Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35473.t1 | XP_013460937.1 | 92.8 | 236 | 10 | 2 | 1 | 229 | 1 | 236 | 6.40E-124 | 453.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35473.t1 | A0A072UZV4 | 92.8 | 236 | 10 | 2 | 1 | 229 | 1 | 236 | 4.6e-124 | 453.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene35473 | 0.803217 | 3.87E-49 | -1.69E-46 |
| MS.gene049404 | MS.gene35473 | 0.800014 | 1.76E-48 | -1.69E-46 |
| MS.gene050020 | MS.gene35473 | 0.818537 | 1.86E-52 | -1.69E-46 |
| MS.gene050807 | MS.gene35473 | 0.814524 | 1.47E-51 | -1.69E-46 |
| MS.gene051243 | MS.gene35473 | 0.811805 | 5.83E-51 | -1.69E-46 |
| MS.gene051328 | MS.gene35473 | 0.805485 | 1.30E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene35473 | 0.819996 | 8.66E-53 | -1.69E-46 |
| MS.gene053894 | MS.gene35473 | 0.803059 | 4.18E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene35473 | 0.802355 | 5.83E-49 | -1.69E-46 |
| MS.gene055912 | MS.gene35473 | 0.801223 | 9.96E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene35473 | 0.836354 | 9.83E-57 | -1.69E-46 |
| MS.gene057705 | MS.gene35473 | 0.810578 | 1.08E-50 | -1.69E-46 |
| MS.gene060587 | MS.gene35473 | 0.800506 | 1.40E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35473.t1 | MTR_3g075030 | 92.797 | 236 | 10 | 2 | 1 | 229 | 1 | 236 | 2.27e-160 | 443 |
| MS.gene35473.t1 | MTR_4g103840 | 46.718 | 259 | 90 | 11 | 1 | 224 | 17 | 262 | 6.22e-55 | 177 |
| MS.gene35473.t1 | MTR_6g023190 | 32.463 | 268 | 126 | 9 | 7 | 224 | 28 | 290 | 4.49e-25 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35473.t1 | AT3G48510 | 41.696 | 283 | 97 | 11 | 1 | 224 | 21 | 294 | 1.69e-44 | 150 |
| MS.gene35473.t1 | AT5G50360 | 38.989 | 277 | 108 | 12 | 1 | 224 | 21 | 289 | 1.30e-43 | 148 |
| MS.gene35473.t1 | AT5G63350 | 37.500 | 288 | 110 | 10 | 1 | 224 | 21 | 302 | 5.79e-39 | 137 |
| MS.gene35473.t1 | AT5G40800 | 35.156 | 256 | 127 | 10 | 2 | 224 | 21 | 270 | 1.59e-30 | 114 |
| MS.gene35473.t1 | AT3G27250 | 34.470 | 264 | 125 | 8 | 4 | 224 | 22 | 280 | 1.48e-28 | 109 |
| MS.gene35473.t1 | AT3G27250 | 34.470 | 264 | 125 | 8 | 4 | 224 | 22 | 280 | 1.48e-28 | 109 |
| MS.gene35473.t1 | AT5G40790 | 33.571 | 280 | 125 | 10 | 4 | 224 | 24 | 301 | 3.13e-25 | 100 |
Find 73 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTTATATCGGACGGTTA+TGG | 0.272493 | 3.4:+73620461 | MS.gene35473:CDS |
| AGTAGAGGATCTGGAGTTTC+GGG | 0.311049 | 3.4:-73620206 | None:intergenic |
| GATTTATATCGGACGGTTAT+GGG | 0.323289 | 3.4:+73620462 | MS.gene35473:CDS |
| AAGGACAAGTTTGGTTGGTT+AGG | 0.328445 | 3.4:+73620528 | MS.gene35473:CDS |
| GAGGAAGGAAGTAGAGGATC+TGG | 0.372917 | 3.4:-73620215 | None:intergenic |
| AAGTAGAGGATCTGGAGTTT+CGG | 0.378062 | 3.4:-73620207 | None:intergenic |
| CGAGGAGAGGAAAGTGAAAC+TGG | 0.397568 | 3.4:+73620421 | MS.gene35473:CDS |
| GTGGAGGAATAGTGCATATA+GGG | 0.406861 | 3.4:+73620493 | MS.gene35473:CDS |
| GATCTTACAGCGGTAGGGTT+AGG | 0.420934 | 3.4:+73620311 | MS.gene35473:CDS |
| TCGGAGGCGGTGCATGGCTT+AGG | 0.448865 | 3.4:-73620068 | None:intergenic |
| AGGACAAGTTTGGTTGGTTA+GGG | 0.450227 | 3.4:+73620529 | MS.gene35473:CDS |
| GAATAGTGCATATAGGGAAA+TGG | 0.450785 | 3.4:+73620499 | MS.gene35473:CDS |
| GGCAGCATGGAGATGAAGGC+TGG | 0.454057 | 3.4:+73620372 | MS.gene35473:CDS |
| AAGTGGACAGAATCATGTTA+AGG | 0.454487 | 3.4:+73620030 | MS.gene35473:CDS |
| CGTGGAGGAATAGTGCATAT+AGG | 0.458439 | 3.4:+73620492 | MS.gene35473:CDS |
| TAACATGATTCTGTCCACTT+TGG | 0.465109 | 3.4:-73620027 | None:intergenic |
| AACTGTCCCTCCACCGGCGG+TGG | 0.469426 | 3.4:+73620166 | MS.gene35473:CDS |
| ACTGGAGAAGGACACGTGTC+CGG | 0.470490 | 3.4:+73620439 | MS.gene35473:CDS |
| CTGGAGAAGGACACGTGTCC+GGG | 0.485377 | 3.4:+73620440 | MS.gene35473:CDS |
| GTGAGAGTACAGTACGCGTA+TGG | 0.487916 | 3.4:+73620584 | MS.gene35473:CDS |
| GCCGTGCGATGCGTGGAGAT+TGG | 0.491883 | 3.4:+73620622 | MS.gene35473:CDS |
| TGGTGGGTGAAGGACAAGTT+TGG | 0.508774 | 3.4:+73620519 | MS.gene35473:CDS |
| GTGAAAGAGGATTCACGTGC+AGG | 0.513519 | 3.4:+73620561 | MS.gene35473:CDS |
| CGTGAATCCTCTTTCACTGT+AGG | 0.519583 | 3.4:-73620555 | None:intergenic |
| TCGACGTCGGAGGCGGTGCA+TGG | 0.520028 | 3.4:-73620074 | None:intergenic |
| AGAGTCACCACCGCCGGTGG+AGG | 0.532600 | 3.4:-73620173 | None:intergenic |
| CACGTGTCCGGGATTTATAT+CGG | 0.538547 | 3.4:+73620451 | MS.gene35473:CDS |
| GGGTGAAGGACAAGTTTGGT+TGG | 0.538666 | 3.4:+73620523 | MS.gene35473:CDS |
| CTGGAGTTTCGGGAAGCAGC+GGG | 0.540339 | 3.4:-73620196 | None:intergenic |
| CTTACAGCGGTAGGGTTAGG+AGG | 0.546084 | 3.4:+73620314 | MS.gene35473:CDS |
| AAGGTGGATCTTACAGCGGT+AGG | 0.548232 | 3.4:+73620305 | MS.gene35473:CDS |
| CCTTCTCCGATGTGGTAGCA+TGG | 0.556821 | 3.4:-73620286 | None:intergenic |
| AAAAGCGTCGACGTCGGAGG+CGG | 0.558175 | 3.4:-73620081 | None:intergenic |
| ACGTGGCAGCATGGAGATGA+AGG | 0.562247 | 3.4:+73620368 | MS.gene35473:CDS |
| AGGGTACCCTACAGTGAAAG+AGG | 0.563763 | 3.4:+73620548 | MS.gene35473:CDS |
| TAACCGTCCGATATAAATCC+CGG | 0.564401 | 3.4:-73620458 | None:intergenic |
| TAGTGCATATAGGGAAATGG+TGG | 0.564825 | 3.4:+73620502 | MS.gene35473:CDS |
| GAAGAGTGCCGTGCGATGCG+TGG | 0.568763 | 3.4:+73620615 | MS.gene35473:CDS |
| AGGTGGATCTTACAGCGGTA+GGG | 0.572112 | 3.4:+73620306 | MS.gene35473:CDS |
| TGCTACCACATCGGAGAAGG+TGG | 0.572613 | 3.4:+73620289 | MS.gene35473:CDS |
| AGCGGGAGAGTCACCACCGC+CGG | 0.578527 | 3.4:-73620179 | None:intergenic |
| TATAGGGAAATGGTGGGTGA+AGG | 0.578922 | 3.4:+73620509 | MS.gene35473:CDS |
| GAGTCACCACCGCCGGTGGA+GGG | 0.581071 | 3.4:-73620172 | None:intergenic |
| GTGCATGGCTTAGGAGCGAT+AGG | 0.582617 | 3.4:-73620059 | None:intergenic |
| GTGAATCCTCTTTCACTGTA+GGG | 0.584545 | 3.4:-73620554 | None:intergenic |
| AGAGTAGAGACGACGAGGAG+AGG | 0.588357 | 3.4:+73620408 | MS.gene35473:CDS |
| CCATGCTACCACATCGGAGA+AGG | 0.589985 | 3.4:+73620286 | MS.gene35473:CDS |
| TGAGAGTACAGTACGCGTAT+GGG | 0.590021 | 3.4:+73620585 | MS.gene35473:CDS |
| TTGGCTGAGGAAGGAAGTAG+AGG | 0.590328 | 3.4:-73620221 | None:intergenic |
| AGCTTACGAAATGTCCAAAG+TGG | 0.592157 | 3.4:+73620013 | None:intergenic |
| TCCAATCTCCACGCATCGCA+CGG | 0.601495 | 3.4:-73620623 | None:intergenic |
| TGAAAGAGGATTCACGTGCA+GGG | 0.607088 | 3.4:+73620562 | MS.gene35473:CDS |
| GCAGCATGGAGATGAAGGCT+GGG | 0.611472 | 3.4:+73620373 | MS.gene35473:CDS |
| TGTCTGAGCTTCGAGAATCA+CGG | 0.611686 | 3.4:+73620263 | MS.gene35473:CDS |
| TCTGGAGTTTCGGGAAGCAG+CGG | 0.617319 | 3.4:-73620197 | None:intergenic |
| TTCTCGAAGCTCAGACACAC+CGG | 0.622372 | 3.4:-73620257 | None:intergenic |
| GAGGAAAGTGAAACTGGAGA+AGG | 0.622774 | 3.4:+73620427 | MS.gene35473:CDS |
| AGTGCATATAGGGAAATGGT+GGG | 0.624526 | 3.4:+73620503 | MS.gene35473:CDS |
| ATGGAGATGAAGGCTGGGAG+TGG | 0.626519 | 3.4:+73620378 | MS.gene35473:CDS |
| CTAGAAAGGGAAACAACTCA+AGG | 0.628678 | 3.4:-73620690 | None:intergenic |
| AAGATCCACCTTCTCCGATG+TGG | 0.639110 | 3.4:-73620294 | None:intergenic |
| GCGTGGAGATTGGACTGTGG+TGG | 0.643557 | 3.4:+73620632 | MS.gene35473:CDS |
| GGGAGAGTCACCACCGCCGG+TGG | 0.643642 | 3.4:-73620176 | None:intergenic |
| TGTCCGGGATTTATATCGGA+CGG | 0.666853 | 3.4:+73620455 | MS.gene35473:CDS |
| ACGGTTATGGGAGAGTGACG+TGG | 0.666874 | 3.4:+73620474 | MS.gene35473:CDS |
| AAAACAAACGGTGTAACCGT+CGG | 0.690022 | 3.4:+73620138 | MS.gene35473:CDS |
| TCACGGCCATGCTACCACAT+CGG | 0.701017 | 3.4:+73620280 | MS.gene35473:CDS |
| GATGAAGAGTAGAGACGACG+AGG | 0.704591 | 3.4:+73620403 | MS.gene35473:CDS |
| GTAACTGACACGTGGCAGCA+TGG | 0.705335 | 3.4:+73620359 | MS.gene35473:CDS |
| GTTATGGGAGAGTGACGTGG+AGG | 0.729117 | 3.4:+73620477 | MS.gene35473:CDS |
| TTGAATGCGTAACTGACACG+TGG | 0.739002 | 3.4:+73620351 | MS.gene35473:CDS |
| GGAGAAGGTGGATCTTACAG+CGG | 0.748589 | 3.4:+73620301 | MS.gene35473:CDS |
| GATGCGTGGAGATTGGACTG+TGG | 0.766424 | 3.4:+73620629 | MS.gene35473:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAAATCACTCGAAAAACAAA+CGG | + | chr3.4:73620126-73620145 | MS.gene35473:CDS | 25.0% |
| AAGTGGACAGAATCATGTTA+AGG | + | chr3.4:73620030-73620049 | MS.gene35473:CDS | 35.0% | |
| AGCCAAAAACACAAACAAAC+CGG | + | chr3.4:73620238-73620257 | MS.gene35473:CDS | 35.0% | |
| GAATAGTGCATATAGGGAAA+TGG | + | chr3.4:73620499-73620518 | MS.gene35473:CDS | 35.0% | |
| GATTTATATCGGACGGTTAT+GGG | + | chr3.4:73620462-73620481 | MS.gene35473:CDS | 35.0% | |
| TAACATGATTCTGTCCACTT+TGG | - | chr3.4:73620030-73620049 | None:intergenic | 35.0% | |
| !!! | GTGATTTTTTCTAGATCCGT+CGG | - | chr3.4:73620114-73620133 | None:intergenic | 35.0% |
| !!! | TGATTTTTTCTAGATCCGTC+GGG | - | chr3.4:73620113-73620132 | None:intergenic | 35.0% |
| !!! | TTTGTTTGTGTTTTTGGCTG+AGG | - | chr3.4:73620237-73620256 | None:intergenic | 35.0% |
| AAAACAAACGGTGTAACCGT+CGG | + | chr3.4:73620138-73620157 | MS.gene35473:CDS | 40.0% | |
| AGTGCATATAGGGAAATGGT+GGG | + | chr3.4:73620503-73620522 | MS.gene35473:CDS | 40.0% | |
| CTAGAAAGGGAAACAACTCA+AGG | - | chr3.4:73620693-73620712 | None:intergenic | 40.0% | |
| GGATTTATATCGGACGGTTA+TGG | + | chr3.4:73620461-73620480 | MS.gene35473:CDS | 40.0% | |
| GTGAATCCTCTTTCACTGTA+GGG | - | chr3.4:73620557-73620576 | None:intergenic | 40.0% | |
| GTGGAGGAATAGTGCATATA+GGG | + | chr3.4:73620493-73620512 | MS.gene35473:CDS | 40.0% | |
| TAACCGTCCGATATAAATCC+CGG | - | chr3.4:73620461-73620480 | None:intergenic | 40.0% | |
| TAGTGCATATAGGGAAATGG+TGG | + | chr3.4:73620502-73620521 | MS.gene35473:CDS | 40.0% | |
| ! | AAGGACAAGTTTGGTTGGTT+AGG | + | chr3.4:73620528-73620547 | MS.gene35473:CDS | 40.0% |
| ! | AAGTAGAGGATCTGGAGTTT+CGG | - | chr3.4:73620210-73620229 | None:intergenic | 40.0% |
| ! | AGGACAAGTTTGGTTGGTTA+GGG | + | chr3.4:73620529-73620548 | MS.gene35473:CDS | 40.0% |
| !!! | CACCGGTTTGTTTGTGTTTT+TGG | - | chr3.4:73620243-73620262 | None:intergenic | 40.0% |
| !!! | TTTGTGTTTTTGGCTGAGGA+AGG | - | chr3.4:73620233-73620252 | None:intergenic | 40.0% |
| !!! | TTTTGAAAAAGCGTCGACGT+CGG | - | chr3.4:73620090-73620109 | None:intergenic | 40.0% |
| CACGTGTCCGGGATTTATAT+CGG | + | chr3.4:73620451-73620470 | MS.gene35473:CDS | 45.0% | |
| CGTGAATCCTCTTTCACTGT+AGG | - | chr3.4:73620558-73620577 | None:intergenic | 45.0% | |
| CGTGGAGGAATAGTGCATAT+AGG | + | chr3.4:73620492-73620511 | MS.gene35473:CDS | 45.0% | |
| GAGGAAAGTGAAACTGGAGA+AGG | + | chr3.4:73620427-73620446 | MS.gene35473:CDS | 45.0% | |
| TGAAAGAGGATTCACGTGCA+GGG | + | chr3.4:73620562-73620581 | MS.gene35473:CDS | 45.0% | |
| TGTCCGGGATTTATATCGGA+CGG | + | chr3.4:73620455-73620474 | MS.gene35473:CDS | 45.0% | |
| TGTCTGAGCTTCGAGAATCA+CGG | + | chr3.4:73620263-73620282 | MS.gene35473:CDS | 45.0% | |
| TTGAATGCGTAACTGACACG+TGG | + | chr3.4:73620351-73620370 | MS.gene35473:CDS | 45.0% | |
| ! | AGTAGAGGATCTGGAGTTTC+GGG | - | chr3.4:73620209-73620228 | None:intergenic | 45.0% |
| ! | TGAGAGTACAGTACGCGTAT+GGG | + | chr3.4:73620585-73620604 | MS.gene35473:CDS | 45.0% |
| !! | TATAGGGAAATGGTGGGTGA+AGG | + | chr3.4:73620509-73620528 | MS.gene35473:CDS | 45.0% |
| !!! | GACGCTTTTTCAAAACCCGA+CGG | + | chr3.4:73620095-73620114 | MS.gene35473:CDS | 45.0% |
| AAGATCCACCTTCTCCGATG+TGG | - | chr3.4:73620297-73620316 | None:intergenic | 50.0% | |
| AAGGTGGATCTTACAGCGGT+AGG | + | chr3.4:73620305-73620324 | MS.gene35473:CDS | 50.0% | |
| AGGTGGATCTTACAGCGGTA+GGG | + | chr3.4:73620306-73620325 | MS.gene35473:CDS | 50.0% | |
| CGAGGAGAGGAAAGTGAAAC+TGG | + | chr3.4:73620421-73620440 | MS.gene35473:CDS | 50.0% | |
| GAGAAAAACTGTCCCTCCAC+CGG | + | chr3.4:73620160-73620179 | MS.gene35473:CDS | 50.0% | |
| GAGGAAGGAAGTAGAGGATC+TGG | - | chr3.4:73620218-73620237 | None:intergenic | 50.0% | |
| GATCTTACAGCGGTAGGGTT+AGG | + | chr3.4:73620311-73620330 | MS.gene35473:CDS | 50.0% | |
| GATGAAGAGTAGAGACGACG+AGG | + | chr3.4:73620403-73620422 | MS.gene35473:CDS | 50.0% | |
| GGAGAAGGTGGATCTTACAG+CGG | + | chr3.4:73620301-73620320 | MS.gene35473:CDS | 50.0% | |
| GGGTGAAGGACAAGTTTGGT+TGG | + | chr3.4:73620523-73620542 | MS.gene35473:CDS | 50.0% | |
| GTGAAAGAGGATTCACGTGC+AGG | + | chr3.4:73620561-73620580 | MS.gene35473:CDS | 50.0% | |
| TTCTCGAAGCTCAGACACAC+CGG | - | chr3.4:73620260-73620279 | None:intergenic | 50.0% | |
| TTGGCTGAGGAAGGAAGTAG+AGG | - | chr3.4:73620224-73620243 | None:intergenic | 50.0% | |
| ! | AGGGTACCCTACAGTGAAAG+AGG | + | chr3.4:73620548-73620567 | MS.gene35473:CDS | 50.0% |
| ! | GAGGGACAGTTTTTCTCCGA+CGG | - | chr3.4:73620157-73620176 | None:intergenic | 50.0% |
| ! | GTGAGAGTACAGTACGCGTA+TGG | + | chr3.4:73620584-73620603 | MS.gene35473:CDS | 50.0% |
| ! | TGGTGGGTGAAGGACAAGTT+TGG | + | chr3.4:73620519-73620538 | MS.gene35473:CDS | 50.0% |
| !! | TGGACTGTGGTGGTTTTGCA+TGG | + | chr3.4:73620642-73620661 | MS.gene35473:CDS | 50.0% |
| AAAAACTGTCCCTCCACCGG+CGG | + | chr3.4:73620163-73620182 | MS.gene35473:CDS | 55.0% | |
| ACGGTTATGGGAGAGTGACG+TGG | + | chr3.4:73620474-73620493 | MS.gene35473:CDS | 55.0% | |
| ACGTGGCAGCATGGAGATGA+AGG | + | chr3.4:73620368-73620387 | MS.gene35473:CDS | 55.0% | |
| ACTGGAGAAGGACACGTGTC+CGG | + | chr3.4:73620439-73620458 | MS.gene35473:CDS | 55.0% | |
| AGAGTAGAGACGACGAGGAG+AGG | + | chr3.4:73620408-73620427 | MS.gene35473:CDS | 55.0% | |
| ATGGAGATGAAGGCTGGGAG+TGG | + | chr3.4:73620378-73620397 | MS.gene35473:CDS | 55.0% | |
| CCATGCTACCACATCGGAGA+AGG | + | chr3.4:73620286-73620305 | MS.gene35473:CDS | 55.0% | |
| CCTTCTCCGATGTGGTAGCA+TGG | - | chr3.4:73620289-73620308 | None:intergenic | 55.0% | |
| CTTACAGCGGTAGGGTTAGG+AGG | + | chr3.4:73620314-73620333 | MS.gene35473:CDS | 55.0% | |
| GATGCGTGGAGATTGGACTG+TGG | + | chr3.4:73620629-73620648 | MS.gene35473:CDS | 55.0% | |
| GCAGCATGGAGATGAAGGCT+GGG | + | chr3.4:73620373-73620392 | MS.gene35473:CDS | 55.0% | |
| GTAACTGACACGTGGCAGCA+TGG | + | chr3.4:73620359-73620378 | MS.gene35473:CDS | 55.0% | |
| GTGCATGGCTTAGGAGCGAT+AGG | - | chr3.4:73620062-73620081 | None:intergenic | 55.0% | |
| GTTATGGGAGAGTGACGTGG+AGG | + | chr3.4:73620477-73620496 | MS.gene35473:CDS | 55.0% | |
| TCACGGCCATGCTACCACAT+CGG | + | chr3.4:73620280-73620299 | MS.gene35473:CDS | 55.0% | |
| TCCAATCTCCACGCATCGCA+CGG | - | chr3.4:73620626-73620645 | None:intergenic | 55.0% | |
| TGCTACCACATCGGAGAAGG+TGG | + | chr3.4:73620289-73620308 | MS.gene35473:CDS | 55.0% | |
| ! | TCTGGAGTTTCGGGAAGCAG+CGG | - | chr3.4:73620200-73620219 | None:intergenic | 55.0% |
| !! | TGAAAAAGCGTCGACGTCGG+AGG | - | chr3.4:73620087-73620106 | None:intergenic | 55.0% |
| CTGGAGAAGGACACGTGTCC+GGG | + | chr3.4:73620440-73620459 | MS.gene35473:CDS | 60.0% | |
| CTGGAGTTTCGGGAAGCAGC+GGG | - | chr3.4:73620199-73620218 | None:intergenic | 60.0% | |
| GCGTGGAGATTGGACTGTGG+TGG | + | chr3.4:73620632-73620651 | MS.gene35473:CDS | 60.0% | |
| GGCAGCATGGAGATGAAGGC+TGG | + | chr3.4:73620372-73620391 | MS.gene35473:CDS | 60.0% | |
| !! | AAAAGCGTCGACGTCGGAGG+CGG | - | chr3.4:73620084-73620103 | None:intergenic | 60.0% |
| GCCGTGCGATGCGTGGAGAT+TGG | + | chr3.4:73620622-73620641 | MS.gene35473:CDS | 65.0% | |
| TCGGAGGCGGTGCATGGCTT+AGG | - | chr3.4:73620071-73620090 | None:intergenic | 65.0% | |
| !! | GAAGAGTGCCGTGCGATGCG+TGG | + | chr3.4:73620615-73620634 | MS.gene35473:CDS | 65.0% |
| AACTGTCCCTCCACCGGCGG+TGG | + | chr3.4:73620166-73620185 | MS.gene35473:CDS | 70.0% | |
| AGAGTCACCACCGCCGGTGG+AGG | - | chr3.4:73620176-73620195 | None:intergenic | 70.0% | |
| AGCGGGAGAGTCACCACCGC+CGG | - | chr3.4:73620182-73620201 | None:intergenic | 70.0% | |
| GAGTCACCACCGCCGGTGGA+GGG | - | chr3.4:73620175-73620194 | None:intergenic | 70.0% | |
| TCGACGTCGGAGGCGGTGCA+TGG | - | chr3.4:73620077-73620096 | None:intergenic | 70.0% | |
| GGGAGAGTCACCACCGCCGG+TGG | - | chr3.4:73620179-73620198 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 73620023 | 73620712 | 73620023 | ID=MS.gene35473 |
| chr3.4 | mRNA | 73620023 | 73620712 | 73620023 | ID=MS.gene35473.t1;Parent=MS.gene35473 |
| chr3.4 | exon | 73620023 | 73620712 | 73620023 | ID=MS.gene35473.t1.exon1;Parent=MS.gene35473.t1 |
| chr3.4 | CDS | 73620023 | 73620712 | 73620023 | ID=cds.MS.gene35473.t1;Parent=MS.gene35473.t1 |
| Gene Sequence |
| Protein sequence |
