Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33645.t1 | XP_013466442.1 | 71.1 | 467 | 28 | 3 | 1 | 366 | 1 | 461 | 4.40E-175 | 624 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33645.t1 | P56725 | 48.0 | 460 | 129 | 5 | 8 | 366 | 4 | 454 | 1.8e-108 | 394.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33645.t1 | A0A072VGD7 | 71.1 | 467 | 28 | 3 | 1 | 366 | 1 | 461 | 3.2e-175 | 624.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051960 | MS.gene33645 | 0.800995 | 1.11E-48 | -1.69E-46 |
| MS.gene052053 | MS.gene33645 | 0.817545 | 3.12E-52 | -1.69E-46 |
| MS.gene053932 | MS.gene33645 | 0.825454 | 4.65E-54 | -1.69E-46 |
| MS.gene055549 | MS.gene33645 | 0.809855 | 1.54E-50 | -1.69E-46 |
| MS.gene055550 | MS.gene33645 | 0.814239 | 1.70E-51 | -1.69E-46 |
| MS.gene056365 | MS.gene33645 | 0.827426 | 1.57E-54 | -1.69E-46 |
| MS.gene057001 | MS.gene33645 | 0.806425 | 8.28E-50 | -1.69E-46 |
| MS.gene058628 | MS.gene33645 | 0.806871 | 6.66E-50 | -1.69E-46 |
| MS.gene058630 | MS.gene33645 | 0.80259 | 5.22E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33645.t1 | MTR_1g029540 | 90.099 | 303 | 23 | 2 | 1 | 302 | 1 | 297 | 0.0 | 556 |
| MS.gene33645.t1 | MTR_1g029540 | 76.829 | 82 | 11 | 1 | 285 | 366 | 388 | 461 | 6.77e-32 | 125 |
| MS.gene33645.t1 | MTR_4g008630 | 83.775 | 302 | 47 | 1 | 1 | 302 | 1 | 300 | 5.74e-178 | 502 |
| MS.gene33645.t1 | MTR_4g008630 | 84.848 | 66 | 10 | 0 | 301 | 366 | 399 | 464 | 7.45e-30 | 119 |
| MS.gene33645.t1 | MTR_8g090095 | 60.061 | 328 | 122 | 4 | 10 | 333 | 21 | 343 | 1.89e-130 | 382 |
| MS.gene33645.t1 | MTR_8g090095 | 70.312 | 64 | 19 | 0 | 303 | 366 | 418 | 481 | 5.10e-22 | 97.4 |
| MS.gene33645.t1 | MTR_5g087620 | 26.769 | 325 | 194 | 11 | 15 | 302 | 11 | 328 | 4.61e-21 | 94.7 |
| MS.gene33645.t1 | MTR_5g464760 | 26.062 | 353 | 212 | 15 | 1 | 315 | 1 | 342 | 2.74e-20 | 92.4 |
| MS.gene33645.t1 | MTR_0036s0220 | 25.691 | 362 | 212 | 14 | 9 | 328 | 7 | 353 | 4.00e-20 | 91.7 |
| MS.gene33645.t1 | MTR_5g464810 | 26.385 | 379 | 223 | 19 | 9 | 346 | 7 | 370 | 5.47e-20 | 91.3 |
| MS.gene33645.t1 | MTR_5g064240 | 26.385 | 379 | 223 | 19 | 9 | 346 | 7 | 370 | 5.47e-20 | 91.3 |
| MS.gene33645.t1 | MTR_3g079480 | 21.944 | 360 | 226 | 13 | 15 | 335 | 22 | 365 | 6.94e-18 | 85.1 |
| MS.gene33645.t1 | MTR_2g008210 | 25.936 | 374 | 218 | 18 | 16 | 344 | 13 | 372 | 1.00e-17 | 84.7 |
| MS.gene33645.t1 | MTR_8g009063 | 25.460 | 326 | 196 | 11 | 4 | 302 | 2 | 307 | 1.67e-17 | 84.0 |
| MS.gene33645.t1 | MTR_3g479470 | 24.706 | 340 | 202 | 13 | 15 | 313 | 14 | 340 | 2.37e-17 | 83.6 |
| MS.gene33645.t1 | MTR_6g033675 | 25.926 | 324 | 184 | 14 | 15 | 302 | 5 | 308 | 3.27e-17 | 83.2 |
| MS.gene33645.t1 | MTR_8g009055 | 28.992 | 238 | 144 | 8 | 85 | 302 | 68 | 300 | 4.44e-17 | 82.8 |
| MS.gene33645.t1 | MTR_8g009073 | 29.630 | 216 | 135 | 7 | 98 | 302 | 91 | 300 | 8.33e-17 | 82.0 |
| MS.gene33645.t1 | MTR_0288s0020 | 25.740 | 338 | 205 | 16 | 15 | 320 | 11 | 334 | 9.56e-17 | 81.6 |
| MS.gene33645.t1 | MTR_7g067120 | 27.119 | 295 | 188 | 11 | 15 | 302 | 10 | 284 | 2.47e-16 | 80.5 |
| MS.gene33645.t1 | MTR_3g479520 | 23.030 | 330 | 198 | 12 | 16 | 302 | 17 | 333 | 2.48e-16 | 80.5 |
| MS.gene33645.t1 | MTR_3g479490 | 21.944 | 360 | 224 | 12 | 16 | 335 | 8 | 350 | 2.94e-16 | 80.1 |
| MS.gene33645.t1 | MTR_7g070800 | 26.994 | 326 | 188 | 13 | 10 | 302 | 2 | 310 | 4.97e-16 | 79.7 |
| MS.gene33645.t1 | MTR_8g009073 | 29.714 | 175 | 112 | 4 | 135 | 302 | 1 | 171 | 6.87e-16 | 78.2 |
| MS.gene33645.t1 | MTR_8g027870 | 26.537 | 309 | 187 | 15 | 14 | 302 | 18 | 306 | 1.70e-15 | 77.8 |
| MS.gene33645.t1 | MTR_7g071040 | 26.284 | 331 | 190 | 12 | 9 | 302 | 12 | 325 | 1.71e-15 | 78.2 |
| MS.gene33645.t1 | MTR_3g008010 | 24.128 | 344 | 204 | 16 | 16 | 316 | 12 | 341 | 2.14e-15 | 77.8 |
| MS.gene33645.t1 | MTR_5g035560 | 24.000 | 325 | 185 | 14 | 11 | 302 | 8 | 303 | 2.17e-15 | 77.8 |
| MS.gene33645.t1 | MTR_8g009050 | 28.033 | 239 | 145 | 8 | 85 | 302 | 68 | 300 | 2.34e-15 | 77.4 |
| MS.gene33645.t1 | MTR_4g094220 | 24.112 | 394 | 232 | 16 | 15 | 363 | 8 | 379 | 3.31e-15 | 77.0 |
| MS.gene33645.t1 | MTR_6g013440 | 23.810 | 336 | 191 | 13 | 16 | 302 | 13 | 332 | 3.82e-15 | 77.0 |
| MS.gene33645.t1 | MTR_8g071070 | 26.606 | 327 | 194 | 14 | 7 | 302 | 2 | 313 | 4.38e-15 | 76.6 |
| MS.gene33645.t1 | MTR_0009s0240 | 26.087 | 322 | 192 | 15 | 7 | 302 | 2 | 303 | 5.03e-15 | 76.6 |
| MS.gene33645.t1 | MTR_4g485630 | 25.938 | 320 | 202 | 12 | 7 | 302 | 2 | 310 | 5.22e-15 | 76.6 |
| MS.gene33645.t1 | MTR_5g035580 | 23.939 | 330 | 189 | 14 | 6 | 302 | 5 | 305 | 5.60e-15 | 76.3 |
| MS.gene33645.t1 | MTR_7g055710 | 24.922 | 321 | 206 | 12 | 9 | 302 | 6 | 318 | 1.11e-14 | 75.5 |
| MS.gene33645.t1 | MTR_7g067330 | 25.974 | 308 | 175 | 12 | 15 | 302 | 10 | 284 | 1.27e-14 | 75.1 |
| MS.gene33645.t1 | MTR_8g008990 | 27.311 | 238 | 148 | 7 | 85 | 302 | 68 | 300 | 1.41e-14 | 75.1 |
| MS.gene33645.t1 | MTR_4g082820 | 25.526 | 380 | 238 | 11 | 9 | 363 | 2 | 361 | 1.73e-14 | 74.7 |
| MS.gene33645.t1 | MTR_7g070860 | 26.543 | 324 | 188 | 13 | 12 | 302 | 5 | 311 | 2.52e-14 | 74.3 |
| MS.gene33645.t1 | MTR_8g027885 | 25.974 | 308 | 190 | 13 | 14 | 302 | 18 | 306 | 2.82e-14 | 74.3 |
| MS.gene33645.t1 | MTR_0184s0040 | 22.727 | 330 | 210 | 10 | 15 | 318 | 22 | 332 | 3.34e-14 | 73.9 |
| MS.gene33645.t1 | MTR_0078s0190 | 22.727 | 330 | 210 | 10 | 15 | 318 | 22 | 332 | 3.34e-14 | 73.9 |
| MS.gene33645.t1 | MTR_7g117170 | 25.466 | 322 | 190 | 13 | 9 | 302 | 10 | 309 | 3.38e-14 | 73.9 |
| MS.gene33645.t1 | MTR_7g070660 | 24.691 | 324 | 198 | 13 | 9 | 302 | 6 | 313 | 3.92e-14 | 73.9 |
| MS.gene33645.t1 | MTR_1g019510 | 28.025 | 314 | 178 | 16 | 15 | 302 | 7 | 298 | 5.87e-14 | 73.2 |
| MS.gene33645.t1 | MTR_7g047030 | 25.000 | 252 | 153 | 10 | 79 | 302 | 58 | 301 | 8.55e-14 | 72.8 |
| MS.gene33645.t1 | MTR_7g047270 | 25.000 | 252 | 153 | 10 | 79 | 302 | 58 | 301 | 8.55e-14 | 72.8 |
| MS.gene33645.t1 | MTR_8g009067 | 27.315 | 216 | 140 | 7 | 98 | 302 | 91 | 300 | 8.57e-14 | 72.8 |
| MS.gene33645.t1 | MTR_7g070910 | 24.545 | 330 | 197 | 9 | 9 | 302 | 6 | 319 | 8.77e-14 | 72.8 |
| MS.gene33645.t1 | MTR_7g070740 | 24.308 | 325 | 203 | 13 | 9 | 302 | 6 | 318 | 2.46e-13 | 71.2 |
| MS.gene33645.t1 | MTR_1g090270 | 23.604 | 394 | 225 | 15 | 2 | 353 | 3 | 362 | 2.89e-13 | 71.2 |
| MS.gene33645.t1 | MTR_0078s0010 | 23.396 | 265 | 175 | 9 | 79 | 319 | 58 | 318 | 3.01e-13 | 71.2 |
| MS.gene33645.t1 | MTR_8g008970 | 28.372 | 215 | 139 | 8 | 98 | 302 | 91 | 300 | 3.12e-13 | 71.6 |
| MS.gene33645.t1 | MTR_6g038230 | 23.476 | 328 | 198 | 12 | 6 | 302 | 2 | 307 | 3.34e-13 | 70.9 |
| MS.gene33645.t1 | MTR_6g033725 | 24.289 | 387 | 222 | 16 | 15 | 363 | 5 | 358 | 3.50e-13 | 70.9 |
| MS.gene33645.t1 | MTR_8g006220 | 23.567 | 314 | 202 | 12 | 10 | 302 | 2 | 298 | 3.68e-13 | 70.9 |
| MS.gene33645.t1 | MTR_8g009067 | 34.074 | 135 | 82 | 4 | 170 | 302 | 53 | 182 | 3.76e-13 | 70.1 |
| MS.gene33645.t1 | MTR_6g014040 | 22.356 | 331 | 203 | 14 | 16 | 302 | 12 | 332 | 4.17e-13 | 70.9 |
| MS.gene33645.t1 | MTR_8g066610 | 23.100 | 329 | 202 | 10 | 11 | 302 | 6 | 320 | 6.31e-13 | 70.1 |
| MS.gene33645.t1 | MTR_8g006270 | 22.179 | 257 | 170 | 6 | 77 | 313 | 62 | 308 | 8.29e-13 | 69.7 |
| MS.gene33645.t1 | MTR_8g465670 | 22.857 | 315 | 203 | 11 | 10 | 302 | 3 | 299 | 8.55e-13 | 69.7 |
| MS.gene33645.t1 | MTR_2g098430 | 25.633 | 316 | 195 | 15 | 15 | 302 | 7 | 310 | 9.08e-13 | 69.7 |
| MS.gene33645.t1 | MTR_4g082810 | 31.481 | 162 | 100 | 6 | 206 | 363 | 209 | 363 | 1.24e-12 | 68.9 |
| MS.gene33645.t1 | MTR_8g006260 | 27.358 | 212 | 126 | 8 | 113 | 302 | 99 | 304 | 1.37e-12 | 68.9 |
| MS.gene33645.t1 | MTR_0078s0060 | 23.636 | 330 | 204 | 12 | 15 | 317 | 7 | 315 | 1.54e-12 | 68.9 |
| MS.gene33645.t1 | MTR_5g031830 | 24.450 | 409 | 218 | 17 | 6 | 363 | 4 | 372 | 3.53e-12 | 67.8 |
| MS.gene33645.t1 | MTR_7g011470 | 25.545 | 321 | 190 | 13 | 16 | 302 | 12 | 317 | 3.80e-12 | 67.8 |
| MS.gene33645.t1 | MTR_8g064880 | 22.840 | 324 | 208 | 11 | 9 | 302 | 4 | 315 | 3.88e-12 | 67.8 |
| MS.gene33645.t1 | MTR_6g013920 | 24.850 | 334 | 189 | 14 | 16 | 302 | 12 | 330 | 3.98e-12 | 67.8 |
| MS.gene33645.t1 | MTR_8g074550 | 21.751 | 377 | 227 | 13 | 15 | 356 | 9 | 352 | 4.02e-12 | 67.8 |
| MS.gene33645.t1 | MTR_3g069710 | 23.659 | 317 | 185 | 10 | 15 | 302 | 13 | 301 | 4.12e-12 | 67.4 |
| MS.gene33645.t1 | MTR_5g016480 | 21.846 | 325 | 212 | 9 | 9 | 302 | 3 | 316 | 4.62e-12 | 67.4 |
| MS.gene33645.t1 | MTR_6g033660 | 24.062 | 320 | 194 | 13 | 15 | 302 | 5 | 307 | 6.42e-12 | 67.0 |
| MS.gene33645.t1 | MTR_4g485620 | 32.353 | 102 | 62 | 2 | 207 | 302 | 197 | 297 | 8.17e-12 | 66.6 |
| MS.gene33645.t1 | MTR_6g033625 | 24.695 | 328 | 183 | 15 | 15 | 302 | 5 | 308 | 8.72e-12 | 66.6 |
| MS.gene33645.t1 | MTR_7g011470 | 24.522 | 314 | 198 | 12 | 16 | 302 | 12 | 313 | 1.77e-11 | 65.5 |
| MS.gene33645.t1 | MTR_4g117960 | 23.899 | 318 | 188 | 11 | 17 | 302 | 14 | 309 | 1.90e-11 | 65.5 |
| MS.gene33645.t1 | MTR_6g023665 | 21.581 | 329 | 205 | 10 | 3 | 302 | 2 | 306 | 2.18e-11 | 65.5 |
| MS.gene33645.t1 | MTR_6g014310 | 21.937 | 351 | 219 | 13 | 16 | 320 | 13 | 354 | 2.34e-11 | 65.5 |
| MS.gene33645.t1 | MTR_4g485590 | 32.039 | 103 | 62 | 2 | 207 | 302 | 189 | 290 | 2.52e-11 | 65.1 |
| MS.gene33645.t1 | MTR_4g485640 | 33.333 | 120 | 67 | 5 | 191 | 302 | 386 | 500 | 2.65e-11 | 65.5 |
| MS.gene33645.t1 | MTR_7g102520 | 24.925 | 333 | 204 | 13 | 4 | 302 | 2 | 322 | 2.89e-11 | 65.1 |
| MS.gene33645.t1 | MTR_0536s0020 | 31.496 | 127 | 78 | 3 | 184 | 302 | 183 | 308 | 3.22e-11 | 64.7 |
| MS.gene33645.t1 | MTR_4g117890 | 29.134 | 127 | 81 | 3 | 184 | 302 | 178 | 303 | 3.46e-11 | 64.7 |
| MS.gene33645.t1 | MTR_1g107285 | 22.393 | 326 | 205 | 10 | 10 | 302 | 4 | 314 | 4.01e-11 | 64.7 |
| MS.gene33645.t1 | MTR_7g070940 | 31.250 | 160 | 104 | 4 | 175 | 329 | 177 | 335 | 4.28e-11 | 64.3 |
| MS.gene33645.t1 | MTR_7g070780 | 24.294 | 354 | 223 | 15 | 9 | 334 | 6 | 342 | 5.90e-11 | 63.9 |
| MS.gene33645.t1 | MTR_8g006230 | 28.934 | 197 | 116 | 8 | 125 | 302 | 51 | 242 | 6.42e-11 | 62.8 |
| MS.gene33645.t1 | MTR_0078s0200 | 30.201 | 149 | 96 | 4 | 156 | 302 | 160 | 302 | 6.94e-11 | 63.2 |
| MS.gene33645.t1 | MTR_8g012745 | 31.193 | 109 | 71 | 3 | 196 | 302 | 197 | 303 | 8.03e-11 | 63.5 |
| MS.gene33645.t1 | MTR_2g046750 | 24.595 | 309 | 201 | 10 | 15 | 302 | 6 | 303 | 9.18e-11 | 63.5 |
| MS.gene33645.t1 | MTR_6g488280 | 23.659 | 317 | 199 | 13 | 10 | 302 | 2 | 299 | 9.57e-11 | 63.5 |
| MS.gene33645.t1 | MTR_0428s0010 | 23.659 | 317 | 199 | 13 | 10 | 302 | 2 | 299 | 9.57e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33645.t1 | AT5G03490 | 26.198 | 313 | 190 | 13 | 15 | 302 | 20 | 316 | 1.05e-17 | 84.7 |
| MS.gene33645.t1 | AT1G22370 | 25.148 | 338 | 203 | 15 | 15 | 316 | 14 | 337 | 1.66e-17 | 84.0 |
| MS.gene33645.t1 | AT1G73880 | 26.364 | 330 | 199 | 12 | 1 | 302 | 1 | 314 | 1.92e-17 | 84.0 |
| MS.gene33645.t1 | AT1G51210 | 25.484 | 310 | 191 | 15 | 15 | 302 | 21 | 312 | 5.50e-17 | 82.4 |
| MS.gene33645.t1 | AT2G36780 | 25.237 | 317 | 197 | 13 | 16 | 302 | 16 | 322 | 2.35e-16 | 80.5 |
| MS.gene33645.t1 | AT1G10400 | 24.688 | 320 | 202 | 14 | 12 | 302 | 5 | 314 | 2.79e-16 | 80.5 |
| MS.gene33645.t1 | AT4G15490 | 24.606 | 317 | 199 | 9 | 15 | 302 | 9 | 314 | 3.63e-16 | 80.1 |
| MS.gene33645.t1 | AT2G36770 | 24.695 | 328 | 204 | 15 | 16 | 310 | 16 | 333 | 5.82e-16 | 79.3 |
| MS.gene33645.t1 | AT1G22360 | 21.037 | 328 | 209 | 12 | 15 | 302 | 11 | 328 | 3.79e-15 | 77.0 |
| MS.gene33645.t1 | AT1G22360 | 21.037 | 328 | 209 | 12 | 15 | 302 | 11 | 328 | 3.96e-15 | 77.0 |
| MS.gene33645.t1 | AT2G36750 | 24.233 | 326 | 209 | 11 | 16 | 311 | 12 | 329 | 4.65e-15 | 76.6 |
| MS.gene33645.t1 | AT3G16520 | 26.059 | 307 | 200 | 9 | 15 | 302 | 6 | 304 | 7.30e-15 | 75.9 |
| MS.gene33645.t1 | AT3G16520 | 26.059 | 307 | 200 | 9 | 15 | 302 | 6 | 304 | 9.05e-15 | 75.9 |
| MS.gene33645.t1 | AT3G16520 | 26.059 | 307 | 200 | 9 | 15 | 302 | 6 | 304 | 9.16e-15 | 75.9 |
| MS.gene33645.t1 | AT3G53160 | 26.911 | 327 | 198 | 13 | 16 | 310 | 10 | 327 | 2.18e-14 | 74.7 |
| MS.gene33645.t1 | AT2G36800 | 23.853 | 327 | 211 | 13 | 16 | 311 | 14 | 333 | 3.86e-14 | 73.9 |
| MS.gene33645.t1 | AT1G22400 | 23.099 | 355 | 220 | 12 | 15 | 328 | 14 | 356 | 4.03e-14 | 73.9 |
| MS.gene33645.t1 | AT2G16890 | 22.074 | 376 | 241 | 14 | 15 | 363 | 10 | 360 | 1.08e-13 | 72.4 |
| MS.gene33645.t1 | AT2G31750 | 23.750 | 320 | 198 | 12 | 10 | 302 | 4 | 304 | 1.25e-13 | 72.4 |
| MS.gene33645.t1 | AT2G16890 | 22.074 | 376 | 241 | 14 | 15 | 363 | 10 | 360 | 1.36e-13 | 72.4 |
| MS.gene33645.t1 | AT2G31750 | 23.750 | 320 | 198 | 12 | 10 | 302 | 4 | 304 | 1.74e-13 | 72.0 |
| MS.gene33645.t1 | AT2G15490 | 25.072 | 347 | 224 | 12 | 9 | 325 | 2 | 342 | 2.72e-13 | 71.2 |
| MS.gene33645.t1 | AT2G30150 | 25.723 | 311 | 188 | 14 | 15 | 302 | 14 | 304 | 4.62e-13 | 70.5 |
| MS.gene33645.t1 | AT4G34138 | 22.397 | 317 | 211 | 8 | 15 | 302 | 12 | 322 | 4.85e-13 | 70.5 |
| MS.gene33645.t1 | AT2G15490 | 25.617 | 324 | 205 | 12 | 9 | 302 | 2 | 319 | 5.43e-13 | 70.5 |
| MS.gene33645.t1 | AT3G21800 | 23.824 | 319 | 202 | 11 | 11 | 302 | 2 | 306 | 7.64e-13 | 70.1 |
| MS.gene33645.t1 | AT3G02100 | 23.373 | 338 | 216 | 14 | 15 | 321 | 14 | 339 | 7.95e-13 | 69.7 |
| MS.gene33645.t1 | AT1G78270 | 22.917 | 336 | 219 | 10 | 1 | 302 | 1 | 330 | 1.35e-12 | 69.3 |
| MS.gene33645.t1 | AT1G22380 | 22.866 | 328 | 203 | 14 | 15 | 302 | 14 | 331 | 1.39e-12 | 69.3 |
| MS.gene33645.t1 | AT2G30150 | 25.649 | 308 | 186 | 14 | 18 | 302 | 1 | 288 | 2.79e-12 | 68.2 |
| MS.gene33645.t1 | AT4G34131 | 34.211 | 114 | 67 | 2 | 196 | 302 | 210 | 322 | 3.39e-12 | 67.8 |
| MS.gene33645.t1 | AT2G30140 | 23.625 | 309 | 195 | 12 | 15 | 302 | 14 | 302 | 3.74e-12 | 67.8 |
| MS.gene33645.t1 | AT2G36760 | 24.540 | 326 | 207 | 12 | 16 | 310 | 16 | 333 | 3.84e-12 | 67.8 |
| MS.gene33645.t1 | AT2G30140 | 23.548 | 310 | 195 | 12 | 15 | 302 | 14 | 303 | 5.38e-12 | 67.4 |
| MS.gene33645.t1 | AT4G34135 | 34.951 | 103 | 59 | 2 | 207 | 302 | 222 | 323 | 8.76e-12 | 65.9 |
| MS.gene33645.t1 | AT3G11340 | 25.298 | 336 | 207 | 14 | 14 | 329 | 9 | 320 | 1.11e-11 | 66.2 |
| MS.gene33645.t1 | AT4G34135 | 34.211 | 114 | 67 | 2 | 196 | 302 | 211 | 323 | 1.80e-11 | 65.9 |
| MS.gene33645.t1 | AT2G15480 | 22.812 | 320 | 213 | 10 | 12 | 302 | 8 | 322 | 3.03e-11 | 65.1 |
| MS.gene33645.t1 | AT2G15480 | 22.812 | 320 | 213 | 10 | 12 | 302 | 8 | 322 | 3.89e-11 | 64.7 |
| MS.gene33645.t1 | AT1G01390 | 24.471 | 331 | 194 | 14 | 15 | 314 | 26 | 331 | 4.68e-11 | 64.3 |
| MS.gene33645.t1 | AT1G01390 | 24.471 | 331 | 194 | 14 | 15 | 314 | 9 | 314 | 5.35e-11 | 64.3 |
| MS.gene33645.t1 | AT4G01070 | 34.694 | 98 | 60 | 2 | 207 | 302 | 207 | 302 | 7.31e-11 | 63.2 |
| MS.gene33645.t1 | AT3G46660 | 22.830 | 311 | 197 | 9 | 15 | 302 | 15 | 305 | 7.83e-11 | 63.5 |
| MS.gene33645.t1 | AT5G14860 | 22.829 | 403 | 212 | 17 | 16 | 363 | 10 | 368 | 9.26e-11 | 63.5 |
Find 87 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGCAAGATAAAGTTTATT+TGG | 0.105578 | 1.1:+15067331 | MS.gene33645:CDS |
| TATCATTGATGTTCCTTCTA+TGG | 0.222334 | 1.1:+15066981 | MS.gene33645:CDS |
| CAAATTGAACAGATTGGAAT+TGG | 0.238242 | 1.1:+15067300 | MS.gene33645:CDS |
| GGAAATTTAGTTTCTGCATT+TGG | 0.256117 | 1.1:-15066712 | None:intergenic |
| TTTGAGATTGAAATGGAGTT+TGG | 0.282536 | 1.1:-15066637 | None:intergenic |
| TTCAATTTGTTCCTCTGTTA+AGG | 0.290989 | 1.1:-15067286 | None:intergenic |
| TCAGTTATATATGTATCTTT+TGG | 0.319665 | 1.1:+15067252 | MS.gene33645:CDS |
| CTCTTCCATTTGGGAGAGAA+TGG | 0.326959 | 1.1:+15066933 | MS.gene33645:CDS |
| GAACTTCGAAGTGATGAAAA+TGG | 0.335131 | 1.1:-15066663 | None:intergenic |
| AACTAAATTTCCTTCTCATA+TGG | 0.340746 | 1.1:+15066723 | MS.gene33645:CDS |
| AAGCAAGATAAAGTTTATTT+GGG | 0.345910 | 1.1:+15067332 | MS.gene33645:CDS |
| TGTAATTCATGACACATATA+TGG | 0.368834 | 1.1:+15066831 | MS.gene33645:CDS |
| TTGGGCTAAAAGACATGAAT+TGG | 0.369394 | 1.1:+15067656 | MS.gene33645:CDS |
| GAAATTTAGTTTCTGCATTT+GGG | 0.369585 | 1.1:-15066711 | None:intergenic |
| TTCTTCCCCTCAATGCTTAG+AGG | 0.377825 | 1.1:-15067174 | None:intergenic |
| GTGAAGCATCCTTCCATAGA+AGG | 0.378318 | 1.1:-15066994 | None:intergenic |
| CCATCATGAAATCAACGAAT+TGG | 0.384808 | 1.1:-15067020 | None:intergenic |
| TTCTCTATCAACTCCAAGTA+AGG | 0.388992 | 1.1:-15067108 | None:intergenic |
| CTCAATGCTTAGAGGGTTGA+AGG | 0.389883 | 1.1:-15067166 | None:intergenic |
| TGGAGTTTCTCGTATGGAAA+TGG | 0.396766 | 1.1:+15067797 | MS.gene33645:CDS |
| TTAGTTTCTGCATTTGGGTT+GGG | 0.406447 | 1.1:-15066706 | None:intergenic |
| ATATTGAGAATGTTGTTAGA+AGG | 0.414109 | 1.1:+15067691 | MS.gene33645:CDS |
| TTTGGAATTGCTTTGGCCAT+TGG | 0.414251 | 1.1:-15066455 | None:intergenic |
| ATGATATGCGAGCTTTCAAT+TGG | 0.416204 | 1.1:-15066964 | None:intergenic |
| GAATGTTGTTAGAAGGTTGA+TGG | 0.422088 | 1.1:+15067698 | MS.gene33645:CDS |
| ATGGATGTTTGAGATTGAAA+TGG | 0.424877 | 1.1:-15066644 | None:intergenic |
| TGATTCAAATGGCCTTGTGC+TGG | 0.429358 | 1.1:-15066508 | None:intergenic |
| TCTGCATTTGGGTTGGGAGG+AGG | 0.435083 | 1.1:-15066700 | None:intergenic |
| TGATTTCATGATGGCTCAAA+AGG | 0.437813 | 1.1:+15067029 | MS.gene33645:CDS |
| GAGGAACAAATTGAACAGAT+TGG | 0.442205 | 1.1:+15067294 | MS.gene33645:CDS |
| AAACCAAGTGGTGATTGTTA+TGG | 0.444236 | 1.1:+15066477 | MS.gene33645:CDS |
| AACATACCTGTCCATTATGT+TGG | 0.450291 | 1.1:+15066565 | MS.gene33645:CDS |
| TACAATTCGTGGCCAAGGTT+CGG | 0.451038 | 1.1:+15066612 | MS.gene33645:CDS |
| AAATGTTGTTGGTACATCAA+TGG | 0.455302 | 1.1:+15067767 | MS.gene33645:CDS |
| CAATAAGAAGCATTGGGCAG+TGG | 0.463600 | 1.1:+15067140 | MS.gene33645:CDS |
| CCAATTCGTTGATTTCATGA+TGG | 0.465832 | 1.1:+15067020 | MS.gene33645:CDS |
| AATTCTGTGAATTCAGTAAT+GGG | 0.469253 | 1.1:+15067052 | MS.gene33645:CDS |
| GTATAGAAGTCCCAACATAA+TGG | 0.469536 | 1.1:-15066576 | None:intergenic |
| AAATTGAACAGATTGGAATT+GGG | 0.470378 | 1.1:+15067301 | MS.gene33645:CDS |
| TTTAGTTTCTGCATTTGGGT+TGG | 0.476626 | 1.1:-15066707 | None:intergenic |
| TCTTCCATTTGGGAGAGAAT+GGG | 0.477851 | 1.1:+15066934 | MS.gene33645:CDS |
| TCACTTGCAATAAGAAGCAT+TGG | 0.483024 | 1.1:+15067133 | MS.gene33645:CDS |
| ACATACCTGTCCATTATGTT+GGG | 0.490823 | 1.1:+15066566 | MS.gene33645:CDS |
| TCTTCCCCTCAATGCTTAGA+GGG | 0.494369 | 1.1:-15067173 | None:intergenic |
| GGTGTAGAAGCTGATTCAAA+TGG | 0.504630 | 1.1:-15066519 | None:intergenic |
| AGTAATCGAAGGTCCTTACT+TGG | 0.505818 | 1.1:+15067095 | MS.gene33645:CDS |
| TTCAACCCTCTAAGCATTGA+GGG | 0.512374 | 1.1:+15067168 | MS.gene33645:CDS |
| GTTTCTGCATTTGGGTTGGG+AGG | 0.514821 | 1.1:-15066703 | None:intergenic |
| TGGAGTTTGGATCCGAACCT+TGG | 0.531258 | 1.1:-15066624 | None:intergenic |
| AATCGTCAAGCTACAATTCG+TGG | 0.533085 | 1.1:+15066601 | MS.gene33645:CDS |
| GATTCAAATGGCCTTGTGCT+GGG | 0.534487 | 1.1:-15066507 | None:intergenic |
| GAATTCTGTGAATTCAGTAA+TGG | 0.537692 | 1.1:+15067051 | MS.gene33645:CDS |
| CTTCAACCCTCTAAGCATTG+AGG | 0.541335 | 1.1:+15067167 | MS.gene33645:CDS |
| ATTGATGTTCCTTCTATGGA+AGG | 0.543815 | 1.1:+15066985 | MS.gene33645:CDS |
| TGAAGGTGGAGTTTCTCGTA+TGG | 0.545785 | 1.1:+15067791 | MS.gene33645:CDS |
| AATAAGAAGCATTGGGCAGT+GGG | 0.548637 | 1.1:+15067141 | MS.gene33645:CDS |
| TGTAAAGAGGCTTCAAAAGA+CGG | 0.554973 | 1.1:-15066748 | None:intergenic |
| GAAGTCCCAACATAATGGAC+AGG | 0.557790 | 1.1:-15066571 | None:intergenic |
| TTGGGAGGAGGTGAAACAAA+GGG | 0.558343 | 1.1:-15066688 | None:intergenic |
| GTTGGGAGGAGGTGAAACAA+AGG | 0.560569 | 1.1:-15066689 | None:intergenic |
| CAAGCTACAATTCGTGGCCA+AGG | 0.562846 | 1.1:+15066607 | MS.gene33645:CDS |
| AAATGGCCTTGTGCTGGGAA+AGG | 0.563121 | 1.1:-15066502 | None:intergenic |
| CACTTGCAATAAGAAGCATT+GGG | 0.563763 | 1.1:+15067134 | MS.gene33645:CDS |
| GATTGCATGAGTTCCGCCAC+AGG | 0.565307 | 1.1:-15066781 | None:intergenic |
| TGAGGGGAAGAAAGATTCAA+AGG | 0.569825 | 1.1:+15067185 | MS.gene33645:CDS |
| ACATCTTCGCGAGCCTGTGG+CGG | 0.571072 | 1.1:+15066768 | MS.gene33645:CDS |
| GAGGGGAAGAAAGATTCAAA+GGG | 0.594780 | 1.1:+15067186 | MS.gene33645:CDS |
| ATGGTACCTTTCCCAGCACA+AGG | 0.595372 | 1.1:+15066496 | MS.gene33645:CDS |
| GTAGACACTCATGCATGGAA+TGG | 0.601343 | 1.1:+15067208 | MS.gene33645:CDS |
| AAAGGGTAGACACTCATGCA+TGG | 0.602471 | 1.1:+15067203 | MS.gene33645:CDS |
| TTTACATCTTCGCGAGCCTG+TGG | 0.604307 | 1.1:+15066765 | MS.gene33645:CDS |
| AATTAACTAATGGCTTCCAA+TGG | 0.610239 | 1.1:+15066439 | None:intergenic |
| AAAGACGGAACCATATGAGA+AGG | 0.610573 | 1.1:-15066733 | None:intergenic |
| TCAATGCTTAGAGGGTTGAA+GGG | 0.622576 | 1.1:-15067165 | None:intergenic |
| GTACCATAACAATCACCACT+TGG | 0.627734 | 1.1:-15066480 | None:intergenic |
| AGGCTCGCGAAGATGTAAAG+AGG | 0.628262 | 1.1:-15066761 | None:intergenic |
| TGACACATATATGGCATCAG+TGG | 0.637244 | 1.1:+15066840 | MS.gene33645:CDS |
| GTTGGTACATCAATGGATGA+AGG | 0.642869 | 1.1:+15067774 | MS.gene33645:CDS |
| TAGAAGGTTGATGGAGACAA+CGG | 0.673981 | 1.1:+15067707 | MS.gene33645:CDS |
| GTGATAAGATTAAGCGTGAG+AGG | 0.673993 | 1.1:-15066540 | None:intergenic |
| AATACAAGCAGAGTAATCGA+AGG | 0.676316 | 1.1:+15067084 | MS.gene33645:CDS |
| AGGTTGATGGAGACAACGGA+AGG | 0.677835 | 1.1:+15067711 | MS.gene33645:CDS |
| TCAACCCTCTAAGCATTGAG+GGG | 0.679812 | 1.1:+15067169 | MS.gene33645:CDS |
| AACAACAACAACCTTAACAG+AGG | 0.688264 | 1.1:+15067275 | MS.gene33645:CDS |
| GGTACATCAATGGATGAAGG+TGG | 0.705634 | 1.1:+15067777 | MS.gene33645:CDS |
| ATAAGAAGCATTGGGCAGTG+GGG | 0.729612 | 1.1:+15067142 | MS.gene33645:CDS |
| GGAGGAGGTGAAACAAAGGG+AGG | 0.746890 | 1.1:-15066685 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGCAAGATAAAGTTTATT+TGG | + | chr1.1:15067331-15067350 | MS.gene33645:CDS | 20.0% |
| !! | AAGCAAGATAAAGTTTATTT+GGG | + | chr1.1:15067332-15067351 | MS.gene33645:CDS | 20.0% |
| !! | ACAAAACTTAAAAATGTTGT+TGG | + | chr1.1:15067756-15067775 | MS.gene33645:CDS | 20.0% |
| !! | ACATCTTTGATAAAAATGAA+GGG | + | chr1.1:15067379-15067398 | MS.gene33645:intron | 20.0% |
| !!! | TCAGTTATATATGTATCTTT+TGG | + | chr1.1:15067252-15067271 | MS.gene33645:CDS | 20.0% |
| ! | AAATTGAACAGATTGGAATT+GGG | + | chr1.1:15067301-15067320 | MS.gene33645:CDS | 25.0% |
| ! | AACTAAATTTCCTTCTCATA+TGG | + | chr1.1:15066723-15066742 | MS.gene33645:CDS | 25.0% |
| ! | AATTCTGTGAATTCAGTAAT+GGG | + | chr1.1:15067052-15067071 | MS.gene33645:CDS | 25.0% |
| ! | ATAACACAAGTGTTAAAGAT+TGG | + | chr1.1:15067618-15067637 | MS.gene33645:intron | 25.0% |
| ! | ATATTGAGAATGTTGTTAGA+AGG | + | chr1.1:15067691-15067710 | MS.gene33645:CDS | 25.0% |
| ! | GACATCTTTGATAAAAATGA+AGG | + | chr1.1:15067378-15067397 | MS.gene33645:intron | 25.0% |
| ! | TGTAATTCATGACACATATA+TGG | + | chr1.1:15066831-15066850 | MS.gene33645:CDS | 25.0% |
| !! | ACTTTCATCTGTTTTCAAAA+GGG | + | chr1.1:15066804-15066823 | MS.gene33645:CDS | 25.0% |
| !! | GAAATTTAGTTTCTGCATTT+GGG | - | chr1.1:15066714-15066733 | None:intergenic | 25.0% |
| AAATGTTGTTGGTACATCAA+TGG | + | chr1.1:15067767-15067786 | MS.gene33645:CDS | 30.0% | |
| CAAATTGAACAGATTGGAAT+TGG | + | chr1.1:15067300-15067319 | MS.gene33645:CDS | 30.0% | |
| GAATTCTGTGAATTCAGTAA+TGG | + | chr1.1:15067051-15067070 | MS.gene33645:CDS | 30.0% | |
| GATAAAAATGAAGGGAAAAG+AGG | + | chr1.1:15067387-15067406 | MS.gene33645:intron | 30.0% | |
| GTTATCAAAACACAGTTTCT+TGG | - | chr1.1:15067603-15067622 | None:intergenic | 30.0% | |
| TATCATTGATGTTCCTTCTA+TGG | + | chr1.1:15066981-15067000 | MS.gene33645:CDS | 30.0% | |
| ! | ACAAGTGTTAAAGATTGGTT+TGG | + | chr1.1:15067623-15067642 | MS.gene33645:intron | 30.0% |
| ! | ATGGATGTTTGAGATTGAAA+TGG | - | chr1.1:15066647-15066666 | None:intergenic | 30.0% |
| ! | CACTTTCATCTGTTTTCAAA+AGG | + | chr1.1:15066803-15066822 | MS.gene33645:CDS | 30.0% |
| ! | GGAAATTTAGTTTCTGCATT+TGG | - | chr1.1:15066715-15066734 | None:intergenic | 30.0% |
| ! | TACAGTTTTCTCTTCCATTT+GGG | + | chr1.1:15066924-15066943 | MS.gene33645:CDS | 30.0% |
| ! | TTACAGTTTTCTCTTCCATT+TGG | + | chr1.1:15066923-15066942 | MS.gene33645:CDS | 30.0% |
| ! | TTCAATTTGTTCCTCTGTTA+AGG | - | chr1.1:15067289-15067308 | None:intergenic | 30.0% |
| ! | TTTGAGATTGAAATGGAGTT+TGG | - | chr1.1:15066640-15066659 | None:intergenic | 30.0% |
| AAAAGAGGTGAACCTTCAAA+AGG | + | chr1.1:15067402-15067421 | MS.gene33645:intron | 35.0% | |
| AAACCAAGTGGTGATTGTTA+TGG | + | chr1.1:15066477-15066496 | MS.gene33645:CDS | 35.0% | |
| AACAACAACAACCTTAACAG+AGG | + | chr1.1:15067275-15067294 | MS.gene33645:CDS | 35.0% | |
| AACATACCTGTCCATTATGT+TGG | + | chr1.1:15066565-15066584 | MS.gene33645:CDS | 35.0% | |
| AAGCAATTCCAAAAACCAAG+TGG | + | chr1.1:15066465-15066484 | MS.gene33645:CDS | 35.0% | |
| AATACAAGCAGAGTAATCGA+AGG | + | chr1.1:15067084-15067103 | MS.gene33645:CDS | 35.0% | |
| ACATACCTGTCCATTATGTT+GGG | + | chr1.1:15066566-15066585 | MS.gene33645:CDS | 35.0% | |
| ATGATATGCGAGCTTTCAAT+TGG | - | chr1.1:15066967-15066986 | None:intergenic | 35.0% | |
| ATTGATGTTCCTTCTATGGA+AGG | + | chr1.1:15066985-15067004 | MS.gene33645:CDS | 35.0% | |
| CCATCATGAAATCAACGAAT+TGG | - | chr1.1:15067023-15067042 | None:intergenic | 35.0% | |
| GAACTTCGAAGTGATGAAAA+TGG | - | chr1.1:15066666-15066685 | None:intergenic | 35.0% | |
| GAAGAGAGAATTGAAGGAAT+GGG | + | chr1.1:15067429-15067448 | MS.gene33645:intron | 35.0% | |
| GAATGTTGTTAGAAGGTTGA+TGG | + | chr1.1:15067698-15067717 | MS.gene33645:CDS | 35.0% | |
| GAGGAACAAATTGAACAGAT+TGG | + | chr1.1:15067294-15067313 | MS.gene33645:CDS | 35.0% | |
| GTATAGAAGTCCCAACATAA+TGG | - | chr1.1:15066579-15066598 | None:intergenic | 35.0% | |
| GTGTTAAGAGATGCTGATAA+AGG | + | chr1.1:15067354-15067373 | MS.gene33645:intron | 35.0% | |
| TGAAGAGAGAATTGAAGGAA+TGG | + | chr1.1:15067428-15067447 | MS.gene33645:intron | 35.0% | |
| TGATTTCATGATGGCTCAAA+AGG | + | chr1.1:15067029-15067048 | MS.gene33645:CDS | 35.0% | |
| TGTAAAGAGGCTTCAAAAGA+CGG | - | chr1.1:15066751-15066770 | None:intergenic | 35.0% | |
| TTCTCTATCAACTCCAAGTA+AGG | - | chr1.1:15067111-15067130 | None:intergenic | 35.0% | |
| TTGGGCTAAAAGACATGAAT+TGG | + | chr1.1:15067656-15067675 | MS.gene33645:CDS | 35.0% | |
| ! | CTCTCTTCAAAACCTTTTGA+AGG | - | chr1.1:15067417-15067436 | None:intergenic | 35.0% |
| ! | TCACTTGCAATAAGAAGCAT+TGG | + | chr1.1:15067133-15067152 | MS.gene33645:CDS | 35.0% |
| ! | TTAGTTTCTGCATTTGGGTT+GGG | - | chr1.1:15066709-15066728 | None:intergenic | 35.0% |
| ! | TTTAGTTTCTGCATTTGGGT+TGG | - | chr1.1:15066710-15066729 | None:intergenic | 35.0% |
| !! | AAAGATTGGTTTGGTTGTGA+AGG | + | chr1.1:15067632-15067651 | MS.gene33645:intron | 35.0% |
| !! | AACAATCACCACTTGGTTTT+TGG | - | chr1.1:15066476-15066495 | None:intergenic | 35.0% |
| !! | ACCTTAGAGAGCATTTCAAT+GGG | + | chr1.1:15067540-15067559 | MS.gene33645:intron | 35.0% |
| !! | CACTTGCAATAAGAAGCATT+GGG | + | chr1.1:15067134-15067153 | MS.gene33645:CDS | 35.0% |
| !! | CCAATTCGTTGATTTCATGA+TGG | + | chr1.1:15067020-15067039 | MS.gene33645:CDS | 35.0% |
| !! | TACCTTAGAGAGCATTTCAA+TGG | + | chr1.1:15067539-15067558 | MS.gene33645:intron | 35.0% |
| !!! | CTTGGTTTTTGGAATTGCTT+TGG | - | chr1.1:15066465-15066484 | None:intergenic | 35.0% |
| !!! | GGTTTTGAAGAGAGAATTGA+AGG | + | chr1.1:15067423-15067442 | MS.gene33645:intron | 35.0% |
| AAAGACGGAACCATATGAGA+AGG | - | chr1.1:15066736-15066755 | None:intergenic | 40.0% | |
| AATCGTCAAGCTACAATTCG+TGG | + | chr1.1:15066601-15066620 | MS.gene33645:CDS | 40.0% | |
| AATTCTTAGCCACCCTTCAA+CGG | + | chr1.1:15067485-15067504 | MS.gene33645:intron | 40.0% | |
| AGTAATCGAAGGTCCTTACT+TGG | + | chr1.1:15067095-15067114 | MS.gene33645:CDS | 40.0% | |
| GAGGGGAAGAAAGATTCAAA+GGG | + | chr1.1:15067186-15067205 | MS.gene33645:CDS | 40.0% | |
| GGTTTATGAGTCATTGTGGA+TGG | + | chr1.1:15067511-15067530 | MS.gene33645:intron | 40.0% | |
| GTACCATAACAATCACCACT+TGG | - | chr1.1:15066483-15066502 | None:intergenic | 40.0% | |
| GTGATAAGATTAAGCGTGAG+AGG | - | chr1.1:15066543-15066562 | None:intergenic | 40.0% | |
| GTGGCTAAGAATTTCCAACT+GGG | - | chr1.1:15067478-15067497 | None:intergenic | 40.0% | |
| GTTGGTACATCAATGGATGA+AGG | + | chr1.1:15067774-15067793 | MS.gene33645:CDS | 40.0% | |
| TCAAAACACAGTTTCTTGGC+TGG | - | chr1.1:15067599-15067618 | None:intergenic | 40.0% | |
| TCAATGCTTAGAGGGTTGAA+GGG | - | chr1.1:15067168-15067187 | None:intergenic | 40.0% | |
| TCTTCCATTTGGGAGAGAAT+GGG | + | chr1.1:15066934-15066953 | MS.gene33645:CDS | 40.0% | |
| TGACACATATATGGCATCAG+TGG | + | chr1.1:15066840-15066859 | MS.gene33645:CDS | 40.0% | |
| TGAGGGGAAGAAAGATTCAA+AGG | + | chr1.1:15067185-15067204 | MS.gene33645:CDS | 40.0% | |
| TGGAGTTTCTCGTATGGAAA+TGG | + | chr1.1:15067797-15067816 | MS.gene33645:CDS | 40.0% | |
| TGGCTAAGAATTTCCAACTG+GGG | - | chr1.1:15067477-15067496 | None:intergenic | 40.0% | |
| ! | GGTGTAGAAGCTGATTCAAA+TGG | - | chr1.1:15066522-15066541 | None:intergenic | 40.0% |
| ! | TTTGGAATTGCTTTGGCCAT+TGG | - | chr1.1:15066458-15066477 | None:intergenic | 40.0% |
| ! | TTTTCCCATTCTCTCCCAAA+TGG | - | chr1.1:15066941-15066960 | None:intergenic | 40.0% |
| !! | AATAAGAAGCATTGGGCAGT+GGG | + | chr1.1:15067141-15067160 | MS.gene33645:CDS | 40.0% |
| !! | CCTTAGAGAGCATTTCAATG+GGG | + | chr1.1:15067541-15067560 | MS.gene33645:intron | 40.0% |
| !! | CTTAGAGAGCATTTCAATGG+GGG | + | chr1.1:15067542-15067561 | MS.gene33645:intron | 40.0% |
| !! | TAGAAGGTTGATGGAGACAA+CGG | + | chr1.1:15067707-15067726 | MS.gene33645:CDS | 40.0% |
| !! | TGGTTTGGTTGTGAAGGATT+GGG | + | chr1.1:15067638-15067657 | MS.gene33645:intron | 40.0% |
| !! | TTCAACCCTCTAAGCATTGA+GGG | + | chr1.1:15067168-15067187 | MS.gene33645:CDS | 40.0% |
| !! | TTGGTTTGGTTGTGAAGGAT+TGG | + | chr1.1:15067637-15067656 | MS.gene33645:intron | 40.0% |
| AAAGGGTAGACACTCATGCA+TGG | + | chr1.1:15067203-15067222 | MS.gene33645:CDS | 45.0% | |
| ATTCTTAGCCACCCTTCAAC+GGG | + | chr1.1:15067486-15067505 | MS.gene33645:intron | 45.0% | |
| CCCCATTGAAATGCTCTCTA+AGG | - | chr1.1:15067544-15067563 | None:intergenic | 45.0% | |
| CTCAATGCTTAGAGGGTTGA+AGG | - | chr1.1:15067169-15067188 | None:intergenic | 45.0% | |
| CTCTTCCATTTGGGAGAGAA+TGG | + | chr1.1:15066933-15066952 | MS.gene33645:CDS | 45.0% | |
| GGAGGGTTTATGAGTCATTG+TGG | + | chr1.1:15067507-15067526 | MS.gene33645:intron | 45.0% | |
| GGTACATCAATGGATGAAGG+TGG | + | chr1.1:15067777-15067796 | MS.gene33645:CDS | 45.0% | |
| GGTGGCTAAGAATTTCCAAC+TGG | - | chr1.1:15067479-15067498 | None:intergenic | 45.0% | |
| GTAGACACTCATGCATGGAA+TGG | + | chr1.1:15067208-15067227 | MS.gene33645:CDS | 45.0% | |
| TACAATTCGTGGCCAAGGTT+CGG | + | chr1.1:15066612-15066631 | MS.gene33645:CDS | 45.0% | |
| TCATAAACCCTCCCGTTGAA+GGG | - | chr1.1:15067500-15067519 | None:intergenic | 45.0% | |
| TCTTCCCCTCAATGCTTAGA+GGG | - | chr1.1:15067176-15067195 | None:intergenic | 45.0% | |
| TGAAGGTGGAGTTTCTCGTA+TGG | + | chr1.1:15067791-15067810 | MS.gene33645:CDS | 45.0% | |
| TTCTTCCCCTCAATGCTTAG+AGG | - | chr1.1:15067177-15067196 | None:intergenic | 45.0% | |
| TTGGGAGGAGGTGAAACAAA+GGG | - | chr1.1:15066691-15066710 | None:intergenic | 45.0% | |
| ! | CTTCAACCCTCTAAGCATTG+AGG | + | chr1.1:15067167-15067186 | MS.gene33645:CDS | 45.0% |
| ! | GTGAAGCATCCTTCCATAGA+AGG | - | chr1.1:15066997-15067016 | None:intergenic | 45.0% |
| !! | AAGGAATGGGCTTTGTTGTG+AGG | + | chr1.1:15067442-15067461 | MS.gene33645:intron | 45.0% |
| !! | AGGAATGGGCTTTGTTGTGA+GGG | + | chr1.1:15067443-15067462 | MS.gene33645:intron | 45.0% |
| !! | ATAAGAAGCATTGGGCAGTG+GGG | + | chr1.1:15067142-15067161 | MS.gene33645:CDS | 45.0% |
| !! | CAATAAGAAGCATTGGGCAG+TGG | + | chr1.1:15067140-15067159 | MS.gene33645:CDS | 45.0% |
| !! | GAAGTCCCAACATAATGGAC+AGG | - | chr1.1:15066574-15066593 | None:intergenic | 45.0% |
| !! | GATTCAAATGGCCTTGTGCT+GGG | - | chr1.1:15066510-15066529 | None:intergenic | 45.0% |
| !! | TCAACCCTCTAAGCATTGAG+GGG | + | chr1.1:15067169-15067188 | MS.gene33645:CDS | 45.0% |
| !! | TGATTCAAATGGCCTTGTGC+TGG | - | chr1.1:15066511-15066530 | None:intergenic | 45.0% |
| AGGCTCGCGAAGATGTAAAG+AGG | - | chr1.1:15066764-15066783 | None:intergenic | 50.0% | |
| ATGGTACCTTTCCCAGCACA+AGG | + | chr1.1:15066496-15066515 | MS.gene33645:CDS | 50.0% | |
| CAAGCTACAATTCGTGGCCA+AGG | + | chr1.1:15066607-15066626 | MS.gene33645:CDS | 50.0% | |
| CTCATAAACCCTCCCGTTGA+AGG | - | chr1.1:15067501-15067520 | None:intergenic | 50.0% | |
| GTTGGGAGGAGGTGAAACAA+AGG | - | chr1.1:15066692-15066711 | None:intergenic | 50.0% | |
| TGCATAGGCCATGCTGCTAT+TGG | - | chr1.1:15067570-15067589 | None:intergenic | 50.0% | |
| TGGAGTTTGGATCCGAACCT+TGG | - | chr1.1:15066627-15066646 | None:intergenic | 50.0% | |
| TTTACATCTTCGCGAGCCTG+TGG | + | chr1.1:15066765-15066784 | MS.gene33645:CDS | 50.0% | |
| ! | CTTGGCTGGTCAGAATGCAT+AGG | - | chr1.1:15067585-15067604 | None:intergenic | 50.0% |
| !! | AAATGGCCTTGTGCTGGGAA+AGG | - | chr1.1:15066505-15066524 | None:intergenic | 50.0% |
| !! | AGGTTGATGGAGACAACGGA+AGG | + | chr1.1:15067711-15067730 | MS.gene33645:CDS | 50.0% |
| !! | GGGCTTTGTTGTGAGGGATT+GGG | + | chr1.1:15067449-15067468 | MS.gene33645:intron | 50.0% |
| !! | GTTTCTGCATTTGGGTTGGG+AGG | - | chr1.1:15066706-15066725 | None:intergenic | 50.0% |
| !! | TGGGCTTTGTTGTGAGGGAT+TGG | + | chr1.1:15067448-15067467 | MS.gene33645:intron | 50.0% |
| GATTGCATGAGTTCCGCCAC+AGG | - | chr1.1:15066784-15066803 | None:intergenic | 55.0% | |
| GGAGGAGGTGAAACAAAGGG+AGG | - | chr1.1:15066688-15066707 | None:intergenic | 55.0% | |
| TAAACCCTCCCGTTGAAGGG+TGG | - | chr1.1:15067497-15067516 | None:intergenic | 55.0% | |
| TTAGCCACCCTTCAACGGGA+GGG | + | chr1.1:15067490-15067509 | MS.gene33645:intron | 55.0% | |
| !! | TCTGCATTTGGGTTGGGAGG+AGG | - | chr1.1:15066703-15066722 | None:intergenic | 55.0% |
| ACATCTTCGCGAGCCTGTGG+CGG | + | chr1.1:15066768-15066787 | MS.gene33645:CDS | 60.0% | |
| CTTAGCCACCCTTCAACGGG+AGG | + | chr1.1:15067489-15067508 | MS.gene33645:intron | 60.0% | |
| !! | TGGGGGTGCCAATAGCAGCA+TGG | + | chr1.1:15067559-15067578 | MS.gene33645:intron | 60.0% |
| GAGGGATTGGGCACCCCAGT+TGG | + | chr1.1:15067461-15067480 | MS.gene33645:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 15066448 | 15067848 | 15066448 | ID=MS.gene33645 |
| chr1.1 | mRNA | 15066448 | 15067848 | 15066448 | ID=MS.gene33645.t1;Parent=MS.gene33645 |
| chr1.1 | exon | 15066448 | 15067353 | 15066448 | ID=MS.gene33645.t1.exon1;Parent=MS.gene33645.t1 |
| chr1.1 | CDS | 15066448 | 15067353 | 15066448 | ID=cds.MS.gene33645.t1;Parent=MS.gene33645.t1 |
| chr1.1 | exon | 15067654 | 15067848 | 15067654 | ID=MS.gene33645.t1.exon2;Parent=MS.gene33645.t1 |
| chr1.1 | CDS | 15067654 | 15067848 | 15067654 | ID=cds.MS.gene33645.t1;Parent=MS.gene33645.t1 |
| Gene Sequence |
| Protein sequence |
