Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35718.t1 | XP_003596932.1 | 100 | 76 | 0 | 0 | 1 | 76 | 262 | 337 | 3.90E-32 | 147.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35718.t1 | Q8RWC5 | 93.4 | 76 | 5 | 0 | 1 | 76 | 273 | 348 | 6.7e-33 | 141.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35718.t1 | G7IRI1 | 100.0 | 76 | 0 | 0 | 1 | 76 | 262 | 337 | 2.8e-32 | 147.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052732 | MS.gene35718 | 0.835681 | 1.46E-56 | -1.69E-46 |
| MS.gene053144 | MS.gene35718 | 0.829981 | 3.80E-55 | -1.69E-46 |
| MS.gene053174 | MS.gene35718 | 0.805194 | 1.50E-49 | -1.69E-46 |
| MS.gene054550 | MS.gene35718 | 0.82525 | 5.19E-54 | -1.69E-46 |
| MS.gene054584 | MS.gene35718 | 0.836644 | 8.29E-57 | -1.69E-46 |
| MS.gene059297 | MS.gene35718 | 0.874235 | 7.91E-68 | -1.69E-46 |
| MS.gene060884 | MS.gene35718 | 0.8244 | 8.24E-54 | -1.69E-46 |
| MS.gene060886 | MS.gene35718 | 0.82414 | 9.48E-54 | -1.69E-46 |
| MS.gene060888 | MS.gene35718 | 0.82763 | 1.41E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35718.t1 | MTR_2g087810 | 100.000 | 76 | 0 | 0 | 1 | 76 | 262 | 337 | 7.41e-47 | 156 |
| MS.gene35718.t1 | MTR_4g050170 | 94.737 | 76 | 4 | 0 | 1 | 76 | 285 | 360 | 2.54e-45 | 152 |
| MS.gene35718.t1 | MTR_7g106760 | 92.105 | 76 | 6 | 0 | 1 | 76 | 271 | 346 | 2.36e-43 | 147 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35718.t1 | AT3G11700 | 90.789 | 76 | 7 | 0 | 1 | 76 | 287 | 362 | 3.14e-44 | 149 |
| MS.gene35718.t1 | AT2G35860 | 93.421 | 76 | 5 | 0 | 1 | 76 | 273 | 348 | 3.25e-44 | 149 |
| MS.gene35718.t1 | AT3G52370 | 92.105 | 76 | 6 | 0 | 1 | 76 | 265 | 340 | 7.50e-44 | 148 |
| MS.gene35718.t1 | AT5G06390 | 90.789 | 76 | 7 | 0 | 1 | 76 | 284 | 359 | 1.03e-43 | 148 |
| MS.gene35718.t1 | AT3G52370 | 92.105 | 76 | 6 | 0 | 1 | 76 | 318 | 393 | 4.29e-43 | 147 |
Find 28 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAATGCTGTTAGGAGATT+TGG | 0.205388 | 2.1:+14077323 | MS.gene35718:CDS |
| TTCGCCATTGCTTCGTCATT+CGG | 0.307481 | 2.1:-14077209 | None:intergenic |
| TTTGATACTCAGGGATAATA+TGG | 0.322083 | 2.1:-14077286 | None:intergenic |
| ATAATGCTGTTAGGAGATTT+GGG | 0.367717 | 2.1:+14077324 | MS.gene35718:CDS |
| TCTCCGTCGCTAACGACGTT+AGG | 0.380724 | 2.1:-14077142 | None:intergenic |
| CTCTCTTCCGTTTGATACTC+AGG | 0.391445 | 2.1:-14077296 | None:intergenic |
| GGAGATGAGTCGTTTAGTTT+CGG | 0.417291 | 2.1:+14077160 | MS.gene35718:CDS |
| AGAGTATGTATAATGCTGTT+AGG | 0.440029 | 2.1:+14077315 | MS.gene35718:CDS |
| GTTTCTTGCAGGGAAACTAC+TGG | 0.441861 | 2.1:+14078796 | MS.gene35718:intron |
| GAAACAGCATGCTGGATGCT+TGG | 0.462414 | 2.1:+14078818 | MS.gene35718:CDS |
| GACGGAGGAGTTAAGTGAAC+CGG | 0.462493 | 2.1:+14077238 | MS.gene35718:CDS |
| ATTATCTCCTCCGGTGAACC+CGG | 0.518780 | 2.1:-14077257 | None:intergenic |
| TGGTAATACATTATCTCCTC+CGG | 0.519375 | 2.1:-14077266 | None:intergenic |
| GATGAGTCGTTTAGTTTCGG+AGG | 0.520707 | 2.1:+14077163 | MS.gene35718:CDS |
| GTTAAGTGAACCGGGTTCAC+CGG | 0.522544 | 2.1:+14077247 | MS.gene35718:CDS |
| TGCTGTTAGGAGATTTGGGA+AGG | 0.538978 | 2.1:+14077328 | MS.gene35718:CDS |
| CTTATGACTTACCATATGGT+TGG | 0.539563 | 2.1:-14078597 | None:intergenic |
| AACTACTGGAAACAGCATGC+TGG | 0.545401 | 2.1:+14078810 | MS.gene35718:CDS |
| TATTATCCCTGAGTATCAAA+CGG | 0.570877 | 2.1:+14077289 | MS.gene35718:CDS |
| TCTCTTCCGTTTGATACTCA+GGG | 0.578898 | 2.1:-14077295 | None:intergenic |
| GGCTCCGAATGACGAAGCAA+TGG | 0.595356 | 2.1:+14077205 | MS.gene35718:CDS |
| AAACCTAACGTCGTTAGCGA+CGG | 0.600354 | 2.1:+14077139 | MS.gene35718:CDS |
| TTAAACTGGAATATACATGA+AGG | 0.605792 | 2.1:-14078567 | None:intergenic |
| ATGAGTCGTTTAGTTTCGGA+GGG | 0.628933 | 2.1:+14077164 | MS.gene35718:CDS |
| ACGGAGGAGTTAAGTGAACC+GGG | 0.650333 | 2.1:+14077239 | MS.gene35718:CDS |
| AAGTGAACCGGGTTCACCGG+AGG | 0.679744 | 2.1:+14077250 | MS.gene35718:CDS |
| AATGGCGAAGTTAACGACGG+AGG | 0.730607 | 2.1:+14077223 | MS.gene35718:CDS |
| AGCAATGGCGAAGTTAACGA+CGG | 0.732441 | 2.1:+14077220 | MS.gene35718:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGAATTATATGAAATC+AGG | + | chr2.1:14078113-14078132 | MS.gene35718:intron | 15.0% |
| !! | AAATGAATTATATGAAATCA+GGG | + | chr2.1:14078114-14078133 | MS.gene35718:intron | 15.0% |
| !! | ATCTTTAATATCTTTAACTA+TGG | + | chr2.1:14077676-14077695 | MS.gene35718:intron | 15.0% |
| !!! | ATAAAATTTTACATCATAGA+AGG | + | chr2.1:14078503-14078522 | MS.gene35718:intron | 15.0% |
| !! | AAATTACATAATACTTGGAT+CGG | - | chr2.1:14078279-14078298 | None:intergenic | 20.0% |
| !! | ACATTCTCATGATTATAATA+AGG | - | chr2.1:14078230-14078249 | None:intergenic | 20.0% |
| !! | ATCCAAGTATTATGTAATTT+AGG | + | chr2.1:14078279-14078298 | MS.gene35718:intron | 20.0% |
| !! | ATTTCTAATACAAATAGGAA+AGG | - | chr2.1:14078364-14078383 | None:intergenic | 20.0% |
| !! | TAAAGATCAAAATTATGCAT+TGG | - | chr2.1:14077663-14077682 | None:intergenic | 20.0% |
| !! | TGTACATTTCTAATACAAAT+AGG | - | chr2.1:14078369-14078388 | None:intergenic | 20.0% |
| ! | ACTGCAAGTATTTATAAACT+AGG | + | chr2.1:14077722-14077741 | MS.gene35718:intron | 25.0% |
| ! | AGCCTAAATTACATAATACT+TGG | - | chr2.1:14078284-14078303 | None:intergenic | 25.0% |
| ! | ATAAAGTAGTGTCTTCAATT+GGG | + | chr2.1:14078042-14078061 | MS.gene35718:intron | 25.0% |
| ! | ATAATCATGAGAATGTGAAT+TGG | + | chr2.1:14078234-14078253 | MS.gene35718:intron | 25.0% |
| ! | GTTGAAGAGATTTAATAGTT+AGG | - | chr2.1:14078653-14078672 | None:intergenic | 25.0% |
| ! | TAAATCTCTTCAACTAGAAT+TGG | + | chr2.1:14078659-14078678 | MS.gene35718:intron | 25.0% |
| ! | TAGTTAATAGTTACTACTGA+TGG | + | chr2.1:14078309-14078328 | MS.gene35718:intron | 25.0% |
| ! | TATAAAGTAGTGTCTTCAAT+TGG | + | chr2.1:14078041-14078060 | MS.gene35718:intron | 25.0% |
| ! | TTAAAAATAGACCAACCATA+TGG | + | chr2.1:14078586-14078605 | MS.gene35718:CDS | 25.0% |
| ! | TTAAACTGGAATATACATGA+AGG | - | chr2.1:14078570-14078589 | None:intergenic | 25.0% |
| !! | ATCAATTAGGTCATTCATTT+TGG | - | chr2.1:14077628-14077647 | None:intergenic | 25.0% |
| !! | CTCTTGTAATTTAAAACTGA+TGG | + | chr2.1:14078766-14078785 | MS.gene35718:intron | 25.0% |
| !! | TACATGTTGAACTTTAAGAA+CGG | + | chr2.1:14078385-14078404 | MS.gene35718:intron | 25.0% |
| !!! | AGAATAGTTTTGTGGTTTTA+TGG | + | chr2.1:14077978-14077997 | MS.gene35718:intron | 25.0% |
| !!! | TTTAATGTTTCTCTAAGGTT+TGG | + | chr2.1:14078725-14078744 | MS.gene35718:intron | 25.0% |
| AAAACAAACAAACCAGAACA+AGG | - | chr2.1:14077927-14077946 | None:intergenic | 30.0% | |
| AGAGTATGTATAATGCTGTT+AGG | + | chr2.1:14077315-14077334 | MS.gene35718:CDS | 30.0% | |
| ATAATGCTGTTAGGAGATTT+GGG | + | chr2.1:14077324-14077343 | MS.gene35718:CDS | 30.0% | |
| CTACAACTTCAAATTGTGAA+TGG | + | chr2.1:14078002-14078021 | MS.gene35718:intron | 30.0% | |
| GGTTGTTTAATGTTTCTCTA+AGG | + | chr2.1:14078720-14078739 | MS.gene35718:intron | 30.0% | |
| GTCATAAGTGTGAAATGTAA+TGG | + | chr2.1:14078612-14078631 | MS.gene35718:intron | 30.0% | |
| GTTTGATCCGGATATTTATA+CGG | + | chr2.1:14077445-14077464 | MS.gene35718:intron | 30.0% | |
| TATAATGCTGTTAGGAGATT+TGG | + | chr2.1:14077323-14077342 | MS.gene35718:CDS | 30.0% | |
| TATTATCCCTGAGTATCAAA+CGG | + | chr2.1:14077289-14077308 | MS.gene35718:CDS | 30.0% | |
| TTAAATTTGGAGATGGTGAT+GGG | + | chr2.1:14077411-14077430 | MS.gene35718:intron | 30.0% | |
| TTTGATACTCAGGGATAATA+TGG | - | chr2.1:14077289-14077308 | None:intergenic | 30.0% | |
| ! | CATTCACAATTTGAAGTTGT+AGG | - | chr2.1:14078004-14078023 | None:intergenic | 30.0% |
| ! | GCAAAAAAAGATCGACATTT+TGG | + | chr2.1:14078478-14078497 | MS.gene35718:intron | 30.0% |
| ! | TTCTTTTGTTCCTTTAGACT+AGG | + | chr2.1:14077817-14077836 | MS.gene35718:intron | 30.0% |
| !! | AAGTTGTTGACTTGATGAAT+AGG | + | chr2.1:14078198-14078217 | MS.gene35718:intron | 30.0% |
| !! | AGTTGTTGACTTGATGAATA+GGG | + | chr2.1:14078199-14078218 | MS.gene35718:intron | 30.0% |
| !! | GAAACTTGAGAATAGTTTTG+TGG | + | chr2.1:14077970-14077989 | MS.gene35718:intron | 30.0% |
| !!! | CAGTTTTGTTTTATGAGTGA+TGG | + | chr2.1:14077887-14077906 | MS.gene35718:intron | 30.0% |
| !!! | TCTGGTTTGTTTGTTTTAGT+AGG | + | chr2.1:14077930-14077949 | MS.gene35718:intron | 30.0% |
| !!! | TGGTTGGTCTATTTTTAAAC+TGG | - | chr2.1:14078584-14078603 | None:intergenic | 30.0% |
| ATCCGGATATTTATACGGAT+GGG | + | chr2.1:14077450-14077469 | MS.gene35718:intron | 35.0% | |
| ATGGAATGAATGTTTCTTGC+AGG | + | chr2.1:14078785-14078804 | MS.gene35718:intron | 35.0% | |
| ATTTCTGTTCAAGGGATTGA+TGG | + | chr2.1:14077476-14077495 | MS.gene35718:intron | 35.0% | |
| CACACTTATGACTTACCATA+TGG | - | chr2.1:14078604-14078623 | None:intergenic | 35.0% | |
| CTTATGACTTACCATATGGT+TGG | - | chr2.1:14078600-14078619 | None:intergenic | 35.0% | |
| GAATGTGAATTGGAATTGCT+TGG | + | chr2.1:14078244-14078263 | MS.gene35718:intron | 35.0% | |
| GTTAAACCCATTTCGATGAT+GGG | + | chr2.1:14077545-14077564 | MS.gene35718:intron | 35.0% | |
| GTTAAATTTGGAGATGGTGA+TGG | + | chr2.1:14077410-14077429 | MS.gene35718:intron | 35.0% | |
| TGGAATGAATGTTTCTTGCA+GGG | + | chr2.1:14078786-14078805 | MS.gene35718:intron | 35.0% | |
| TGGTAATACATTATCTCCTC+CGG | - | chr2.1:14077269-14077288 | None:intergenic | 35.0% | |
| TGTATTGTGACTGACAGTAA+TGG | + | chr2.1:14078699-14078718 | MS.gene35718:intron | 35.0% | |
| TTAAGAACGGTGAAATGGAA+TGG | + | chr2.1:14078398-14078417 | MS.gene35718:intron | 35.0% | |
| TTATGAGTGATGGTATTGTG+TGG | + | chr2.1:14077897-14077916 | MS.gene35718:intron | 35.0% | |
| TTTCTGTTCAAGGGATTGAT+GGG | + | chr2.1:14077477-14077496 | MS.gene35718:intron | 35.0% | |
| ! | AGGTTAGTTATGAGACTTTG+AGG | + | chr2.1:14077348-14077367 | MS.gene35718:intron | 35.0% |
| ! | CTACACTAAGAGTACATCAA+AGG | - | chr2.1:14078457-14078476 | None:intergenic | 35.0% |
| ! | GAACTTTAAGAACGGTGAAA+TGG | + | chr2.1:14078393-14078412 | MS.gene35718:intron | 35.0% |
| !! | GACTTTGAGGTTGAAGTATA+AGG | + | chr2.1:14077361-14077380 | MS.gene35718:intron | 35.0% |
| !! | TTCGGAGGGTTATGTTTTAA+CGG | + | chr2.1:14077178-14077197 | MS.gene35718:CDS | 35.0% |
| !!! | GGGTTATGTTTTAACGGTTT+TGG | + | chr2.1:14077184-14077203 | MS.gene35718:CDS | 35.0% |
| ATGACCTAATTGATTGTCGC+AGG | + | chr2.1:14077634-14077653 | MS.gene35718:intron | 40.0% | |
| ATGGGAGGATTTCTGTTCAA+GGG | + | chr2.1:14077468-14077487 | MS.gene35718:intron | 40.0% | |
| CTCCCATCCGTATAAATATC+CGG | - | chr2.1:14077455-14077474 | None:intergenic | 40.0% | |
| GAAACCTGCGACAATCAATT+AGG | - | chr2.1:14077641-14077660 | None:intergenic | 40.0% | |
| GAGGTTGAAGTATAAGGTTG+TGG | + | chr2.1:14077367-14077386 | MS.gene35718:intron | 40.0% | |
| GATCCGGATATTTATACGGA+TGG | + | chr2.1:14077449-14077468 | MS.gene35718:intron | 40.0% | |
| GGTTAAACCCATTTCGATGA+TGG | + | chr2.1:14077544-14077563 | MS.gene35718:intron | 40.0% | |
| GTCGGGTTATTTGTTTGATC+CGG | + | chr2.1:14077433-14077452 | MS.gene35718:intron | 40.0% | |
| TCTCTTCCGTTTGATACTCA+GGG | - | chr2.1:14077298-14077317 | None:intergenic | 40.0% | |
| TTCTGTTCAAGGGATTGATG+GGG | + | chr2.1:14077478-14077497 | MS.gene35718:intron | 40.0% | |
| TTGTTCCTTTAGACTAGGAG+AGG | + | chr2.1:14077822-14077841 | MS.gene35718:intron | 40.0% | |
| ! | ATGAGTCGTTTAGTTTCGGA+GGG | + | chr2.1:14077164-14077183 | MS.gene35718:CDS | 40.0% |
| ! | ATGATAGTGATGTGTTTGGC+TGG | + | chr2.1:14077847-14077866 | MS.gene35718:intron | 40.0% |
| ! | GGAGATGAGTCGTTTAGTTT+CGG | + | chr2.1:14077160-14077179 | MS.gene35718:CDS | 40.0% |
| ! | GGAGATGATAGTGATGTGTT+TGG | + | chr2.1:14077843-14077862 | MS.gene35718:intron | 40.0% |
| AAACCTAACGTCGTTAGCGA+CGG | + | chr2.1:14077139-14077158 | MS.gene35718:CDS | 45.0% | |
| AACTACTGGAAACAGCATGC+TGG | + | chr2.1:14078810-14078829 | MS.gene35718:CDS | 45.0% | |
| ACAACCTCTTTCTCCTTCAC+AGG | - | chr2.1:14077512-14077531 | None:intergenic | 45.0% | |
| AGCAATGGCGAAGTTAACGA+CGG | + | chr2.1:14077220-14077239 | MS.gene35718:CDS | 45.0% | |
| AGTGTCTTCAATTGGGCGTT+TGG | + | chr2.1:14078049-14078068 | MS.gene35718:intron | 45.0% | |
| CATCTCCTCTCCTAGTCTAA+AGG | - | chr2.1:14077830-14077849 | None:intergenic | 45.0% | |
| CGGATATTTATACGGATGGG+AGG | + | chr2.1:14077453-14077472 | MS.gene35718:intron | 45.0% | |
| CTCTCTTCCGTTTGATACTC+AGG | - | chr2.1:14077299-14077318 | None:intergenic | 45.0% | |
| GAAGTATAAGGTTGTGGCTC+AGG | + | chr2.1:14077373-14077392 | MS.gene35718:intron | 45.0% | |
| GAGTACATCAAAGGCAGTTC+AGG | - | chr2.1:14078448-14078467 | None:intergenic | 45.0% | |
| GATGGGAGGATTTCTGTTCA+AGG | + | chr2.1:14077467-14077486 | MS.gene35718:intron | 45.0% | |
| GGGTCGGTTAAATTTGGAGA+TGG | + | chr2.1:14077404-14077423 | MS.gene35718:intron | 45.0% | |
| GGTTGACCCATCATCGAAAT+GGG | - | chr2.1:14077554-14077573 | None:intergenic | 45.0% | |
| GTTTCCTGTGAAGGAGAAAG+AGG | + | chr2.1:14077505-14077524 | MS.gene35718:intron | 45.0% | |
| GTTTCTTGCAGGGAAACTAC+TGG | + | chr2.1:14078796-14078815 | MS.gene35718:intron | 45.0% | |
| TGCTGTTAGGAGATTTGGGA+AGG | + | chr2.1:14077328-14077347 | MS.gene35718:CDS | 45.0% | |
| TTCGCCATTGCTTCGTCATT+CGG | - | chr2.1:14077212-14077231 | None:intergenic | 45.0% | |
| ! | GATGAGTCGTTTAGTTTCGG+AGG | + | chr2.1:14077163-14077182 | MS.gene35718:CDS | 45.0% |
| ! | GCTGATGGGTCGGTTAAATT+TGG | + | chr2.1:14077398-14077417 | MS.gene35718:intron | 45.0% |
| !! | ATTTGGAGATGGTGATGGGT+CGG | + | chr2.1:14077415-14077434 | MS.gene35718:intron | 45.0% |
| !!! | GGTCATTCATTTTGGAACCG+AGG | - | chr2.1:14077620-14077639 | None:intergenic | 45.0% |
| !!! | TGGGGTTTTGTTTCCTGTGA+AGG | + | chr2.1:14077496-14077515 | MS.gene35718:intron | 45.0% |
| AATGGCGAAGTTAACGACGG+AGG | + | chr2.1:14077223-14077242 | MS.gene35718:CDS | 50.0% | |
| ACGGAGGAGTTAAGTGAACC+GGG | + | chr2.1:14077239-14077258 | MS.gene35718:CDS | 50.0% | |
| ATGTTCAACGACGCCTTTCC+TGG | - | chr2.1:14077576-14077595 | None:intergenic | 50.0% | |
| ATTATCTCCTCCGGTGAACC+CGG | - | chr2.1:14077260-14077279 | None:intergenic | 50.0% | |
| GAAACAGCATGCTGGATGCT+TGG | + | chr2.1:14078818-14078837 | MS.gene35718:CDS | 50.0% | |
| GAAGGAGAAAGAGGTTGTGC+CGG | + | chr2.1:14077514-14077533 | MS.gene35718:intron | 50.0% | |
| GACGGAGGAGTTAAGTGAAC+CGG | + | chr2.1:14077238-14077257 | MS.gene35718:CDS | 50.0% | |
| GAGGTGCGTTACTACTTCCT+CGG | + | chr2.1:14077600-14077619 | MS.gene35718:intron | 50.0% | |
| GGCGTCGTTGAACATAGAAG+AGG | + | chr2.1:14077581-14077600 | MS.gene35718:intron | 50.0% | |
| GGGTTGACCCATCATCGAAA+TGG | - | chr2.1:14077555-14077574 | None:intergenic | 50.0% | |
| GTTAAGTGAACCGGGTTCAC+CGG | + | chr2.1:14077247-14077266 | MS.gene35718:CDS | 50.0% | |
| TGTTCAACGACGCCTTTCCT+GGG | - | chr2.1:14077575-14077594 | None:intergenic | 50.0% | |
| TTGTGGCTCAGGAAGCTGAT+GGG | + | chr2.1:14077384-14077403 | MS.gene35718:intron | 50.0% | |
| TTGTGTGGCAGACCTTGTTC+TGG | + | chr2.1:14077912-14077931 | MS.gene35718:intron | 50.0% | |
| !! | ATGATGGGTCAACCCAGGAA+AGG | + | chr2.1:14077560-14077579 | MS.gene35718:intron | 50.0% |
| !! | TTTCGATGATGGGTCAACCC+AGG | + | chr2.1:14077555-14077574 | MS.gene35718:intron | 50.0% |
| !! | TTTGGAGATGGTGATGGGTC+GGG | + | chr2.1:14077416-14077435 | MS.gene35718:intron | 50.0% |
| ATGGGTTTAACCCGCTCCAC+CGG | - | chr2.1:14077536-14077555 | None:intergenic | 55.0% | |
| GGCTCCGAATGACGAAGCAA+TGG | + | chr2.1:14077205-14077224 | MS.gene35718:CDS | 55.0% | |
| GTTGTGGCTCAGGAAGCTGA+TGG | + | chr2.1:14077383-14077402 | MS.gene35718:intron | 55.0% | |
| TCTCCGTCGCTAACGACGTT+AGG | - | chr2.1:14077145-14077164 | None:intergenic | 55.0% | |
| AAGTGAACCGGGTTCACCGG+AGG | + | chr2.1:14077250-14077269 | MS.gene35718:CDS | 60.0% | |
| GGAGAAAGAGGTTGTGCCGG+TGG | + | chr2.1:14077517-14077536 | MS.gene35718:intron | 60.0% | |
| ! | AAGAGGTTGTGCCGGTGGAG+CGG | + | chr2.1:14077522-14077541 | MS.gene35718:intron | 60.0% |
| ! | GGCTCAGGAAGCTGATGGGT+CGG | + | chr2.1:14077388-14077407 | MS.gene35718:intron | 60.0% |
| ! | AGAGGTTGTGCCGGTGGAGC+GGG | + | chr2.1:14077523-14077542 | MS.gene35718:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 14077122 | 14078849 | 14077122 | ID=MS.gene35718 |
| chr2.1 | mRNA | 14077122 | 14078849 | 14077122 | ID=MS.gene35718.t1;Parent=MS.gene35718 |
| chr2.1 | exon | 14077122 | 14077349 | 14077122 | ID=MS.gene35718.t1.exon1;Parent=MS.gene35718.t1 |
| chr2.1 | CDS | 14077122 | 14077349 | 14077122 | ID=cds.MS.gene35718.t1;Parent=MS.gene35718.t1 |
| chr2.1 | exon | 14078522 | 14078607 | 14078522 | ID=MS.gene35718.t1.exon2;Parent=MS.gene35718.t1 |
| chr2.1 | CDS | 14078522 | 14078607 | 14078522 | ID=cds.MS.gene35718.t1;Parent=MS.gene35718.t1 |
| chr2.1 | exon | 14078807 | 14078849 | 14078807 | ID=MS.gene35718.t1.exon3;Parent=MS.gene35718.t1 |
| chr2.1 | CDS | 14078807 | 14078849 | 14078807 | ID=cds.MS.gene35718.t1;Parent=MS.gene35718.t1 |
| Gene Sequence |
| Protein sequence |
