AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35270.t1 MTR_5g029100 97.708 349 8 0 1 349 1 349 0.0 719
MS.gene35270.t1 MTR_5g029100 97.464 276 7 0 74 349 43 318 0.0 573
MS.gene35270.t1 MTR_8g090100 63.000 300 102 5 26 322 5 298 4.78e-136 390
MS.gene35270.t1 MTR_1g033420 56.782 317 130 4 17 332 9 319 1.07e-128 372
MS.gene35270.t1 MTR_8g064180 44.444 306 143 5 22 305 10 310 8.19e-85 259
MS.gene35270.t1 MTR_4g057450 40.074 272 148 5 37 305 45 304 4.17e-66 211
MS.gene35270.t1 MTR_8g013055 39.326 267 151 5 40 305 29 285 2.33e-64 206
MS.gene35270.t1 MTR_1g063020 37.748 302 163 5 17 305 5 294 2.88e-63 203
MS.gene35270.t1 MTR_7g084750 35.764 288 168 6 25 305 10 287 1.47e-61 199
MS.gene35270.t1 MTR_7g102260 36.577 298 163 6 23 306 7 292 5.13e-61 197
MS.gene35270.t1 MTR_2g095800 36.667 300 167 5 18 305 21 309 6.35e-61 197
MS.gene35270.t1 MTR_7g084770 36.610 295 169 6 20 306 4 288 2.31e-60 196
MS.gene35270.t1 MTR_7g084760 36.271 295 170 6 20 306 4 288 5.57e-60 195
MS.gene35270.t1 MTR_4g097700 38.406 276 158 6 32 305 59 324 2.13e-58 192
MS.gene35270.t1 MTR_1g105495 35.974 303 176 7 19 311 6 300 3.61e-58 190
MS.gene35270.t1 MTR_4g097640 37.979 287 164 7 21 305 13 287 9.09e-58 189
MS.gene35270.t1 MTR_4g097670 37.979 287 164 7 21 305 13 287 9.09e-58 189
MS.gene35270.t1 MTR_6g033085 35.986 289 168 6 24 305 9 287 2.06e-57 188
MS.gene35270.t1 MTR_6g033055 35.640 289 169 6 24 305 9 287 2.09e-56 186
MS.gene35270.t1 MTR_4g045853 36.789 299 168 9 14 305 4 288 6.83e-56 184
MS.gene35270.t1 MTR_2g089140 37.450 251 147 5 60 305 41 286 1.87e-54 181
MS.gene35270.t1 MTR_5g091730 36.897 290 161 8 19 305 8 278 5.55e-52 174
MS.gene35270.t1 MTR_3g089540 37.218 266 152 6 42 305 30 282 7.37e-52 174
MS.gene35270.t1 MTR_1g105900 33.779 299 181 8 15 307 6 293 7.92e-52 174
MS.gene35270.t1 MTR_4g126920 36.264 273 161 7 38 307 21 283 1.15e-50 171
MS.gene35270.t1 MTR_4g128400 34.354 294 171 7 15 305 9 283 3.62e-49 167
MS.gene35270.t1 MTR_7g056090 33.096 281 175 6 14 294 6 273 6.37e-48 163
MS.gene35270.t1 MTR_2g049130 32.246 276 172 6 19 292 6 268 1.29e-47 162
MS.gene35270.t1 MTR_2g089140 37.168 226 132 5 85 305 3 223 1.63e-47 160
MS.gene35270.t1 MTR_4g128410 34.247 292 177 8 19 307 3 282 1.14e-46 160
MS.gene35270.t1 MTR_3g084630 34.586 266 156 6 42 305 28 277 1.19e-46 160
MS.gene35270.t1 MTR_3g084620 32.982 285 173 6 23 305 9 277 1.28e-46 160
MS.gene35270.t1 MTR_7g093530 35.115 262 156 7 50 308 32 282 1.58e-46 159
MS.gene35270.t1 MTR_6g088320 34.828 290 176 7 20 305 3 283 2.44e-46 159
MS.gene35270.t1 MTR_2g038860 33.099 284 182 5 24 305 9 286 7.92e-46 158
MS.gene35270.t1 MTR_2g038705 33.099 284 182 5 24 305 9 286 7.92e-46 158
MS.gene35270.t1 MTR_2g049030 30.717 293 183 8 19 309 6 280 7.95e-46 158
MS.gene35270.t1 MTR_4g128570 33.099 284 164 7 24 305 13 272 1.16e-45 157
MS.gene35270.t1 MTR_4g128580 34.328 268 164 7 42 305 26 285 2.52e-45 157
MS.gene35270.t1 MTR_8g081040 33.564 289 172 8 22 306 10 282 8.08e-45 155
MS.gene35270.t1 MTR_8g102220 34.586 266 136 8 57 318 41 272 8.77e-42 147
MS.gene35270.t1 MTR_4g128590 30.337 267 163 5 42 306 31 276 7.31e-41 145
MS.gene35270.t1 MTR_8g102910 34.008 247 155 5 61 305 39 279 8.59e-41 145
MS.gene35270.t1 MTR_8g032640 33.523 176 109 4 62 237 31 198 2.34e-17 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35270.t1 AT1G32170 70.032 317 92 2 12 327 1 315 8.65e-166 466
MS.gene35270.t1 AT4G18990 65.781 301 94 1 36 327 34 334 4.94e-149 424
MS.gene35270.t1 AT1G14720 52.108 332 152 2 17 345 3 330 7.08e-127 367
MS.gene35270.t1 AT2G01850 55.418 323 136 3 27 345 13 331 1.10e-126 367
MS.gene35270.t1 AT4G18990 64.655 232 73 1 107 329 31 262 1.49e-112 329
MS.gene35270.t1 AT1G10550 43.273 275 149 3 37 306 38 310 8.15e-83 254
MS.gene35270.t1 AT4G13090 40.816 294 164 5 14 305 3 288 6.79e-75 233
MS.gene35270.t1 AT4G13080 37.288 295 166 6 18 305 9 291 3.65e-68 216
MS.gene35270.t1 AT3G25050 40.824 267 147 5 40 305 33 289 4.89e-66 210
MS.gene35270.t1 AT2G06850 36.177 293 168 6 22 305 8 290 2.77e-63 203
MS.gene35270.t1 AT3G44990 40.074 272 148 4 37 305 34 293 5.44e-63 202
MS.gene35270.t1 AT5G13870 36.940 268 157 5 40 305 30 287 5.62e-63 202
MS.gene35270.t1 AT5G13870 36.940 268 157 5 40 305 30 287 5.62e-63 202
MS.gene35270.t1 AT5G13870 36.940 268 157 5 40 305 30 287 5.62e-63 202
MS.gene35270.t1 AT2G36870 37.500 304 160 6 18 305 8 297 2.23e-62 201
MS.gene35270.t1 AT5G65730 37.762 286 166 6 22 305 15 290 7.86e-62 199
MS.gene35270.t1 AT1G11545 36.395 294 174 6 23 309 16 303 1.02e-59 194
MS.gene35270.t1 AT4G37800 38.346 266 154 5 42 306 34 290 3.90e-59 192
MS.gene35270.t1 AT2G06850 38.983 236 132 5 72 305 5 230 6.13e-57 185
MS.gene35270.t1 AT4G03210 37.751 249 147 4 59 306 44 285 1.40e-54 181
MS.gene35270.t1 AT3G23730 36.268 284 168 7 25 305 13 286 3.17e-54 180
MS.gene35270.t1 AT5G57550 36.486 296 161 9 20 305 4 282 9.09e-53 176
MS.gene35270.t1 AT4G14130 35.739 291 171 8 18 305 7 284 5.21e-51 171
MS.gene35270.t1 AT4G28850 36.567 268 147 8 45 306 38 288 7.22e-51 171
MS.gene35270.t1 AT4G03210 37.607 234 138 4 74 306 31 257 3.16e-50 169
MS.gene35270.t1 AT4G25810 36.434 258 154 6 50 305 34 283 1.94e-49 167
MS.gene35270.t1 AT4G30270 33.449 287 163 7 22 305 4 265 3.15e-49 166
MS.gene35270.t1 AT4G30290 34.028 288 173 7 22 306 4 277 1.16e-48 165
MS.gene35270.t1 AT5G57560 34.146 287 176 7 21 305 6 281 1.82e-48 165
MS.gene35270.t1 AT5G48070 32.639 288 177 7 22 306 9 282 2.48e-48 164
MS.gene35270.t1 AT2G14620 32.765 293 181 7 19 307 16 296 6.56e-48 164
MS.gene35270.t1 AT5G57540 33.333 276 156 6 42 307 26 283 2.37e-47 162
MS.gene35270.t1 AT4G30280 34.028 288 173 7 22 306 9 282 6.50e-47 160
MS.gene35270.t1 AT5G57530 33.096 281 160 6 37 307 22 284 7.27e-47 160
MS.gene35270.t1 AT2G18800 35.036 274 163 6 42 305 28 296 2.17e-46 160
MS.gene35270.t1 AT2G14620 33.891 239 144 6 73 307 18 246 7.19e-43 149
MS.gene35270.t1 AT1G65310 34.749 259 152 7 50 305 37 281 8.91e-43 150
MS.gene35270.t1 AT1G65310 34.749 259 152 7 50 305 59 303 1.89e-42 149
MS.gene35270.t1 AT4G25820 32.472 271 165 6 42 307 30 287 2.49e-42 149
MS.gene35270.t1 AT2G14620 34.361 227 135 6 85 307 19 235 1.91e-41 145
MS.gene35270.t1 AT3G48580 33.469 245 134 9 64 305 55 273 1.60e-34 128
MS.gene35270.t1 AT2G36870 38.728 173 90 3 18 176 8 178 2.30e-33 122
MS.gene35270.t1 AT3G48580 33.333 237 129 9 72 305 4 214 1.89e-32 121
MS.gene35270.t1 AT3G48580 28.980 245 125 10 64 305 55 253 5.75e-21 91.3

Find 103 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTAACACCTCCCTAAT+TGG 0.183555 5.4:-19451682 None:intergenic
TGAAAATAGGAAATGAGTTT+TGG 0.219960 5.4:-19448804 None:intergenic
CCATATGGGATGCGTCAAAT+TGG 0.227070 5.4:+19451755 MS.gene35270:CDS
ACATTGATGAAGTTCCAATT+AGG 0.258577 5.4:+19451668 MS.gene35270:CDS
CTTATTGCTATGATACAATT+AGG 0.266532 5.4:+19452004 MS.gene35270:CDS
ATCATAGATATAGTATTCTT+TGG 0.274047 5.4:+19449811 MS.gene35270:CDS
GAGACCGGAAGGTTGAAATT+TGG 0.287257 5.4:+19452084 MS.gene35270:CDS
TATCTATGATATCCTTTAGT+TGG 0.291592 5.4:-19449798 None:intergenic
TCCTCCAAATTTCAACCTTC+CGG 0.294246 5.4:-19452088 None:intergenic
TTACACTCTGGTGGTGGTAT+AGG 0.295113 5.4:-19452030 None:intergenic
GTGAGGAGCGTTATCGTCTT+TGG 0.319973 5.4:+19449769 MS.gene35270:CDS
GAGCTTCAAGATGGACGTTT+TGG 0.327938 5.4:-19451909 None:intergenic
CAAACAAACTTGTATGGAAA+TGG 0.345202 5.4:+19449729 MS.gene35270:CDS
CATTGATGAAGTTCCAATTA+GGG 0.352975 5.4:+19451669 MS.gene35270:CDS
CGCATTGCGAGGCGGCGCAT+GGG 0.354309 5.4:-19451952 None:intergenic
TACACTCTGGTGGTGGTATA+GGG 0.364239 5.4:-19452029 None:intergenic
GGTGTTAAGAAGTGAGGAAA+TGG 0.365576 5.4:+19451693 MS.gene35270:CDS
TCGCATTGCGAGGCGGCGCA+TGG 0.371340 5.4:-19451953 None:intergenic
TACAATGACATTGGCTTGAC+CGG 0.372711 5.4:-19451727 None:intergenic
GAAGCCACCGCCGACATTCT+AGG 0.376340 5.4:+19452109 MS.gene35270:CDS
TGTCATTGTATGCGACCATA+TGG 0.384464 5.4:+19451740 MS.gene35270:CDS
GGGTCGGATACTTCTTGAAT+TGG 0.394064 5.4:-19451871 None:intergenic
CGGTTTCAAACAAACTTGTA+TGG 0.402069 5.4:+19449723 MS.gene35270:CDS
CCAATTTGACGCATCCCATA+TGG 0.424089 5.4:-19451755 None:intergenic
TGGAAATGGAAGCACTCATC+GGG 0.426018 5.4:+19449743 MS.gene35270:CDS
ATCTATGATATCCTTTAGTT+GGG 0.431534 5.4:-19449797 None:intergenic
TTAAATCTTTGTTTCTCCGC+TGG 0.456783 5.4:-19452060 None:intergenic
CATATGGGATGCGTCAAATT+GGG 0.461635 5.4:+19451756 MS.gene35270:CDS
GATGGTTATTCTCATCTCTT+CGG 0.463358 5.4:+19448896 MS.gene35270:CDS
ATCATACCTTACGTTGTTGT+GGG 0.467592 5.4:+19448774 MS.gene35270:CDS
GCATTGCGAGGCGGCGCATG+GGG 0.468919 5.4:-19451951 None:intergenic
CTTTGGTTCGACCCAACTAA+AGG 0.471822 5.4:+19449786 MS.gene35270:CDS
AACGTTGTTCGTTCCTCCGA+TGG 0.474311 5.4:+19448926 MS.gene35270:CDS
TTGTTATTACAGACATCAAA+CGG 0.482919 5.4:+19449630 MS.gene35270:intron
TCCTTAAATTCAACAACAAA+AGG 0.483949 5.4:-19451820 None:intergenic
GTGTTAAGAAGTGAGGAAAT+GGG 0.483994 5.4:+19451694 MS.gene35270:CDS
GCGTCAAATTGGGCAACATC+GGG 0.487694 5.4:+19451766 MS.gene35270:CDS
GCAACCATACCCTTCAATGA+TGG 0.489672 5.4:+19448878 MS.gene35270:CDS
ATGAGAATAACCATCATTGA+AGG 0.494626 5.4:-19448888 None:intergenic
CCTTGATCGGTGTCATCTAC+CGG 0.499492 5.4:-19452153 None:intergenic
CATCATACCTTACGTTGTTG+TGG 0.506997 5.4:+19448773 MS.gene35270:CDS
CATAGTCTTGAGCTTCAAGA+TGG 0.507045 5.4:-19451918 None:intergenic
AAACAAAGATTTAAAGAGAC+CGG 0.507356 5.4:+19452069 MS.gene35270:CDS
TGCGTCAAATTGGGCAACAT+CGG 0.511167 5.4:+19451765 MS.gene35270:CDS
CCCGCCTAGAATGTCGGCGG+TGG 0.511235 5.4:-19452113 None:intergenic
ACCGGAAGGTTGAAATTTGG+AGG 0.511495 5.4:+19452087 MS.gene35270:CDS
GTTCGTTCCTCCGATGGCAA+CGG 0.511531 5.4:+19448932 MS.gene35270:CDS
GAGTTCCTAGGTAACATAGC+TGG 0.516903 5.4:+19449690 MS.gene35270:CDS
TATTCTCATCTCTTCGGAGA+TGG 0.518704 5.4:+19448902 MS.gene35270:CDS
TTACCATCGAATTATACTGC+TGG 0.532109 5.4:+19449161 MS.gene35270:CDS
ATTTAAGGATCTAGTCCTCA+AGG 0.537137 5.4:+19451834 MS.gene35270:CDS
GGCGGAACCTTCGCATTGCG+AGG 0.537482 5.4:-19451963 None:intergenic
CCACCGCCGACATTCTAGGC+GGG 0.539580 5.4:+19452113 MS.gene35270:CDS
ATAACCATCATTGAAGGGTA+TGG 0.540096 5.4:-19448882 None:intergenic
TGTAACGATCGAGGAGGAGT+TGG 0.545650 5.4:-19448958 None:intergenic
TGAGAAAACTCACGATGAGT+TGG 0.546241 5.4:+19449662 MS.gene35270:CDS
TAGGGAGGTGTTAAGAAGTG+AGG 0.547833 5.4:+19451687 MS.gene35270:CDS
TCATCACATATCACCTTGAT+CGG 0.551054 5.4:-19452166 None:intergenic
CTCCTCCTCGATCGTTACAC+CGG 0.556457 5.4:+19448962 MS.gene35270:CDS
CCGGTAGATGACACCGATCA+AGG 0.556925 5.4:+19452153 MS.gene35270:CDS
TGCGCCGCCTCGCAATGCGA+AGG 0.560204 5.4:+19451956 MS.gene35270:CDS
GAGTTGGACTTTGAGTTCCT+AGG 0.560950 5.4:+19449678 MS.gene35270:CDS
CATTGAAGGGTATGGTTGCA+AGG 0.562725 5.4:-19448874 None:intergenic
GTCGGAGCAAACGTCGGGGT+CGG 0.563948 5.4:-19451887 None:intergenic
TCAAATTGGGCAACATCGGG+TGG 0.571083 5.4:+19451769 MS.gene35270:CDS
GAGTTGGACACCGTTGCCAT+CGG 0.573412 5.4:-19448942 None:intergenic
GGGTGGTCGTACTTCAACTC+CGG 0.575069 5.4:+19452134 MS.gene35270:CDS
ATGGAAATGGAAGCACTCAT+CGG 0.578071 5.4:+19449742 MS.gene35270:CDS
CACCGCCGACATTCTAGGCG+GGG 0.578126 5.4:+19452114 MS.gene35270:CDS
ACAATGACATTGGCTTGACC+GGG 0.591989 5.4:-19451726 None:intergenic
TATGTTCCCACAACAACGTA+AGG 0.595015 5.4:-19448780 None:intergenic
ATAATATTACACTCTGGTGG+TGG 0.597029 5.4:-19452036 None:intergenic
GGAACCTTCGCATTGCGAGG+CGG 0.602262 5.4:-19451960 None:intergenic
AAGTTTGTTTGAAACCGCCA+TGG 0.604401 5.4:-19449717 None:intergenic
GACCACCCCGCCTAGAATGT+CGG 0.605547 5.4:-19452119 None:intergenic
CATTGCGAGGCGGCGCATGG+GGG 0.608687 5.4:-19451950 None:intergenic
TTTAAGGATCTAGTCCTCAA+GGG 0.618061 5.4:+19451835 MS.gene35270:CDS
AAAGATTTAAAGAGACCGGA+AGG 0.620074 5.4:+19452073 MS.gene35270:CDS
TTGGACACCGTTGCCATCGG+AGG 0.624400 5.4:-19448939 None:intergenic
ATTCCAGCAGTATAATTCGA+TGG 0.624666 5.4:-19449164 None:intergenic
GTCATTGTATGCGACCATAT+GGG 0.625776 5.4:+19451741 MS.gene35270:CDS
AATTACCGGTGTAACGATCG+AGG 0.634816 5.4:-19448967 None:intergenic
TCATCAAATATGTATCAACA+TGG 0.635106 5.4:+19449116 MS.gene35270:CDS
AAGAGTAGTACATGAAACGT+TGG 0.637745 5.4:-19451984 None:intergenic
AAGCACTCATCGGGGTCGTG+AGG 0.638139 5.4:+19449752 MS.gene35270:CDS
TGAGAATAACCATCATTGAA+GGG 0.639194 5.4:-19448887 None:intergenic
CGCCGACATTCTAGGCGGGG+TGG 0.642323 5.4:+19452117 MS.gene35270:CDS
AGTAGTACATGAAACGTTGG+CGG 0.642577 5.4:-19451981 None:intergenic
GGAAATGGGAGGTGAATACC+CGG 0.642640 5.4:+19451708 MS.gene35270:CDS
GGAATAATATTACACTCTGG+TGG 0.643905 5.4:-19452039 None:intergenic
TGATGAAGTTCCAATTAGGG+AGG 0.646761 5.4:+19451672 MS.gene35270:CDS
GCTGGAATAATATTACACTC+TGG 0.647855 5.4:-19452042 None:intergenic
ATGGTCGCATACAATGACAT+TGG 0.648480 5.4:-19451736 None:intergenic
GTAACATAGCTGGAAAACCA+TGG 0.654662 5.4:+19449700 MS.gene35270:CDS
GATCAACTGAGCAACCCTTG+AGG 0.676059 5.4:-19451849 None:intergenic
AGAGTGTAATATTATTCCAG+CGG 0.676164 5.4:+19452044 MS.gene35270:CDS
CACCCCGCCTAGAATGTCGG+CGG 0.677092 5.4:-19452116 None:intergenic
GCCACCGCCGACATTCTAGG+CGG 0.701881 5.4:+19452112 MS.gene35270:CDS
TTTGGTCGGAGCAAACGTCG+GGG 0.702480 5.4:-19451891 None:intergenic
TTAAGAAGTGAGGAAATGGG+AGG 0.722839 5.4:+19451697 MS.gene35270:CDS
GGAAATGGAAGCACTCATCG+GGG 0.737525 5.4:+19449744 MS.gene35270:CDS
TACCGGTGTAACGATCGAGG+AGG 0.746595 5.4:-19448964 None:intergenic
ACATAGCTGGAAAACCATGG+CGG 0.793154 5.4:+19449703 MS.gene35270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTTAGTATATAAAATTAT+AGG + chr5.4:19450434-19450453 MS.gene35270:intron 10.0%
!! TATTTAACAAAATATTAGTA+AGG - chr5.4:19451577-19451596 None:intergenic 10.0%
!! TGATTTAATAATTTAATTAC+CGG - chr5.4:19448984-19449003 None:intergenic 10.0%
!!! TTAATATTTTATCATTTATG+TGG + chr5.4:19449308-19449327 MS.gene35270:intron 10.0%
!!! TTGAAGTTTATTTTTTATAT+AGG - chr5.4:19450394-19450413 None:intergenic 10.0%
!! AAAACATATAGAATTCTTAT+TGG - chr5.4:19450351-19450370 None:intergenic 15.0%
!! ATAGAGAAAAAAATGAAAAT+AGG - chr5.4:19448820-19448839 None:intergenic 15.0%
!! GAAAAAATAAAATCAAAAAG+AGG - chr5.4:19450483-19450502 None:intergenic 15.0%
!!! AGTATTATCCTTATTTTAAT+AGG - chr5.4:19451100-19451119 None:intergenic 15.0%
!!! ATAATTAGCCATTTTTAATT+TGG + chr5.4:19451013-19451032 MS.gene35270:intron 15.0%
!!! TAATTATACCTTTCTAAAAT+GGG - chr5.4:19450800-19450819 None:intergenic 15.0%
!!! TCTATATAAATATTTTGTGT+TGG + chr5.4:19449480-19449499 MS.gene35270:intron 15.0%
!!! TTAATTATACCTTTCTAAAA+TGG - chr5.4:19450801-19450820 None:intergenic 15.0%
!!! TTAATTTTTTATATAGGTTC+TGG + chr5.4:19449086-19449105 MS.gene35270:intron 15.0%
!!! TTATGGTTTACTTAAAATTT+TGG + chr5.4:19449909-19449928 MS.gene35270:intron 15.0%
!!! TTTTATATAGGTTACAATAT+AGG - chr5.4:19450382-19450401 None:intergenic 15.0%
!!! TTTTTTCTTCATTTTCTTTA+TGG + chr5.4:19450899-19450918 MS.gene35270:intron 15.0%
!! AAAAAAGGATCAATTATGAA+AGG - chr5.4:19449272-19449291 None:intergenic 20.0%
!! AAAATATTAGTAAGGTAAGT+AGG - chr5.4:19451569-19451588 None:intergenic 20.0%
!! AATTCATGCACAATAAATTA+AGG + chr5.4:19451348-19451367 MS.gene35270:intron 20.0%
!! ATATTTCATTTGTGTGTTTA+TGG + chr5.4:19449892-19449911 MS.gene35270:intron 20.0%
!! ATCATAGATATAGTATTCTT+TGG + chr5.4:19449811-19449830 MS.gene35270:CDS 20.0%
!! GACAATTAATATTCTACTAT+TGG - chr5.4:19449958-19449977 None:intergenic 20.0%
!! TAAGTTTACATATATTCACA+TGG - chr5.4:19451539-19451558 None:intergenic 20.0%
!! TTAGATATTAACTAATAACG+TGG + chr5.4:19450573-19450592 MS.gene35270:intron 20.0%
!!! AAAATATCAATTCTAGAGTT+TGG - chr5.4:19451050-19451069 None:intergenic 20.0%
!!! AATTATGTTTTGTTTCTTGA+AGG + chr5.4:19449029-19449048 MS.gene35270:intron 20.0%
!!! AGTATAAAACTATTTTACCA+TGG - chr5.4:19450323-19450342 None:intergenic 20.0%
!!! CAATCTTTTTGTAACAAAAA+AGG - chr5.4:19449287-19449306 None:intergenic 20.0%
!!! CCATAGTTTTTATTACTAAA+GGG + chr5.4:19450723-19450742 MS.gene35270:intron 20.0%
!!! TTAGAAAGGTATAATTAATC+TGG + chr5.4:19450803-19450822 MS.gene35270:intron 20.0%
!!! TTATTTTTCCCATTTTAGAA+AGG + chr5.4:19450789-19450808 MS.gene35270:intron 20.0%
!!! TTCTAAAATGGGAAAAATAA+TGG - chr5.4:19450789-19450808 None:intergenic 20.0%
! AAACAAAGATTTAAAGAGAC+CGG + chr5.4:19452069-19452088 MS.gene35270:CDS 25.0%
! AATTAAACTCGAAATCTAGT+TGG + chr5.4:19451495-19451514 MS.gene35270:intron 25.0%
! ACAAGCAAAGTCAATTATTA+CGG + chr5.4:19449395-19449414 MS.gene35270:intron 25.0%
! ATAAGGATAATACTAGATTG+TGG + chr5.4:19451106-19451125 MS.gene35270:intron 25.0%
! ATCTATGATATCCTTTAGTT+GGG - chr5.4:19449800-19449819 None:intergenic 25.0%
! CCCTTTAGTAATAAAAACTA+TGG - chr5.4:19450726-19450745 None:intergenic 25.0%
! CTTATTGCTATGATACAATT+AGG + chr5.4:19452004-19452023 MS.gene35270:CDS 25.0%
! GTAAGAAACAAAATTCAAGT+TGG - chr5.4:19450842-19450861 None:intergenic 25.0%
! GTAAGGTATATGAAATGAAA+CGG + chr5.4:19449563-19449582 MS.gene35270:intron 25.0%
! TAAGGATAATACTAGATTGT+GGG + chr5.4:19451107-19451126 MS.gene35270:intron 25.0%
! TATCTATGATATCCTTTAGT+TGG - chr5.4:19449801-19449820 None:intergenic 25.0%
! TCATCAAATATGTATCAACA+TGG + chr5.4:19449116-19449135 MS.gene35270:CDS 25.0%
! TCCTTAAATTCAACAACAAA+AGG - chr5.4:19451823-19451842 None:intergenic 25.0%
! TGTGAAAGCCTATTAAAATA+AGG + chr5.4:19451089-19451108 MS.gene35270:intron 25.0%
! TTTAATTAGGTGGAACTAAT+GGG - chr5.4:19451482-19451501 None:intergenic 25.0%
! TTTCTTTCCTTATGTGTTTA+TGG + chr5.4:19450499-19450518 MS.gene35270:intron 25.0%
!! AGTTAAACTTTCCTTTTACT+TGG + chr5.4:19449354-19449373 MS.gene35270:intron 25.0%
!! CTTTTGGATTTTACCATAAT+CGG + chr5.4:19450145-19450164 MS.gene35270:intron 25.0%
!! GAAAATAGGAAATGAGTTTT+GGG - chr5.4:19448806-19448825 None:intergenic 25.0%
!! GCCATAGTTTTTATTACTAA+AGG + chr5.4:19450722-19450741 MS.gene35270:intron 25.0%
!! TGAAAATAGGAAATGAGTTT+TGG - chr5.4:19448807-19448826 None:intergenic 25.0%
!! TTGTTATTACAGACATCAAA+CGG + chr5.4:19449630-19449649 MS.gene35270:intron 25.0%
!!! AAAAAGAGGACAAGTTTTAT+CGG - chr5.4:19450469-19450488 None:intergenic 25.0%
!!! ACTAGATTTCGAGTTTAATT+AGG - chr5.4:19451495-19451514 None:intergenic 25.0%
!!! TCCTTTTGTTGTTGAATTTA+AGG + chr5.4:19451819-19451838 MS.gene35270:CDS 25.0%
!!! TGCCAATTTTAATTGGATTT+TGG - chr5.4:19451297-19451316 None:intergenic 25.0%
AAAATTCTCCACCAAGTAAA+AGG - chr5.4:19449368-19449387 None:intergenic 30.0%
AACCAATCCATAAACACATA+AGG - chr5.4:19450509-19450528 None:intergenic 30.0%
AAGCCAAATAATCTAAGTTG+TGG - chr5.4:19450090-19450109 None:intergenic 30.0%
AAGGATAATACTAGATTGTG+GGG + chr5.4:19451108-19451127 MS.gene35270:intron 30.0%
ACATTGATGAAGTTCCAATT+AGG + chr5.4:19451668-19451687 MS.gene35270:CDS 30.0%
ACTAACATTCGATGAAACTT+AGG - chr5.4:19450422-19450441 None:intergenic 30.0%
ACTAGCTAGAACTTAGATAA+AGG + chr5.4:19451319-19451338 MS.gene35270:intron 30.0%
AGAGTGTAATATTATTCCAG+CGG + chr5.4:19452044-19452063 MS.gene35270:CDS 30.0%
ATATATTGAGACGCTTACTA+CGG - chr5.4:19450065-19450084 None:intergenic 30.0%
ATGAGAATAACCATCATTGA+AGG - chr5.4:19448891-19448910 None:intergenic 30.0%
CAAACAAACTTGTATGGAAA+TGG + chr5.4:19449729-19449748 MS.gene35270:CDS 30.0%
CAACTCTTCTAACATTATGT+TGG + chr5.4:19450226-19450245 MS.gene35270:intron 30.0%
CATTGATGAAGTTCCAATTA+GGG + chr5.4:19451669-19451688 MS.gene35270:CDS 30.0%
CGATTATGGTAAAATCCAAA+AGG - chr5.4:19450147-19450166 None:intergenic 30.0%
GAGAAGGACCAAATTAAAAA+TGG - chr5.4:19451024-19451043 None:intergenic 30.0%
GGCCAAAATCCAATTAAAAT+TGG + chr5.4:19451292-19451311 MS.gene35270:intron 30.0%
GTTTAATTAGGTGGAACTAA+TGG - chr5.4:19451483-19451502 None:intergenic 30.0%
TCTCCACAACTTAGATTATT+TGG + chr5.4:19450084-19450103 MS.gene35270:intron 30.0%
TGAGAATAACCATCATTGAA+GGG - chr5.4:19448890-19448909 None:intergenic 30.0%
TTCCTTATGTGTTTATGGAT+TGG + chr5.4:19450504-19450523 MS.gene35270:intron 30.0%
! AATTGACTTTGCTTGTTCTT+TGG - chr5.4:19449391-19449410 None:intergenic 30.0%
! TAAACAAAAGCACGTTAGTT+AGG + chr5.4:19451259-19451278 MS.gene35270:intron 30.0%
! TAAACTTTCCTTTTACTTGG+TGG + chr5.4:19449357-19449376 MS.gene35270:intron 30.0%
! TATTTTACCATGGCAATAAG+TGG - chr5.4:19450313-19450332 None:intergenic 30.0%
! TCATGTTTGACTTAATGTGA+GGG + chr5.4:19450618-19450637 MS.gene35270:intron 30.0%
! TTACCTCAAAGTGTTCAAAA+AGG + chr5.4:19449442-19449461 MS.gene35270:intron 30.0%
! TTCATGTTTGACTTAATGTG+AGG + chr5.4:19450617-19450636 MS.gene35270:intron 30.0%
! TTTCCTTTTTGAACACTTTG+AGG - chr5.4:19449448-19449467 None:intergenic 30.0%
! TTTTAATAGGCTTTCACATC+AGG - chr5.4:19451087-19451106 None:intergenic 30.0%
!! ACACTTTGAGGTAAACAAAT+TGG - chr5.4:19449436-19449455 None:intergenic 30.0%
!! AGATTTCGAGTTTAATTAGG+TGG - chr5.4:19451492-19451511 None:intergenic 30.0%
!! CTAACGTGCTTTTGTTTAAT+TGG - chr5.4:19451257-19451276 None:intergenic 30.0%
!! CTAGTTGTGCCAATTTTAAT+TGG - chr5.4:19451304-19451323 None:intergenic 30.0%
!!! ACTAAAGGGATTGTTTTAGA+TGG + chr5.4:19450737-19450756 MS.gene35270:intron 30.0%
!!! TGTGTTGGAAGAGTTTTTTT+GGG + chr5.4:19449495-19449514 MS.gene35270:intron 30.0%
!!! TTGTGTTGGAAGAGTTTTTT+TGG + chr5.4:19449494-19449513 MS.gene35270:intron 30.0%
AAAGATTTAAAGAGACCGGA+AGG + chr5.4:19452073-19452092 MS.gene35270:CDS 35.0%
AAGAGTAGTACATGAAACGT+TGG - chr5.4:19451987-19452006 None:intergenic 35.0%
ATAACCATCATTGAAGGGTA+TGG - chr5.4:19448885-19448904 None:intergenic 35.0%
ATAATATTACACTCTGGTGG+TGG - chr5.4:19452039-19452058 None:intergenic 35.0%
ATCATACCTTACGTTGTTGT+GGG + chr5.4:19448774-19448793 MS.gene35270:CDS 35.0%
ATTCCAGCAGTATAATTCGA+TGG - chr5.4:19449167-19449186 None:intergenic 35.0%
ATTTAAGGATCTAGTCCTCA+AGG + chr5.4:19451834-19451853 MS.gene35270:CDS 35.0%
CGGTTTCAAACAAACTTGTA+TGG + chr5.4:19449723-19449742 MS.gene35270:CDS 35.0%
CGTGGTATGTTATAAGATTG+AGG + chr5.4:19450591-19450610 MS.gene35270:intron 35.0%
CTTGTGATTGCAAAAGTTTC+CGG + chr5.4:19450530-19450549 MS.gene35270:intron 35.0%
GACCACACAAGTTTAGTATT+GGG - chr5.4:19449936-19449955 None:intergenic 35.0%
GATGGTTATTCTCATCTCTT+CGG + chr5.4:19448896-19448915 MS.gene35270:CDS 35.0%
GCTGGAATAATATTACACTC+TGG - chr5.4:19452045-19452064 None:intergenic 35.0%
GGAATAATATTACACTCTGG+TGG - chr5.4:19452042-19452061 None:intergenic 35.0%
GGTATGTTATAAGATTGAGG+TGG + chr5.4:19450594-19450613 MS.gene35270:intron 35.0%
GTGTTAAGAAGTGAGGAAAT+GGG + chr5.4:19451694-19451713 MS.gene35270:CDS 35.0%
TCACTCAAAAGATAGCTTCA+TGG - chr5.4:19450114-19450133 None:intergenic 35.0%
TCGAATTCGATTCTTGCAAA+AGG - chr5.4:19450175-19450194 None:intergenic 35.0%
TGCAAAAGGTAATCCGATTA+TGG - chr5.4:19450161-19450180 None:intergenic 35.0%
TTACCATCGAATTATACTGC+TGG + chr5.4:19449161-19449180 MS.gene35270:CDS 35.0%
TTGTGATTGCAAAAGTTTCC+GGG + chr5.4:19450531-19450550 MS.gene35270:intron 35.0%
TTTAAGGATCTAGTCCTCAA+GGG + chr5.4:19451835-19451854 MS.gene35270:CDS 35.0%
! AGATGGTAGTGATGATACTT+TGG + chr5.4:19450754-19450773 MS.gene35270:intron 35.0%
! ATGTTTGACTTAATGTGAGG+GGG + chr5.4:19450620-19450639 MS.gene35270:intron 35.0%
! CATGTTTGACTTAATGTGAG+GGG + chr5.4:19450619-19450638 MS.gene35270:intron 35.0%
! TTAAATCTTTGTTTCTCCGC+TGG - chr5.4:19452063-19452082 None:intergenic 35.0%
AGTAGTACATGAAACGTTGG+CGG - chr5.4:19451984-19452003 None:intergenic 40.0%
ATGGTCGCATACAATGACAT+TGG - chr5.4:19451739-19451758 None:intergenic 40.0%
CATATGGGATGCGTCAAATT+GGG + chr5.4:19451756-19451775 MS.gene35270:CDS 40.0%
CATCATACCTTACGTTGTTG+TGG + chr5.4:19448773-19448792 MS.gene35270:CDS 40.0%
CGTTAGTTAGGAGCTTATGT+TGG + chr5.4:19451271-19451290 MS.gene35270:intron 40.0%
CTTCTTAACACCTCCCTAAT+TGG - chr5.4:19451685-19451704 None:intergenic 40.0%
GACCCAATACTAAACTTGTG+TGG + chr5.4:19449931-19449950 MS.gene35270:intron 40.0%
GGAATCTATGAGTTTGCGTT+TGG - chr5.4:19451439-19451458 None:intergenic 40.0%
GGACCACACAAGTTTAGTAT+TGG - chr5.4:19449937-19449956 None:intergenic 40.0%
GGTGTTAAGAAGTGAGGAAA+TGG + chr5.4:19451693-19451712 MS.gene35270:CDS 40.0%
GTAACATAGCTGGAAAACCA+TGG + chr5.4:19449700-19449719 MS.gene35270:CDS 40.0%
GTCATTGTATGCGACCATAT+GGG + chr5.4:19451741-19451760 MS.gene35270:CDS 40.0%
TATGTGTGAGCTAACAAGGA+TGG + chr5.4:19450696-19450715 MS.gene35270:intron 40.0%
TATGTTCCCACAACAACGTA+AGG - chr5.4:19448783-19448802 None:intergenic 40.0%
TATTCTCATCTCTTCGGAGA+TGG + chr5.4:19448902-19448921 MS.gene35270:CDS 40.0%
TCCTCCAAATTTCAACCTTC+CGG - chr5.4:19452091-19452110 None:intergenic 40.0%
TGAGAAAACTCACGATGAGT+TGG + chr5.4:19449662-19449681 MS.gene35270:CDS 40.0%
TGAGTATGTGTGAGCTAACA+AGG + chr5.4:19450692-19450711 MS.gene35270:intron 40.0%
TGATGAAGTTCCAATTAGGG+AGG + chr5.4:19451672-19451691 MS.gene35270:CDS 40.0%
TGTCATTGTATGCGACCATA+TGG + chr5.4:19451740-19451759 MS.gene35270:CDS 40.0%
TTAAGAAGTGAGGAAATGGG+AGG + chr5.4:19451697-19451716 MS.gene35270:CDS 40.0%
! AAGTTTGTTTGAAACCGCCA+TGG - chr5.4:19449720-19449739 None:intergenic 40.0%
! AGGTGAAAGTGATTTGCGTA+AGG + chr5.4:19449546-19449565 MS.gene35270:intron 40.0%
! AGTGACAACTCTACTCCTTT+TGG + chr5.4:19450129-19450148 MS.gene35270:intron 40.0%
! CATAGTCTTGAGCTTCAAGA+TGG - chr5.4:19451921-19451940 None:intergenic 40.0%
! GTTTTCCAGCTATGTTACCT+AGG - chr5.4:19449698-19449717 None:intergenic 40.0%
! TGTTTGACTTAATGTGAGGG+GGG + chr5.4:19450621-19450640 MS.gene35270:intron 40.0%
!! ATGGAAATGGAAGCACTCAT+CGG + chr5.4:19449742-19449761 MS.gene35270:CDS 40.0%
!! GAAAAGTGTTTCTTGCGTGT+GGG + chr5.4:19450643-19450662 MS.gene35270:intron 40.0%
!! TACAATGACATTGGCTTGAC+CGG - chr5.4:19451730-19451749 None:intergenic 40.0%
!! TTCAAGATGGACGTTTTGGT+CGG - chr5.4:19451908-19451927 None:intergenic 40.0%
!! TTCTAGAGTTTGGCATGAGA+AGG - chr5.4:19451040-19451059 None:intergenic 40.0%
AATTACCGGTGTAACGATCG+AGG - chr5.4:19448970-19448989 None:intergenic 45.0%
ACATAGCTGGAAAACCATGG+CGG + chr5.4:19449703-19449722 MS.gene35270:CDS 45.0%
ACCGGAAGGTTGAAATTTGG+AGG + chr5.4:19452087-19452106 MS.gene35270:CDS 45.0%
ATTAATCTGGCCCACACTCA+TGG + chr5.4:19450816-19450835 MS.gene35270:intron 45.0%
CCAATTTGACGCATCCCATA+TGG - chr5.4:19451758-19451777 None:intergenic 45.0%
CCATATGGGATGCGTCAAAT+TGG + chr5.4:19451755-19451774 MS.gene35270:CDS 45.0%
CCATGGCAATAAGTGGAAGA+CGG - chr5.4:19450306-19450325 None:intergenic 45.0%
GAGACCGGAAGGTTGAAATT+TGG + chr5.4:19452084-19452103 MS.gene35270:CDS 45.0%
GAGTTCCTAGGTAACATAGC+TGG + chr5.4:19449690-19449709 MS.gene35270:CDS 45.0%
GCAACCATACCCTTCAATGA+TGG + chr5.4:19448878-19448897 MS.gene35270:CDS 45.0%
GCCACAAATACACACATACC+CGG - chr5.4:19450552-19450571 None:intergenic 45.0%
GGGTCGGATACTTCTTGAAT+TGG - chr5.4:19451874-19451893 None:intergenic 45.0%
TAGGTGGAACTAATGGGACT+TGG - chr5.4:19451476-19451495 None:intergenic 45.0%
TCCGGGTATGTGTGTATTTG+TGG + chr5.4:19450548-19450567 MS.gene35270:intron 45.0%
TGCGTCAAATTGGGCAACAT+CGG + chr5.4:19451765-19451784 MS.gene35270:CDS 45.0%
! CATTGAAGGGTATGGTTGCA+AGG - chr5.4:19448877-19448896 None:intergenic 45.0%
! CTTTGGTTCGACCCAACTAA+AGG + chr5.4:19449786-19449805 MS.gene35270:CDS 45.0%
! GAGCTTCAAGATGGACGTTT+TGG - chr5.4:19451912-19451931 None:intergenic 45.0%
! GAGTTGGACTTTGAGTTCCT+AGG + chr5.4:19449678-19449697 MS.gene35270:CDS 45.0%
! GGAACTAATGGGACTTGGTT+TGG - chr5.4:19451471-19451490 None:intergenic 45.0%
!! ACAATGACATTGGCTTGACC+GGG - chr5.4:19451729-19451748 None:intergenic 45.0%
!! ATGGGACTTGGTTTGGCAAA+TGG - chr5.4:19451464-19451483 None:intergenic 45.0%
!! ATTCAAGTTGGCCATGAGTG+TGG - chr5.4:19450830-19450849 None:intergenic 45.0%
!! GACTTGGTTTGGCAAATGGT+AGG - chr5.4:19451460-19451479 None:intergenic 45.0%
!! GGAAAAGTGTTTCTTGCGTG+TGG + chr5.4:19450642-19450661 MS.gene35270:intron 45.0%
!! TACACTCTGGTGGTGGTATA+GGG - chr5.4:19452032-19452051 None:intergenic 45.0%
!! TAGGGAGGTGTTAAGAAGTG+AGG + chr5.4:19451687-19451706 MS.gene35270:CDS 45.0%
!! TGGAAATGGAAGCACTCATC+GGG + chr5.4:19449743-19449762 MS.gene35270:CDS 45.0%
!! TTACACTCTGGTGGTGGTAT+AGG - chr5.4:19452033-19452052 None:intergenic 45.0%
!! TTCAAGTTGGCCATGAGTGT+GGG - chr5.4:19450829-19450848 None:intergenic 45.0%
!!! AATATTTTGTTAAATAAATT+TGG + chr5.4:19451581-19451600 MS.gene35270:intron 5.0%
!!! AATTGATTAATTTTTTATAT+AGG + chr5.4:19449080-19449099 MS.gene35270:intron 5.0%
!!! ATATTTTGTTAAATAAATTT+GGG + chr5.4:19451582-19451601 MS.gene35270:intron 5.0%
!!! ATTTTTTTTTTAGAAAAAAA+AGG + chr5.4:19449526-19449545 MS.gene35270:intron 5.0%
AACGTTGTTCGTTCCTCCGA+TGG + chr5.4:19448926-19448945 MS.gene35270:CDS 50.0%
CCGTCTTCCACTTATTGCCA+TGG + chr5.4:19450303-19450322 MS.gene35270:intron 50.0%
GATCAACTGAGCAACCCTTG+AGG - chr5.4:19451852-19451871 None:intergenic 50.0%
GCGTCAAATTGGGCAACATC+GGG + chr5.4:19451766-19451785 MS.gene35270:CDS 50.0%
GGAAATGGGAGGTGAATACC+CGG + chr5.4:19451708-19451727 MS.gene35270:CDS 50.0%
TCAAATTGGGCAACATCGGG+TGG + chr5.4:19451769-19451788 MS.gene35270:CDS 50.0%
TGTAACGATCGAGGAGGAGT+TGG - chr5.4:19448961-19448980 None:intergenic 50.0%
! TTTTGGTCGGAGCAAACGTC+GGG - chr5.4:19451895-19451914 None:intergenic 50.0%
!! CCTTGATCGGTGTCATCTAC+CGG - chr5.4:19452156-19452175 None:intergenic 50.0%
!! GGAAATGGAAGCACTCATCG+GGG + chr5.4:19449744-19449763 MS.gene35270:CDS 50.0%
!! GTGAGGAGCGTTATCGTCTT+TGG + chr5.4:19449769-19449788 MS.gene35270:CDS 50.0%
!! GTTTTGGTCGGAGCAAACGT+CGG - chr5.4:19451896-19451915 None:intergenic 50.0%
CCGGTAGATGACACCGATCA+AGG + chr5.4:19452153-19452172 MS.gene35270:CDS 55.0%
CTCCTCCTCGATCGTTACAC+CGG + chr5.4:19448962-19448981 MS.gene35270:CDS 55.0%
GAGTTGGACACCGTTGCCAT+CGG - chr5.4:19448945-19448964 None:intergenic 55.0%
GGGTGGTCGTACTTCAACTC+CGG + chr5.4:19452134-19452153 MS.gene35270:CDS 55.0%
GTTCGTTCCTCCGATGGCAA+CGG + chr5.4:19448932-19448951 MS.gene35270:CDS 55.0%
TACCGGTGTAACGATCGAGG+AGG - chr5.4:19448967-19448986 None:intergenic 55.0%
TTTGGTCGGAGCAAACGTCG+GGG - chr5.4:19451894-19451913 None:intergenic 55.0%
AAGCACTCATCGGGGTCGTG+AGG + chr5.4:19449752-19449771 MS.gene35270:CDS 60.0%
GAAGCCACCGCCGACATTCT+AGG + chr5.4:19452109-19452128 MS.gene35270:CDS 60.0%
GACCACCCCGCCTAGAATGT+CGG - chr5.4:19452122-19452141 None:intergenic 60.0%
GGAACCTTCGCATTGCGAGG+CGG - chr5.4:19451963-19451982 None:intergenic 60.0%
TTGGACACCGTTGCCATCGG+AGG - chr5.4:19448942-19448961 None:intergenic 60.0%
CACCCCGCCTAGAATGTCGG+CGG - chr5.4:19452119-19452138 None:intergenic 65.0%
CACCGCCGACATTCTAGGCG+GGG + chr5.4:19452114-19452133 MS.gene35270:CDS 65.0%
CCACCGCCGACATTCTAGGC+GGG + chr5.4:19452113-19452132 MS.gene35270:CDS 65.0%
GCCACCGCCGACATTCTAGG+CGG + chr5.4:19452112-19452131 MS.gene35270:CDS 65.0%
GGCGGAACCTTCGCATTGCG+AGG - chr5.4:19451966-19451985 None:intergenic 65.0%
GTCGGAGCAAACGTCGGGGT+CGG - chr5.4:19451890-19451909 None:intergenic 65.0%
CATTGCGAGGCGGCGCATGG+GGG - chr5.4:19451953-19451972 None:intergenic 70.0%
CCCGCCTAGAATGTCGGCGG+TGG - chr5.4:19452116-19452135 None:intergenic 70.0%
CGCATTGCGAGGCGGCGCAT+GGG - chr5.4:19451955-19451974 None:intergenic 70.0%
CGCCGACATTCTAGGCGGGG+TGG + chr5.4:19452117-19452136 MS.gene35270:CDS 70.0%
GCATTGCGAGGCGGCGCATG+GGG - chr5.4:19451954-19451973 None:intergenic 70.0%
GCGGCGCATGGGGGTCACAT+TGG - chr5.4:19451944-19451963 None:intergenic 70.0%
TCGCATTGCGAGGCGGCGCA+TGG - chr5.4:19451956-19451975 None:intergenic 70.0%
TGCGCCGCCTCGCAATGCGA+AGG + chr5.4:19451956-19451975 MS.gene35270:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 19448767 19452185 19448767 ID=MS.gene35270
chr5.4 mRNA 19448767 19452185 19448767 ID=MS.gene35270.t1;Parent=MS.gene35270
chr5.4 exon 19448767 19448983 19448767 ID=MS.gene35270.t1.exon1;Parent=MS.gene35270.t1
chr5.4 CDS 19448767 19448983 19448767 ID=cds.MS.gene35270.t1;Parent=MS.gene35270.t1
chr5.4 exon 19449102 19449202 19449102 ID=MS.gene35270.t1.exon2;Parent=MS.gene35270.t1
chr5.4 CDS 19449102 19449202 19449102 ID=cds.MS.gene35270.t1;Parent=MS.gene35270.t1
chr5.4 exon 19449642 19449850 19449642 ID=MS.gene35270.t1.exon3;Parent=MS.gene35270.t1
chr5.4 CDS 19449642 19449850 19449642 ID=cds.MS.gene35270.t1;Parent=MS.gene35270.t1
chr5.4 exon 19451663 19452185 19451663 ID=MS.gene35270.t1.exon4;Parent=MS.gene35270.t1
chr5.4 CDS 19451663 19452185 19451663 ID=cds.MS.gene35270.t1;Parent=MS.gene35270.t1
Gene Sequence

>MS.gene35270

ATGAATCATCATACCTTACGTTGTTGTGGGAACATACCCAAAACTCATTTCCTATTTTCATTTTTTTCTCTATTTCTTCTCTTCAGTTTCACAAACTCAGCTTTCGACCTTGCAACCATACCCTTCAATGATGGTTATTCTCATCTCTTCGGAGATGGCAACGTTGTTCGTTCCTCCGATGGCAACGGTGTCCAACTCCTCCTCGATCGTTACACCGGTAATTAAATTATTAAATCATATCATACACATGCAAAGTATGATCAATTATGTTTTGTTTCTTGAAGGTTTATATTTTCTTGTATGATTTTTCTTTAATTGATTAATTTTTTATATAGGTTCTGGTTTTATTTCATCAAATATGTATCAACATGGATTCTTCAGCGCAAATATCAAGTTACCATCGAATTATACTGCTGGAATTTGTGTTGCGTTTTATGTAAGTATACACAAAATAATATTTGTGAATTTCTTGAATCAAACTTTGTTATAGTATATGTTTATTCCTTTCATAATTGATCCTTTTTTGTTACAAAAAGATTGTTTAATATTTTATCATTTATGTGGTGATTAAAAAAATTATAAATATGAGTTAAACTTTCCTTTTACTTGGTGGAGAATTTTCCAAAGAACAAGCAAAGTCAATTATTACGGATTCAGCGTGAAACACCAATTTGTTTACCTCAAAGTGTTCAAAAAGGAAAAAGTCTTCAAACTCTATATAAATATTTTGTGTTGGAAGAGTTTTTTTGGGTGAAAGTTATTTTTTTTTTAGAAAAAAAAGGTGAAAGTGATTTGCGTAAGGTATATGAAATGAAACGGAACAGTTTTGTTATGTACTTTTGACGTTAACTTTTGAACTTTTGTTGTTATTACAGACATCAAACGGTGATGTGTTTGAGAAAACTCACGATGAGTTGGACTTTGAGTTCCTAGGTAACATAGCTGGAAAACCATGGCGGTTTCAAACAAACTTGTATGGAAATGGAAGCACTCATCGGGGTCGTGAGGAGCGTTATCGTCTTTGGTTCGACCCAACTAAAGGATATCATAGATATAGTATTCTTTGGACAGCAAAAAATGTCATGTAAGTGTCTCTATTACTACATTCATTGTTGTCATATAAGCATATTTCATTTGTGTGTTTATGGTTTACTTAAAATTTTGGACCCAATACTAAACTTGTGTGGTCCAATAGTAGAATATTAATTGTCTAGTGAATTTAAAATGACTCTATATCGTCTTATACTTTAAATTGAATCGAACTAAATTACTCTAATTAGAATATCTGACAACAACCGTAGTAAGCGTCTCAATATATCTCCACAACTTAGATTATTTGGCTTGCCATGAAGCTATCTTTTGAGTGACAACTCTACTCCTTTTGGATTTTACCATAATCGGATTACCTTTTGCAAGAATCGAATTCGAGTTCTTTTTTCTTAAGCTAGAGTCATATTATCAACTCTTCTAACATTATGTTGGTTAAATCAATCATGTTGAATCAATCATAGATAATACAAGTTTATAAAACAAATGCCGTCTTCCACTTATTGCCATGGTAAAATAGTTTTATACTAACATCCAATAAGAATTCTATATGTTTTCACATAAGCCTATATTGTAACCTATATAAAAAATAAACTTCAATAATACCTAAGTTTCATCGAATGTTAGTATATAAAATTATAGGTAGTTTGAACCGATAAAACTTGTCCTCTTTTTGATTTTATTTTTTCTTTCCTTATGTGTTTATGGATTGGTTGCTTGTGATTGCAAAAGTTTCCGGGTATGTGTGTATTTGTGGCTTTAGATATTAACTAATAACGTGGTATGTTATAAGATTGAGGTGGTTCATGTTTGACTTAATGTGAGGGGGGAAAAGTGTTTCTTGCGTGTGGGATAAGTCATCTATCTACAACTTGAATTGAGTATGTGTGAGCTAACAAGGATGGAAAGCCATAGTTTTTATTACTAAAGGGATTGTTTTAGATGGTAGTGATGATACTTTGGAGTATTGATCCATTATTTTTCCCATTTTAGAAAGGTATAATTAATCTGGCCCACACTCATGGCCAACTTGAATTTTGTTTCTTACGTATAATTTTATAATTCAATAGTTATTGCTTTTATAGTTTTTTCTTCATTTTCTTTATGGTGATGATAATGATGATTAAATTTCTAATAAAAAAATGTGCTTATCGTTATGTTTACGCTATGTGTATAATACATGTAATACGTGTTAAATCATAATTAGCCATTTTTAATTTGGTCCTTCTCATGCCAAACTCTAGAATTGATATTTTGATAGTTTGATAATCCTGATGTGAAAGCCTATTAAAATAAGGATAATACTAGATTGTGGGGTGAGCAAAAATGCTTTAGTTTGCTAATTAATTAATTAATTTAGCATTACGTATTATTAAAATGATTTAGCGATTTCTTGCGTTTCTAGAATTTGACTGAAATATTTCGTCGATATGACTAAATCCAATTAAACAAAAGCACGTTAGTTAGGAGCTTATGTTGGCCAAAATCCAATTAAAATTGGCACAACTAGCTAGAACTTAGATAAAGGAAAATTAATTCATGCACAATAAATTAAGGTGAAATGTTCATTTTAATTAATATATATCTGTGTGTATATATGTAAAGCAGTTTTAGTTAGTTTACCAAACGCAAACTCATAGATTCCTACCATTTGCCAAACCAAGTCCCATTAGTTCCACCTAATTAAACTCGAAATCTAGTTGGCAAAAATTTATTCTTATTCCATGTGAATATATGTAAACTTATATGCTACCTACTTACCTTACTAATATTTTGTTAAATAAATTTGGGCATAGCTATGATTAATAATTTAATAGTATATACTCATTACTTGTTTGAATTGTTGCAGATTTTACATTGATGAAGTTCCAATTAGGGAGGTGTTAAGAAGTGAGGAAATGGGAGGTGAATACCCGGTCAAGCCAATGTCATTGTATGCGACCATATGGGATGCGTCAAATTGGGCAACATCGGGTGGAAAATACAAAGTAAATTATAAATATGCTCCTTTTGTTGTTGAATTTAAGGATCTAGTCCTCAAGGGTTGCTCAGTTGATCCAATTCAAGAAGTATCCGACCCCGACGTTTGCTCCGACCAAAACGTCCATCTTGAAGCTCAAGACTATGCCAATGTGACCCCCATGCGCCGCCTCGCAATGCGAAGGTTCCGCCAACGTTTCATGTACTACTCTTATTGCTATGATACAATTAGGTACCCTATACCACCACCAGAGTGTAATATTATTCCAGCGGAGAAACAAAGATTTAAAGAGACCGGAAGGTTGAAATTTGGAGGAAGCCACCGCCGACATTCTAGGCGGGGTGGTCGTACTTCAACTCCGGTAGATGACACCGATCAAGGTGATATGTGA
Protein sequence

>MS.gene35270.t1

MNHHTLRCCGNIPKTHFLFSFFSLFLLFSFTNSAFDLATIPFNDGYSHLFGDGNVVRSSDGNGVQLLLDRYTGSGFISSNMYQHGFFSANIKLPSNYTAGICVAFYTSNGDVFEKTHDELDFEFLGNIAGKPWRFQTNLYGNGSTHRGREERYRLWFDPTKGYHRYSILWTAKNVIFYIDEVPIREVLRSEEMGGEYPVKPMSLYATIWDASNWATSGGKYKVNYKYAPFVVEFKDLVLKGCSVDPIQEVSDPDVCSDQNVHLEAQDYANVTPMRRLAMRRFRQRFMYYSYCYDTIRYPIPPPECNIIPAEKQRFKETGRLKFGGSHRRHSRRGGRTSTPVDDTDQGDM