AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056365


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056365.t1 MTR_4g066590 96.750 523 13 2 1 523 1 519 0.0 1044
MS.gene056365.t1 MTR_4g066630 88.145 523 59 2 1 523 5 524 0.0 939
MS.gene056365.t1 MTR_4g066580 74.662 517 129 1 4 520 8 522 0.0 834
MS.gene056365.t1 MTR_4g066630 89.059 457 48 1 1 457 5 459 0.0 829
MS.gene056365.t1 MTR_4g067040 95.854 410 14 1 1 410 1 407 0.0 816
MS.gene056365.t1 MTR_3g028720 73.025 519 136 2 6 520 3 521 0.0 816
MS.gene056365.t1 MTR_4g067040 95.373 389 15 1 1 389 1 386 0.0 772
MS.gene056365.t1 MTR_4g066630 89.336 422 43 1 1 422 5 424 0.0 766
MS.gene056365.t1 MTR_2g098540 71.343 499 141 1 13 511 9 505 0.0 757
MS.gene056365.t1 MTR_2g098790 68.493 511 158 2 1 511 5 512 0.0 751
MS.gene056365.t1 MTR_2g098520 72.083 480 134 0 32 511 29 508 0.0 746
MS.gene056365.t1 MTR_6g078450 69.643 504 147 1 8 511 13 510 0.0 741
MS.gene056365.t1 MTR_3g028720 73.304 457 118 2 6 458 3 459 0.0 719
MS.gene056365.t1 MTR_4g066210 68.267 479 152 0 33 511 39 517 0.0 719
MS.gene056365.t1 MTR_2g098540 73.465 456 121 0 56 511 6 461 0.0 719
MS.gene056365.t1 MTR_6g078330 69.710 482 144 1 37 518 37 516 0.0 712
MS.gene056365.t1 MTR_4g066240 65.619 509 167 2 4 511 9 510 0.0 712
MS.gene056365.t1 MTR_4g066640 65.743 505 167 3 8 511 12 511 0.0 712
MS.gene056365.t1 MTR_4g066240 65.490 510 167 3 4 511 9 511 0.0 708
MS.gene056365.t1 MTR_6g078380 67.723 505 156 2 8 511 13 511 0.0 701
MS.gene056365.t1 MTR_4g066630 89.628 376 37 1 1 376 5 378 0.0 684
MS.gene056365.t1 MTR_5g071520 65.377 517 169 2 4 511 7 522 0.0 682
MS.gene056365.t1 MTR_4g066580 74.704 423 105 1 4 426 8 428 0.0 677
MS.gene056365.t1 MTR_3g028720 73.286 423 109 2 6 424 3 425 0.0 661
MS.gene056365.t1 MTR_6g078450 73.050 423 114 0 36 458 35 457 0.0 658
MS.gene056365.t1 MTR_4g066330 62.231 511 163 3 6 514 12 494 0.0 650
MS.gene056365.t1 MTR_4g066340 68.287 432 137 0 80 511 6 437 0.0 635
MS.gene056365.t1 MTR_3g026280 62.605 476 173 2 36 511 21 491 0.0 635
MS.gene056365.t1 MTR_4g066280 61.277 501 164 3 13 511 19 491 0.0 634
MS.gene056365.t1 MTR_4g023000 61.134 476 179 3 36 511 23 492 0.0 611
MS.gene056365.t1 MTR_6g078330 68.599 414 128 1 105 518 1 412 0.0 604
MS.gene056365.t1 MTR_3g028720 72.868 387 101 2 6 388 3 389 0.0 602
MS.gene056365.t1 MTR_4g066240 65.000 420 139 2 4 422 9 421 0.0 581
MS.gene056365.t1 MTR_2g043200 60.294 476 155 6 42 511 70 517 0.0 567
MS.gene056365.t1 MTR_6g078330 66.418 402 131 2 117 518 15 412 0.0 566
MS.gene056365.t1 MTR_4g015420 56.175 502 180 7 22 511 50 523 0.0 563
MS.gene056365.t1 MTR_3g026400 54.599 511 216 6 4 511 10 507 0.0 561
MS.gene056365.t1 MTR_3g026620 52.559 508 232 5 4 511 10 508 0.0 539
MS.gene056365.t1 MTR_4g015460 56.996 486 170 9 37 511 42 499 0.0 534
MS.gene056365.t1 MTR_4g083000 52.465 507 229 6 9 511 3 501 0.0 533
MS.gene056365.t1 MTR_4g066640 65.535 383 126 3 8 389 12 389 0.0 532
MS.gene056365.t1 MTR_3g026400 55.675 467 199 5 46 511 17 476 0.0 530
MS.gene056365.t1 MTR_6g078330 72.537 335 92 0 37 371 37 371 0.0 528
MS.gene056365.t1 MTR_5g044000 50.382 524 231 7 13 511 1 520 0.0 521
MS.gene056365.t1 MTR_4g081530 49.414 512 247 6 10 518 3 505 3.14e-169 488
MS.gene056365.t1 MTR_0110s0040 48.242 512 250 7 4 514 16 513 1.40e-167 484
MS.gene056365.t1 MTR_0110s0030 47.656 512 253 7 4 514 16 513 1.14e-166 482
MS.gene056365.t1 MTR_3g033790 48.963 482 231 6 37 517 19 486 7.12e-159 461
MS.gene056365.t1 MTR_3g033810 48.861 483 233 5 36 517 20 489 8.97e-159 461
MS.gene056365.t1 MTR_4g131810 48.025 481 233 5 42 513 33 505 5.62e-156 455
MS.gene056365.t1 MTR_2g022760 48.319 476 241 4 46 519 45 517 6.76e-152 444
MS.gene056365.t1 MTR_4g083000 52.311 411 188 4 105 511 1 407 1.66e-149 434
MS.gene056365.t1 MTR_4g131800 47.193 481 248 5 42 520 521 997 6.96e-147 447
MS.gene056365.t1 MTR_2g079580 44.106 492 262 7 37 523 32 515 1.34e-146 431
MS.gene056365.t1 MTR_2g079550 44.919 492 258 7 37 523 30 513 3.60e-146 430
MS.gene056365.t1 MTR_4g016920 46.201 487 246 7 36 520 26 498 2.18e-145 428
MS.gene056365.t1 MTR_3g026400 57.735 362 139 5 4 362 10 360 7.04e-145 421
MS.gene056365.t1 MTR_7g068910 46.025 478 242 6 36 511 30 493 1.51e-144 426
MS.gene056365.t1 MTR_7g033860 45.135 483 238 7 39 513 50 513 3.23e-142 419
MS.gene056365.t1 MTR_7g068910 45.082 488 242 7 36 511 30 503 3.88e-141 417
MS.gene056365.t1 MTR_2g022710 43.327 517 281 9 6 518 5 513 6.71e-141 416
MS.gene056365.t1 MTR_5g068740 45.287 488 238 9 32 511 22 488 5.60e-137 406
MS.gene056365.t1 MTR_1g088610 45.791 487 236 8 32 511 22 487 6.31e-137 410
MS.gene056365.t1 MTR_1g088610 36.207 116 67 2 397 511 503 612 1.70e-12 70.5
MS.gene056365.t1 MTR_0108s0030 43.271 483 237 5 39 517 5 454 1.33e-136 403
MS.gene056365.t1 MTR_7g051610 44.351 478 246 6 38 514 76 534 1.10e-127 383
MS.gene056365.t1 MTR_7g051510 42.739 482 254 5 38 517 76 537 1.96e-125 377
MS.gene056365.t1 MTR_0110s0040 48.477 394 191 5 4 395 16 399 2.90e-125 372
MS.gene056365.t1 MTR_7g051650 42.977 477 251 6 38 512 76 533 1.03e-123 373
MS.gene056365.t1 MTR_7g051650 42.437 476 251 5 38 512 76 529 1.18e-122 370
MS.gene056365.t1 MTR_2g022760 46.043 417 220 4 105 519 1 414 2.60e-122 365
MS.gene056365.t1 MTR_2g079580 46.292 391 198 6 37 422 32 415 1.60e-121 363
MS.gene056365.t1 MTR_7g068900 45.390 423 205 8 100 514 17 421 5.09e-119 359
MS.gene056365.t1 MTR_4g016920 44.976 418 215 6 105 520 1 405 1.50e-117 353
MS.gene056365.t1 MTR_1g088630 44.276 463 206 11 56 511 14 431 3.12e-117 353
MS.gene056365.t1 MTR_2g022710 42.232 457 254 7 6 458 5 455 4.40e-117 353
MS.gene056365.t1 MTR_2g022710 42.232 457 254 7 6 458 5 455 6.65e-117 353
MS.gene056365.t1 MTR_2g022710 43.468 421 228 7 6 422 5 419 6.40e-114 344
MS.gene056365.t1 MTR_2g022710 42.308 416 234 5 105 518 1 412 1.79e-112 340
MS.gene056365.t1 MTR_2g022710 42.787 409 224 7 6 410 5 407 5.90e-108 328
MS.gene056365.t1 MTR_7g056747 43.301 418 211 4 99 515 9 401 2.95e-106 323
MS.gene056365.t1 MTR_1g088630 50.621 322 123 6 39 356 29 318 1.57e-103 315
MS.gene056365.t1 MTR_2g022710 44.010 384 205 7 6 385 5 382 4.66e-102 313
MS.gene056365.t1 MTR_4g016920 53.558 267 121 2 105 370 1 265 8.35e-96 293
MS.gene056365.t1 MTR_1g088630 53.532 269 113 4 39 303 29 289 1.30e-93 288
MS.gene056365.t1 MTR_0110s0020 50.763 262 120 4 5 266 16 268 2.22e-89 277
MS.gene056365.t1 MTR_5g069350 43.860 171 55 5 351 511 48 187 1.25e-30 118
MS.gene056365.t1 MTR_4g122980 25.647 425 231 12 101 513 183 534 1.58e-28 120
MS.gene056365.t1 MTR_8g038650 38.636 132 68 2 237 358 24 152 1.73e-24 100
MS.gene056365.t1 MTR_8g038650 55.556 54 23 1 46 99 7 59 2.24e-13 68.6
MS.gene056365.t1 MTR_4g061170 80.488 41 6 1 460 498 24 64 4.00e-15 70.5
MS.gene056365.t1 MTR_7g028885 42.857 70 36 1 243 308 21 90 1.42e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056365.t1 AT5G44640 53.772 517 227 5 1 516 1 506 0.0 576
MS.gene056365.t1 AT2G44450 55.858 478 206 2 37 514 31 503 0.0 570
MS.gene056365.t1 AT5G42260 54.528 508 219 5 1 507 1 497 0.0 568
MS.gene056365.t1 AT2G44480 54.583 480 217 1 36 515 34 512 0.0 562
MS.gene056365.t1 AT2G44480 54.583 480 217 1 36 515 65 543 0.0 562
MS.gene056365.t1 AT3G60130 55.462 476 206 3 37 511 30 500 0.0 557
MS.gene056365.t1 AT2G25630 51.786 504 220 4 14 516 7 488 0.0 538
MS.gene056365.t1 AT5G24550 52.965 489 225 5 37 521 32 519 0.0 534
MS.gene056365.t1 AT5G24540 51.248 521 240 8 9 521 5 519 0.0 524
MS.gene056365.t1 AT3G60140 49.900 499 239 6 16 511 12 502 0.0 523
MS.gene056365.t1 AT1G51470 53.862 479 207 7 36 512 44 510 3.95e-180 516
MS.gene056365.t1 AT1G26560 52.075 482 221 6 37 513 32 508 5.72e-178 511
MS.gene056365.t1 AT1G47600 53.236 479 210 7 36 512 44 510 2.14e-177 509
MS.gene056365.t1 AT1G47600 53.236 479 209 7 36 512 44 509 5.40e-177 508
MS.gene056365.t1 AT3G60120 51.452 482 223 7 36 511 13 489 8.87e-174 501
MS.gene056365.t1 AT2G44460 48.084 522 256 6 1 519 3 512 8.45e-173 500
MS.gene056365.t1 AT3G18080 50.719 487 230 7 32 516 34 512 4.81e-171 493
MS.gene056365.t1 AT5G54570 49.485 485 228 4 36 511 29 505 2.02e-170 492
MS.gene056365.t1 AT2G44470 47.239 489 254 4 27 512 19 506 5.75e-170 493
MS.gene056365.t1 AT2G44490 49.795 488 238 6 29 511 7 492 2.32e-169 491
MS.gene056365.t1 AT3G18070 49.187 492 230 9 28 516 21 495 1.08e-166 481
MS.gene056365.t1 AT3G18070 49.390 492 235 9 28 516 21 501 7.93e-166 479
MS.gene056365.t1 AT5G25980 47.719 526 263 9 4 523 17 536 9.48e-165 478
MS.gene056365.t1 AT2G44480 52.555 411 194 1 105 515 1 410 3.55e-163 469
MS.gene056365.t1 AT3G60130 54.106 414 184 3 99 511 40 448 6.03e-163 471
MS.gene056365.t1 AT5G36890 49.689 483 228 5 38 517 17 487 6.97e-159 461
MS.gene056365.t1 AT5G36890 49.793 482 227 5 38 516 17 486 1.43e-158 461
MS.gene056365.t1 AT3G09260 48.333 480 241 6 37 512 35 511 5.95e-158 460
MS.gene056365.t1 AT2G32860 45.228 482 261 3 36 514 93 574 1.24e-156 460
MS.gene056365.t1 AT3G60130 53.140 414 177 4 99 511 40 437 4.67e-156 452
MS.gene056365.t1 AT5G26000 46.899 516 254 10 8 511 4 511 3.25e-155 454
MS.gene056365.t1 AT2G32860 45.228 482 260 4 36 514 93 573 4.50e-155 456
MS.gene056365.t1 AT3G03640 44.574 516 275 5 1 511 3 512 1.77e-153 449
MS.gene056365.t1 AT5G24540 50.219 456 214 7 9 457 5 454 2.10e-153 446
MS.gene056365.t1 AT1G75940 47.251 491 243 9 37 516 37 522 6.36e-153 447
MS.gene056365.t1 AT3G21370 46.170 483 250 8 36 511 32 511 3.69e-151 443
MS.gene056365.t1 AT1G52400 45.331 514 268 10 8 514 11 518 4.29e-151 443
MS.gene056365.t1 AT1G52400 45.331 514 268 10 8 514 11 518 4.29e-151 443
MS.gene056365.t1 AT1G66280 46.230 504 257 9 16 511 13 510 1.11e-149 439
MS.gene056365.t1 AT5G28510 45.732 492 255 7 31 513 33 521 2.04e-149 439
MS.gene056365.t1 AT5G54570 48.492 431 206 3 36 458 29 451 2.21e-147 431
MS.gene056365.t1 AT1G61820 46.612 487 252 7 29 511 22 504 7.58e-147 431
MS.gene056365.t1 AT1G66270 46.377 483 247 8 37 513 36 512 2.05e-146 431
MS.gene056365.t1 AT2G44470 45.958 433 231 3 27 457 19 450 2.07e-146 428
MS.gene056365.t1 AT3G60140 48.900 409 199 5 16 422 12 412 3.05e-145 425
MS.gene056365.t1 AT1G02850 47.158 475 234 7 38 511 27 485 3.81e-145 426
MS.gene056365.t1 AT5G25980 47.484 457 232 6 4 458 17 467 1.29e-143 421
MS.gene056365.t1 AT5G25980 47.484 457 232 6 4 458 17 467 1.29e-143 421
MS.gene056365.t1 AT1G66270 46.170 483 246 9 37 513 36 510 1.75e-143 423
MS.gene056365.t1 AT4G21760 43.725 510 274 7 6 511 21 521 1.90e-141 419
MS.gene056365.t1 AT1G02850 44.980 498 234 8 38 511 27 508 1.24e-140 416
MS.gene056365.t1 AT1G02850 45.090 499 233 9 38 511 27 509 4.46e-139 412
MS.gene056365.t1 AT5G54570 48.077 416 199 4 105 511 1 408 1.86e-137 405
MS.gene056365.t1 AT1G60090 43.878 490 249 10 37 522 24 491 4.22e-137 406
MS.gene056365.t1 AT1G61810 45.267 486 257 8 42 522 38 519 8.45e-137 406
MS.gene056365.t1 AT2G44480 60.256 312 122 2 36 347 65 374 8.81e-137 401
MS.gene056365.t1 AT4G27830 42.095 506 266 7 9 511 3 484 3.41e-136 404
MS.gene056365.t1 AT5G26000 45.987 461 231 8 8 458 4 456 1.38e-135 400
MS.gene056365.t1 AT1G02850 45.684 475 214 8 38 511 27 458 3.15e-135 400
MS.gene056365.t1 AT4G21760 42.745 510 269 8 6 511 21 511 2.40e-134 400
MS.gene056365.t1 AT2G44450 51.541 357 168 2 158 514 1 352 1.39e-133 392
MS.gene056365.t1 AT1G60090 42.600 500 248 11 37 522 24 498 3.63e-133 396
MS.gene056365.t1 AT4G22100 44.351 478 244 9 38 511 23 482 2.45e-132 394
MS.gene056365.t1 AT1G61810 46.204 461 240 7 42 498 38 494 2.68e-132 395
MS.gene056365.t1 AT3G62750 41.837 490 253 8 26 511 12 473 9.75e-129 384
MS.gene056365.t1 AT3G62750 41.837 490 253 8 26 511 38 499 1.98e-128 385
MS.gene056365.t1 AT4G27820 43.542 480 248 7 36 511 22 482 3.08e-128 384
MS.gene056365.t1 AT1G45191 43.724 478 241 9 38 511 30 483 8.97e-128 382
MS.gene056365.t1 AT2G44470 45.646 379 203 3 27 403 19 396 2.84e-126 375
MS.gene056365.t1 AT1G52400 44.298 456 242 9 8 457 11 460 7.68e-126 376
MS.gene056365.t1 AT1G45191 42.300 487 246 9 38 511 30 494 3.30e-124 374
MS.gene056365.t1 AT1G45191 42.469 478 253 9 38 511 30 489 1.01e-123 372
MS.gene056365.t1 AT1G45191 41.851 497 246 10 38 511 30 506 9.61e-123 370
MS.gene056365.t1 AT3G62740 40.695 489 265 10 26 511 12 478 1.78e-122 369
MS.gene056365.t1 AT5G48375 45.638 447 171 9 33 476 34 411 6.33e-121 362
MS.gene056365.t1 AT1G02850 46.324 408 186 6 38 422 27 424 2.30e-120 361
MS.gene056365.t1 AT3G18070 51.796 334 154 5 28 361 21 347 1.16e-119 357
MS.gene056365.t1 AT2G44460 47.956 367 187 4 156 519 1 366 4.24e-112 340
MS.gene056365.t1 AT1G60270 48.256 344 167 5 37 377 24 359 1.37e-111 336
MS.gene056365.t1 AT3G62750 41.324 438 226 7 26 460 38 447 3.93e-111 338
MS.gene056365.t1 AT1G51490 49.432 352 161 7 44 392 27 364 1.44e-109 332
MS.gene056365.t1 AT1G61810 43.499 423 230 8 105 522 1 419 2.09e-109 332
MS.gene056365.t1 AT1G61810 45.455 385 203 6 42 422 38 419 1.35e-108 330
MS.gene056365.t1 AT3G62740 41.549 426 225 9 34 457 20 423 3.45e-108 329
MS.gene056365.t1 AT4G27830 41.707 410 222 5 105 511 1 396 1.34e-106 325
MS.gene056365.t1 AT1G45191 48.512 336 161 5 38 370 30 356 4.29e-106 323
MS.gene056365.t1 AT1G45191 48.512 336 161 5 38 370 30 356 4.92e-106 323
MS.gene056365.t1 AT3G62750 45.946 333 164 4 26 358 12 328 1.04e-103 316
MS.gene056365.t1 AT3G62750 45.946 333 164 4 26 358 12 328 1.04e-103 316
MS.gene056365.t1 AT3G62750 45.946 333 164 4 26 358 38 354 9.75e-103 316
MS.gene056365.t1 AT3G18070 47.590 332 165 6 188 516 99 424 7.29e-101 310
MS.gene056365.t1 AT3G18070 56.944 72 30 1 28 99 21 91 2.43e-19 90.9
MS.gene056365.t1 AT2G44480 48.013 302 156 1 214 515 6 306 7.81e-101 306
MS.gene056365.t1 AT1G61820 44.932 365 194 6 151 511 4 365 7.07e-100 306
MS.gene056365.t1 AT4G27820 42.092 411 220 6 105 511 1 397 1.70e-99 307
MS.gene056365.t1 AT4G27820 42.092 411 220 6 105 511 1 397 1.70e-99 307
MS.gene056365.t1 AT3G62750 39.659 411 221 7 105 511 1 388 7.19e-97 300
MS.gene056365.t1 AT3G62750 39.659 411 221 7 105 511 1 388 7.19e-97 300
MS.gene056365.t1 AT3G18070 46.855 318 160 6 202 516 1 312 9.73e-94 288
MS.gene056365.t1 AT1G61810 52.075 265 125 2 42 306 38 300 1.14e-89 278
MS.gene056365.t1 AT1G60270 47.101 276 139 4 105 377 1 272 8.65e-82 256
MS.gene056365.t1 AT3G18070 45.082 244 130 3 183 424 94 335 3.17e-67 221
MS.gene056365.t1 AT3G18070 56.944 72 30 1 28 99 21 91 1.17e-19 90.9
MS.gene056365.t1 AT3G18070 44.643 224 120 3 202 423 1 222 1.94e-60 199
MS.gene056365.t1 AT5G16580 36.025 322 177 7 152 468 2 299 1.47e-48 170
MS.gene056365.t1 AT3G06510 24.829 439 253 14 100 513 159 545 3.42e-29 122
MS.gene056365.t1 AT3G06510 25.117 426 234 14 100 513 159 511 2.61e-28 119

Find 93 sgRNAs with CRISPR-Local

Find 133 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATTTATATTACTGAAAA+TGG 0.152248 4.1:-34243463 MS.gene056365:intron
TTTCCAGAAGGATTCATATT+TGG 0.213392 4.1:-34245031 MS.gene056365:CDS
CACCAGGTCGATGTTCTTCT+TGG 0.235520 4.1:-34244326 MS.gene056365:CDS
TTTGTTTAATTATAGGTTTA+TGG 0.249802 4.1:-34244001 MS.gene056365:intron
TGATAATGTGCTACTAAATA+TGG 0.259980 4.1:+34244264 None:intergenic
AATTGCACCGGTGGTGATTC+TGG 0.263758 4.1:-34244294 MS.gene056365:CDS
GAATCACCACCGGTGCAATT+TGG 0.269114 4.1:+34244297 None:intergenic
GTGGAAGAGGACCAAGTATA+TGG 0.292452 4.1:-34244964 MS.gene056365:CDS
GAACTTTGCTTCAAAACATT+TGG 0.292593 4.1:-34244426 MS.gene056365:CDS
ATCACTTGAGGAATCACTTA+TGG 0.300312 4.1:-34243261 MS.gene056365:CDS
ATTTCCAGGTTGCTTCAAAT+TGG 0.303894 4.1:-34243552 MS.gene056365:intron
AAGGGTTATACTGTGAGATT+TGG 0.335317 4.1:-34243024 MS.gene056365:CDS
TTATAGGTTTATGGATCCTT+TGG 0.340245 4.1:-34243992 MS.gene056365:intron
CGAGCTACAGACTTTATGTT+TGG 0.352239 4.1:-34244102 MS.gene056365:CDS
TTTCAGTAATATAAATTAAA+GGG 0.356229 4.1:+34243467 None:intergenic
AAACTGCAGAAAAGATTTCC+AGG 0.361097 4.1:-34244457 MS.gene056365:intron
TAGACAACAAGAGAGAAAAT+AGG 0.369329 4.1:+34245143 None:intergenic
AGATAACAAACTTGATATAA+AGG 0.370220 4.1:-34244133 MS.gene056365:CDS
GTGCCAAATATGAATCCTTC+TGG 0.376797 4.1:+34245028 None:intergenic
CCTCCACTTAGTTTCCCATC+TGG 0.378131 4.1:+34244785 None:intergenic
AAAGTATCAAATCTCTCAAA+AGG 0.385620 4.1:-34244202 MS.gene056365:CDS
CAACAACCTCATCAATGAAT+TGG 0.386777 4.1:-34244735 MS.gene056365:CDS
TGCAAATAGGTTCATTGAAT+AGG 0.387545 4.1:-34245060 MS.gene056365:CDS
CTCCACTTAGTTTCCCATCT+GGG 0.388126 4.1:+34244786 None:intergenic
ATCTCTCAAAAGGGTGTGAT+AGG 0.391503 4.1:-34244192 MS.gene056365:CDS
AACACTGCACCACTGCAAAT+AGG 0.401953 4.1:-34245073 MS.gene056365:CDS
ATACTTTGCATGGTCTTTGT+TGG 0.413214 4.1:-34243064 MS.gene056365:CDS
TGGTAACCTTGTTCTTACTA+AGG 0.438507 4.1:+34243939 None:intergenic
CAGACACTAGAAGATGAATA+TGG 0.438703 4.1:-34244588 MS.gene056365:CDS
AGAAAGTCTCGAATTGCTCT+TGG 0.442143 4.1:+34243517 None:intergenic
ATCAATGAATTGGTGGCAAA+TGG 0.452944 4.1:-34244725 MS.gene056365:intron
CAGGGCTGGTGTAAATGTAA+AGG 0.460153 4.1:-34243088 MS.gene056365:CDS
AGTGAATCTGTTAGATAGCT+AGG 0.464690 4.1:+34243805 None:intergenic
AAAAGATATCAAAAGCTCTC+AGG 0.470702 4.1:-34242970 MS.gene056365:CDS
GGTTTGCCATTGCTTAATTG+AGG 0.479254 4.1:+34243826 None:intergenic
AGGGCTGGTGTAAATGTAAA+GGG 0.484456 4.1:-34243087 MS.gene056365:CDS
GCAGCAAGTGAAGGTGGAAG+AGG 0.487766 4.1:-34244977 MS.gene056365:CDS
GAGTATTCTAGACCAAGATA+TGG 0.491540 4.1:+34244808 None:intergenic
AACACTTACATTTAGACCAA+TGG 0.493905 4.1:+34243651 None:intergenic
CTACAGACTTTATGTTTGGA+TGG 0.494332 4.1:-34244098 MS.gene056365:intron
TCATTTATTCTATCTTAATG+AGG 0.494555 4.1:-34243210 MS.gene056365:CDS
TGGGTATGCAAATGGTGAAA+TGG 0.498834 4.1:-34244349 MS.gene056365:CDS
CCATGGACTTACAGTCAAGA+TGG 0.501018 4.1:-34244369 MS.gene056365:CDS
AGTTTACAAAAGAGCAATCA+AGG 0.505341 4.1:-34243915 MS.gene056365:CDS
AGCAAAGTTCTGCATAGTCC+TGG 0.506435 4.1:+34244439 None:intergenic
AGTCAAGATGGGTATGCAAA+TGG 0.507686 4.1:-34244357 MS.gene056365:CDS
ATGTGCTACTAAATATGGTT+CGG 0.514184 4.1:+34244269 None:intergenic
TTTATGGATCCTTTGGCCAA+TGG 0.515044 4.1:-34243985 MS.gene056365:CDS
TTCATTATTACTTTAACAGA+AGG 0.515348 4.1:-34245109 MS.gene056365:CDS
TGGAAGAGGACCAAGTATAT+GGG 0.531156 4.1:-34244963 MS.gene056365:CDS
CAACCTCATCAATGAATTGG+TGG 0.531865 4.1:-34244732 MS.gene056365:CDS
TCTTCTGCATATCAATATGA+AGG 0.549189 4.1:-34245001 MS.gene056365:CDS
AAAATCAGTGATGGAAACAA+TGG 0.553564 4.1:-34244914 MS.gene056365:CDS
GATTCCTCAAGTGATAATGA+TGG 0.553887 4.1:+34243269 None:intergenic
TTGGAGATAGAGTAAAACAT+TGG 0.559088 4.1:-34244407 MS.gene056365:CDS
TGGTCTAGAATACTCCCAGA+TGG 0.563550 4.1:-34244800 MS.gene056365:CDS
TTGCCACCAATTCATTGATG+AGG 0.565832 4.1:+34244729 None:intergenic
GGATAATCTCCATTGGCCAA+AGG 0.565951 4.1:+34243976 None:intergenic
AAGTATCAAATCTCTCAAAA+GGG 0.567104 4.1:-34244201 MS.gene056365:CDS
ATCAAAAGCTCTCAGGATTG+TGG 0.567379 4.1:-34242963 MS.gene056365:CDS
GTGAAAGTATCCCATATACT+TGG 0.569026 4.1:+34244953 None:intergenic
CTCCCAGATGGGAAACTAAG+TGG 0.570318 4.1:-34244788 MS.gene056365:CDS
CATCGATACAAGGAAGATGT+TGG 0.573937 4.1:-34244869 MS.gene056365:CDS
GCAAATGGTGAAATGGCACC+AGG 0.576425 4.1:-34244342 MS.gene056365:CDS
CCATCTTGACTGTAAGTCCA+TGG 0.578921 4.1:+34244369 None:intergenic
GTATCACTCACATGATGAGT+GGG 0.583322 4.1:+34244553 None:intergenic
TTCAATGAACCTATTTGCAG+TGG 0.584960 4.1:+34245064 None:intergenic
TCAAGTTTGTTATCTGAGAG+TGG 0.587930 4.1:+34244141 None:intergenic
TATCATGAAGGATATGAACT+TGG 0.589450 4.1:-34244846 MS.gene056365:CDS
TATTCATCTTCTAGTGTCTG+AGG 0.591803 4.1:+34244591 None:intergenic
TGGTTGAATCCAAATTGCAC+CGG 0.592901 4.1:-34244306 MS.gene056365:CDS
GGATAACTTTGAATGAGCCA+TGG 0.594373 4.1:-34244386 MS.gene056365:CDS
AGTGGAGGAATTAATCAAGA+AGG 0.596031 4.1:-34244770 MS.gene056365:CDS
GAAGGTGCAGCAAGTGAAGG+TGG 0.597164 4.1:-34244983 MS.gene056365:CDS
CATGGACTTACAGTCAAGAT+GGG 0.597238 4.1:-34244368 MS.gene056365:CDS
TATGAAGGTGCAGCAAGTGA+AGG 0.604375 4.1:-34244986 MS.gene056365:CDS
GGTCTAGAATACTCCCAGAT+GGG 0.607544 4.1:-34244799 MS.gene056365:CDS
GGAAGATGTTGGTATCATGA+AGG 0.609097 4.1:-34244858 MS.gene056365:CDS
TGATCCATCATTATCACTTG+AGG 0.609826 4.1:-34243273 MS.gene056365:CDS
TGTATCACTCACATGATGAG+TGG 0.613126 4.1:+34244552 None:intergenic
ATGTAAAGGGATACTTTGCA+TGG 0.626161 4.1:-34243074 MS.gene056365:CDS
TTCGGTTCCAGAATCACCAC+CGG 0.630837 4.1:+34244287 None:intergenic
GTGATTGCAGTCGAACGTGA+TGG 0.630848 4.1:-34243679 MS.gene056365:intron
GATGCACCTCAATTAAGCAA+TGG 0.645151 4.1:-34243832 MS.gene056365:CDS
GGGTGTGATAGGTATAACAT+TGG 0.663042 4.1:-34244181 MS.gene056365:CDS
TGAGAGCCTTAGTAAGAACA+AGG 0.667098 4.1:-34243945 MS.gene056365:CDS
TTGAATCCAAATTGCACCGG+TGG 0.672179 4.1:-34244303 MS.gene056365:CDS
AACCAAGAAGAACATCGACC+TGG 0.677559 4.1:+34244324 None:intergenic
GAGCAATCAAGGCTAGTGAG+TGG 0.679451 4.1:-34243904 MS.gene056365:CDS
TGACTCGTATCATCGATACA+AGG 0.682881 4.1:-34244879 MS.gene056365:CDS
CCAGATGGGAAACTAAGTGG+AGG 0.696893 4.1:-34244785 MS.gene056365:CDS
TGGAAACAATGGAGACGTTG+CGG 0.708998 4.1:-34244903 MS.gene056365:CDS
ACACTAGAAGATGAATATGG+CGG 0.722512 4.1:-34244585 MS.gene056365:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTATAAATTTAAATTAA+TGG - chr4.1:34244343-34244362 MS.gene056365:CDS 0.0%
!! TTAATTTATATTACTGAAAA+TGG - chr4.1:34244600-34244619 MS.gene056365:CDS 10.0%
!! TTTCAGTAATATAAATTAAA+GGG + chr4.1:34244599-34244618 None:intergenic 10.0%
!!! TTTTCAGTAATATAAATTAA+AGG + chr4.1:34244600-34244619 None:intergenic 10.0%
!! AAATCAGTAATTAATGAATT+TGG - chr4.1:34244481-34244500 MS.gene056365:intron 15.0%
!! ATAATCAATAGATATAAAGT+AGG + chr4.1:34244314-34244333 None:intergenic 15.0%
!! TAACTTAGTTTAAATATTTG+TGG - chr4.1:34243553-34243572 MS.gene056365:intron 15.0%
!! TTTGTTTAATTATAGGTTTA+TGG - chr4.1:34244062-34244081 MS.gene056365:intron 15.0%
!!! AATAAGCTTTATAGTTAATT+TGG + chr4.1:34244035-34244054 None:intergenic 15.0%
!!! TTTCTTTTAATGTAAATACA+GGG - chr4.1:34244957-34244976 MS.gene056365:CDS 15.0%
!! ACATTTGTAGATTACAAAAA+TGG - chr4.1:34245066-34245085 MS.gene056365:CDS 20.0%
!! AGATAACAAACTTGATATAA+AGG - chr4.1:34243930-34243949 MS.gene056365:CDS 20.0%
!! TCATTTATTCTATCTTAATG+AGG - chr4.1:34244853-34244872 MS.gene056365:CDS 20.0%
!! TTCATTATTACTTTAACAGA+AGG - chr4.1:34242954-34242973 MS.gene056365:CDS 20.0%
!! TTTAGACAAAACAAAATAAC+AGG + chr4.1:34244464-34244483 None:intergenic 20.0%
!!! AATTTGGTTATTTTATTTCC+AGG - chr4.1:34244497-34244516 MS.gene056365:intron 20.0%
!!! CGATTTCTTTGTTTAATTAT+AGG - chr4.1:34244055-34244074 MS.gene056365:intron 20.0%
!!! CTTTCTTTTAATGTAAATAC+AGG - chr4.1:34244956-34244975 MS.gene056365:CDS 20.0%
!!! TAAGTAGTTAGAAATTTTGA+GGG + chr4.1:34244441-34244460 None:intergenic 20.0%
! AAGTATCAAATCTCTCAAAA+GGG - chr4.1:34243862-34243881 MS.gene056365:CDS 25.0%
!! AAAGTATCAAATCTCTCAAA+AGG - chr4.1:34243861-34243880 MS.gene056365:CDS 25.0%
!! GTAAGTAGTTAGAAATTTTG+AGG + chr4.1:34244442-34244461 None:intergenic 25.0%
!! TGATAATGTGCTACTAAATA+TGG + chr4.1:34243802-34243821 None:intergenic 25.0%
!!! AACTTTTTCATAATGTGTGT+AGG - chr4.1:34244752-34244771 MS.gene056365:CDS 25.0%
!!! AGTGGTTCATTTGATTTTAT+TGG - chr4.1:34244177-34244196 MS.gene056365:CDS 25.0%
!!! ATTTGTAACGCTTTTTCATT+GGG - chr4.1:34243444-34243463 MS.gene056365:intron 25.0%
AAAAGATATCAAAAGCTCTC+AGG - chr4.1:34245093-34245112 MS.gene056365:CDS 30.0%
AACACTTACATTTAGACCAA+TGG + chr4.1:34244415-34244434 None:intergenic 30.0%
AGATATAAAGTAGGCCAAAT+GGG + chr4.1:34244305-34244324 None:intergenic 30.0%
AGCAAATCACTTTCATATCA+TGG - chr4.1:34244625-34244644 MS.gene056365:CDS 30.0%
AGTTTACAAAAGAGCAATCA+AGG - chr4.1:34244148-34244167 MS.gene056365:CDS 30.0%
GAACTTTGCTTCAAAACATT+TGG - chr4.1:34243637-34243656 MS.gene056365:intron 30.0%
GTCTATTTCACTTTCTTTCA+TGG - chr4.1:34244914-34244933 MS.gene056365:CDS 30.0%
TAGACAACAAGAGAGAAAAT+AGG + chr4.1:34242923-34242942 None:intergenic 30.0%
TAGATATAAAGTAGGCCAAA+TGG + chr4.1:34244306-34244325 None:intergenic 30.0%
TATCATGAAGGATATGAACT+TGG - chr4.1:34243217-34243236 MS.gene056365:CDS 30.0%
TATCCTCAAAAAATCAGTGA+TGG - chr4.1:34243140-34243159 MS.gene056365:intron 30.0%
TCTTCTGCATATCAATATGA+AGG - chr4.1:34243062-34243081 MS.gene056365:CDS 30.0%
TGCAAATAGGTTCATTGAAT+AGG - chr4.1:34243003-34243022 MS.gene056365:CDS 30.0%
TTATAGGTTTATGGATCCTT+TGG - chr4.1:34244071-34244090 MS.gene056365:intron 30.0%
TTGGAGATAGAGTAAAACAT+TGG - chr4.1:34243656-34243675 MS.gene056365:intron 30.0%
TTTCCAGAAGGATTCATATT+TGG - chr4.1:34243032-34243051 MS.gene056365:CDS 30.0%
! AAAATCAGTGATGGAAACAA+TGG - chr4.1:34243149-34243168 MS.gene056365:intron 30.0%
! AATAGGAAAGATTTTCCAGA+AGG - chr4.1:34243020-34243039 MS.gene056365:CDS 30.0%
! ATGTGCTACTAAATATGGTT+CGG + chr4.1:34243797-34243816 None:intergenic 30.0%
! CATACAGATTTTCCATATCT+TGG - chr4.1:34243243-34243262 MS.gene056365:CDS 30.0%
! CTTTGTTGGACAATTTTGAA+TGG - chr4.1:34245013-34245032 MS.gene056365:CDS 30.0%
! GACAATTTTGAATGGCATAA+GGG - chr4.1:34245021-34245040 MS.gene056365:CDS 30.0%
! GATTGCTCTTTTGTAAACTT+TGG + chr4.1:34244147-34244166 None:intergenic 30.0%
! TTTTAATGTAAATACAGGGC+TGG - chr4.1:34244961-34244980 MS.gene056365:CDS 30.0%
!! CAATGAAAAAGCGTTACAAA+TGG + chr4.1:34243445-34243464 None:intergenic 30.0%
!!! CATTTGTAACGCTTTTTCAT+TGG - chr4.1:34243443-34243462 MS.gene056365:intron 30.0%
!!! GTTTTTTGGATAATCTCCAT+TGG + chr4.1:34244097-34244116 None:intergenic 30.0%
!!! TTTCCATCACTGATTTTTTG+AGG + chr4.1:34243146-34243165 None:intergenic 30.0%
AAACTGCAGAAAAGATTTCC+AGG - chr4.1:34243606-34243625 MS.gene056365:intron 35.0%
AAGGGTTATACTGTGAGATT+TGG - chr4.1:34245039-34245058 MS.gene056365:CDS 35.0%
ACACTAGAAGATGAATATGG+CGG - chr4.1:34243478-34243497 MS.gene056365:CDS 35.0%
AGTGAATCTGTTAGATAGCT+AGG + chr4.1:34244261-34244280 None:intergenic 35.0%
AGTGGAGGAATTAATCAAGA+AGG - chr4.1:34243293-34243312 MS.gene056365:intron 35.0%
ATACTTTGCATGGTCTTTGT+TGG - chr4.1:34244999-34245018 MS.gene056365:CDS 35.0%
ATCACTTGAGGAATCACTTA+TGG - chr4.1:34244802-34244821 MS.gene056365:CDS 35.0%
ATGTAAAGGGATACTTTGCA+TGG - chr4.1:34244989-34245008 MS.gene056365:CDS 35.0%
ATTTCCAGGTTGCTTCAAAT+TGG - chr4.1:34244511-34244530 MS.gene056365:intron 35.0%
CAACAACCTCATCAATGAAT+TGG - chr4.1:34243328-34243347 MS.gene056365:intron 35.0%
CAGACACTAGAAGATGAATA+TGG - chr4.1:34243475-34243494 MS.gene056365:CDS 35.0%
CTACAGACTTTATGTTTGGA+TGG - chr4.1:34243965-34243984 MS.gene056365:CDS 35.0%
GAGTATTCTAGACCAAGATA+TGG + chr4.1:34243258-34243277 None:intergenic 35.0%
TATTCATCTTCTAGTGTCTG+AGG + chr4.1:34243475-34243494 None:intergenic 35.0%
TGATCCATCATTATCACTTG+AGG - chr4.1:34244790-34244809 MS.gene056365:CDS 35.0%
TGGTAACCTTGTTCTTACTA+AGG + chr4.1:34244127-34244146 None:intergenic 35.0%
TTCAATGAACCTATTTGCAG+TGG + chr4.1:34243002-34243021 None:intergenic 35.0%
! ATCAATGAATTGGTGGCAAA+TGG - chr4.1:34243338-34243357 MS.gene056365:intron 35.0%
! GATTCCTCAAGTGATAATGA+TGG + chr4.1:34244797-34244816 None:intergenic 35.0%
! GGACAATTTTGAATGGCATA+AGG - chr4.1:34245020-34245039 MS.gene056365:CDS 35.0%
! TTTTCATGTAAGCACCCATT+TGG - chr4.1:34244288-34244307 MS.gene056365:CDS 35.0%
!! GTGAAAGTATCCCATATACT+TGG + chr4.1:34243113-34243132 None:intergenic 35.0%
!! TCAAGTTTGTTATCTGAGAG+TGG + chr4.1:34243925-34243944 None:intergenic 35.0%
!!! ACTAAGGCTCTCATGTTTTT+TGG + chr4.1:34244111-34244130 None:intergenic 35.0%
AGAAAGTCTCGAATTGCTCT+TGG + chr4.1:34244549-34244568 None:intergenic 40.0%
AGTCAAGATGGGTATGCAAA+TGG - chr4.1:34243706-34243725 MS.gene056365:intron 40.0%
ATCAAAAGCTCTCAGGATTG+TGG - chr4.1:34245100-34245119 MS.gene056365:CDS 40.0%
CAACCTCATCAATGAATTGG+TGG - chr4.1:34243331-34243350 MS.gene056365:intron 40.0%
CATCGATACAAGGAAGATGT+TGG - chr4.1:34243194-34243213 MS.gene056365:intron 40.0%
CATGGACTTACAGTCAAGAT+GGG - chr4.1:34243695-34243714 MS.gene056365:intron 40.0%
CGAGCTACAGACTTTATGTT+TGG - chr4.1:34243961-34243980 MS.gene056365:CDS 40.0%
GATGCACCTCAATTAAGCAA+TGG - chr4.1:34244231-34244250 MS.gene056365:CDS 40.0%
GGAAGATGTTGGTATCATGA+AGG - chr4.1:34243205-34243224 MS.gene056365:CDS 40.0%
GGATAACTTTGAATGAGCCA+TGG - chr4.1:34243677-34243696 MS.gene056365:intron 40.0%
GGGTGTGATAGGTATAACAT+TGG - chr4.1:34243882-34243901 MS.gene056365:CDS 40.0%
GGTTTGCCATTGCTTAATTG+AGG + chr4.1:34244240-34244259 None:intergenic 40.0%
GTATCACTCACATGATGAGT+GGG + chr4.1:34243513-34243532 None:intergenic 40.0%
GTGCCAAATATGAATCCTTC+TGG + chr4.1:34243038-34243057 None:intergenic 40.0%
TGACTCGTATCATCGATACA+AGG - chr4.1:34243184-34243203 MS.gene056365:intron 40.0%
TGAGAGCCTTAGTAAGAACA+AGG - chr4.1:34244118-34244137 MS.gene056365:CDS 40.0%
TGGAAGAGGACCAAGTATAT+GGG - chr4.1:34243100-34243119 MS.gene056365:intron 40.0%
TGGGTATGCAAATGGTGAAA+TGG - chr4.1:34243714-34243733 MS.gene056365:intron 40.0%
TGGTTGAATCCAAATTGCAC+CGG - chr4.1:34243757-34243776 MS.gene056365:intron 40.0%
TGTATCACTCACATGATGAG+TGG + chr4.1:34243514-34243533 None:intergenic 40.0%
TTGCCACCAATTCATTGATG+AGG + chr4.1:34243337-34243356 None:intergenic 40.0%
TTTATGGATCCTTTGGCCAA+TGG - chr4.1:34244078-34244097 MS.gene056365:intron 40.0%
! ACAACCAATTTGAAGCAACC+TGG + chr4.1:34244518-34244537 None:intergenic 40.0%
! AGGGCTGGTGTAAATGTAAA+GGG - chr4.1:34244976-34244995 MS.gene056365:CDS 40.0%
! ATCTCTCAAAAGGGTGTGAT+AGG - chr4.1:34243871-34243890 MS.gene056365:CDS 40.0%
! GAACGTGATGGAAAAACCAT+TGG - chr4.1:34244396-34244415 MS.gene056365:CDS 40.0%
! TGAATTGGTGGCAAATGGTA+AGG - chr4.1:34243343-34243362 MS.gene056365:intron 40.0%
AACACTGCACCACTGCAAAT+AGG - chr4.1:34242990-34243009 MS.gene056365:CDS 45.0%
AACCAAGAAGAACATCGACC+TGG + chr4.1:34243742-34243761 None:intergenic 45.0%
AGCAAAGTTCTGCATAGTCC+TGG + chr4.1:34243627-34243646 None:intergenic 45.0%
ATAAAGCCTTCTCGTGTCAC+AGG - chr4.1:34243412-34243431 MS.gene056365:intron 45.0%
CCATCTTGACTGTAAGTCCA+TGG + chr4.1:34243697-34243716 None:intergenic 45.0%
CCATGGACTTACAGTCAAGA+TGG - chr4.1:34243694-34243713 MS.gene056365:intron 45.0%
CTCCACTTAGTTTCCCATCT+GGG + chr4.1:34243280-34243299 None:intergenic 45.0%
GGATAATCTCCATTGGCCAA+AGG + chr4.1:34244090-34244109 None:intergenic 45.0%
GTGGAAGAGGACCAAGTATA+TGG - chr4.1:34243099-34243118 MS.gene056365:intron 45.0%
TGGAAACAATGGAGACGTTG+CGG - chr4.1:34243160-34243179 MS.gene056365:intron 45.0%
TGTAAACCTGTGACACGAGA+AGG + chr4.1:34243421-34243440 None:intergenic 45.0%
TTGAATCCAAATTGCACCGG+TGG - chr4.1:34243760-34243779 MS.gene056365:intron 45.0%
! CAGGGCTGGTGTAAATGTAA+AGG - chr4.1:34244975-34244994 MS.gene056365:CDS 45.0%
! GGTCTAGAATACTCCCAGAT+GGG - chr4.1:34243264-34243283 MS.gene056365:CDS 45.0%
! TATGAAGGTGCAGCAAGTGA+AGG - chr4.1:34243077-34243096 MS.gene056365:CDS 45.0%
! TGGTCTAGAATACTCCCAGA+TGG - chr4.1:34243263-34243282 MS.gene056365:CDS 45.0%
CACCAGGTCGATGTTCTTCT+TGG - chr4.1:34243737-34243756 MS.gene056365:intron 50.0%
CCAGATGGGAAACTAAGTGG+AGG - chr4.1:34243278-34243297 MS.gene056365:CDS 50.0%
CCTCCACTTAGTTTCCCATC+TGG + chr4.1:34243281-34243300 None:intergenic 50.0%
CTCCCAGATGGGAAACTAAG+TGG - chr4.1:34243275-34243294 MS.gene056365:CDS 50.0%
GAATCACCACCGGTGCAATT+TGG + chr4.1:34243769-34243788 None:intergenic 50.0%
GAGCAATCAAGGCTAGTGAG+TGG - chr4.1:34244159-34244178 MS.gene056365:CDS 50.0%
GCAAATGGTGAAATGGCACC+AGG - chr4.1:34243721-34243740 MS.gene056365:intron 50.0%
GTGATTGCAGTCGAACGTGA+TGG - chr4.1:34244384-34244403 MS.gene056365:CDS 50.0%
TTCGGTTCCAGAATCACCAC+CGG + chr4.1:34243779-34243798 None:intergenic 50.0%
! AATTGCACCGGTGGTGATTC+TGG - chr4.1:34243769-34243788 MS.gene056365:intron 50.0%
GCAGCAAGTGAAGGTGGAAG+AGG - chr4.1:34243086-34243105 MS.gene056365:CDS 55.0%
! GAAGGTGCAGCAAGTGAAGG+TGG - chr4.1:34243080-34243099 MS.gene056365:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 34242909 34245176 34242909 ID=MS.gene056365
chr4.1 mRNA 34242909 34245176 34242909 ID=MS.gene056365.t1;Parent=MS.gene056365
chr4.1 exon 34244726 34245176 34244726 ID=MS.gene056365.t1.exon1;Parent=MS.gene056365.t1
chr4.1 CDS 34244726 34245176 34244726 ID=cds.MS.gene056365.t1;Parent=MS.gene056365.t1
chr4.1 exon 34244564 34244651 34244564 ID=MS.gene056365.t1.exon2;Parent=MS.gene056365.t1
chr4.1 CDS 34244564 34244651 34244564 ID=cds.MS.gene056365.t1;Parent=MS.gene056365.t1
chr4.1 exon 34244099 34244470 34244099 ID=MS.gene056365.t1.exon3;Parent=MS.gene056365.t1
chr4.1 CDS 34244099 34244470 34244099 ID=cds.MS.gene056365.t1;Parent=MS.gene056365.t1
chr4.1 exon 34243791 34244008 34243791 ID=MS.gene056365.t1.exon4;Parent=MS.gene056365.t1
chr4.1 CDS 34243791 34244008 34243791 ID=cds.MS.gene056365.t1;Parent=MS.gene056365.t1
chr4.1 exon 34243660 34243691 34243660 ID=MS.gene056365.t1.exon5;Parent=MS.gene056365.t1
chr4.1 CDS 34243660 34243691 34243660 ID=cds.MS.gene056365.t1;Parent=MS.gene056365.t1
chr4.1 exon 34243464 34243566 34243464 ID=MS.gene056365.t1.exon6;Parent=MS.gene056365.t1
chr4.1 CDS 34243464 34243566 34243464 ID=cds.MS.gene056365.t1;Parent=MS.gene056365.t1
chr4.1 exon 34243203 34243311 34243203 ID=MS.gene056365.t1.exon7;Parent=MS.gene056365.t1
chr4.1 CDS 34243203 34243311 34243203 ID=cds.MS.gene056365.t1;Parent=MS.gene056365.t1
chr4.1 exon 34242909 34243107 34242909 ID=MS.gene056365.t1.exon8;Parent=MS.gene056365.t1
chr4.1 CDS 34242909 34243107 34242909 ID=cds.MS.gene056365.t1;Parent=MS.gene056365.t1
Gene Sequence

>MS.gene056365

ATGAGATATTTCCTATTTTCTCTCTTGTTGTCTATAGTTTCAACATTCATTATTACTTTAACAGAAGGTCAAGAAATAATTAACACTGCACCACTGCAAATAGGTTCATTGAATAGGAAAGATTTTCCAGAAGGATTCATATTTGGCACAGCATCTTCTGCATATCAATATGAAGGTGCAGCAAGTGAAGGTGGAAGAGGACCAAGTATATGGGATACTTTCACTCATAGATATCCTCAAAAAATCAGTGATGGAAACAATGGAGACGTTGCGGTTGACTCGTATCATCGATACAAGGAAGATGTTGGTATCATGAAGGATATGAACTTGGATGCATACAGATTTTCCATATCTTGGTCTAGAATACTCCCAGATGGGAAACTAAGTGGAGGAATTAATCAAGAAGGAATCGACTATTACAACAACCTCATCAATGAATTGGTGGCAAATGGTAAGGATACAAACTTCATTTTCAATTATGCTGTGCATTTTAGCATCTTCTAATAAAGCCTTCTCGTGTCACAGGTTTACAACCATTTGTAACGCTTTTTCATTGGGATCTTCCTCAGACACTAGAAGATGAATATGGCGGTTTCTTAAGCCCACTCATCATGTGAGTGATACAATTTCAAACTTTCAGTTAATAACTTAGTTTAAATATTTGTGGAAATGTTTCTCATTCATCTTCACATACTTTAAACTGCAGAAAAGATTTCCAGGACTATGCAGAACTTTGCTTCAAAACATTTGGAGATAGAGTAAAACATTGGATAACTTTGAATGAGCCATGGACTTACAGTCAAGATGGGTATGCAAATGGTGAAATGGCACCAGGTCGATGTTCTTCTTGGTTGAATCCAAATTGCACCGGTGGTGATTCTGGAACCGAACCATATTTAGTAGCACATTATCAACTTCTAGCTCATGCAGCAGTTGTTAATTTATACAAGACAAAGTATCAAATCTCTCAAAAGGGTGTGATAGGTATAACATTGGTCATAAACTATTTTGTGCCACTCTCAGATAACAAACTTGATATAAAGGCTGCTGAACGAGCTACAGACTTTATGTTTGGATGGTAAGTTCATTACAAAGATAGATTAAGCTTATATAACTATACTATCCAAATTAACTATAAAGCTTATTCGATTTCTTTGTTTAATTATAGGTTTATGGATCCTTTGGCCAATGGAGATTATCCAAAAAACATGAGAGCCTTAGTAAGAACAAGGTTACCAAAGTTTACAAAAGAGCAATCAAGGCTAGTGAGTGGTTCATTTGATTTTATTGGCATAAATTACTACTCTTCATGTTATGCTTCTGATGCACCTCAATTAAGCAATGGCAAACCTAGCTATCTAACAGATTCACTTTCTCGTTTTTCATGTAAGCACCCATTTGGCCTACTTTATATCTATTGATTATTTAAGTTATATATTATAAATTTAAATTAATGGTGTGCATTTTTTGTGTGTGTGATTGCAGTCGAACGTGATGGAAAAACCATTGGTCTAAATGTAAGTGTTCAACCCTCAAAATTTCTAACTACTTACCTGTTATTTTGTTTTGTCTAAATCAGTAATTAATGAATTTGGTTATTTTATTTCCAGGTTGCTTCAAATTGGTTGTATGTTTATCCAAGAGCAATTCGAGACTTTCTCATACAAGTTAAAGAAAAATACAACAACCCTTTAATTTATATTACTGAAAATGGTAAGCAAATCACTTTCATATCATGGTTTTTCTTCTTTAAATAGATAAAGTTATAGTTAAAAACTATTTAATTTAGATAATATAAATTTCTATATGAGATTTTTTATTTTATTACTCATGAATATAACTCAACTTTTTCATAATGTGTGTAGGTATTAATGAGTACGATGATCCATCATTATCACTTGAGGAATCACTTATGGATACTTATAGAGTTGATTATCATTATCGTCATTTATTCTATCTTAATGAGGCAATCAAGTGAGTAAATTTTTGATATATCTAAAGATCAGTCTATTTCACTTTCTTTCATGGAATTTAGCTAAACTATTTTCTTTCTTTTAATGTAAATACAGGGCTGGTGTAAATGTAAAGGGATACTTTGCATGGTCTTTGTTGGACAATTTTGAATGGCATAAGGGTTATACTGTGAGATTTGGAATGACATTTGTAGATTACAAAAATGGTTTGAAAAGATATCAAAAGCTCTCAGGATTGTGGTTCAAGAATTTTCTCACTTCAGAGAACAAAAAAGTTTACATAGATTCCATTTAA

Protein sequence

>MS.gene056365.t1

MRYFLFSLLLSIVSTFIITLTEGQEIINTAPLQIGSLNRKDFPEGFIFGTASSAYQYEGAASEGGRGPSIWDTFTHRYPQKISDGNNGDVAVDSYHRYKEDVGIMKDMNLDAYRFSISWSRILPDGKLSGGINQEGIDYYNNLINELVANGLQPFVTLFHWDLPQTLEDEYGGFLSPLIIKDFQDYAELCFKTFGDRVKHWITLNEPWTYSQDGYANGEMAPGRCSSWLNPNCTGGDSGTEPYLVAHYQLLAHAAVVNLYKTKYQISQKGVIGITLVINYFVPLSDNKLDIKAAERATDFMFGWFMDPLANGDYPKNMRALVRTRLPKFTKEQSRLVSGSFDFIGINYYSSCYASDAPQLSNGKPSYLTDSLSRFSFERDGKTIGLNVASNWLYVYPRAIRDFLIQVKEKYNNPLIYITENGINEYDDPSLSLEESLMDTYRVDYHYRHLFYLNEAIKAGVNVKGYFAWSLLDNFEWHKGYTVRFGMTFVDYKNGLKRYQKLSGLWFKNFLTSENKKVYIDSI