| chr1.1 | CDS | 6949990 | 6950108 | 6949990 | ID=cds.MS.gene33076.t1;Parent=MS.gene33076.t1 |
| Gene Sequence |
| Protein sequence |
