Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34901.t1 | RHN42417.1 | 96.6 | 535 | 18 | 0 | 1 | 535 | 1 | 535 | 2.40E-291 | 1010.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34901.t1 | O80505 | 70.9 | 502 | 128 | 1 | 31 | 532 | 22 | 505 | 7.3e-212 | 738.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34901.t1 | A0A396GUX5 | 96.6 | 535 | 18 | 0 | 1 | 535 | 1 | 535 | 1.7e-291 | 1010.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050111 | MS.gene34901 | 0.845889 | 3.06E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene34901 | MS.gene070560 | PPI |
| MS.gene34901 | MS.gene032882 | PPI |
| MS.gene34901 | MS.gene55207 | PPI |
| MS.gene34901 | MS.gene77418 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34901.t1 | MTR_5g077540 | 93.084 | 535 | 17 | 1 | 1 | 535 | 1 | 515 | 0.0 | 1001 |
| MS.gene34901.t1 | MTR_6g017315 | 30.677 | 251 | 152 | 7 | 43 | 277 | 67 | 311 | 2.20e-25 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34901.t1 | AT2G44660 | 69.615 | 520 | 140 | 1 | 13 | 532 | 4 | 505 | 0.0 | 728 |
| MS.gene34901.t1 | AT5G38460 | 26.234 | 385 | 227 | 12 | 43 | 409 | 72 | 417 | 7.49e-25 | 108 |
| MS.gene34901.t1 | AT5G38460 | 26.234 | 385 | 227 | 12 | 43 | 409 | 72 | 417 | 7.49e-25 | 108 |
Find 121 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGATTTGTCTCTTCTTTA+TGG | 0.059585 | 4.1:+15863433 | MS.gene34901:CDS |
| GTTGATTTCACTTTCGTATT+TGG | 0.171552 | 4.1:+15863588 | MS.gene34901:CDS |
| CTGATTTGTCTCTTCTTTAT+GGG | 0.190540 | 4.1:+15863434 | MS.gene34901:CDS |
| TTATAGACTTACTAGGAATT+TGG | 0.215734 | 4.1:+15863459 | MS.gene34901:CDS |
| CTTTAGTCGACTCTTGATTA+TGG | 0.218008 | 4.1:+15863744 | MS.gene34901:CDS |
| TGTTGGGGTGGAATTGTAAA+AGG | 0.236657 | 4.1:+15863721 | MS.gene34901:CDS |
| GCAGTGTTTGCATCCGCATT+TGG | 0.260423 | 4.1:+15863781 | MS.gene34901:CDS |
| ACCCGAGGTAGAACACTAAA+AGG | 0.263152 | 4.1:-15864849 | None:intergenic |
| AACTACCTTTAGATTCAAAT+TGG | 0.264867 | 4.1:-15867205 | None:intergenic |
| CGAGAAAGCAAAAGTTGATT+TGG | 0.269970 | 4.1:+15863485 | MS.gene34901:CDS |
| TGATTTGGTCGTTGGTTATT+TGG | 0.291950 | 4.1:+15863500 | MS.gene34901:CDS |
| AGTGCGGATGTGAGGAATAA+TGG | 0.296933 | 4.1:+15867230 | MS.gene34901:CDS |
| GTCTTGTAGTTGTAGAGATA+TGG | 0.316331 | 4.1:+15867291 | MS.gene34901:CDS |
| AAAATATGACAGTAAATCTT+TGG | 0.322386 | 4.1:-15863411 | None:intergenic |
| CAGTGTTTGCATCCGCATTT+GGG | 0.337345 | 4.1:+15863782 | MS.gene34901:CDS |
| TCCATCCGTGACATTTATAA+TGG | 0.338338 | 4.1:+15866167 | MS.gene34901:CDS |
| CAATACAATGGATTTCTCAT+TGG | 0.356779 | 4.1:+15863559 | MS.gene34901:CDS |
| AATACAATGGATTTCTCATT+GGG | 0.357750 | 4.1:+15863560 | MS.gene34901:CDS |
| TTTGTTGAGGCACTATTGTT+GGG | 0.365288 | 4.1:+15863705 | MS.gene34901:CDS |
| CTTGATTGAGAAGATATATC+TGG | 0.366761 | 4.1:+15867265 | MS.gene34901:CDS |
| TTTAGTCGACTCTTGATTAT+GGG | 0.371488 | 4.1:+15863745 | MS.gene34901:CDS |
| ATTTGTTGAGGCACTATTGT+TGG | 0.375498 | 4.1:+15863704 | MS.gene34901:CDS |
| AACGATTGTTTCCATTTGGC+AGG | 0.385919 | 4.1:+15864679 | MS.gene34901:CDS |
| CTAGTAATCCTTTGTGGCCG+TGG | 0.386080 | 4.1:-15866234 | None:intergenic |
| AAAGCCAGACCACATCAAAA+TGG | 0.393622 | 4.1:-15867117 | None:intergenic |
| TCCTAAAATAGTGCACCTTC+AGG | 0.394307 | 4.1:+15863351 | MS.gene34901:CDS |
| TGAATGAAGCTGCTGGTGTC+TGG | 0.395897 | 4.1:-15864800 | None:intergenic |
| ATCTCTGTATACTGTGCTCT+GGG | 0.396880 | 4.1:+15867374 | MS.gene34901:CDS |
| GGGGCTTTGCCATGCATACT+GGG | 0.398330 | 4.1:+15864701 | MS.gene34901:CDS |
| GCCTTCCTACTCAGAAAACT+TGG | 0.399995 | 4.1:+15864768 | MS.gene34901:CDS |
| GATCTCTGTATACTGTGCTC+TGG | 0.401154 | 4.1:+15867373 | MS.gene34901:CDS |
| GGATCATGTACTCTTGGATA+TGG | 0.409280 | 4.1:+15867396 | MS.gene34901:CDS |
| CTCTGGGGATCATGTACTCT+TGG | 0.411393 | 4.1:+15867390 | MS.gene34901:CDS |
| TCTTGTAGTTGTAGAGATAT+GGG | 0.420668 | 4.1:+15867292 | MS.gene34901:CDS |
| ATCCAACGATTGTTTCCATT+TGG | 0.422788 | 4.1:+15864675 | MS.gene34901:CDS |
| AGGCGAGTGGAATTACAAAA+TGG | 0.425510 | 4.1:-15866323 | None:intergenic |
| ACTTTGAGGTGCACCGCAAT+TGG | 0.429070 | 4.1:+15863200 | MS.gene34901:CDS |
| CAATGAGAAATCCATTGTAT+TGG | 0.430292 | 4.1:-15863558 | None:intergenic |
| ATGGGGTTTATAGACTTACT+AGG | 0.435029 | 4.1:+15863452 | MS.gene34901:CDS |
| GAGGAAGGAAGGGATTTGTT+AGG | 0.443108 | 4.1:+15863610 | MS.gene34901:CDS |
| GCAAAAGTTGATTTGGTCGT+TGG | 0.444287 | 4.1:+15863492 | MS.gene34901:CDS |
| TTACCGTAGTACAGACTTTG+AGG | 0.448967 | 4.1:+15863186 | MS.gene34901:CDS |
| AAGTTAATGAGATTTAACTA+TGG | 0.453461 | 4.1:-15867429 | None:intergenic |
| TCATTCACTGCAGGGCTAGT+AGG | 0.458683 | 4.1:+15864816 | MS.gene34901:CDS |
| CGGGGTTTGTGCTGCAACAA+AGG | 0.460841 | 4.1:-15866343 | None:intergenic |
| TTTGAATTATAGCTCGAATA+CGG | 0.465209 | 4.1:+15863378 | MS.gene34901:CDS |
| TGAGGTGCACCGCAATTGGC+TGG | 0.473857 | 4.1:+15863204 | MS.gene34901:CDS |
| TACTACGGTAAGACGGGAAA+AGG | 0.474296 | 4.1:-15863174 | None:intergenic |
| ATCCATCTAGTAATCCTTTG+TGG | 0.486113 | 4.1:-15866240 | None:intergenic |
| CCCGAGGTAGAACACTAAAA+GGG | 0.487237 | 4.1:-15864848 | None:intergenic |
| TGATTTGTCTCTTCTTTATG+GGG | 0.493698 | 4.1:+15863435 | MS.gene34901:CDS |
| GTAGCCCGAAAACGACTCTC+TGG | 0.496588 | 4.1:+15863116 | MS.gene34901:CDS |
| GCTGGCCAATTTGAATCTAA+AGG | 0.503438 | 4.1:+15867200 | MS.gene34901:CDS |
| GGCCACAAAGGATTACTAGA+TGG | 0.508254 | 4.1:+15866238 | MS.gene34901:CDS |
| TCAAAGTACCACTGTGAAAG+AGG | 0.509216 | 4.1:-15863244 | None:intergenic |
| GATTTCACTTTCGTATTTGG+AGG | 0.509283 | 4.1:+15863591 | MS.gene34901:CDS |
| CCAGCAGCTTCATTCACTGC+AGG | 0.510812 | 4.1:+15864807 | MS.gene34901:CDS |
| CTTGAAAAGACAAGGAGATA+AGG | 0.519768 | 4.1:-15866199 | None:intergenic |
| AGTATACAGAGATCAACATA+AGG | 0.521972 | 4.1:-15867364 | None:intergenic |
| TTTCGTATTTGGAGGAAGGA+AGG | 0.523282 | 4.1:+15863599 | MS.gene34901:CDS |
| GTATACAGAGATCAACATAA+GGG | 0.524262 | 4.1:-15867363 | None:intergenic |
| CGATTGTTTCCATTTGGCAG+GGG | 0.535880 | 4.1:+15864681 | MS.gene34901:CDS |
| CGAAATATGCAAAGAACGGC+GGG | 0.536379 | 4.1:-15863294 | None:intergenic |
| TTCGTATTTGGAGGAAGGAA+GGG | 0.537577 | 4.1:+15863600 | MS.gene34901:CDS |
| CCTTCCTACTCAGAAAACTT+GGG | 0.538732 | 4.1:+15864769 | MS.gene34901:CDS |
| TCATATTTACCTGTCCAAGA+TGG | 0.540706 | 4.1:-15863813 | None:intergenic |
| TTGAGGCACTATTGTTGGGG+TGG | 0.542164 | 4.1:+15863709 | MS.gene34901:CDS |
| ACGATTGTTTCCATTTGGCA+GGG | 0.544994 | 4.1:+15864680 | MS.gene34901:CDS |
| CTTTGTTGCAGCACAAACCC+CGG | 0.552369 | 4.1:+15866344 | MS.gene34901:CDS |
| TCAAGGCTTGGAAGAATCCA+CGG | 0.552385 | 4.1:+15866217 | MS.gene34901:CDS |
| CTTTAAACATTTATTTGCAG+TGG | 0.553524 | 4.1:+15863660 | MS.gene34901:CDS |
| TCACTTTCGTATTTGGAGGA+AGG | 0.558171 | 4.1:+15863595 | MS.gene34901:CDS |
| AGTACCACTGTGAAAGAGGA+AGG | 0.563847 | 4.1:-15863240 | None:intergenic |
| GTAATCTAGAGTCCACGGAC+TGG | 0.564381 | 4.1:-15863272 | None:intergenic |
| CATGTGCATTTCCAATACAA+TGG | 0.568701 | 4.1:+15863547 | MS.gene34901:CDS |
| AGTCTGTACTACGGTAAGAC+GGG | 0.568977 | 4.1:-15863180 | None:intergenic |
| GATTGTTTCCATTTGGCAGG+GGG | 0.570965 | 4.1:+15864682 | MS.gene34901:CDS |
| AATTTGGGGCCCAGTATGCA+TGG | 0.572693 | 4.1:-15864710 | None:intergenic |
| AAGTCTGTACTACGGTAAGA+CGG | 0.576605 | 4.1:-15863181 | None:intergenic |
| GGAAGAATCCACGGCCACAA+AGG | 0.577318 | 4.1:+15866226 | MS.gene34901:CDS |
| TGCCAAATGGAAACAATCGT+TGG | 0.579040 | 4.1:-15864677 | None:intergenic |
| AGTCGACTCTTGATTATGGG+AGG | 0.581077 | 4.1:+15863748 | MS.gene34901:CDS |
| GTAGTTTAAGTGCGGATGTG+AGG | 0.581167 | 4.1:+15867222 | MS.gene34901:CDS |
| GAAGGAAGGGATTTGTTAGG+TGG | 0.581280 | 4.1:+15863613 | MS.gene34901:CDS |
| TCTTGTGCCTCAAAGAGTAG+TGG | 0.581614 | 4.1:-15867059 | None:intergenic |
| TTCCAAGCCTTGAAAAGACA+AGG | 0.583599 | 4.1:-15866207 | None:intergenic |
| TTGTTGAGGCACTATTGTTG+GGG | 0.588162 | 4.1:+15863706 | MS.gene34901:CDS |
| ACCATTATAAATGTCACGGA+TGG | 0.588372 | 4.1:-15866168 | None:intergenic |
| ATTGAGAAGATATATCTGGT+TGG | 0.589564 | 4.1:+15867269 | MS.gene34901:CDS |
| CATTGTATTGGAAATGCACA+TGG | 0.594864 | 4.1:-15863546 | None:intergenic |
| TAAAATAGTGCACCTTCAGG+AGG | 0.595849 | 4.1:+15863354 | MS.gene34901:CDS |
| CCTGCAGTGAATGAAGCTGC+TGG | 0.597285 | 4.1:-15864807 | None:intergenic |
| AACAAATAAACAAAATACAC+AGG | 0.600934 | 4.1:-15863688 | None:intergenic |
| CAGAACCATTATAAATGTCA+CGG | 0.604638 | 4.1:-15866172 | None:intergenic |
| TGGGTGGCATGTGCATGAGA+AGG | 0.606139 | 4.1:+15866293 | MS.gene34901:CDS |
| TGGTCCACTATTAAAAGCAT+CGG | 0.614371 | 4.1:-15863526 | None:intergenic |
| ATCTAAAGGTAGTTTAAGTG+CGG | 0.614446 | 4.1:+15867214 | MS.gene34901:CDS |
| GGCGGGTAATCTAGAGTCCA+CGG | 0.622748 | 4.1:-15863277 | None:intergenic |
| TTCTATATCATGTCAGACAA+AGG | 0.623344 | 4.1:+15864741 | MS.gene34901:CDS |
| AGCTTATCACCCAAAAGCAG+AGG | 0.625011 | 4.1:-15867329 | None:intergenic |
| AAAATAGTGCACCTTCAGGA+GGG | 0.628508 | 4.1:+15863355 | MS.gene34901:CDS |
| GAATTATAGCTCGAATACGG+CGG | 0.631955 | 4.1:+15863381 | MS.gene34901:CDS |
| CGTTCGAAATATGCAAAGAA+CGG | 0.633662 | 4.1:-15863298 | None:intergenic |
| TCGAAATATGCAAAGAACGG+CGG | 0.641556 | 4.1:-15863295 | None:intergenic |
| CAGCAGCTTCATTCACTGCA+GGG | 0.642240 | 4.1:+15864808 | MS.gene34901:CDS |
| TATAATTCAAACCCTCCTGA+AGG | 0.642863 | 4.1:-15863366 | None:intergenic |
| CCGAGGTAGAACACTAAAAG+GGG | 0.647722 | 4.1:-15864847 | None:intergenic |
| CTTGTAGTTGTAGAGATATG+GGG | 0.647851 | 4.1:+15867293 | MS.gene34901:CDS |
| GCCCGAAAACGACTCTCTGG+TGG | 0.648251 | 4.1:+15863119 | MS.gene34901:CDS |
| GTGTCAATGCCAGCCAATTG+CGG | 0.652158 | 4.1:-15863213 | None:intergenic |
| ATATCATATGCGTATACCTG+TGG | 0.657422 | 4.1:+15866261 | MS.gene34901:CDS |
| AGGTAGAACACTAAAAGGGG+AGG | 0.659639 | 4.1:-15864844 | None:intergenic |
| GTACCACTGTGAAAGAGGAA+GGG | 0.661428 | 4.1:-15863239 | None:intergenic |
| GCACCTCAAAGTCTGTACTA+CGG | 0.663739 | 4.1:-15863189 | None:intergenic |
| TATACAGAGATCAACATAAG+GGG | 0.666217 | 4.1:-15867362 | None:intergenic |
| GCTTATCACCCAAAAGCAGA+GGG | 0.668480 | 4.1:-15867328 | None:intergenic |
| TGTGCTGCAACAAAGGCGAG+TGG | 0.681218 | 4.1:-15866336 | None:intergenic |
| ACTTTGACGAGACCAGTCCG+TGG | 0.701251 | 4.1:+15863260 | MS.gene34901:CDS |
| TGTTGCAGCACAAACCCCGG+AGG | 0.712015 | 4.1:+15866347 | MS.gene34901:CDS |
| ATTCCCTTCCTCTTTCACAG+TGG | 0.716197 | 4.1:+15863236 | MS.gene34901:CDS |
| TCTCTGTATACTGTGCTCTG+GGG | 0.735758 | 4.1:+15867375 | MS.gene34901:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAGTTTAATAGAAAAA+TGG | - | chr4.1:15866646-15866665 | None:intergenic | 10.0% |
| !!! | AGATTCTTATTTTTATTTTT+GGG | + | chr4.1:15866609-15866628 | MS.gene34901:intron | 10.0% |
| !!! | TAGATTCTTATTTTTATTTT+TGG | + | chr4.1:15866608-15866627 | MS.gene34901:intron | 10.0% |
| !!! | TTTATTTTAATAATTGGTTA+TGG | - | chr4.1:15866558-15866577 | None:intergenic | 10.0% |
| !! | CCAATTATTAAAATAAAGTT+TGG | + | chr4.1:15866561-15866580 | MS.gene34901:intron | 15.0% |
| !! | CTTCTTCAAAAAAAAAAAAA+AGG | + | chr4.1:15865711-15865730 | MS.gene34901:intron | 15.0% |
| !! | GATAATAACTTAAAATTAGT+TGG | + | chr4.1:15866824-15866843 | MS.gene34901:intron | 15.0% |
| !! | GTGAAATATTATGTTATAAT+AGG | + | chr4.1:15865571-15865590 | MS.gene34901:intron | 15.0% |
| !! | GTGAAATATTATGTTATAAT+TGG | + | chr4.1:15865571-15865590 | MS.gene34901:intron | 15.0% |
| !! | TCATCATAACAAATATTTAT+CGG | - | chr4.1:15866946-15866965 | None:intergenic | 15.0% |
| !!! | ACTAATTTTAAGTTATTATC+AGG | - | chr4.1:15866824-15866843 | None:intergenic | 15.0% |
| !!! | CCAAACTTTATTTTAATAAT+TGG | - | chr4.1:15866564-15866583 | None:intergenic | 15.0% |
| !!! | TAAATCTATATTTCTATTCT+TGG | - | chr4.1:15865182-15865201 | None:intergenic | 15.0% |
| !!! | TTTATCAATGTTTCTATTTT+TGG | - | chr4.1:15865422-15865441 | None:intergenic | 15.0% |
| !!! | TTTTACATTTTACACATTTT+TGG | + | chr4.1:15865756-15865775 | MS.gene34901:intron | 15.0% |
| !! | AAAATATGACAGTAAATCTT+TGG | - | chr4.1:15863414-15863433 | None:intergenic | 20.0% |
| !! | AACAAATAAACAAAATACAC+AGG | - | chr4.1:15863691-15863710 | None:intergenic | 20.0% |
| !! | AATATAAATGTTCAAATGAC+AGG | + | chr4.1:15865496-15865515 | MS.gene34901:intron | 20.0% |
| !! | ATCACTTTAATAAGATCATA+AGG | - | chr4.1:15866709-15866728 | None:intergenic | 20.0% |
| !! | GAAGAAAAAGATAACATTAT+AGG | - | chr4.1:15866437-15866456 | None:intergenic | 20.0% |
| !! | TTGTTAATTGCTAAATAGAA+AGG | + | chr4.1:15864910-15864929 | MS.gene34901:intron | 20.0% |
| !!! | ATATTTCTATTCTTGGAAAA+TGG | - | chr4.1:15865175-15865194 | None:intergenic | 20.0% |
| !!! | ATTTTCGACAAAATTATCAA+TGG | - | chr4.1:15866530-15866549 | None:intergenic | 20.0% |
| !!! | CTCATAAGGTTATTTAATTT+AGG | - | chr4.1:15864420-15864439 | None:intergenic | 20.0% |
| !!! | GATTAACTTGACAATTTTTA+TGG | + | chr4.1:15866583-15866602 | MS.gene34901:intron | 20.0% |
| !!! | TATTTCTATTCTTGGAAAAT+GGG | - | chr4.1:15865174-15865193 | None:intergenic | 20.0% |
| !!! | TGTATTTTGTTTATTTGTTG+AGG | + | chr4.1:15863692-15863711 | MS.gene34901:CDS | 20.0% |
| !!! | TTAATTTAGGTTTGTTGTTA+TGG | - | chr4.1:15864407-15864426 | None:intergenic | 20.0% |
| !!! | TTTTCGACAAAATTATCAAT+GGG | - | chr4.1:15866529-15866548 | None:intergenic | 20.0% |
| ! | AAAATTCAATCTGTATGACT+TGG | - | chr4.1:15865105-15865124 | None:intergenic | 25.0% |
| ! | AACTACCTTTAGATTCAAAT+TGG | - | chr4.1:15867208-15867227 | None:intergenic | 25.0% |
| ! | AATAAGATCATAAGGAAAGA+TGG | - | chr4.1:15866701-15866720 | None:intergenic | 25.0% |
| ! | AATACAAGAATCTAACAAGA+AGG | - | chr4.1:15864557-15864576 | None:intergenic | 25.0% |
| ! | AATGGGAATAAGAAAGTTTA+GGG | - | chr4.1:15866512-15866531 | None:intergenic | 25.0% |
| ! | ATACAAGAATCTAACAAGAA+GGG | - | chr4.1:15864556-15864575 | None:intergenic | 25.0% |
| ! | ATATAGAACACCCAAAAATT+TGG | - | chr4.1:15864729-15864748 | None:intergenic | 25.0% |
| ! | ATCAACAAAATGAGCAAAAA+TGG | - | chr4.1:15863332-15863351 | None:intergenic | 25.0% |
| ! | ATCAGATGATTCTTATTACT+TGG | + | chr4.1:15866664-15866683 | MS.gene34901:intron | 25.0% |
| ! | CATTCGTGAAACATTATAAT+TGG | + | chr4.1:15865274-15865293 | MS.gene34901:intron | 25.0% |
| ! | CTTTAAACATTTATTTGCAG+TGG | + | chr4.1:15863660-15863679 | MS.gene34901:CDS | 25.0% |
| ! | TAGTGCAAGAATTTAGAAAT+GGG | - | chr4.1:15863894-15863913 | None:intergenic | 25.0% |
| ! | TATAGAACACCCAAAAATTT+GGG | - | chr4.1:15864728-15864747 | None:intergenic | 25.0% |
| ! | TCAAGCATAATAAACGATTA+AGG | + | chr4.1:15866889-15866908 | MS.gene34901:intron | 25.0% |
| ! | TCCATAGTTAAATCTCATTA+AGG | + | chr4.1:15867428-15867447 | MS.gene34901:CDS | 25.0% |
| ! | TCCTATTTATACTTGAAATC+AGG | - | chr4.1:15864198-15864217 | None:intergenic | 25.0% |
| ! | TTAGTGCAAGAATTTAGAAA+TGG | - | chr4.1:15863895-15863914 | None:intergenic | 25.0% |
| ! | TTATAGACTTACTAGGAATT+TGG | + | chr4.1:15863459-15863478 | MS.gene34901:CDS | 25.0% |
| ! | TTTGAATTATAGCTCGAATA+CGG | + | chr4.1:15863378-15863397 | MS.gene34901:CDS | 25.0% |
| !! | AATACAATGGATTTCTCATT+GGG | + | chr4.1:15863560-15863579 | MS.gene34901:CDS | 25.0% |
| !! | ACCTGATTTCAAGTATAAAT+AGG | + | chr4.1:15864194-15864213 | MS.gene34901:intron | 25.0% |
| !! | ATTCTATTCTTTTGCAAGAA+GGG | - | chr4.1:15864982-15865001 | None:intergenic | 25.0% |
| !! | TATTCTATTCTTTTGCAAGA+AGG | - | chr4.1:15864983-15865002 | None:intergenic | 25.0% |
| !! | TGAAAAGTATAATTGCTTCT+TGG | - | chr4.1:15866919-15866938 | None:intergenic | 25.0% |
| !! | TGATAATTTTGTCGAAAATG+AGG | + | chr4.1:15866531-15866550 | MS.gene34901:intron | 25.0% |
| !! | TGTCATGCAATAATTTTATC+TGG | - | chr4.1:15864451-15864470 | None:intergenic | 25.0% |
| !!! | AGGAATAATGGTTTTGTTAT+TGG | + | chr4.1:15867242-15867261 | MS.gene34901:CDS | 25.0% |
| !!! | CATTACTTTTTGTTGTCAAT+AGG | + | chr4.1:15866378-15866397 | MS.gene34901:CDS | 25.0% |
| AACGTCAATTGAAAAGATCT+CGG | - | chr4.1:15866032-15866051 | None:intergenic | 30.0% | |
| AATCCCTATGTGAAATGATA+TGG | + | chr4.1:15864064-15864083 | MS.gene34901:intron | 30.0% | |
| AGTATACAGAGATCAACATA+AGG | - | chr4.1:15867367-15867386 | None:intergenic | 30.0% | |
| AGTGCAAGAATTTAGAAATG+GGG | - | chr4.1:15863893-15863912 | None:intergenic | 30.0% | |
| ATAGAACACCCAAAAATTTG+GGG | - | chr4.1:15864727-15864746 | None:intergenic | 30.0% | |
| ATCTAAAGGTAGTTTAAGTG+CGG | + | chr4.1:15867214-15867233 | MS.gene34901:CDS | 30.0% | |
| ATCTGGATACATAACTCATA+AGG | - | chr4.1:15864434-15864453 | None:intergenic | 30.0% | |
| ATGATGAGTGAGAATGTTTA+TGG | + | chr4.1:15866959-15866978 | MS.gene34901:intron | 30.0% | |
| ATTAAAGTGATCTTCACACA+AGG | + | chr4.1:15866718-15866737 | MS.gene34901:intron | 30.0% | |
| ATTGAGAAGATATATCTGGT+TGG | + | chr4.1:15867269-15867288 | MS.gene34901:CDS | 30.0% | |
| CAATGAGAAATCCATTGTAT+TGG | - | chr4.1:15863561-15863580 | None:intergenic | 30.0% | |
| CAATGGGAATAAGAAAGTTT+AGG | - | chr4.1:15866513-15866532 | None:intergenic | 30.0% | |
| CAGAACCATTATAAATGTCA+CGG | - | chr4.1:15866175-15866194 | None:intergenic | 30.0% | |
| CCAAAAAAATCAATTATGCG+AGG | - | chr4.1:15864620-15864639 | None:intergenic | 30.0% | |
| CGAAGATATGAAAGTTGTTT+GGG | + | chr4.1:15864349-15864368 | MS.gene34901:intron | 30.0% | |
| CTACCATATCATTTCACATA+GGG | - | chr4.1:15864070-15864089 | None:intergenic | 30.0% | |
| CTTGATTGAGAAGATATATC+TGG | + | chr4.1:15867265-15867284 | MS.gene34901:CDS | 30.0% | |
| GAAGATATGAAAGTTGTTTG+GGG | + | chr4.1:15864350-15864369 | MS.gene34901:intron | 30.0% | |
| GACGTCAATTGAATATATCT+CGG | - | chr4.1:15865798-15865817 | None:intergenic | 30.0% | |
| GATATGGTAGATGAATGTTA+AGG | + | chr4.1:15864080-15864099 | MS.gene34901:intron | 30.0% | |
| GTATACAGAGATCAACATAA+GGG | - | chr4.1:15867366-15867385 | None:intergenic | 30.0% | |
| TATAACATCTCGATCTTGTT+GGG | - | chr4.1:15865476-15865495 | None:intergenic | 30.0% | |
| TATACAGAGATCAACATAAG+GGG | - | chr4.1:15867365-15867384 | None:intergenic | 30.0% | |
| TCCTAATACTAATGAAAAGC+AGG | - | chr4.1:15865031-15865050 | None:intergenic | 30.0% | |
| TCGAAGATATGAAAGTTGTT+TGG | + | chr4.1:15864348-15864367 | MS.gene34901:intron | 30.0% | |
| TCGTGAAACATTATAATTGG+TGG | + | chr4.1:15865277-15865296 | MS.gene34901:intron | 30.0% | |
| TCTACCATATCATTTCACAT+AGG | - | chr4.1:15864071-15864090 | None:intergenic | 30.0% | |
| TCTTGTAGTTGTAGAGATAT+GGG | + | chr4.1:15867292-15867311 | MS.gene34901:CDS | 30.0% | |
| TTAAAGTGATCTTCACACAA+GGG | + | chr4.1:15866719-15866738 | MS.gene34901:intron | 30.0% | |
| TTATAACATCTCGATCTTGT+TGG | - | chr4.1:15865477-15865496 | None:intergenic | 30.0% | |
| TTCTATATCATGTCAGACAA+AGG | + | chr4.1:15864741-15864760 | MS.gene34901:CDS | 30.0% | |
| TTTATACTTGAAATCAGGTC+AGG | - | chr4.1:15864193-15864212 | None:intergenic | 30.0% | |
| ! | AAAGGAAAAAAAAGCACACA+AGG | + | chr4.1:15864928-15864947 | MS.gene34901:intron | 30.0% |
| ! | AAGGAAAAAAAAGCACACAA+GGG | + | chr4.1:15864929-15864948 | MS.gene34901:intron | 30.0% |
| ! | ATACCTGTGGTTTTCTTTTT+GGG | + | chr4.1:15866274-15866293 | MS.gene34901:CDS | 30.0% |
| ! | CAATACAATGGATTTCTCAT+TGG | + | chr4.1:15863559-15863578 | MS.gene34901:CDS | 30.0% |
| ! | CTGATTTGTCTCTTCTTTAT+GGG | + | chr4.1:15863434-15863453 | MS.gene34901:CDS | 30.0% |
| ! | CTTCCTGAAAAAAGTTTTAC+AGG | + | chr4.1:15863926-15863945 | MS.gene34901:intron | 30.0% |
| ! | GAAAAGGAGAACTTTTATAC+AGG | - | chr4.1:15863161-15863180 | None:intergenic | 30.0% |
| ! | GTTGATTTCACTTTCGTATT+TGG | + | chr4.1:15863588-15863607 | MS.gene34901:CDS | 30.0% |
| ! | TAGTTACTGAGCTTGATTTT+TGG | + | chr4.1:15865383-15865402 | MS.gene34901:intron | 30.0% |
| ! | TATACCTGTGGTTTTCTTTT+TGG | + | chr4.1:15866273-15866292 | MS.gene34901:CDS | 30.0% |
| ! | TCTGATTTGTCTCTTCTTTA+TGG | + | chr4.1:15863433-15863452 | MS.gene34901:CDS | 30.0% |
| ! | TGATTTGTCTCTTCTTTATG+GGG | + | chr4.1:15863435-15863454 | MS.gene34901:CDS | 30.0% |
| ! | TTCTATTCTTTTGCAAGAAG+GGG | - | chr4.1:15864981-15865000 | None:intergenic | 30.0% |
| ! | TTTAGTCGACTCTTGATTAT+GGG | + | chr4.1:15863745-15863764 | MS.gene34901:CDS | 30.0% |
| !! | AGCAACAACAGAATTTTGAT+AGG | - | chr4.1:15867089-15867108 | None:intergenic | 30.0% |
| !! | TCTTCGAACATTTATTTCTG+TGG | - | chr4.1:15864335-15864354 | None:intergenic | 30.0% |
| !!! | ACTCCTGTAAAACTTTTTTC+AGG | - | chr4.1:15863932-15863951 | None:intergenic | 30.0% |
| !!! | CCTCGCATAATTGATTTTTT+TGG | + | chr4.1:15864617-15864636 | MS.gene34901:intron | 30.0% |
| !!! | TATTTTGAGTTACCAACTCT+CGG | - | chr4.1:15865229-15865248 | None:intergenic | 30.0% |
| AAACAAGGGAGAAAATGGTA+TGG | - | chr4.1:15863975-15863994 | None:intergenic | 35.0% | |
| ACCATTATAAATGTCACGGA+TGG | - | chr4.1:15866171-15866190 | None:intergenic | 35.0% | |
| AGTTACATCATGACACTCTA+TGG | + | chr4.1:15864110-15864129 | MS.gene34901:intron | 35.0% | |
| ATAACATCTCGATCTTGTTG+GGG | - | chr4.1:15865475-15865494 | None:intergenic | 35.0% | |
| ATATCATATGCGTATACCTG+TGG | + | chr4.1:15866261-15866280 | MS.gene34901:CDS | 35.0% | |
| ATCACTTCTTAACATAAGCC+TGG | - | chr4.1:15865548-15865567 | None:intergenic | 35.0% | |
| ATCCAACGATTGTTTCCATT+TGG | + | chr4.1:15864675-15864694 | MS.gene34901:CDS | 35.0% | |
| ATCCATCTAGTAATCCTTTG+TGG | - | chr4.1:15866243-15866262 | None:intergenic | 35.0% | |
| ATGGGGTTTATAGACTTACT+AGG | + | chr4.1:15863452-15863471 | MS.gene34901:CDS | 35.0% | |
| CATGTGCATTTCCAATACAA+TGG | + | chr4.1:15863547-15863566 | MS.gene34901:CDS | 35.0% | |
| CATTGTATTGGAAATGCACA+TGG | - | chr4.1:15863549-15863568 | None:intergenic | 35.0% | |
| CGTTCGAAATATGCAAAGAA+CGG | - | chr4.1:15863301-15863320 | None:intergenic | 35.0% | |
| CTTGAAAAGACAAGGAGATA+AGG | - | chr4.1:15866202-15866221 | None:intergenic | 35.0% | |
| CTTGTAGTTGTAGAGATATG+GGG | + | chr4.1:15867293-15867312 | MS.gene34901:CDS | 35.0% | |
| GATTTCACTTTCGTATTTGG+AGG | + | chr4.1:15863591-15863610 | MS.gene34901:CDS | 35.0% | |
| GGGGAAACAACATCAAATAT+GGG | - | chr4.1:15863873-15863892 | None:intergenic | 35.0% | |
| GTCTTGTAGTTGTAGAGATA+TGG | + | chr4.1:15867291-15867310 | MS.gene34901:CDS | 35.0% | |
| GTGCAAGAATTTAGAAATGG+GGG | - | chr4.1:15863892-15863911 | None:intergenic | 35.0% | |
| GTTACATCATGACACTCTAT+GGG | + | chr4.1:15864111-15864130 | MS.gene34901:intron | 35.0% | |
| TAGTGGAAAAAGAGAATAGC+AGG | - | chr4.1:15867045-15867064 | None:intergenic | 35.0% | |
| TATAATTCAAACCCTCCTGA+AGG | - | chr4.1:15863369-15863388 | None:intergenic | 35.0% | |
| TATTCTTGGAAAATGGGATG+AGG | - | chr4.1:15865168-15865187 | None:intergenic | 35.0% | |
| TCATATTTACCTGTCCAAGA+TGG | - | chr4.1:15863816-15863835 | None:intergenic | 35.0% | |
| TCCATCCGTGACATTTATAA+TGG | + | chr4.1:15866167-15866186 | MS.gene34901:CDS | 35.0% | |
| TGAAAAGCAGGCAGTAAATA+AGG | - | chr4.1:15865019-15865038 | None:intergenic | 35.0% | |
| TGTAATGTCTGAGTTTGAGT+TGG | + | chr4.1:15866783-15866802 | MS.gene34901:intron | 35.0% | |
| ! | AAAGCAGAGGGTGTAAAAAT+TGG | - | chr4.1:15867319-15867338 | None:intergenic | 35.0% |
| ! | AAGTAATGTTTTGCATCCTC+CGG | - | chr4.1:15866366-15866385 | None:intergenic | 35.0% |
| ! | AAGTTCAGCAGTTTTCACTA+AGG | + | chr4.1:15864265-15864284 | MS.gene34901:intron | 35.0% |
| ! | AGAACTTGGTAGCTCAAAAT+GGG | + | chr4.1:15865520-15865539 | MS.gene34901:intron | 35.0% |
| ! | ATTTGTTGAGGCACTATTGT+TGG | + | chr4.1:15863704-15863723 | MS.gene34901:CDS | 35.0% |
| ! | ATTTTTACACCCTCTGCTTT+TGG | + | chr4.1:15867319-15867338 | MS.gene34901:CDS | 35.0% |
| ! | CGAGAAAGCAAAAGTTGATT+TGG | + | chr4.1:15863485-15863504 | MS.gene34901:CDS | 35.0% |
| ! | CTTATCTCCTTGTCTTTTCA+AGG | + | chr4.1:15866200-15866219 | MS.gene34901:CDS | 35.0% |
| ! | CTTTAGTCGACTCTTGATTA+TGG | + | chr4.1:15863744-15863763 | MS.gene34901:CDS | 35.0% |
| ! | GCTTTTTGTCATTCAAGTAC+AGG | + | chr4.1:15865869-15865888 | MS.gene34901:intron | 35.0% |
| ! | GTATTGATGTCTTGTGAAGA+GGG | + | chr4.1:15866741-15866760 | MS.gene34901:intron | 35.0% |
| ! | TAAACCCAAGTTTTCTGAGT+AGG | - | chr4.1:15864776-15864795 | None:intergenic | 35.0% |
| ! | TGGTCCACTATTAAAAGCAT+CGG | - | chr4.1:15863529-15863548 | None:intergenic | 35.0% |
| ! | TTTGTTGAGGCACTATTGTT+GGG | + | chr4.1:15863705-15863724 | MS.gene34901:CDS | 35.0% |
| !! | GCCTGCTTTTCATTAGTATT+AGG | + | chr4.1:15865027-15865046 | MS.gene34901:intron | 35.0% |
| !! | TGATTTGGTCGTTGGTTATT+TGG | + | chr4.1:15863500-15863519 | MS.gene34901:CDS | 35.0% |
| !! | TTCTTCACTCCATTTTGATG+TGG | + | chr4.1:15867108-15867127 | MS.gene34901:CDS | 35.0% |
| !! | TTTTTACACCCTCTGCTTTT+GGG | + | chr4.1:15867320-15867339 | MS.gene34901:CDS | 35.0% |
| AAAATAGTGCACCTTCAGGA+GGG | + | chr4.1:15863355-15863374 | MS.gene34901:CDS | 40.0% | |
| AAAGCCAGACCACATCAAAA+TGG | - | chr4.1:15867120-15867139 | None:intergenic | 40.0% | |
| AACGATTGTTTCCATTTGGC+AGG | + | chr4.1:15864679-15864698 | MS.gene34901:CDS | 40.0% | |
| AAGGTCTCTTGTGAATGTGT+GGG | + | chr4.1:15864284-15864303 | MS.gene34901:intron | 40.0% | |
| AAGTCTGTACTACGGTAAGA+CGG | - | chr4.1:15863184-15863203 | None:intergenic | 40.0% | |
| ACCCGATATCCACAAAACAA+GGG | - | chr4.1:15863989-15864008 | None:intergenic | 40.0% | |
| ACCTGTCCAAGATGGAAAAA+CGG | - | chr4.1:15863808-15863827 | None:intergenic | 40.0% | |
| ACGATTGTTTCCATTTGGCA+GGG | + | chr4.1:15864680-15864699 | MS.gene34901:CDS | 40.0% | |
| AGGCGAGTGGAATTACAAAA+TGG | - | chr4.1:15866326-15866345 | None:intergenic | 40.0% | |
| AGGTAGTAGAAAACCCACTT+GGG | + | chr4.1:15865591-15865610 | MS.gene34901:intron | 40.0% | |
| ATCTCTGTATACTGTGCTCT+GGG | + | chr4.1:15867374-15867393 | MS.gene34901:CDS | 40.0% | |
| ATGAACGTAAAACTTACCCG+AGG | - | chr4.1:15864867-15864886 | None:intergenic | 40.0% | |
| ATTCAAGTACAGGCAGAACT+TGG | + | chr4.1:15865879-15865898 | MS.gene34901:intron | 40.0% | |
| CAAAGTCGGTAGTTGACAAT+TGG | - | chr4.1:15864503-15864522 | None:intergenic | 40.0% | |
| CAATTGAACAGCAACATCTC+AGG | - | chr4.1:15865359-15865378 | None:intergenic | 40.0% | |
| CATGACACTCTATGGGAATA+AGG | + | chr4.1:15864118-15864137 | MS.gene34901:intron | 40.0% | |
| CATTAACCAGTCATCAAGCT+CGG | - | chr4.1:15865826-15865845 | None:intergenic | 40.0% | |
| CCACAAAACAAGGGAGAAAA+TGG | - | chr4.1:15863980-15863999 | None:intergenic | 40.0% | |
| CCTTCCTACTCAGAAAACTT+GGG | + | chr4.1:15864769-15864788 | MS.gene34901:CDS | 40.0% | |
| GAATTATAGCTCGAATACGG+CGG | + | chr4.1:15863381-15863400 | MS.gene34901:CDS | 40.0% | |
| GCTCACACAAAGAAAAAAGC+TGG | + | chr4.1:15867182-15867201 | MS.gene34901:CDS | 40.0% | |
| GCTGGCCAATTTGAATCTAA+AGG | + | chr4.1:15867200-15867219 | MS.gene34901:CDS | 40.0% | |
| GGATCATGTACTCTTGGATA+TGG | + | chr4.1:15867396-15867415 | MS.gene34901:CDS | 40.0% | |
| GGGGGAAACAACATCAAATA+TGG | - | chr4.1:15863874-15863893 | None:intergenic | 40.0% | |
| TAAAATAGTGCACCTTCAGG+AGG | + | chr4.1:15863354-15863373 | MS.gene34901:CDS | 40.0% | |
| TAAGGTCTCTTGTGAATGTG+TGG | + | chr4.1:15864283-15864302 | MS.gene34901:intron | 40.0% | |
| TACCCGATATCCACAAAACA+AGG | - | chr4.1:15863990-15864009 | None:intergenic | 40.0% | |
| TAGGTAGTAGAAAACCCACT+TGG | + | chr4.1:15865590-15865609 | MS.gene34901:intron | 40.0% | |
| TCACTTTCGTATTTGGAGGA+AGG | + | chr4.1:15863595-15863614 | MS.gene34901:CDS | 40.0% | |
| TCCTAAAATAGTGCACCTTC+AGG | + | chr4.1:15863351-15863370 | MS.gene34901:CDS | 40.0% | |
| TCGAAATATGCAAAGAACGG+CGG | - | chr4.1:15863298-15863317 | None:intergenic | 40.0% | |
| TGAAAACTGCTGAACTTGCA+GGG | - | chr4.1:15864262-15864281 | None:intergenic | 40.0% | |
| TGCCAAATGGAAACAATCGT+TGG | - | chr4.1:15864680-15864699 | None:intergenic | 40.0% | |
| TGTTGGGGTGGAATTGTAAA+AGG | + | chr4.1:15863721-15863740 | MS.gene34901:CDS | 40.0% | |
| TTACCGTAGTACAGACTTTG+AGG | + | chr4.1:15863186-15863205 | MS.gene34901:CDS | 40.0% | |
| TTCAAATGACAGGCAGAACT+TGG | + | chr4.1:15865506-15865525 | MS.gene34901:intron | 40.0% | |
| TTCCAAGCCTTGAAAAGACA+AGG | - | chr4.1:15866210-15866229 | None:intergenic | 40.0% | |
| TTCGTATTTGGAGGAAGGAA+GGG | + | chr4.1:15863600-15863619 | MS.gene34901:CDS | 40.0% | |
| TTTCGTATTTGGAGGAAGGA+AGG | + | chr4.1:15863599-15863618 | MS.gene34901:CDS | 40.0% | |
| TTTGTGGATATCGGGTATGT+CGG | + | chr4.1:15863993-15864012 | MS.gene34901:intron | 40.0% | |
| ! | AGTAATGTTTTGCATCCTCC+GGG | - | chr4.1:15866365-15866384 | None:intergenic | 40.0% |
| ! | ATACTGGGCCCCAAATTTTT+GGG | + | chr4.1:15864716-15864735 | MS.gene34901:CDS | 40.0% |
| ! | ATTCTCACCGGTGTCAATTT+AGG | + | chr4.1:15865675-15865694 | MS.gene34901:intron | 40.0% |
| ! | CAGAACTTGGTAGCTCAAAA+TGG | + | chr4.1:15865519-15865538 | MS.gene34901:intron | 40.0% |
| ! | GTCACCGATGCTTTTAATAG+TGG | + | chr4.1:15863522-15863541 | MS.gene34901:CDS | 40.0% |
| ! | TCAAAGTACCACTGTGAAAG+AGG | - | chr4.1:15863247-15863266 | None:intergenic | 40.0% |
| ! | TTCAGCACAGTTTTACGACA+GGG | + | chr4.1:15867139-15867158 | MS.gene34901:CDS | 40.0% |
| ! | TTGTTGAGGCACTATTGTTG+GGG | + | chr4.1:15863706-15863725 | MS.gene34901:CDS | 40.0% |
| ! | TTTCAGCACAGTTTTACGAC+AGG | + | chr4.1:15867138-15867157 | MS.gene34901:CDS | 40.0% |
| !! | CAATCTGTATGACTTGGTCA+TGG | - | chr4.1:15865099-15865118 | None:intergenic | 40.0% |
| !! | GCAAAAGTTGATTTGGTCGT+TGG | + | chr4.1:15863492-15863511 | MS.gene34901:CDS | 40.0% |
| !! | GGTATTGATGTCTTGTGAAG+AGG | + | chr4.1:15866740-15866759 | MS.gene34901:intron | 40.0% |
| !! | TCCTGAAGGTGCACTATTTT+AGG | - | chr4.1:15863355-15863374 | None:intergenic | 40.0% |
| !!! | CCATTTTCTCCCTTGTTTTG+TGG | + | chr4.1:15863977-15863996 | MS.gene34901:intron | 40.0% |
| !!! | CTCCCTTGTTTTGTGGATAT+CGG | + | chr4.1:15863984-15864003 | MS.gene34901:intron | 40.0% |
| !!! | TCCCTTGTTTTGTGGATATC+GGG | + | chr4.1:15863985-15864004 | MS.gene34901:intron | 40.0% |
| ACCCGAGGTAGAACACTAAA+AGG | - | chr4.1:15864852-15864871 | None:intergenic | 45.0% | |
| AGCTTATCACCCAAAAGCAG+AGG | - | chr4.1:15867332-15867351 | None:intergenic | 45.0% | |
| AGGTAGAACACTAAAAGGGG+AGG | - | chr4.1:15864847-15864866 | None:intergenic | 45.0% | |
| AGTACCACTGTGAAAGAGGA+AGG | - | chr4.1:15863243-15863262 | None:intergenic | 45.0% | |
| AGTAGAAAACCCACTTGGGT+TGG | + | chr4.1:15865595-15865614 | MS.gene34901:intron | 45.0% | |
| AGTCTGTACTACGGTAAGAC+GGG | - | chr4.1:15863183-15863202 | None:intergenic | 45.0% | |
| AGTGCGGATGTGAGGAATAA+TGG | + | chr4.1:15867230-15867249 | MS.gene34901:CDS | 45.0% | |
| ATCTTGCTCATCAGAGCATG+TGG | - | chr4.1:15864029-15864048 | None:intergenic | 45.0% | |
| ATGGAAAAACGGCCCAAATG+CGG | - | chr4.1:15863797-15863816 | None:intergenic | 45.0% | |
| ATTCCCTTCCTCTTTCACAG+TGG | + | chr4.1:15863236-15863255 | MS.gene34901:CDS | 45.0% | |
| CAGTGTTTGCATCCGCATTT+GGG | + | chr4.1:15863782-15863801 | MS.gene34901:CDS | 45.0% | |
| CCACCCAAAAAGAAAACCAC+AGG | - | chr4.1:15866280-15866299 | None:intergenic | 45.0% | |
| CCCGAGGTAGAACACTAAAA+GGG | - | chr4.1:15864851-15864870 | None:intergenic | 45.0% | |
| CCGAGGTAGAACACTAAAAG+GGG | - | chr4.1:15864850-15864869 | None:intergenic | 45.0% | |
| CGAAATATGCAAAGAACGGC+GGG | - | chr4.1:15863297-15863316 | None:intergenic | 45.0% | |
| CGATTGTTTCCATTTGGCAG+GGG | + | chr4.1:15864681-15864700 | MS.gene34901:CDS | 45.0% | |
| GATCTCTGTATACTGTGCTC+TGG | + | chr4.1:15867373-15867392 | MS.gene34901:CDS | 45.0% | |
| GATTGTTTCCATTTGGCAGG+GGG | + | chr4.1:15864682-15864701 | MS.gene34901:CDS | 45.0% | |
| GCACCTCAAAGTCTGTACTA+CGG | - | chr4.1:15863192-15863211 | None:intergenic | 45.0% | |
| GCCTTCCTACTCAGAAAACT+TGG | + | chr4.1:15864768-15864787 | MS.gene34901:CDS | 45.0% | |
| GCTTATCACCCAAAAGCAGA+GGG | - | chr4.1:15867331-15867350 | None:intergenic | 45.0% | |
| GGCCACAAAGGATTACTAGA+TGG | + | chr4.1:15866238-15866257 | MS.gene34901:CDS | 45.0% | |
| GTACCACTGTGAAAGAGGAA+GGG | - | chr4.1:15863242-15863261 | None:intergenic | 45.0% | |
| GTAGTTTAAGTGCGGATGTG+AGG | + | chr4.1:15867222-15867241 | MS.gene34901:CDS | 45.0% | |
| GTGAAAACTGCTGAACTTGC+AGG | - | chr4.1:15864263-15864282 | None:intergenic | 45.0% | |
| TACTACGGTAAGACGGGAAA+AGG | - | chr4.1:15863177-15863196 | None:intergenic | 45.0% | |
| TAGCGCACCTAAATTGACAC+CGG | - | chr4.1:15865685-15865704 | None:intergenic | 45.0% | |
| TCAAGGCTTGGAAGAATCCA+CGG | + | chr4.1:15866217-15866236 | MS.gene34901:CDS | 45.0% | |
| TCTCTGTATACTGTGCTCTG+GGG | + | chr4.1:15867375-15867394 | MS.gene34901:CDS | 45.0% | |
| ! | AGTCGACTCTTGATTATGGG+AGG | + | chr4.1:15863748-15863767 | MS.gene34901:CDS | 45.0% |
| ! | CATACTGGGCCCCAAATTTT+TGG | + | chr4.1:15864715-15864734 | MS.gene34901:CDS | 45.0% |
| ! | CCCAAGTTTTCTGAGTAGGA+AGG | - | chr4.1:15864772-15864791 | None:intergenic | 45.0% |
| ! | CCCCTTTTAGTGTTCTACCT+CGG | + | chr4.1:15864847-15864866 | MS.gene34901:CDS | 45.0% |
| ! | CCCTTTTAGTGTTCTACCTC+GGG | + | chr4.1:15864848-15864867 | MS.gene34901:CDS | 45.0% |
| ! | GAGGAAGGAAGGGATTTGTT+AGG | + | chr4.1:15863610-15863629 | MS.gene34901:CDS | 45.0% |
| ! | GTAATGTTTTGCATCCTCCG+GGG | - | chr4.1:15866364-15866383 | None:intergenic | 45.0% |
| ! | TCGCAACTGAGCTTGATAAC+TGG | + | chr4.1:15866051-15866070 | MS.gene34901:intron | 45.0% |
| !! | AACCACCAGAGAGTCGTTTT+CGG | - | chr4.1:15863124-15863143 | None:intergenic | 45.0% |
| !! | CACTCCATTTTGATGTGGTC+TGG | + | chr4.1:15867113-15867132 | MS.gene34901:CDS | 45.0% |
| !! | CCTGTGGTTTTCTTTTTGGG+TGG | + | chr4.1:15866277-15866296 | MS.gene34901:CDS | 45.0% |
| !! | CTCCTTGTCTTTTCAAGGCT+TGG | + | chr4.1:15866205-15866224 | MS.gene34901:CDS | 45.0% |
| !! | GAAGGAAGGGATTTGTTAGG+TGG | + | chr4.1:15863613-15863632 | MS.gene34901:CDS | 45.0% |
| !!! | TTTGGGCCGTTTTTCCATCT+TGG | + | chr4.1:15863799-15863818 | MS.gene34901:CDS | 45.0% |
| !! | TTCATATTAAATAAAAAAAA+CGG | - | chr4.1:15866459-15866478 | None:intergenic | 5.0% |
| ATCTCGGAAGTCACAACAGC+TGG | - | chr4.1:15866016-15866035 | None:intergenic | 50.0% | |
| ATCTCGGAAGTTGCAACAGC+TGG | - | chr4.1:15865782-15865801 | None:intergenic | 50.0% | |
| CAGCAGCTTCATTCACTGCA+GGG | + | chr4.1:15864808-15864827 | MS.gene34901:CDS | 50.0% | |
| CGCACATGAGCATGCAAAGT+CGG | - | chr4.1:15864517-15864536 | None:intergenic | 50.0% | |
| CTAGTAATCCTTTGTGGCCG+TGG | - | chr4.1:15866237-15866256 | None:intergenic | 50.0% | |
| CTTTGTTGCAGCACAAACCC+CGG | + | chr4.1:15866344-15866363 | MS.gene34901:CDS | 50.0% | |
| GCAGTGTTTGCATCCGCATT+TGG | + | chr4.1:15863781-15863800 | MS.gene34901:CDS | 50.0% | |
| GGTAGCTCAAAATGAGCACC+AGG | + | chr4.1:15865900-15865919 | MS.gene34901:intron | 50.0% | |
| GTCTCAGGTTCGATTCTCAC+CGG | + | chr4.1:15865663-15865682 | MS.gene34901:intron | 50.0% | |
| GTGTCAATGCCAGCCAATTG+CGG | - | chr4.1:15863216-15863235 | None:intergenic | 50.0% | |
| TGAATGAAGCTGCTGGTGTC+TGG | - | chr4.1:15864803-15864822 | None:intergenic | 50.0% | |
| TTGCTCATCAGAGCATGTGG+AGG | - | chr4.1:15864026-15864045 | None:intergenic | 50.0% | |
| ! | AATTTGGGGCCCAGTATGCA+TGG | - | chr4.1:15864713-15864732 | None:intergenic | 50.0% |
| ! | CAACATCTCAGGCGTTGCAA+TGG | - | chr4.1:15865348-15865367 | None:intergenic | 50.0% |
| ! | CTCTGGGGATCATGTACTCT+TGG | + | chr4.1:15867390-15867409 | MS.gene34901:CDS | 50.0% |
| ! | GTAATCTAGAGTCCACGGAC+TGG | - | chr4.1:15863275-15863294 | None:intergenic | 50.0% |
| ! | TCATTCACTGCAGGGCTAGT+AGG | + | chr4.1:15864816-15864835 | MS.gene34901:CDS | 50.0% |
| ! | TTGAGGCACTATTGTTGGGG+TGG | + | chr4.1:15863709-15863728 | MS.gene34901:CDS | 50.0% |
| !! | ACCACCAGAGAGTCGTTTTC+GGG | - | chr4.1:15863123-15863142 | None:intergenic | 50.0% |
| !! | ACTTTGAGGTGCACCGCAAT+TGG | + | chr4.1:15863200-15863219 | MS.gene34901:CDS | 50.0% |
| !! | TGGCCTAGTGGTATTGGCTT+GGG | + | chr4.1:15865615-15865634 | MS.gene34901:intron | 50.0% |
| !! | TTGGCCTAGTGGTATTGGCT+TGG | + | chr4.1:15865614-15865633 | MS.gene34901:intron | 50.0% |
| !! | TTGGGTTGGCCTAGTGGTAT+TGG | + | chr4.1:15865609-15865628 | MS.gene34901:intron | 50.0% |
| !!! | GCCGTTTTTCCATCTTGGAC+AGG | + | chr4.1:15863804-15863823 | MS.gene34901:CDS | 50.0% |
| ACCACTAGGCCAACCCAAGT+GGG | - | chr4.1:15865607-15865626 | None:intergenic | 55.0% | |
| ACTTTGACGAGACCAGTCCG+TGG | + | chr4.1:15863260-15863279 | MS.gene34901:CDS | 55.0% | |
| CCAGCAGCTTCATTCACTGC+AGG | + | chr4.1:15864807-15864826 | MS.gene34901:CDS | 55.0% | |
| CCTGCAGTGAATGAAGCTGC+TGG | - | chr4.1:15864810-15864829 | None:intergenic | 55.0% | |
| CGGGGTTTGTGCTGCAACAA+AGG | - | chr4.1:15866346-15866365 | None:intergenic | 55.0% | |
| GAATCGAACCTGAGACCTCG+AGG | - | chr4.1:15865659-15865678 | None:intergenic | 55.0% | |
| GGAAGAATCCACGGCCACAA+AGG | + | chr4.1:15866226-15866245 | MS.gene34901:CDS | 55.0% | |
| GGGGCTTTGCCATGCATACT+GGG | + | chr4.1:15864701-15864720 | MS.gene34901:CDS | 55.0% | |
| GGTAGCTCAAAATGGGCACC+AGG | + | chr4.1:15865527-15865546 | MS.gene34901:intron | 55.0% | |
| GGTCCCAAGCCAATACCACT+AGG | - | chr4.1:15865621-15865640 | None:intergenic | 55.0% | |
| GTAGCCCGAAAACGACTCTC+TGG | + | chr4.1:15863116-15863135 | MS.gene34901:CDS | 55.0% | |
| TACCACTAGGCCAACCCAAG+TGG | - | chr4.1:15865608-15865627 | None:intergenic | 55.0% | |
| TGGGTGGCATGTGCATGAGA+AGG | + | chr4.1:15866293-15866312 | MS.gene34901:CDS | 55.0% | |
| TGTGCTGCAACAAAGGCGAG+TGG | - | chr4.1:15866339-15866358 | None:intergenic | 55.0% | |
| ! | CTGCAACCGAGCTTGATGAC+TGG | + | chr4.1:15865817-15865836 | MS.gene34901:intron | 55.0% |
| ! | GGCGGGTAATCTAGAGTCCA+CGG | - | chr4.1:15863280-15863299 | None:intergenic | 55.0% |
| !! | AGTGGTATTGGCTTGGGACC+TGG | + | chr4.1:15865621-15865640 | MS.gene34901:intron | 55.0% |
| !! | GTGGTATTGGCTTGGGACCT+GGG | + | chr4.1:15865622-15865641 | MS.gene34901:intron | 55.0% |
| GCCCGAAAACGACTCTCTGG+TGG | + | chr4.1:15863119-15863138 | MS.gene34901:CDS | 60.0% | |
| GGGGGCTTTGCCATGCATAC+TGG | + | chr4.1:15864700-15864719 | MS.gene34901:CDS | 60.0% | |
| GTCACATCGCAGCCGAGAGT+TGG | + | chr4.1:15865214-15865233 | MS.gene34901:intron | 60.0% | |
| TCGAACCTGAGACCTCGAGG+AGG | - | chr4.1:15865656-15865675 | None:intergenic | 60.0% | |
| TGAGGTGCACCGCAATTGGC+TGG | + | chr4.1:15863204-15863223 | MS.gene34901:CDS | 60.0% | |
| TGGCAAAGCCCCCTGCCAAA+TGG | - | chr4.1:15864693-15864712 | None:intergenic | 60.0% | |
| TGTTGCAGCACAAACCCCGG+AGG | + | chr4.1:15866347-15866366 | MS.gene34901:CDS | 60.0% | |
| !! | ACCCACTTGGGTTGGCCTAG+TGG | + | chr4.1:15865603-15865622 | MS.gene34901:intron | 60.0% |
| GTGCTCCTCCTCGAGGTCTC+AGG | + | chr4.1:15865648-15865667 | MS.gene34901:intron | 65.0% | |
| ! | TCGAGGAGGAGCACACTCCC+AGG | - | chr4.1:15865642-15865661 | None:intergenic | 65.0% |
| ! | TGGGAGTGTGCTCCTCCTCG+AGG | + | chr4.1:15865641-15865660 | MS.gene34901:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 15863073 | 15867448 | 15863073 | ID=MS.gene34901 |
| chr4.1 | mRNA | 15863073 | 15867448 | 15863073 | ID=MS.gene34901.t1;Parent=MS.gene34901 |
| chr4.1 | exon | 15863073 | 15863825 | 15863073 | ID=MS.gene34901.t1.exon1;Parent=MS.gene34901.t1 |
| chr4.1 | CDS | 15863073 | 15863825 | 15863073 | ID=cds.MS.gene34901.t1;Parent=MS.gene34901.t1 |
| chr4.1 | exon | 15864663 | 15864869 | 15864663 | ID=MS.gene34901.t1.exon2;Parent=MS.gene34901.t1 |
| chr4.1 | CDS | 15864663 | 15864869 | 15864663 | ID=cds.MS.gene34901.t1;Parent=MS.gene34901.t1 |
| chr4.1 | exon | 15866162 | 15866399 | 15866162 | ID=MS.gene34901.t1.exon3;Parent=MS.gene34901.t1 |
| chr4.1 | CDS | 15866162 | 15866399 | 15866162 | ID=cds.MS.gene34901.t1;Parent=MS.gene34901.t1 |
| chr4.1 | exon | 15867039 | 15867448 | 15867039 | ID=MS.gene34901.t1.exon4;Parent=MS.gene34901.t1 |
| chr4.1 | CDS | 15867039 | 15867448 | 15867039 | ID=cds.MS.gene34901.t1;Parent=MS.gene34901.t1 |
| Gene Sequence |
| Protein sequence |
