Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055111.t1 | XP_013449058.1 | 96.7 | 423 | 7 | 1 | 1 | 416 | 1 | 423 | 1.00E-228 | 802.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055111.t1 | Q9Y2M2 | 28.7 | 321 | 208 | 7 | 88 | 406 | 48 | 349 | 7.1e-13 | 76.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055111.t1 | A0A072UB64 | 96.7 | 423 | 7 | 1 | 1 | 416 | 1 | 423 | 7.3e-229 | 802.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene055111 | -0.805315 | 1.42E-49 | -1.69E-46 |
| MS.gene049265 | MS.gene055111 | 0.809974 | 1.45E-50 | -1.69E-46 |
| MS.gene053561 | MS.gene055111 | 0.829037 | 6.44E-55 | -1.69E-46 |
| MS.gene054708 | MS.gene055111 | 0.801051 | 1.08E-48 | -1.69E-46 |
| MS.gene055111 | MS.gene055154 | 0.808236 | 3.42E-50 | -1.69E-46 |
| MS.gene055111 | MS.gene058840 | 0.81019 | 1.30E-50 | -1.69E-46 |
| MS.gene055111 | MS.gene06332 | -0.804783 | 1.83E-49 | -1.69E-46 |
| MS.gene055111 | MS.gene068043 | 0.840396 | 8.92E-58 | -1.69E-46 |
| MS.gene055111 | MS.gene072962 | -0.809171 | 2.16E-50 | -1.69E-46 |
| MS.gene055111 | MS.gene072966 | -0.809302 | 2.02E-50 | -1.69E-46 |
| MS.gene055111 | MS.gene072979 | 0.804904 | 1.73E-49 | -1.69E-46 |
| MS.gene055111 | MS.gene26517 | 0.811516 | 6.73E-51 | -1.69E-46 |
| MS.gene055111 | MS.gene27827 | 0.80671 | 7.21E-50 | -1.69E-46 |
| MS.gene055111 | MS.gene29460 | -0.803088 | 4.12E-49 | -1.69E-46 |
| MS.gene055111 | MS.gene33139 | 0.801453 | 8.94E-49 | -1.69E-46 |
| MS.gene055111 | MS.gene35270 | 0.81282 | 3.50E-51 | -1.69E-46 |
| MS.gene055111 | MS.gene35546 | 0.843985 | 1.00E-58 | -1.69E-46 |
| MS.gene055111 | MS.gene40305 | -0.809421 | 1.91E-50 | -1.69E-46 |
| MS.gene055111 | MS.gene40874 | 0.806447 | 8.19E-50 | -1.69E-46 |
| MS.gene055111 | MS.gene40875 | 0.816469 | 5.44E-52 | -1.69E-46 |
| MS.gene055111 | MS.gene40958 | -0.805435 | 1.34E-49 | -1.69E-46 |
| MS.gene055111 | MS.gene46060 | 0.817675 | 2.92E-52 | -1.69E-46 |
| MS.gene055111 | MS.gene46895 | -0.811065 | 8.43E-51 | -1.69E-46 |
| MS.gene055111 | MS.gene49716 | -0.821522 | 3.86E-53 | -1.69E-46 |
| MS.gene055111 | MS.gene51018 | 0.814144 | 1.79E-51 | -1.69E-46 |
| MS.gene055111 | MS.gene60403 | -0.800938 | 1.14E-48 | -1.69E-46 |
| MS.gene055111 | MS.gene69610 | 0.807832 | 4.17E-50 | -1.69E-46 |
| MS.gene055111 | MS.gene70171 | -0.821772 | 3.38E-53 | -1.69E-46 |
| MS.gene055111 | MS.gene71150 | 0.839327 | 1.69E-57 | -1.69E-46 |
| MS.gene055111 | MS.gene71904 | 0.800783 | 1.23E-48 | -1.69E-46 |
| MS.gene055111 | MS.gene75768 | -0.807278 | 5.47E-50 | -1.69E-46 |
| MS.gene055111 | MS.gene76224 | 0.801463 | 8.90E-49 | -1.69E-46 |
| MS.gene055111 | MS.gene76453 | 0.809462 | 1.87E-50 | -1.69E-46 |
| MS.gene055111 | MS.gene76628 | -0.828959 | 6.73E-55 | -1.69E-46 |
| MS.gene055111 | MS.gene83729 | 0.813696 | 2.25E-51 | -1.69E-46 |
| MS.gene055111 | MS.gene88929 | -0.80628 | 8.88E-50 | -1.69E-46 |
| MS.gene055111 | MS.gene89261 | 0.806197 | 9.25E-50 | -1.69E-46 |
| MS.gene055111 | MS.gene90201 | 0.827436 | 1.57E-54 | -1.69E-46 |
| MS.gene055111 | MS.gene91659 | 0.820451 | 6.81E-53 | -1.69E-46 |
| MS.gene055111 | MS.gene92939 | 0.801016 | 1.10E-48 | -1.69E-46 |
| MS.gene055111 | MS.gene94262 | 0.807265 | 5.50E-50 | -1.69E-46 |
| MS.gene055111 | MS.gene95478 | 0.814052 | 1.88E-51 | -1.69E-46 |
| MS.gene055111 | MS.gene98076 | 0.805436 | 1.34E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055111.t1 | MTR_7g066250 | 96.690 | 423 | 7 | 1 | 1 | 416 | 1 | 423 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055111.t1 | AT2G38000 | 62.295 | 427 | 142 | 6 | 1 | 416 | 1 | 419 | 0.0 | 553 |
Find 107 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGACCTGAACTTGGTATT+TGG | 0.143432 | 7.4:+38663224 | MS.gene055111:CDS |
| ATTGAACTCCTTTGGATCTA+TGG | 0.205179 | 7.4:-38665623 | None:intergenic |
| TGACAGGGAGGTTTACTTAA+AGG | 0.241321 | 7.4:+38665857 | MS.gene055111:CDS |
| TTATTATACCTTCGGAATTC+AGG | 0.267230 | 7.4:-38662313 | None:intergenic |
| GGTGGATATGGAGGAGATTA+TGG | 0.304945 | 7.4:+38662280 | MS.gene055111:CDS |
| ATTGCATAATTGAACTCCTT+TGG | 0.315587 | 7.4:-38665631 | None:intergenic |
| GGTTACTATCCTCCTGTTCA+TGG | 0.315738 | 7.4:+38661387 | MS.gene055111:CDS |
| TGAACTTGGTATTTGGGAAT+TGG | 0.319345 | 7.4:+38663231 | MS.gene055111:CDS |
| CGTTGGTCATCGTTGTTGTT+GGG | 0.319437 | 7.4:+38663057 | MS.gene055111:CDS |
| TAGAACAAAGAAGTGGAAAA+TGG | 0.328541 | 7.4:+38661265 | MS.gene055111:intron |
| GCAATGTAGCCATTATAAAA+TGG | 0.334240 | 7.4:+38663868 | MS.gene055111:CDS |
| GTTGCTTATCAAGGTGGATA+TGG | 0.336687 | 7.4:+38662268 | MS.gene055111:CDS |
| GTATTTGGGAATTGGATCTA+AGG | 0.340045 | 7.4:+38663239 | MS.gene055111:CDS |
| TTGGGGCTTGTGTCCTTGTT+TGG | 0.342743 | 7.4:+38665902 | MS.gene055111:CDS |
| AGGACCTGAACTTGGTATTT+GGG | 0.353750 | 7.4:+38663225 | MS.gene055111:CDS |
| GACATGGTGACGCGAGTTAC+CGG | 0.358872 | 7.4:-38665795 | None:intergenic |
| GCTCCTGTTCCTTCTTCTGC+AGG | 0.365248 | 7.4:+38661366 | MS.gene055111:CDS |
| AATATTGATGGAAAGGATAA+AGG | 0.372577 | 7.4:+38663205 | MS.gene055111:CDS |
| ACTCAGTGTCCTAGTTGTTA+TGG | 0.382433 | 7.4:+38663541 | MS.gene055111:CDS |
| TCCTTCAGTTTCTATATTGT+AGG | 0.389220 | 7.4:+38665831 | MS.gene055111:CDS |
| TGCTCGAACATGGAAGATTC+AGG | 0.412128 | 7.4:+38663090 | MS.gene055111:CDS |
| ACATACAATCTCAGTTGTTC+CGG | 0.418682 | 7.4:+38665776 | MS.gene055111:CDS |
| ATGGAACAACCTCTTCTATC+AGG | 0.419335 | 7.4:+38661122 | MS.gene055111:CDS |
| ACGTTGGTCATCGTTGTTGT+TGG | 0.419460 | 7.4:+38663056 | MS.gene055111:CDS |
| TATGAGCATGTGGGTCGAAC+AGG | 0.420593 | 7.4:+38661294 | MS.gene055111:CDS |
| CTGAAGGGTACAAATAGAAA+AGG | 0.425601 | 7.4:-38663271 | None:intergenic |
| TACCCTGGTGGAAATATTGA+TGG | 0.431134 | 7.4:+38663193 | MS.gene055111:CDS |
| TCAACACTTACACATGTTCC+AGG | 0.431617 | 7.4:-38661327 | None:intergenic |
| TGGACATTATAAAGAAAATC+AGG | 0.436112 | 7.4:+38663516 | MS.gene055111:CDS |
| GTTACTATCCTCCTGTTCAT+GGG | 0.438066 | 7.4:+38661388 | MS.gene055111:CDS |
| ATACCTTCGGAATTCAGGTC+TGG | 0.460321 | 7.4:-38662308 | None:intergenic |
| GAAGTTATTGAGAAATGCTC+AGG | 0.463765 | 7.4:+38663322 | MS.gene055111:CDS |
| TGCAATGCTGATGGAGAACC+TGG | 0.465954 | 7.4:+38663496 | MS.gene055111:CDS |
| TGGATACGTTTATAGAAGAA+AGG | 0.466452 | 7.4:+38663146 | MS.gene055111:CDS |
| TGAATCTTCCATGTTCGAGC+AGG | 0.474774 | 7.4:-38663088 | None:intergenic |
| GTGTCCTAGTTGTTATGGAA+GGG | 0.475063 | 7.4:+38663546 | MS.gene055111:CDS |
| CGAACAGGTTCTGCATATCC+TGG | 0.475291 | 7.4:+38661309 | MS.gene055111:CDS |
| TCTATATTGTAGGAAATGAC+AGG | 0.476508 | 7.4:+38665841 | MS.gene055111:CDS |
| GGTTTGATTGCTCATAAAGA+TGG | 0.476633 | 7.4:+38663568 | MS.gene055111:CDS |
| CTTAACTGTGAAACGTGTAA+TGG | 0.480057 | 7.4:+38663825 | MS.gene055111:CDS |
| TTCTCAATAACTTCAGAATG+AGG | 0.490617 | 7.4:-38663313 | None:intergenic |
| TGTCCTAGTTGTTATGGAAG+GGG | 0.490801 | 7.4:+38663547 | MS.gene055111:CDS |
| AGGAACATACCAGCAGGATC+AGG | 0.493251 | 7.4:-38661432 | None:intergenic |
| TCAATATTTCCACCAGGGTA+TGG | 0.494935 | 7.4:-38663190 | None:intergenic |
| TAACCTGCAGAAGAAGGAAC+AGG | 0.501782 | 7.4:-38661369 | None:intergenic |
| GGATCTATGGAAAACTTCAT+CGG | 0.503388 | 7.4:-38665610 | None:intergenic |
| GATCTATGGAAAACTTCATC+GGG | 0.504105 | 7.4:-38665609 | None:intergenic |
| GAAGACTGTAATGTTTATGT+TGG | 0.506847 | 7.4:+38663118 | MS.gene055111:CDS |
| TCATCTGAGCCTGATCCTGC+TGG | 0.515267 | 7.4:+38661423 | MS.gene055111:CDS |
| GGATAGTAACCTGCAGAAGA+AGG | 0.515742 | 7.4:-38661375 | None:intergenic |
| ATCCACTTATAGGGAAACCT+TGG | 0.516020 | 7.4:+38663000 | MS.gene055111:intron |
| GTACAAGCTGTTGCTTATCA+AGG | 0.524027 | 7.4:+38662259 | MS.gene055111:intron |
| AAGGATAAAGGACCTGAACT+TGG | 0.524416 | 7.4:+38663217 | MS.gene055111:CDS |
| AAGCTTCCTTGTGCGACTTG+TGG | 0.525179 | 7.4:+38663789 | MS.gene055111:CDS |
| TTACTATCCTCCTGTTCATG+GGG | 0.529196 | 7.4:+38661389 | MS.gene055111:CDS |
| CAAATGACTCTTGCAGTGGC+AGG | 0.534071 | 7.4:-38665747 | None:intergenic |
| GATAAATTAGAACAAAGAAG+TGG | 0.536572 | 7.4:+38661258 | MS.gene055111:intron |
| TGAAGGGTACAAATAGAAAA+GGG | 0.540231 | 7.4:-38663270 | None:intergenic |
| TCGTATCTCTACTTCATCCA+AGG | 0.540313 | 7.4:-38663017 | None:intergenic |
| GTAGCCGCCCTGCTCGAACA+TGG | 0.540393 | 7.4:+38663080 | MS.gene055111:CDS |
| TGGTGGAAATATTGATGGAA+AGG | 0.543305 | 7.4:+38663198 | MS.gene055111:CDS |
| GTTGGTCATCGTTGTTGTTG+GGG | 0.543611 | 7.4:+38663058 | MS.gene055111:CDS |
| AAAAGGCAGGAGTGCATTGG+TGG | 0.545573 | 7.4:-38665662 | None:intergenic |
| GGATACGTTTATAGAAGAAA+GGG | 0.547661 | 7.4:+38663147 | MS.gene055111:CDS |
| AGTGTCCTAGTTGTTATGGA+AGG | 0.551912 | 7.4:+38663545 | MS.gene055111:CDS |
| AATTCCCAAATACCAAGTTC+AGG | 0.553284 | 7.4:-38663229 | None:intergenic |
| TGCAGATGTGTGAAATGTAA+TGG | 0.564143 | 7.4:+38663759 | MS.gene055111:intron |
| GCTTGTGTCCTTGTTTGGAG+TGG | 0.568621 | 7.4:+38665907 | MS.gene055111:CDS |
| CGGAAAGTAAGTGCAACTAA+AGG | 0.571263 | 7.4:+38665573 | MS.gene055111:CDS |
| TGTGCGACTTGTGGATCTCG+TGG | 0.577723 | 7.4:+38663798 | MS.gene055111:CDS |
| TTTCCATCAATATTTCCACC+AGG | 0.579726 | 7.4:-38663196 | None:intergenic |
| AACTTCAACCACTCCAAACA+AGG | 0.582534 | 7.4:-38665915 | None:intergenic |
| TGTGCTACATGCAATGCTGA+TGG | 0.584240 | 7.4:+38663487 | MS.gene055111:CDS |
| TGTGTGAAATGTAATGGTAA+AGG | 0.585166 | 7.4:+38663765 | MS.gene055111:CDS |
| ATGGAGCTCATATGAGCATG+TGG | 0.588921 | 7.4:+38661284 | MS.gene055111:CDS |
| AAAATTGTACCTGATAGAAG+AGG | 0.593010 | 7.4:-38661131 | None:intergenic |
| TCAGGTTGTGCCGGGCGAGG+AGG | 0.593663 | 7.4:+38663457 | MS.gene055111:intron |
| TCCTACAATATAGAAACTGA+AGG | 0.594984 | 7.4:-38665832 | None:intergenic |
| AAGCCCCAACAAAATCTAGA+GGG | 0.599965 | 7.4:-38665888 | None:intergenic |
| TTCCATCAATATTTCCACCA+GGG | 0.602904 | 7.4:-38663195 | None:intergenic |
| TGTGAAACGTGTAATGGAAG+TGG | 0.607659 | 7.4:+38663831 | MS.gene055111:CDS |
| AGTTCAATTATGCAATACTC+AGG | 0.608227 | 7.4:+38665638 | MS.gene055111:CDS |
| GAATCTTCCATGTTCGAGCA+GGG | 0.608319 | 7.4:-38663087 | None:intergenic |
| ACAGACTATTCCTCCTCGCC+CGG | 0.608323 | 7.4:-38663467 | None:intergenic |
| AAACCCCTTCCATAACAACT+AGG | 0.608898 | 7.4:-38663550 | None:intergenic |
| TACTATCCTCCTGTTCATGG+GGG | 0.610681 | 7.4:+38661390 | MS.gene055111:CDS |
| CGAGATCCACAAGTCGCACA+AGG | 0.611817 | 7.4:-38663795 | None:intergenic |
| CTATATTGTAGGAAATGACA+GGG | 0.624050 | 7.4:+38665842 | MS.gene055111:CDS |
| GGATATGGAGGAGATTATGG+TGG | 0.627329 | 7.4:+38662283 | MS.gene055111:CDS |
| GCTTATCAAGGTGGATATGG+AGG | 0.627471 | 7.4:+38662271 | MS.gene055111:CDS |
| CTCACAAATGACTCTTGCAG+TGG | 0.628837 | 7.4:-38665751 | None:intergenic |
| TAATGTTTATGTTGGAACGC+TGG | 0.633236 | 7.4:+38663126 | MS.gene055111:CDS |
| AAAGAGACAGAGCCATACCC+TGG | 0.641609 | 7.4:+38663178 | MS.gene055111:CDS |
| CAAGCTGTTGCTTATCAAGG+TGG | 0.648886 | 7.4:+38662262 | MS.gene055111:CDS |
| GAACCAGACCTGAATTCCGA+AGG | 0.656715 | 7.4:+38662305 | MS.gene055111:CDS |
| AAAGGCAGGAGTGCATTGGT+GGG | 0.657869 | 7.4:-38665661 | None:intergenic |
| CAAGCCCCAACAAAATCTAG+AGG | 0.660144 | 7.4:-38665889 | None:intergenic |
| AGTAAGTGCAACTAAAGGAG+CGG | 0.664827 | 7.4:+38665578 | MS.gene055111:CDS |
| GGATTGCCGACGATGAGACA+TGG | 0.665410 | 7.4:-38665811 | None:intergenic |
| ACAGGAAGACACTTTCAACT+CGG | 0.667034 | 7.4:+38665553 | MS.gene055111:intron |
| TGGAGCTCATATGAGCATGT+GGG | 0.669407 | 7.4:+38661285 | MS.gene055111:CDS |
| GCGTCACCATGTCTCATCGT+CGG | 0.669689 | 7.4:+38665805 | MS.gene055111:CDS |
| GAGACAGAGCCATACCCTGG+TGG | 0.678375 | 7.4:+38663181 | MS.gene055111:CDS |
| AGCCCCAACAAAATCTAGAG+GGG | 0.694268 | 7.4:-38665887 | None:intergenic |
| GAGCTGCTCATTGATCACGT+TGG | 0.698946 | 7.4:+38663040 | MS.gene055111:CDS |
| TCTTCCATGTTCGAGCAGGG+CGG | 0.712512 | 7.4:-38663084 | None:intergenic |
| TATTGTAGGAAATGACAGGG+AGG | 0.745630 | 7.4:+38665845 | MS.gene055111:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAGATTATTATTTTCA+AGG | + | chr7.4:38662862-38662881 | MS.gene055111:intron | 10.0% |
| !!! | GTTATTTTTATATTTGTATT+TGG | + | chr7.4:38664592-38664611 | MS.gene055111:intron | 10.0% |
| !!! | TTAAACATAAAAGTATTTTA+TGG | - | chr7.4:38664123-38664142 | None:intergenic | 10.0% |
| !! | AAAACAAATAGTATAAGTTT+CGG | - | chr7.4:38664376-38664395 | None:intergenic | 15.0% |
| !! | AATAAATTAAACAATACAAG+AGG | - | chr7.4:38664669-38664688 | None:intergenic | 15.0% |
| !!! | AAAGAACTTTTAATCATAAA+GGG | - | chr7.4:38662931-38662950 | None:intergenic | 15.0% |
| !!! | ATTAACATACCATTTTATAA+TGG | - | chr7.4:38663880-38663899 | None:intergenic | 15.0% |
| !!! | TAAAGAACTTTTAATCATAA+AGG | - | chr7.4:38662932-38662951 | None:intergenic | 15.0% |
| !! | AAAAAAAGAATCAGCAAAAA+AGG | - | chr7.4:38665682-38665701 | None:intergenic | 20.0% |
| !! | ACGCCTATTTAAATAAAATA+TGG | - | chr7.4:38664453-38664472 | None:intergenic | 20.0% |
| !! | ACTTTGAACAATATATACAT+AGG | + | chr7.4:38664503-38664522 | MS.gene055111:intron | 20.0% |
| !! | ATATACATAGGTATTAAGAA+GGG | + | chr7.4:38664515-38664534 | MS.gene055111:intron | 20.0% |
| !! | ATATACGTTCAAAATATCTT+TGG | + | chr7.4:38664152-38664171 | MS.gene055111:intron | 20.0% |
| !! | CCTATTTAAATAAAATATGG+AGG | - | chr7.4:38664450-38664469 | None:intergenic | 20.0% |
| !! | TAAGAATAATATGATACTGT+AGG | - | chr7.4:38665470-38665489 | None:intergenic | 20.0% |
| !! | TATATACATAGGTATTAAGA+AGG | + | chr7.4:38664514-38664533 | MS.gene055111:intron | 20.0% |
| !! | TGATCAATAATCTTATCAAA+TGG | + | chr7.4:38662974-38662993 | MS.gene055111:intron | 20.0% |
| !! | TTAATTCTAATCTACTTTGA+CGG | - | chr7.4:38662655-38662674 | None:intergenic | 20.0% |
| !! | TTTAAATAAAATATGGAGGT+CGG | - | chr7.4:38664446-38664465 | None:intergenic | 20.0% |
| !!! | AAATAATTTCCAAGGTTTTA+AGG | - | chr7.4:38663437-38663456 | None:intergenic | 20.0% |
| !!! | AAGTGAAATATGTAGTTTTT+CGG | + | chr7.4:38664333-38664352 | MS.gene055111:intron | 20.0% |
| !!! | AATAATTTCCAAGGTTTTAA+GGG | - | chr7.4:38663436-38663455 | None:intergenic | 20.0% |
| !!! | ACATAAAAGTATTTTATGGA+TGG | - | chr7.4:38664119-38664138 | None:intergenic | 20.0% |
| !!! | AGAATGAAAGTTCTAAAAAA+CGG | - | chr7.4:38661984-38662003 | None:intergenic | 20.0% |
| !!! | ATAAAAGTATTTTATGGATG+GGG | - | chr7.4:38664117-38664136 | None:intergenic | 20.0% |
| !!! | ATAGTTTAATTTAACTAAGC+AGG | + | chr7.4:38664269-38664288 | MS.gene055111:intron | 20.0% |
| !!! | CATAAAAGTATTTTATGGAT+GGG | - | chr7.4:38664118-38664137 | None:intergenic | 20.0% |
| !!! | CCTCCATATTTTATTTAAAT+AGG | + | chr7.4:38664447-38664466 | MS.gene055111:intron | 20.0% |
| !!! | CTAATTTAGCTTCTAAAAAA+AGG | + | chr7.4:38665241-38665260 | MS.gene055111:intron | 20.0% |
| !!! | TAGTTTAATTTAACTAAGCA+GGG | + | chr7.4:38664270-38664289 | MS.gene055111:intron | 20.0% |
| ! | AAACAACCACATTAAATTTG+TGG | - | chr7.4:38664013-38664032 | None:intergenic | 25.0% |
| ! | AACAACCACATTAAATTTGT+GGG | - | chr7.4:38664012-38664031 | None:intergenic | 25.0% |
| ! | AATATTGATGGAAAGGATAA+AGG | + | chr7.4:38663205-38663224 | MS.gene055111:CDS | 25.0% |
| ! | AATTAACCACTAATAAGTTC+AGG | + | chr7.4:38661744-38661763 | MS.gene055111:intron | 25.0% |
| ! | ACTGCATTTATGTTTAAGTA+GGG | + | chr7.4:38662111-38662130 | MS.gene055111:intron | 25.0% |
| ! | ATAGCATTCAACCATAATTA+AGG | - | chr7.4:38664222-38664241 | None:intergenic | 25.0% |
| ! | ATATGATGCATCCTTAATTA+TGG | + | chr7.4:38664208-38664227 | MS.gene055111:intron | 25.0% |
| ! | ATTATTGATCAATATAGTGC+TGG | - | chr7.4:38662965-38662984 | None:intergenic | 25.0% |
| ! | CACAAGATAAGAAAAACTTT+AGG | + | chr7.4:38664866-38664885 | MS.gene055111:intron | 25.0% |
| ! | CTAATTTCATGATCTATTAC+TGG | - | chr7.4:38662849-38662868 | None:intergenic | 25.0% |
| ! | CTGATTTAAACTTTGTGTTA+TGG | + | chr7.4:38661499-38661518 | MS.gene055111:intron | 25.0% |
| ! | GAACTTATTAGTGGTTAATT+TGG | - | chr7.4:38661744-38661763 | None:intergenic | 25.0% |
| ! | GATAAATTAGAACAAAGAAG+TGG | + | chr7.4:38661258-38661277 | MS.gene055111:intron | 25.0% |
| ! | GTATACATTCATCAAAACAA+GGG | + | chr7.4:38664479-38664498 | MS.gene055111:intron | 25.0% |
| ! | GTGATAGAGCTAATAAATAA+AGG | - | chr7.4:38664424-38664443 | None:intergenic | 25.0% |
| ! | TACTGCATTTATGTTTAAGT+AGG | + | chr7.4:38662110-38662129 | MS.gene055111:intron | 25.0% |
| ! | TGGACATTATAAAGAAAATC+AGG | + | chr7.4:38663516-38663535 | MS.gene055111:CDS | 25.0% |
| ! | TGTATACATTCATCAAAACA+AGG | + | chr7.4:38664478-38664497 | MS.gene055111:intron | 25.0% |
| ! | TGTTGACATATGTAGAAAAA+GGG | - | chr7.4:38664705-38664724 | None:intergenic | 25.0% |
| ! | TTAAAACCTGAACTTATTAG+TGG | - | chr7.4:38661753-38661772 | None:intergenic | 25.0% |
| ! | TTGACATTATATAGAGTCAA+TGG | + | chr7.4:38665037-38665056 | MS.gene055111:intron | 25.0% |
| ! | TTGTTGACATATGTAGAAAA+AGG | - | chr7.4:38664706-38664725 | None:intergenic | 25.0% |
| ! | TTTGTCAAAAAGAAAGTTTG+AGG | - | chr7.4:38663985-38664004 | None:intergenic | 25.0% |
| !! | AAACCTTGGAAATTATTTTC+AGG | + | chr7.4:38663439-38663458 | MS.gene055111:intron | 25.0% |
| !! | AACAGTGTTATATATGCTTT+TGG | - | chr7.4:38664739-38664758 | None:intergenic | 25.0% |
| !! | ACAGTGTTATATATGCTTTT+GGG | - | chr7.4:38664738-38664757 | None:intergenic | 25.0% |
| !! | CATGATGATATCTAATTTTG+TGG | + | chr7.4:38662380-38662399 | MS.gene055111:intron | 25.0% |
| !! | GCAACAGGTAATATATTTTA+GGG | - | chr7.4:38662238-38662257 | None:intergenic | 25.0% |
| !! | TGATTTTCTTTATAATGTCC+AGG | - | chr7.4:38663517-38663536 | None:intergenic | 25.0% |
| !! | TGCAACAGGTAATATATTTT+AGG | - | chr7.4:38662239-38662258 | None:intergenic | 25.0% |
| !! | TTTCACAAATCGAATTTTCA+CGG | + | chr7.4:38663370-38663389 | MS.gene055111:intron | 25.0% |
| !! | TTTTGTAAGTATGAGACAAA+TGG | + | chr7.4:38662165-38662184 | MS.gene055111:intron | 25.0% |
| !! | TTTTGTTCACCATGTTAAAA+TGG | + | chr7.4:38661897-38661916 | MS.gene055111:intron | 25.0% |
| !!! | AATTTGGTGTTTAGAAGAAA+CGG | - | chr7.4:38661728-38661747 | None:intergenic | 25.0% |
| !!! | ATAATTTCCAAGGTTTTAAG+GGG | - | chr7.4:38663435-38663454 | None:intergenic | 25.0% |
| !!! | TGTATCATGATTTTGATTCT+GGG | + | chr7.4:38661220-38661239 | MS.gene055111:intron | 25.0% |
| !!! | TTGTATCATGATTTTGATTC+TGG | + | chr7.4:38661219-38661238 | MS.gene055111:intron | 25.0% |
| AAAATGGTGAGAAACAGTAT+CGG | + | chr7.4:38661913-38661932 | MS.gene055111:intron | 30.0% | |
| AAAATTGTACCTGATAGAAG+AGG | - | chr7.4:38661134-38661153 | None:intergenic | 30.0% | |
| AAAGCTGATGTTGATATCAA+AGG | + | chr7.4:38664775-38664794 | MS.gene055111:intron | 30.0% | |
| AAATGGCTAATCCACTTATA+GGG | + | chr7.4:38662991-38663010 | MS.gene055111:intron | 30.0% | |
| AACATGGTGAACAAAAATCA+CGG | - | chr7.4:38661893-38661912 | None:intergenic | 30.0% | |
| AACTTCCCACAAATTTAATG+TGG | + | chr7.4:38664004-38664023 | MS.gene055111:intron | 30.0% | |
| AATATTCTGAATCTGCACAA+CGG | - | chr7.4:38665311-38665330 | None:intergenic | 30.0% | |
| ACACACAGTTATTATACCTT+CGG | - | chr7.4:38662324-38662343 | None:intergenic | 30.0% | |
| ACCAAAGTGAAATTAAGAAC+AGG | - | chr7.4:38662547-38662566 | None:intergenic | 30.0% | |
| AGAGAATGATCTAAACCTAA+TGG | - | chr7.4:38664632-38664651 | None:intergenic | 30.0% | |
| AGTTCAATTATGCAATACTC+AGG | + | chr7.4:38665638-38665657 | MS.gene055111:CDS | 30.0% | |
| ATAAAATGTGATGTATGTCG+TGG | + | chr7.4:38664804-38664823 | MS.gene055111:intron | 30.0% | |
| ATAAACCACTATTGTTACCA+AGG | + | chr7.4:38661538-38661557 | MS.gene055111:intron | 30.0% | |
| ATCAAGAAAAGTTGCAATAG+AGG | + | chr7.4:38664961-38664980 | MS.gene055111:intron | 30.0% | |
| ATTGCATAATTGAACTCCTT+TGG | - | chr7.4:38665634-38665653 | None:intergenic | 30.0% | |
| CAACCTGAAAATAATTTCCA+AGG | - | chr7.4:38663445-38663464 | None:intergenic | 30.0% | |
| CAATGATATAGACCGTAATA+TGG | + | chr7.4:38662444-38662463 | MS.gene055111:intron | 30.0% | |
| CCAAAGTGAAATTAAGAACA+GGG | - | chr7.4:38662546-38662565 | None:intergenic | 30.0% | |
| CTATATTGTAGGAAATGACA+GGG | + | chr7.4:38665842-38665861 | MS.gene055111:CDS | 30.0% | |
| CTGCATTTATGTTTAAGTAG+GGG | + | chr7.4:38662112-38662131 | MS.gene055111:intron | 30.0% | |
| GAAAAAGATGTGAGTGTTTA+AGG | + | chr7.4:38664830-38664849 | MS.gene055111:intron | 30.0% | |
| GAAACAATCAGAAACAAGAA+AGG | - | chr7.4:38661455-38661474 | None:intergenic | 30.0% | |
| GAAGACTGTAATGTTTATGT+TGG | + | chr7.4:38663118-38663137 | MS.gene055111:CDS | 30.0% | |
| GAATGATCATATGCTTTAGT+TGG | + | chr7.4:38664069-38664088 | MS.gene055111:intron | 30.0% | |
| GAGAATGATCTAAACCTAAT+GGG | - | chr7.4:38664631-38664650 | None:intergenic | 30.0% | |
| GCAATGTAGCCATTATAAAA+TGG | + | chr7.4:38663868-38663887 | MS.gene055111:CDS | 30.0% | |
| GGATACGTTTATAGAAGAAA+GGG | + | chr7.4:38663147-38663166 | MS.gene055111:CDS | 30.0% | |
| TAGAACAAAGAAGTGGAAAA+TGG | + | chr7.4:38661265-38661284 | MS.gene055111:intron | 30.0% | |
| TATTGAAGAACATTGTGATG+AGG | - | chr7.4:38661169-38661188 | None:intergenic | 30.0% | |
| TATTGTCTATAGCATATCGA+GGG | - | chr7.4:38662092-38662111 | None:intergenic | 30.0% | |
| TCCTACAATATAGAAACTGA+AGG | - | chr7.4:38665835-38665854 | None:intergenic | 30.0% | |
| TCCTTCAGTTTCTATATTGT+AGG | + | chr7.4:38665831-38665850 | MS.gene055111:CDS | 30.0% | |
| TCTATATTGTAGGAAATGAC+AGG | + | chr7.4:38665841-38665860 | MS.gene055111:CDS | 30.0% | |
| TGGATACGTTTATAGAAGAA+AGG | + | chr7.4:38663146-38663165 | MS.gene055111:CDS | 30.0% | |
| TGTGTGAAATGTAATGGTAA+AGG | + | chr7.4:38663765-38663784 | MS.gene055111:CDS | 30.0% | |
| TTATTATACCTTCGGAATTC+AGG | - | chr7.4:38662316-38662335 | None:intergenic | 30.0% | |
| TTCTCAATAACTTCAGAATG+AGG | - | chr7.4:38663316-38663335 | None:intergenic | 30.0% | |
| TTTCATTCTTACACAATACG+CGG | + | chr7.4:38661995-38662014 | MS.gene055111:intron | 30.0% | |
| ! | CTGCTTATTATTTGAAGTGT+TGG | + | chr7.4:38662718-38662737 | MS.gene055111:intron | 30.0% |
| ! | GCTTCTAAAAAAAGGAACAA+AGG | + | chr7.4:38665249-38665268 | MS.gene055111:intron | 30.0% |
| ! | GTCTCTCTTTTCAATTTTGA+TGG | + | chr7.4:38661476-38661495 | MS.gene055111:intron | 30.0% |
| ! | TAAAACCTTGGTAACAATAG+TGG | - | chr7.4:38661546-38661565 | None:intergenic | 30.0% |
| ! | TGAAGGGTACAAATAGAAAA+GGG | - | chr7.4:38663273-38663292 | None:intergenic | 30.0% |
| ! | TTTTCTATTTGTACCCTTCA+GGG | + | chr7.4:38663273-38663292 | MS.gene055111:CDS | 30.0% |
| !! | ATTATTTTCAAGGCTTGTTC+TGG | + | chr7.4:38662872-38662891 | MS.gene055111:intron | 30.0% |
| !! | GAAGTGTTGTAATGTTATCA+TGG | + | chr7.4:38662502-38662521 | MS.gene055111:intron | 30.0% |
| !! | TCTGAAAGAAGTATTAGTTG+TGG | + | chr7.4:38662411-38662430 | MS.gene055111:intron | 30.0% |
| !! | TGTTTCTCACCATTTTAACA+TGG | - | chr7.4:38661909-38661928 | None:intergenic | 30.0% |
| !!! | AAATTATTTTCAGGTTGTGC+CGG | + | chr7.4:38663448-38663467 | MS.gene055111:intron | 30.0% |
| !!! | GTTACCAAGGTTTTAAATAG+TGG | + | chr7.4:38661551-38661570 | MS.gene055111:intron | 30.0% |
| !!! | TAATTTCCAAGGTTTTAAGG+GGG | - | chr7.4:38663434-38663453 | None:intergenic | 30.0% |
| !!! | TTTCGCGATTTTAGCTATTA+CGG | + | chr7.4:38661591-38661610 | MS.gene055111:intron | 30.0% |
| AAACTTTGTGTTATGGTTCC+TGG | + | chr7.4:38661506-38661525 | MS.gene055111:intron | 35.0% | |
| AAAGAATCAGCAAAAAAGGC+AGG | - | chr7.4:38665678-38665697 | None:intergenic | 35.0% | |
| AAATTTATTCCAGAGTCCAC+TGG | - | chr7.4:38663959-38663978 | None:intergenic | 35.0% | |
| AACAAAAATCACGGAAACGA+CGG | - | chr7.4:38661884-38661903 | None:intergenic | 35.0% | |
| AACCAACATCTGCCATATTA+CGG | - | chr7.4:38662459-38662478 | None:intergenic | 35.0% | |
| AAGGATACATCATACATGCA+AGG | - | chr7.4:38664405-38664424 | None:intergenic | 35.0% | |
| AATCTTGCTACCAGACTTAA+AGG | - | chr7.4:38664296-38664315 | None:intergenic | 35.0% | |
| AATTCCCAAATACCAAGTTC+AGG | - | chr7.4:38663232-38663251 | None:intergenic | 35.0% | |
| ACATACAATCTCAGTTGTTC+CGG | + | chr7.4:38665776-38665795 | MS.gene055111:CDS | 35.0% | |
| AGAAATGCTCAGGTAAATTC+TGG | + | chr7.4:38663332-38663351 | MS.gene055111:intron | 35.0% | |
| AGCAGAAGATAATAGTTGAG+GGG | + | chr7.4:38662616-38662635 | MS.gene055111:intron | 35.0% | |
| AGCCTTAAATTCTTCGTTGA+TGG | + | chr7.4:38664892-38664911 | MS.gene055111:intron | 35.0% | |
| ATTGAACTCCTTTGGATCTA+TGG | - | chr7.4:38665626-38665645 | None:intergenic | 35.0% | |
| CAAATAGTATAAGTTTCGGC+AGG | - | chr7.4:38664372-38664391 | None:intergenic | 35.0% | |
| CAAATGGCTAATCCACTTAT+AGG | + | chr7.4:38662990-38663009 | MS.gene055111:intron | 35.0% | |
| CAAATGTTGAATTCAAGCCA+AGG | + | chr7.4:38663658-38663677 | MS.gene055111:intron | 35.0% | |
| CATCTGCAAGAACATGTAAA+TGG | - | chr7.4:38663747-38663766 | None:intergenic | 35.0% | |
| CCCTGTTCTTAATTTCACTT+TGG | + | chr7.4:38662543-38662562 | MS.gene055111:intron | 35.0% | |
| CGGTTTATTCAAATTCCACT+AGG | - | chr7.4:38662063-38662082 | None:intergenic | 35.0% | |
| CTAAATTAGCCCACTCAAAT+TGG | - | chr7.4:38665230-38665249 | None:intergenic | 35.0% | |
| CTTAACTGTGAAACGTGTAA+TGG | + | chr7.4:38663825-38663844 | MS.gene055111:CDS | 35.0% | |
| GAAGTTATTGAGAAATGCTC+AGG | + | chr7.4:38663322-38663341 | MS.gene055111:CDS | 35.0% | |
| GAGCAGAAGATAATAGTTGA+GGG | + | chr7.4:38662615-38662634 | MS.gene055111:intron | 35.0% | |
| GATAAACTTCTAATCGTGTG+TGG | + | chr7.4:38662791-38662810 | MS.gene055111:intron | 35.0% | |
| GATCTATGGAAAACTTCATC+GGG | - | chr7.4:38665612-38665631 | None:intergenic | 35.0% | |
| GCCTTAAATTCTTCGTTGAT+GGG | + | chr7.4:38664893-38664912 | MS.gene055111:intron | 35.0% | |
| GGATCTATGGAAAACTTCAT+CGG | - | chr7.4:38665613-38665632 | None:intergenic | 35.0% | |
| GGTTTGATTGCTCATAAAGA+TGG | + | chr7.4:38663568-38663587 | MS.gene055111:CDS | 35.0% | |
| GTATTGTCTATAGCATATCG+AGG | - | chr7.4:38662093-38662112 | None:intergenic | 35.0% | |
| GTATTTGGGAATTGGATCTA+AGG | + | chr7.4:38663239-38663258 | MS.gene055111:CDS | 35.0% | |
| GTGGTTTATTGAACATTTCC+AGG | - | chr7.4:38661527-38661546 | None:intergenic | 35.0% | |
| TAATGTTTATGTTGGAACGC+TGG | + | chr7.4:38663126-38663145 | MS.gene055111:CDS | 35.0% | |
| TACACCCAATCTAAACGTTA+AGG | - | chr7.4:38661847-38661866 | None:intergenic | 35.0% | |
| TCCCATCAACGAAGAATTTA+AGG | - | chr7.4:38664897-38664916 | None:intergenic | 35.0% | |
| TGAACTTGGTATTTGGGAAT+TGG | + | chr7.4:38663231-38663250 | MS.gene055111:CDS | 35.0% | |
| TGAGCAGAAGATAATAGTTG+AGG | + | chr7.4:38662614-38662633 | MS.gene055111:intron | 35.0% | |
| TGCAATAGAGGTTGCTAATA+AGG | + | chr7.4:38664973-38664992 | MS.gene055111:intron | 35.0% | |
| TGCAGATGTGTGAAATGTAA+TGG | + | chr7.4:38663759-38663778 | MS.gene055111:intron | 35.0% | |
| TGGTGGAAATATTGATGGAA+AGG | + | chr7.4:38663198-38663217 | MS.gene055111:CDS | 35.0% | |
| TTAAAAAACACATGCTCCAG+TGG | + | chr7.4:38663940-38663959 | MS.gene055111:intron | 35.0% | |
| TTCCATCAATATTTCCACCA+GGG | - | chr7.4:38663198-38663217 | None:intergenic | 35.0% | |
| TTTCCATCAATATTTCCACC+AGG | - | chr7.4:38663199-38663218 | None:intergenic | 35.0% | |
| ! | ATTACCCCTCTAGATTTTGT+TGG | + | chr7.4:38665883-38665902 | MS.gene055111:CDS | 35.0% |
| ! | CTGAAGGGTACAAATAGAAA+AGG | - | chr7.4:38663274-38663293 | None:intergenic | 35.0% |
| ! | CTTTTCTATTTGTACCCTTC+AGG | + | chr7.4:38663272-38663291 | MS.gene055111:CDS | 35.0% |
| ! | GAAGTTTTCCATAGATCCAA+AGG | + | chr7.4:38665615-38665634 | MS.gene055111:CDS | 35.0% |
| ! | GTTTGATGATACTTGTGATG+CGG | + | chr7.4:38665086-38665105 | MS.gene055111:intron | 35.0% |
| ! | TTACCCCTCTAGATTTTGTT+GGG | + | chr7.4:38665884-38665903 | MS.gene055111:CDS | 35.0% |
| !! | CTGCATTTCTTTTCTGAAGA+TGG | + | chr7.4:38663694-38663713 | MS.gene055111:intron | 35.0% |
| !!! | AATTATTTTCAGGTTGTGCC+GGG | + | chr7.4:38663449-38663468 | MS.gene055111:intron | 35.0% |
| AAACCCCTTCCATAACAACT+AGG | - | chr7.4:38663553-38663572 | None:intergenic | 40.0% | |
| AACGTTAAGGTCGCAACAAA+CGG | - | chr7.4:38661834-38661853 | None:intergenic | 40.0% | |
| AACTTCAACCACTCCAAACA+AGG | - | chr7.4:38665918-38665937 | None:intergenic | 40.0% | |
| AAGCCCCAACAAAATCTAGA+GGG | - | chr7.4:38665891-38665910 | None:intergenic | 40.0% | |
| AAGGACCTGAACTTGGTATT+TGG | + | chr7.4:38663224-38663243 | MS.gene055111:CDS | 40.0% | |
| AAGGATAAAGGACCTGAACT+TGG | + | chr7.4:38663217-38663236 | MS.gene055111:CDS | 40.0% | |
| AATGTGATGTATGTCGTGGT+TGG | + | chr7.4:38664808-38664827 | MS.gene055111:intron | 40.0% | |
| ACAGGAAGACACTTTCAACT+CGG | + | chr7.4:38665553-38665572 | MS.gene055111:intron | 40.0% | |
| ACGGTCTATTACCGTGAAAA+CGG | - | chr7.4:38661965-38661984 | None:intergenic | 40.0% | |
| ACTCAGTGTCCTAGTTGTTA+TGG | + | chr7.4:38663541-38663560 | MS.gene055111:CDS | 40.0% | |
| AGGACCTGAACTTGGTATTT+GGG | + | chr7.4:38663225-38663244 | MS.gene055111:CDS | 40.0% | |
| AGTAAGTGCAACTAAAGGAG+CGG | + | chr7.4:38665578-38665597 | MS.gene055111:CDS | 40.0% | |
| AGTGTCCTAGTTGTTATGGA+AGG | + | chr7.4:38663545-38663564 | MS.gene055111:CDS | 40.0% | |
| ATCCAAGGTTTCCCTATAAG+TGG | - | chr7.4:38663005-38663024 | None:intergenic | 40.0% | |
| ATCCACTTATAGGGAAACCT+TGG | + | chr7.4:38663000-38663019 | MS.gene055111:intron | 40.0% | |
| ATGGAACAACCTCTTCTATC+AGG | + | chr7.4:38661122-38661141 | MS.gene055111:CDS | 40.0% | |
| CGGAAAGTAAGTGCAACTAA+AGG | + | chr7.4:38665573-38665592 | MS.gene055111:CDS | 40.0% | |
| GAATCAAAACTGAGACCTTG+AGG | - | chr7.4:38665199-38665218 | None:intergenic | 40.0% | |
| GCAGAAGATAATAGTTGAGG+GGG | + | chr7.4:38662617-38662636 | MS.gene055111:intron | 40.0% | |
| GCGAAATCTATACCTGACTT+CGG | - | chr7.4:38661577-38661596 | None:intergenic | 40.0% | |
| GCGACCTTAACGTTTAGATT+GGG | + | chr7.4:38661840-38661859 | MS.gene055111:intron | 40.0% | |
| GTCAAATAGCAGCTATAGCA+TGG | + | chr7.4:38662034-38662053 | MS.gene055111:intron | 40.0% | |
| GTGTCCTAGTTGTTATGGAA+GGG | + | chr7.4:38663546-38663565 | MS.gene055111:CDS | 40.0% | |
| GTTACTATCCTCCTGTTCAT+GGG | + | chr7.4:38661388-38661407 | MS.gene055111:CDS | 40.0% | |
| GTTGCTTATCAAGGTGGATA+TGG | + | chr7.4:38662268-38662287 | MS.gene055111:CDS | 40.0% | |
| TACCCTGGTGGAAATATTGA+TGG | + | chr7.4:38663193-38663212 | MS.gene055111:CDS | 40.0% | |
| TAGCATATCGAGGGATATAG+CGG | - | chr7.4:38662083-38662102 | None:intergenic | 40.0% | |
| TATTGTAGGAAATGACAGGG+AGG | + | chr7.4:38665845-38665864 | MS.gene055111:CDS | 40.0% | |
| TCAACACTTACACATGTTCC+AGG | - | chr7.4:38661330-38661349 | None:intergenic | 40.0% | |
| TCAATATTTCCACCAGGGTA+TGG | - | chr7.4:38663193-38663212 | None:intergenic | 40.0% | |
| TCGTATCTCTACTTCATCCA+AGG | - | chr7.4:38663020-38663039 | None:intergenic | 40.0% | |
| TGACAGGGAGGTTTACTTAA+AGG | + | chr7.4:38665857-38665876 | MS.gene055111:CDS | 40.0% | |
| TGCGACCTTAACGTTTAGAT+TGG | + | chr7.4:38661839-38661858 | MS.gene055111:intron | 40.0% | |
| TGTCCTAGTTGTTATGGAAG+GGG | + | chr7.4:38663547-38663566 | MS.gene055111:CDS | 40.0% | |
| TTACTATCCTCCTGTTCATG+GGG | + | chr7.4:38661389-38661408 | MS.gene055111:CDS | 40.0% | |
| TTCACTTTGGTCGTGCTTTA+TGG | + | chr7.4:38662556-38662575 | MS.gene055111:intron | 40.0% | |
| TTTAAATAGTGGCCGAAGTC+AGG | + | chr7.4:38661562-38661581 | MS.gene055111:intron | 40.0% | |
| ! | AAAGGCTTTTGTAACCCACT+TGG | + | chr7.4:38665130-38665149 | MS.gene055111:intron | 40.0% |
| ! | AAGGCTTTTGTAACCCACTT+GGG | + | chr7.4:38665131-38665150 | MS.gene055111:intron | 40.0% |
| ! | GTACAAGCTGTTGCTTATCA+AGG | + | chr7.4:38662259-38662278 | MS.gene055111:intron | 40.0% |
| ! | TACCCCTCTAGATTTTGTTG+GGG | + | chr7.4:38665885-38665904 | MS.gene055111:CDS | 40.0% |
| ! | TCGGCCACTATTTAAAACCT+TGG | - | chr7.4:38661558-38661577 | None:intergenic | 40.0% |
| ! | TGTGAAACGTGTAATGGAAG+TGG | + | chr7.4:38663831-38663850 | MS.gene055111:CDS | 40.0% |
| !! | AACCTAATGGGCTTGCTTAA+TGG | - | chr7.4:38664619-38664638 | None:intergenic | 40.0% |
| !! | ACCTAATGGGCTTGCTTAAT+GGG | - | chr7.4:38664618-38664637 | None:intergenic | 40.0% |
| ACGTTGGTCATCGTTGTTGT+TGG | + | chr7.4:38663056-38663075 | MS.gene055111:CDS | 45.0% | |
| AGCCCCAACAAAATCTAGAG+GGG | - | chr7.4:38665890-38665909 | None:intergenic | 45.0% | |
| ATACCTTCGGAATTCAGGTC+TGG | - | chr7.4:38662311-38662330 | None:intergenic | 45.0% | |
| ATAGTTGAGGGGGAAAGAAC+AGG | + | chr7.4:38662627-38662646 | MS.gene055111:intron | 45.0% | |
| ATGGAGCTCATATGAGCATG+TGG | + | chr7.4:38661284-38661303 | MS.gene055111:CDS | 45.0% | |
| CAAGAAAGGAACATACCAGC+AGG | - | chr7.4:38661441-38661460 | None:intergenic | 45.0% | |
| CAAGCCAAGGTCAAATGTCT+AGG | + | chr7.4:38663671-38663690 | MS.gene055111:intron | 45.0% | |
| CAAGCCCCAACAAAATCTAG+AGG | - | chr7.4:38665892-38665911 | None:intergenic | 45.0% | |
| CGTTTAGATTGGGTGTAACG+AGG | + | chr7.4:38661850-38661869 | MS.gene055111:intron | 45.0% | |
| CTCACAAATGACTCTTGCAG+TGG | - | chr7.4:38665754-38665773 | None:intergenic | 45.0% | |
| GAATCTTCCATGTTCGAGCA+GGG | - | chr7.4:38663090-38663109 | None:intergenic | 45.0% | |
| GACCGTAATATGGCAGATGT+TGG | + | chr7.4:38662454-38662473 | MS.gene055111:intron | 45.0% | |
| GATGGGATAGTTGTCTGACA+TGG | + | chr7.4:38664910-38664929 | MS.gene055111:intron | 45.0% | |
| GCTACTCTTCACTTCGTAGT+AGG | + | chr7.4:38662761-38662780 | MS.gene055111:intron | 45.0% | |
| GCTTATCAAGGTGGATATGG+AGG | + | chr7.4:38662271-38662290 | MS.gene055111:CDS | 45.0% | |
| GGATAGTAACCTGCAGAAGA+AGG | - | chr7.4:38661378-38661397 | None:intergenic | 45.0% | |
| GGATATGGAGGAGATTATGG+TGG | + | chr7.4:38662283-38662302 | MS.gene055111:CDS | 45.0% | |
| GGATGTTGCGTTACGAATTG+CGG | + | chr7.4:38661612-38661631 | MS.gene055111:intron | 45.0% | |
| GGTGGATATGGAGGAGATTA+TGG | + | chr7.4:38662280-38662299 | MS.gene055111:CDS | 45.0% | |
| GGTTACTATCCTCCTGTTCA+TGG | + | chr7.4:38661387-38661406 | MS.gene055111:CDS | 45.0% | |
| GTGGTATTGTCTTGGGACTT+GGG | + | chr7.4:38665162-38665181 | MS.gene055111:intron | 45.0% | |
| TAACCTGCAGAAGAAGGAAC+AGG | - | chr7.4:38661372-38661391 | None:intergenic | 45.0% | |
| TACTATCCTCCTGTTCATGG+GGG | + | chr7.4:38661390-38661409 | MS.gene055111:CDS | 45.0% | |
| TCAAAACTGAGACCTTGAGG+AGG | - | chr7.4:38665196-38665215 | None:intergenic | 45.0% | |
| TGAAAACGGCTGCGACAAAA+AGG | - | chr7.4:38661951-38661970 | None:intergenic | 45.0% | |
| TGAATCTTCCATGTTCGAGC+AGG | - | chr7.4:38663091-38663110 | None:intergenic | 45.0% | |
| TGCTCGAACATGGAAGATTC+AGG | + | chr7.4:38663090-38663109 | MS.gene055111:CDS | 45.0% | |
| TGGAGCTCATATGAGCATGT+GGG | + | chr7.4:38661285-38661304 | MS.gene055111:CDS | 45.0% | |
| TGTGCTACATGCAATGCTGA+TGG | + | chr7.4:38663487-38663506 | MS.gene055111:CDS | 45.0% | |
| TTAAGGTCGCAACAAACGGT+AGG | - | chr7.4:38661830-38661849 | None:intergenic | 45.0% | |
| TTACCTCCCCCTTAAAACCT+TGG | + | chr7.4:38663425-38663444 | MS.gene055111:intron | 45.0% | |
| TTAGCCCACTCAAATTGGCA+CGG | - | chr7.4:38665225-38665244 | None:intergenic | 45.0% | |
| ! | CAAAAAAGGCAGGAGTGCAT+TGG | - | chr7.4:38665668-38665687 | None:intergenic | 45.0% |
| ! | CAAGCTGTTGCTTATCAAGG+TGG | + | chr7.4:38662262-38662281 | MS.gene055111:CDS | 45.0% |
| ! | CGTTGGTCATCGTTGTTGTT+GGG | + | chr7.4:38663057-38663076 | MS.gene055111:CDS | 45.0% |
| ! | CTTTTGTAACCCACTTGGGT+TGG | + | chr7.4:38665135-38665154 | MS.gene055111:intron | 45.0% |
| ! | GTTGGTCATCGTTGTTGTTG+GGG | + | chr7.4:38663058-38663077 | MS.gene055111:CDS | 45.0% |
| ! | TTTTCACGCACTTCCCTGAA+GGG | - | chr7.4:38663289-38663308 | None:intergenic | 45.0% |
| !! | TTTTGTCGCAGCCGTTTTCA+CGG | + | chr7.4:38661951-38661970 | MS.gene055111:intron | 45.0% |
| !!! | TTTCCAAGGTTTTAAGGGGG+AGG | - | chr7.4:38663431-38663450 | None:intergenic | 45.0% |
| AAAGAGACAGAGCCATACCC+TGG | + | chr7.4:38663178-38663197 | MS.gene055111:CDS | 50.0% | |
| AAGCTTCCTTGTGCGACTTG+TGG | + | chr7.4:38663789-38663808 | MS.gene055111:CDS | 50.0% | |
| AGGAACATACCAGCAGGATC+AGG | - | chr7.4:38661435-38661454 | None:intergenic | 50.0% | |
| AGTCCCAAGACAATACCACC+AGG | - | chr7.4:38665161-38665180 | None:intergenic | 50.0% | |
| CAAATGACTCTTGCAGTGGC+AGG | - | chr7.4:38665750-38665769 | None:intergenic | 50.0% | |
| CGAACAGGTTCTGCATATCC+TGG | + | chr7.4:38661309-38661328 | MS.gene055111:CDS | 50.0% | |
| CTAAGCAGGGCCTTTAAGTC+TGG | + | chr7.4:38664283-38664302 | MS.gene055111:intron | 50.0% | |
| GAACCAGACCTGAATTCCGA+AGG | + | chr7.4:38662305-38662324 | MS.gene055111:CDS | 50.0% | |
| GAGCTGCTCATTGATCACGT+TGG | + | chr7.4:38663040-38663059 | MS.gene055111:CDS | 50.0% | |
| GCAACAGCTTGTACTGCAAC+AGG | - | chr7.4:38662253-38662272 | None:intergenic | 50.0% | |
| GCAGCCTAGACATTTGACCT+TGG | - | chr7.4:38663678-38663697 | None:intergenic | 50.0% | |
| GCCCATTAAGCAAGCCCATT+AGG | + | chr7.4:38664614-38664633 | MS.gene055111:intron | 50.0% | |
| GCTATAGCATGGTAGCCTAG+TGG | + | chr7.4:38662045-38662064 | MS.gene055111:intron | 50.0% | |
| GGTGGTATTGTCTTGGGACT+TGG | + | chr7.4:38665161-38665180 | MS.gene055111:intron | 50.0% | |
| TAGCCCACTCAAATTGGCAC+GGG | - | chr7.4:38665224-38665243 | None:intergenic | 50.0% | |
| TATGAGCATGTGGGTCGAAC+AGG | + | chr7.4:38661294-38661313 | MS.gene055111:CDS | 50.0% | |
| TGCAATGCTGATGGAGAACC+TGG | + | chr7.4:38663496-38663515 | MS.gene055111:CDS | 50.0% | |
| TGGCCTGGTGGTATTGTCTT+GGG | + | chr7.4:38665155-38665174 | MS.gene055111:intron | 50.0% | |
| TTGGCCTGGTGGTATTGTCT+TGG | + | chr7.4:38665154-38665173 | MS.gene055111:intron | 50.0% | |
| TTGGGGCTTGTGTCCTTGTT+TGG | + | chr7.4:38665902-38665921 | MS.gene055111:CDS | 50.0% | |
| ! | AAAAGGCAGGAGTGCATTGG+TGG | - | chr7.4:38665665-38665684 | None:intergenic | 50.0% |
| ! | AAAGGCAGGAGTGCATTGGT+GGG | - | chr7.4:38665664-38665683 | None:intergenic | 50.0% |
| ! | CTTTTCACGCACTTCCCTGA+AGG | - | chr7.4:38663290-38663309 | None:intergenic | 50.0% |
| ! | GCTTGTGTCCTTGTTTGGAG+TGG | + | chr7.4:38665907-38665926 | MS.gene055111:CDS | 50.0% |
| ACAGACTATTCCTCCTCGCC+CGG | - | chr7.4:38663470-38663489 | None:intergenic | 55.0% | |
| ACCAAACCCCCATGAACAGG+AGG | - | chr7.4:38661399-38661418 | None:intergenic | 55.0% | |
| AGCCCACTCAAATTGGCACG+GGG | - | chr7.4:38665223-38665242 | None:intergenic | 55.0% | |
| CCAACCAAACCCCCATGAAC+AGG | - | chr7.4:38661402-38661421 | None:intergenic | 55.0% | |
| CGAGATCCACAAGTCGCACA+AGG | - | chr7.4:38663798-38663817 | None:intergenic | 55.0% | |
| CTCCCCGTGCCAATTTGAGT+GGG | + | chr7.4:38665218-38665237 | MS.gene055111:intron | 55.0% | |
| GCGTCACCATGTCTCATCGT+CGG | + | chr7.4:38665805-38665824 | MS.gene055111:CDS | 55.0% | |
| GCTCCTGTTCCTTCTTCTGC+AGG | + | chr7.4:38661366-38661385 | MS.gene055111:CDS | 55.0% | |
| GGATTGCCGACGATGAGACA+TGG | - | chr7.4:38665814-38665833 | None:intergenic | 55.0% | |
| TCATCTGAGCCTGATCCTGC+TGG | + | chr7.4:38661423-38661442 | MS.gene055111:CDS | 55.0% | |
| TCCTCCTGTTCATGGGGGTT+TGG | + | chr7.4:38661395-38661414 | MS.gene055111:CDS | 55.0% | |
| TCTCCCCGTGCCAATTTGAG+TGG | + | chr7.4:38665217-38665236 | MS.gene055111:intron | 55.0% | |
| TCTTCCATGTTCGAGCAGGG+CGG | - | chr7.4:38663087-38663106 | None:intergenic | 55.0% | |
| TGTGCGACTTGTGGATCTCG+TGG | + | chr7.4:38663798-38663817 | MS.gene055111:CDS | 55.0% | |
| ! | ACACATGCTCCAGTGGACTC+TGG | + | chr7.4:38663947-38663966 | MS.gene055111:intron | 55.0% |
| ! | CCTGTTCATGGGGGTTTGGT+TGG | + | chr7.4:38661399-38661418 | MS.gene055111:CDS | 55.0% |
| ! | GACATGGTGACGCGAGTTAC+CGG | - | chr7.4:38665798-38665817 | None:intergenic | 55.0% |
| ACCACCAGGCCAACCCAAGT+GGG | - | chr7.4:38665147-38665166 | None:intergenic | 60.0% | |
| GAGACAGAGCCATACCCTGG+TGG | + | chr7.4:38663181-38663200 | MS.gene055111:CDS | 60.0% | |
| TACCACCAGGCCAACCCAAG+TGG | - | chr7.4:38665148-38665167 | None:intergenic | 60.0% | |
| ! | GTGTGTGTGTGCGCGTTGAC+AGG | + | chr7.4:38665535-38665554 | MS.gene055111:intron | 60.0% |
| ! | TGGGAGTGTGCTCCTCCTCA+AGG | + | chr7.4:38665181-38665200 | MS.gene055111:intron | 60.0% |
| !! | GTAACCCACTTGGGTTGGCC+TGG | + | chr7.4:38665140-38665159 | MS.gene055111:intron | 60.0% |
| !!! | TTTTCAGGTTGTGCCGGGCG+AGG | + | chr7.4:38663454-38663473 | MS.gene055111:intron | 60.0% |
| GTAGCCGCCCTGCTCGAACA+TGG | + | chr7.4:38663080-38663099 | MS.gene055111:CDS | 65.0% | |
| !! | ACCCACTTGGGTTGGCCTGG+TGG | + | chr7.4:38665143-38665162 | MS.gene055111:intron | 65.0% |
| ! | TCAGGTTGTGCCGGGCGAGG+AGG | + | chr7.4:38663457-38663476 | MS.gene055111:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 38661122 | 38665941 | 38661122 | ID=MS.gene055111 |
| chr7.4 | mRNA | 38661122 | 38665941 | 38661122 | ID=MS.gene055111.t1;Parent=MS.gene055111 |
| chr7.4 | exon | 38661122 | 38661143 | 38661122 | ID=MS.gene055111.t1.exon1;Parent=MS.gene055111.t1 |
| chr7.4 | CDS | 38661122 | 38661143 | 38661122 | ID=cds.MS.gene055111.t1;Parent=MS.gene055111.t1 |
| chr7.4 | exon | 38661268 | 38661444 | 38661268 | ID=MS.gene055111.t1.exon2;Parent=MS.gene055111.t1 |
| chr7.4 | CDS | 38661268 | 38661444 | 38661268 | ID=cds.MS.gene055111.t1;Parent=MS.gene055111.t1 |
| chr7.4 | exon | 38662260 | 38662326 | 38662260 | ID=MS.gene055111.t1.exon3;Parent=MS.gene055111.t1 |
| chr7.4 | CDS | 38662260 | 38662326 | 38662260 | ID=cds.MS.gene055111.t1;Parent=MS.gene055111.t1 |
| chr7.4 | exon | 38663012 | 38663343 | 38663012 | ID=MS.gene055111.t1.exon4;Parent=MS.gene055111.t1 |
| chr7.4 | CDS | 38663012 | 38663343 | 38663012 | ID=cds.MS.gene055111.t1;Parent=MS.gene055111.t1 |
| chr7.4 | exon | 38663461 | 38663602 | 38663461 | ID=MS.gene055111.t1.exon5;Parent=MS.gene055111.t1 |
| chr7.4 | CDS | 38663461 | 38663602 | 38663461 | ID=cds.MS.gene055111.t1;Parent=MS.gene055111.t1 |
| chr7.4 | exon | 38663764 | 38663889 | 38663764 | ID=MS.gene055111.t1.exon6;Parent=MS.gene055111.t1 |
| chr7.4 | CDS | 38663764 | 38663889 | 38663764 | ID=cds.MS.gene055111.t1;Parent=MS.gene055111.t1 |
| chr7.4 | exon | 38665557 | 38665941 | 38665557 | ID=MS.gene055111.t1.exon7;Parent=MS.gene055111.t1 |
| chr7.4 | CDS | 38665557 | 38665941 | 38665557 | ID=cds.MS.gene055111.t1;Parent=MS.gene055111.t1 |
| Gene Sequence |
| Protein sequence |
