AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059297

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059297.t1 MTR_2g087810 93.665 442 23 2 1 441 1 438 0.0 761
MS.gene059297.t1 MTR_4g050170 73.397 421 103 4 26 439 39 457 0.0 566
MS.gene059297.t1 MTR_7g106760 68.471 425 113 8 26 439 29 443 0.0 517
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059297.t1 AT5G06390 65.101 447 128 6 9 439 14 448 0.0 530
MS.gene059297.t1 AT2G35860 68.510 416 117 5 28 438 33 439 0.0 528
MS.gene059297.t1 AT3G52370 66.589 431 124 7 14 438 67 483 0.0 516
MS.gene059297.t1 AT3G11700 65.702 449 132 7 5 439 13 453 0.0 516
MS.gene059297.t1 AT3G52370 66.589 431 124 7 14 438 14 430 0.0 514
MS.gene059297.t1 AT5G05650 57.831 83 35 0 313 395 5 87 1.16e-28 110

Find 155 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAATGCTGTTAGGAGATT+TGG 0.205388 2.2:+11378155 MS.gene059297:CDS
GCTGATGGGTCGGTTAAATT+TGG 0.208882 2.2:+11378230 MS.gene059297:CDS
GAGATAATGGCCAGCTACTA+TGG 0.248971 2.2:+11380056 MS.gene059297:CDS
GACTTTGAGGTTGAAGTATA+AGG 0.267978 2.2:+11378193 MS.gene059297:CDS
TCAGCCTCTGGTGCTCCTTC+TGG 0.272483 2.2:-11377720 None:intergenic
AGAAGAAAGTGTTTGAAATC+TGG 0.287870 2.2:-11377408 None:intergenic
GTTTGATCCGGATATTTATA+CGG 0.296213 2.2:+11378277 MS.gene059297:CDS
GGATGGGAGGATTTCTGTTC+AGG 0.319410 2.2:+11378298 MS.gene059297:CDS
TTTGATACTCAGGGATAATA+TGG 0.322083 2.2:-11378118 None:intergenic
TTTGAGTTTATTTGAGTTGT+TGG 0.322343 2.2:-11377231 None:intergenic
CGTTCTAGAGCTACGTTGTT+TGG 0.331924 2.2:-11377375 None:intergenic
GGGTTGACCCGGAATGAATT+CGG 0.339469 2.2:-11377488 None:intergenic
CGTGGGAAAGAAGGAGGGTT+TGG 0.342553 2.2:-11377455 None:intergenic
ATTTCTGTTCAGGGGATTGA+TGG 0.345463 2.2:+11378308 MS.gene059297:CDS
CCGGCACCGGCGCCGGGACC+AGG 0.351903 2.2:+11377849 MS.gene059297:CDS
TTCCAACCCGAATTCATTCC+GGG 0.355360 2.2:+11377481 MS.gene059297:CDS
GAAGATCTCGCTGGAGATAA+TGG 0.357369 2.2:+11380043 MS.gene059297:CDS
CGGTGGTGATATTTGTTTCA+AGG 0.364185 2.2:-11377542 None:intergenic
ATAATGCTGTTAGGAGATTT+GGG 0.367717 2.2:+11378156 MS.gene059297:CDS
GGTGCTAAAGCTTCGTAAAT+CGG 0.370512 2.2:-11377810 None:intergenic
GTGAGTCGAGTAGTGCTATT+AGG 0.374489 2.2:-11377260 None:intergenic
ATCAAAACATTACTGCATTA+CGG 0.380273 2.2:+11377918 MS.gene059297:CDS
TCTCCGTCGCTAACGACGTT+AGG 0.380724 2.2:-11377974 None:intergenic
TTGGAGGGAAAGAATGTTAC+CGG 0.383221 2.2:-11377436 None:intergenic
GAAGAAAGTGTTTGAAATCT+GGG 0.387432 2.2:-11377407 None:intergenic
CTCTCTTCCGTTTGATACTC+AGG 0.391445 2.2:-11378128 None:intergenic
CCTGGTCCCGGCGCCGGTGC+CGG 0.396680 2.2:-11377849 None:intergenic
GGTTGACCCGGAATGAATTC+GGG 0.397998 2.2:-11377487 None:intergenic
TCGGGTCGGGTTATATCATT+CGG 0.404455 2.2:-11377600 None:intergenic
GGGTTGACCCATCATCGAAA+TGG 0.404794 2.2:-11378384 None:intergenic
TTCGCCATTGCATCGTCATT+CGG 0.406700 2.2:-11378041 None:intergenic
TCGGGTGGGTTACCTTCTCT+TGG 0.410510 2.2:-11377581 None:intergenic
GGAGATGAGTCGTTTAGTTT+CGG 0.417291 2.2:+11377992 MS.gene059297:CDS
GTCGGGTTATTTGTTTGATC+CGG 0.419309 2.2:+11378265 MS.gene059297:CDS
TTTGGAGATGGTGATGGGTC+GGG 0.422793 2.2:+11378248 MS.gene059297:CDS
TTTCTGTTCAGGGGATTGAT+GGG 0.425860 2.2:+11378309 MS.gene059297:CDS
GAAGTATAAGGTTGTGGCTC+AGG 0.427357 2.2:+11378205 MS.gene059297:CDS
AGAGTATGTATAATGCTGTT+AGG 0.440029 2.2:+11378147 MS.gene059297:CDS
GGTCGGAGATGGATTTGAAA+AGG 0.440788 2.2:-11377509 None:intergenic
GTTTCTTGCAGGGAAACTAC+TGG 0.441861 2.2:+11379697 MS.gene059297:intron
ATTCCAACCCGAATTCATTC+CGG 0.442125 2.2:+11377480 MS.gene059297:CDS
GGTTAAACCCATTTCGATGA+TGG 0.444022 2.2:+11378376 MS.gene059297:CDS
ACTAGCTCCGGCACCGGCGC+CGG 0.447734 2.2:+11377842 MS.gene059297:CDS
CTCCCATCCGTATAAATATC+CGG 0.451181 2.2:-11378284 None:intergenic
CTAGCTCCGGCACCGGCGCC+GGG 0.452261 2.2:+11377843 MS.gene059297:CDS
TGAAGATGTGCCGGTGGAGC+GGG 0.452605 2.2:+11378355 MS.gene059297:CDS
AAGTGATGGTGTGGTCCTCC+TGG 0.454718 2.2:-11377867 None:intergenic
GATGCAGATTCACGGATTGA+TGG 0.458907 2.2:+11379989 MS.gene059297:intron
AGGTTAGTTATGAGACTTTG+AGG 0.459291 2.2:+11378180 MS.gene059297:CDS
GGTTGACCCATCATCGAAAT+GGG 0.460260 2.2:-11378383 None:intergenic
GAAACAGCATGCTGGATGCT+TGG 0.462414 2.2:+11379719 MS.gene059297:CDS
GACGGAGGAGTTAAGTGAAC+CGG 0.462493 2.2:+11378070 MS.gene059297:CDS
CATGCTTTGATGCAGATTCA+CGG 0.471288 2.2:+11379981 MS.gene059297:intron
ACATCTTCATTCTCCTTCAC+AGG 0.473698 2.2:-11378341 None:intergenic
CAACGGAGAGTTACAAGTAA+AGG 0.475501 2.2:+11377890 MS.gene059297:CDS
TTGGAATGACGTGGGAAAGA+AGG 0.479877 2.2:-11377464 None:intergenic
ATTTGGAGATGGTGATGGGT+CGG 0.483121 2.2:+11378247 MS.gene059297:CDS
GGTCCTCCTGGTCCCGGCGC+CGG 0.483483 2.2:-11377855 None:intergenic
CGGGTCGGGTTATATCATTC+GGG 0.484603 2.2:-11377599 None:intergenic
GTTAAATTTGGAGATGGTGA+TGG 0.487142 2.2:+11378242 MS.gene059297:CDS
GGAATCTCCGGTGGTGAACC+TGG 0.487901 2.2:-11377789 None:intergenic
GTCGGAGATGGATTTGAAAA+GGG 0.488003 2.2:-11377508 None:intergenic
ATGGATGACACCGTCGGGTC+GGG 0.489214 2.2:-11377613 None:intergenic
TTACGGTGGTTACAACGAAA+TGG 0.489351 2.2:+11377935 MS.gene059297:CDS
TTGGTTAACCGTGAATTCTC+CGG 0.490152 2.2:-11377562 None:intergenic
TTGTTTCAAGGTGGAGGTGA+TGG 0.490374 2.2:-11377530 None:intergenic
ACCGGGACCATCACTAGCTC+CGG 0.497113 2.2:+11377830 MS.gene059297:CDS
AAATCATCCACGACGGCGCG+TGG 0.503906 2.2:-11377657 None:intergenic
TGGTGTGGTCCTCCTGGTCC+CGG 0.504688 2.2:-11377861 None:intergenic
ATCCGGATATTTATACGGAT+GGG 0.511243 2.2:+11378282 MS.gene059297:CDS
GTTAAACCCATTTCGATGAT+GGG 0.513111 2.2:+11378377 MS.gene059297:CDS
TTAAATTTGGAGATGGTGAT+GGG 0.514625 2.2:+11378243 MS.gene059297:CDS
ATGAAGATGTGCCGGTGGAG+CGG 0.516961 2.2:+11378354 MS.gene059297:CDS
ATTATCTCCTCCGGTGAACC+CGG 0.518780 2.2:-11378089 None:intergenic
TGGTAATACATTATCTCCTC+CGG 0.519375 2.2:-11378098 None:intergenic
TTCTGTTCAGGGGATTGATG+GGG 0.520089 2.2:+11378310 MS.gene059297:CDS
GATCCGGATATTTATACGGA+TGG 0.520456 2.2:+11378281 MS.gene059297:CDS
GATGAGTCGTTTAGTTTCGG+AGG 0.520707 2.2:+11377995 MS.gene059297:CDS
GGGAAAGAAGGAGGGTTTGG+AGG 0.521931 2.2:-11377452 None:intergenic
GTTAAGTGAACCGGGTTCAC+CGG 0.522544 2.2:+11378079 MS.gene059297:CDS
TATCACCACCGGAGAATTCA+CGG 0.524522 2.2:+11377554 MS.gene059297:CDS
GAGGTTGAAGTATAAGGTTG+TGG 0.525041 2.2:+11378199 MS.gene059297:CDS
GAATGACGTGGGAAAGAAGG+AGG 0.525282 2.2:-11377461 None:intergenic
TGATATTTGTTTCAAGGTGG+AGG 0.525569 2.2:-11377536 None:intergenic
GTGGAGGTGATGGTCGGAGA+TGG 0.529825 2.2:-11377520 None:intergenic
GCTTCGTAAATCGGAATCTC+CGG 0.530135 2.2:-11377801 None:intergenic
TGCTGTTAGGAGATTTGGGA+AGG 0.538978 2.2:+11378160 MS.gene059297:CDS
AAAATCACACCCATAGTAGC+TGG 0.539525 2.2:-11380066 None:intergenic
ATGGGTTTAACCCGCTCCAC+CGG 0.539798 2.2:-11378365 None:intergenic
ATGATGGGTCAACCCAGAAA+AGG 0.544114 2.2:+11378392 MS.gene059297:CDS
AACTACTGGAAACAGCATGC+TGG 0.545401 2.2:+11379711 MS.gene059297:CDS
ACCATCACTAGCTCCGGCAC+CGG 0.548054 2.2:+11377836 MS.gene059297:CDS
GTCGGGTTATATCATTCGGG+TGG 0.548723 2.2:-11377596 None:intergenic
GCCGGTGCCGGAGCTAGTGA+TGG 0.548941 2.2:-11377837 None:intergenic
GAAGAAGAATGCAATAGATG+TGG 0.554302 2.2:-11377167 None:intergenic
GGATTTGAAAAGGGTTGACC+CGG 0.557331 2.2:-11377499 None:intergenic
GGAAAGAAGGAGGGTTTGGA+GGG 0.560562 2.2:-11377451 None:intergenic
AGTGTTTGAAATCTGGGTCA+AGG 0.561664 2.2:-11377401 None:intergenic
GCAATAGATGTGGTGAGCCA+TGG 0.563641 2.2:-11377157 None:intergenic
GGGAAAGAATGTTACCGGGT+TGG 0.564238 2.2:-11377431 None:intergenic
CGACCCGACGGTGTCATCCA+TGG 0.564330 2.2:+11377615 MS.gene059297:CDS
GTAACTCTCCGTTGAAGTGA+TGG 0.564664 2.2:-11377881 None:intergenic
CGGTGATAGAACGGAGACTA+CGG 0.567013 2.2:-11377689 None:intergenic
TATTATCCCTGAGTATCAAA+CGG 0.570877 2.2:+11378121 MS.gene059297:CDS
GCCGGAGCTAGTGATGGTCC+CGG 0.576197 2.2:-11377831 None:intergenic
GATGGGAGGATTTCTGTTCA+GGG 0.576222 2.2:+11378299 MS.gene059297:CDS
GACCCGGAATGAATTCGGGT+TGG 0.576584 2.2:-11377483 None:intergenic
TCTCTTCCGTTTGATACTCA+GGG 0.578898 2.2:-11378127 None:intergenic
AGATAATGGCCAGCTACTAT+GGG 0.586528 2.2:+11380057 MS.gene059297:CDS
TCTTATCCCACGCGCCGTCG+TGG 0.586904 2.2:+11377650 MS.gene059297:CDS
TTCAAGGTGGAGGTGATGGT+CGG 0.587520 2.2:-11377526 None:intergenic
AATGACGTGGGAAAGAAGGA+GGG 0.592437 2.2:-11377460 None:intergenic
GGCTCAGGAAGCTGATGGGT+CGG 0.592530 2.2:+11378220 MS.gene059297:CDS
ATCGAATATGAAGATCTCGC+TGG 0.595531 2.2:+11380034 MS.gene059297:CDS
GTTGTGGCTCAGGAAGCTGA+TGG 0.599967 2.2:+11378215 MS.gene059297:CDS
AAACCTAACGTCGTTAGCGA+CGG 0.600354 2.2:+11377971 MS.gene059297:CDS
ATACCATGGATGACACCGTC+GGG 0.600581 2.2:-11377618 None:intergenic
CATGGATGACACCGTCGGGT+CGG 0.608376 2.2:-11377614 None:intergenic
GATTTACGAAGCTTTAGCAC+CGG 0.610740 2.2:+11377812 MS.gene059297:CDS
TGGTGATATTTGTTTCAAGG+TGG 0.612009 2.2:-11377539 None:intergenic
CGGATATTTATACGGATGGG+AGG 0.612456 2.2:+11378285 MS.gene059297:CDS
GGCGCCGAATGACGATGCAA+TGG 0.612493 2.2:+11378037 MS.gene059297:CDS
GGGTCGGTTAAATTTGGAGA+TGG 0.613917 2.2:+11378236 MS.gene059297:CDS
TTGTGGCTCAGGAAGCTGAT+GGG 0.614094 2.2:+11378216 MS.gene059297:CDS
TGGAGGGAAAGAATGTTACC+GGG 0.615457 2.2:-11377435 None:intergenic
GCACCGGCGCCGGGACCAGG+AGG 0.618074 2.2:+11377852 MS.gene059297:CDS
TCGGGTTATATCATTCGGGT+GGG 0.618173 2.2:-11377595 None:intergenic
ATGGGAGGATTTCTGTTCAG+GGG 0.623015 2.2:+11378300 MS.gene059297:CDS
AATACCATGGATGACACCGT+CGG 0.625914 2.2:-11377619 None:intergenic
GTTAACCGTGAATTCTCCGG+TGG 0.626086 2.2:-11377559 None:intergenic
ATTTACGAAGCTTTAGCACC+GGG 0.626285 2.2:+11377813 MS.gene059297:CDS
ATGAGTCGTTTAGTTTCGGA+GGG 0.628933 2.2:+11377996 MS.gene059297:CDS
CTTGAAACAAATATCACCAC+CGG 0.630079 2.2:+11377543 MS.gene059297:CDS
GGACCACACCATCACTTCAA+CGG 0.630152 2.2:+11377873 MS.gene059297:CDS
GAAGGAGAATGAAGATGTGC+CGG 0.633274 2.2:+11378346 MS.gene059297:CDS
AAACACTTTCTTCTCCAACC+CGG 0.635314 2.2:+11377417 MS.gene059297:CDS
AATCATCCACGACGGCGCGT+GGG 0.643495 2.2:-11377656 None:intergenic
TCGTAAATCGGAATCTCCGG+TGG 0.643713 2.2:-11377798 None:intergenic
ACGGAGGAGTTAAGTGAACC+GGG 0.650333 2.2:+11378071 MS.gene059297:CDS
ATTCACGGTTAACCAAGAGA+AGG 0.652788 2.2:+11377569 MS.gene059297:CDS
AAAACCAGAAGGAGCACCAG+AGG 0.660317 2.2:+11377716 MS.gene059297:CDS
ATCACCGCCGTAAAACCAGA+AGG 0.660902 2.2:+11377705 MS.gene059297:CDS
AATGATATAACCCGACCCGA+CGG 0.660973 2.2:+11377603 MS.gene059297:CDS
GAATTCGGGTTGGAATGACG+TGG 0.662643 2.2:-11377473 None:intergenic
GGTGTCGTTGAACATAGAAG+AGG 0.665526 2.2:+11378413 MS.gene059297:CDS
AAGTGAACCGGGTTCACCGG+AGG 0.679744 2.2:+11378082 MS.gene059297:CDS
AATTCGGGTTGGAATGACGT+GGG 0.684805 2.2:-11377472 None:intergenic
GGAGAATGAAGATGTGCCGG+TGG 0.687525 2.2:+11378349 MS.gene059297:CDS
CGGTGGTTACAACGAAATGG+CGG 0.694396 2.2:+11377938 MS.gene059297:CDS
TCTCCGTTGAAGTGATGGTG+TGG 0.694919 2.2:-11377876 None:intergenic
AAAACATTACTGCATTACGG+TGG 0.701943 2.2:+11377921 MS.gene059297:CDS
GTTGTTGAAATCATCCACGA+CGG 0.710359 2.2:-11377664 None:intergenic
TGCAATGGCGAAGTTAACGA+CGG 0.713938 2.2:+11378052 MS.gene059297:CDS
TGATAGAACGGAGACTACGG+CGG 0.737973 2.2:-11377686 None:intergenic
AATGGCGAAGTTAACGACGG+AGG 0.746620 2.2:+11378055 MS.gene059297:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTATGATATTTAGT+AGG + chr2.2:11378773-11378792 MS.gene059297:intron 10.0%
!! ATATTCTCATGATTATAATA+AGG - chr2.2:11379137-11379156 None:intergenic 15.0%
!!! ATAAAATTTTACATCATAGA+AGG + chr2.2:11379402-11379421 MS.gene059297:intron 15.0%
!! AAATTACATAATACTTGGAT+TGG - chr2.2:11379186-11379205 None:intergenic 20.0%
!! ATAATCATGAGAATATGAAT+TGG + chr2.2:11379141-11379160 MS.gene059297:intron 20.0%
!! ATCCAAGTATTATGTAATTT+AGG + chr2.2:11379186-11379205 MS.gene059297:intron 20.0%
!! ATTTCTAATACAAATAGGAA+AGG - chr2.2:11379263-11379282 None:intergenic 20.0%
!! GAGTATAGTTAATTACAATT+AGG - chr2.2:11379912-11379931 None:intergenic 20.0%
!! TAAAGATCAAAATTATGCAT+TGG - chr2.2:11378495-11378514 None:intergenic 20.0%
!! TGTACATTTCTAATACAAAT+AGG - chr2.2:11379268-11379287 None:intergenic 20.0%
!! TTGTGTTTAGTTATAATAAC+AGG + chr2.2:11378873-11378892 MS.gene059297:intron 20.0%
! AAAACAAAAAAACCAGAACA+AGG - chr2.2:11378752-11378771 None:intergenic 25.0%
! AGCCTAAATTACATAATACT+TGG - chr2.2:11379191-11379210 None:intergenic 25.0%
! AGTTATAATAACAGGCATAA+AGG + chr2.2:11378881-11378900 MS.gene059297:intron 25.0%
! ATAAAGTAGTGTCTTCAATT+GGG + chr2.2:11378949-11378968 MS.gene059297:intron 25.0%
! ATCAAAACATTACTGCATTA+CGG + chr2.2:11377918-11377937 MS.gene059297:CDS 25.0%
! ATTAAAAAAATCTTCACCAC+CGG + chr2.2:11377761-11377780 MS.gene059297:CDS 25.0%
! GTTATAATAACAGGCATAAA+GGG + chr2.2:11378882-11378901 MS.gene059297:intron 25.0%
! TAGCTTAATTTCCTTCATTA+TGG + chr2.2:11379938-11379957 MS.gene059297:intron 25.0%
! TGAAGATGAAGAAGAAAAAA+TGG - chr2.2:11377208-11377227 None:intergenic 25.0%
! TTAAAAATAGACCAACCATA+TGG + chr2.2:11379487-11379506 MS.gene059297:intron 25.0%
! TTAAACTGGAATATACATGA+AGG - chr2.2:11379471-11379490 None:intergenic 25.0%
!! ATCAATTAGGTCATTCATTT+TGG - chr2.2:11378460-11378479 None:intergenic 25.0%
!! TAAGAATTTTCTGAATACCA+TGG - chr2.2:11377635-11377654 None:intergenic 25.0%
!! TACATGTTGAACTTTAAGAA+AGG + chr2.2:11379284-11379303 MS.gene059297:intron 25.0%
!! TCAATTAGGTCATTCATTTT+GGG - chr2.2:11378459-11378478 None:intergenic 25.0%
!!! AAAAATCCCACGTTATTTTA+TGG + chr2.2:11379781-11379800 MS.gene059297:intron 25.0%
!!! AGAATAGTTTTGTGGTTTTA+TGG + chr2.2:11378821-11378840 MS.gene059297:intron 25.0%
!!! TAGTTTTGTTTTATGAGTGA+TGG + chr2.2:11378712-11378731 MS.gene059297:intron 25.0%
!!! TTGTTCAATACCTTGTTTTA+AGG - chr2.2:11379818-11379837 None:intergenic 25.0%
!!! TTTAATGTTTCTCTAAGGTT+TGG + chr2.2:11379626-11379645 MS.gene059297:intron 25.0%
!!! TTTGAGTTTATTTGAGTTGT+TGG - chr2.2:11377234-11377253 None:intergenic 25.0%
ACTGCAAATAGTTGTAAACT+AGG + chr2.2:11378551-11378570 MS.gene059297:intron 30.0%
AGAGTATGTATAATGCTGTT+AGG + chr2.2:11378147-11378166 MS.gene059297:CDS 30.0%
ATAATGCTGTTAGGAGATTT+GGG + chr2.2:11378156-11378175 MS.gene059297:CDS 30.0%
ATGAAATGAATGTTTCTTGC+AGG + chr2.2:11379686-11379705 MS.gene059297:intron 30.0%
CATAAAGTAGTGTCTTCAAT+TGG + chr2.2:11378948-11378967 MS.gene059297:intron 30.0%
CTACAACTTCAAATTGTGAA+TGG + chr2.2:11378845-11378864 MS.gene059297:intron 30.0%
GAAGTTGTAATAGGCATTAA+GGG + chr2.2:11378908-11378927 MS.gene059297:intron 30.0%
GGTTGTTTAATGTTTCTCTA+AGG + chr2.2:11379621-11379640 MS.gene059297:intron 30.0%
GTCATAAGTGTGAAATGTAA+TGG + chr2.2:11379513-11379532 MS.gene059297:intron 30.0%
GTTGAAGAGATTCAATAGTT+AGG - chr2.2:11379554-11379573 None:intergenic 30.0%
GTTTGATCCGGATATTTATA+CGG + chr2.2:11378277-11378296 MS.gene059297:CDS 30.0%
TAGCAAAGTTCCTTAAAACA+AGG + chr2.2:11379805-11379824 MS.gene059297:intron 30.0%
TATAATGCTGTTAGGAGATT+TGG + chr2.2:11378155-11378174 MS.gene059297:CDS 30.0%
TATTATCCCTGAGTATCAAA+CGG + chr2.2:11378121-11378140 MS.gene059297:CDS 30.0%
TGAAATGAATGTTTCTTGCA+GGG + chr2.2:11379687-11379706 MS.gene059297:intron 30.0%
TGAAGTTGTAATAGGCATTA+AGG + chr2.2:11378907-11378926 MS.gene059297:intron 30.0%
TGAATCTCTTCAACTAGAAT+TGG + chr2.2:11379560-11379579 MS.gene059297:intron 30.0%
TTAAATTTGGAGATGGTGAT+GGG + chr2.2:11378243-11378262 MS.gene059297:CDS 30.0%
TTAAGAAAGGTGAAATGGAA+TGG + chr2.2:11379297-11379316 MS.gene059297:intron 30.0%
TTTGATACTCAGGGATAATA+TGG - chr2.2:11378121-11378140 None:intergenic 30.0%
! CATTCACAATTTGAAGTTGT+AGG - chr2.2:11378847-11378866 None:intergenic 30.0%
! GAACTTTAAGAAAGGTGAAA+TGG + chr2.2:11379292-11379311 MS.gene059297:intron 30.0%
! GAATCTAGAATGGTTACTAA+AGG - chr2.2:11379747-11379766 None:intergenic 30.0%
! GCAAAAAAAGATCGACATTT+TGG + chr2.2:11379377-11379396 MS.gene059297:intron 30.0%
! TAAGGGTATGGAGTTATAAT+AGG + chr2.2:11378925-11378944 MS.gene059297:intron 30.0%
! TTCTTTTGTTCCATAAGACT+AGG + chr2.2:11378641-11378660 MS.gene059297:intron 30.0%
!! AAGTTGTTGACTTGATGAAT+GGG + chr2.2:11379105-11379124 MS.gene059297:intron 30.0%
!! AGAAGAAAGTGTTTGAAATC+TGG - chr2.2:11377411-11377430 None:intergenic 30.0%
!! GAAACTTGAGAATAGTTTTG+TGG + chr2.2:11378813-11378832 MS.gene059297:intron 30.0%
!! GAAGAAAGTGTTTGAAATCT+GGG - chr2.2:11377410-11377429 None:intergenic 30.0%
!! TGTTTTCTAGTGTTTGTAAG+AGG - chr2.2:11377323-11377342 None:intergenic 30.0%
!!! TGGTTGGTCTATTTTTAAAC+TGG - chr2.2:11379485-11379504 None:intergenic 30.0%
AAAACATTACTGCATTACGG+TGG + chr2.2:11377921-11377940 MS.gene059297:CDS 35.0%
ACAACGAATTCGACAAAATC+GGG + chr2.2:11379020-11379039 MS.gene059297:intron 35.0%
ATACTGTCAGTCACAATACA+TGG - chr2.2:11379600-11379619 None:intergenic 35.0%
ATCCGGATATTTATACGGAT+GGG + chr2.2:11378282-11378301 MS.gene059297:CDS 35.0%
CACACTTATGACTTACCATA+TGG - chr2.2:11379505-11379524 None:intergenic 35.0%
CATGTAAATGGCCATAATGA+AGG - chr2.2:11379952-11379971 None:intergenic 35.0%
CTTATGACTTACCATATGGT+TGG - chr2.2:11379501-11379520 None:intergenic 35.0%
CTTGAAACAAATATCACCAC+CGG + chr2.2:11377543-11377562 MS.gene059297:CDS 35.0%
GAAGAAGAATGCAATAGATG+TGG - chr2.2:11377170-11377189 None:intergenic 35.0%
GACAACGAATTCGACAAAAT+CGG + chr2.2:11379019-11379038 MS.gene059297:intron 35.0%
GTTAAACCCATTTCGATGAT+GGG + chr2.2:11378377-11378396 MS.gene059297:CDS 35.0%
GTTAAATTTGGAGATGGTGA+TGG + chr2.2:11378242-11378261 MS.gene059297:CDS 35.0%
TGATATTTGTTTCAAGGTGG+AGG - chr2.2:11377539-11377558 None:intergenic 35.0%
TGCTAGCCATAAAATAACGT+GGG - chr2.2:11379790-11379809 None:intergenic 35.0%
TGGTAATACATTATCTCCTC+CGG - chr2.2:11378101-11378120 None:intergenic 35.0%
TGGTGATATTTGTTTCAAGG+TGG - chr2.2:11377542-11377561 None:intergenic 35.0%
TGTAATAGGCATTAAGGGTA+TGG + chr2.2:11378913-11378932 MS.gene059297:intron 35.0%
TGTATTGTGACTGACAGTAT+TGG + chr2.2:11379600-11379619 MS.gene059297:intron 35.0%
TTATGAGTGATGGTATTGTG+TGG + chr2.2:11378722-11378741 MS.gene059297:intron 35.0%
TTGCTAGCCATAAAATAACG+TGG - chr2.2:11379791-11379810 None:intergenic 35.0%
! AAAGGGCATGAAGTTGTAAT+AGG + chr2.2:11378899-11378918 MS.gene059297:intron 35.0%
! AGGTTAGTTATGAGACTTTG+AGG + chr2.2:11378180-11378199 MS.gene059297:CDS 35.0%
! CTACACTAAGAGTACATCAA+AGG - chr2.2:11379356-11379375 None:intergenic 35.0%
! GTAAACTAGGTTACCGTTTT+GGG + chr2.2:11378564-11378583 MS.gene059297:intron 35.0%
! TGGGATTTTTCATTGACAAG+AGG - chr2.2:11379771-11379790 None:intergenic 35.0%
! TGTAAACTAGGTTACCGTTT+TGG + chr2.2:11378563-11378582 MS.gene059297:intron 35.0%
!! AGTTGTTGACTTGATGAATG+GGG + chr2.2:11379106-11379125 MS.gene059297:intron 35.0%
!! GAAGTTGTTGACTTGATGAA+TGG + chr2.2:11379104-11379123 MS.gene059297:intron 35.0%
!! GACTTTGAGGTTGAAGTATA+AGG + chr2.2:11378193-11378212 MS.gene059297:CDS 35.0%
!! TTCGGAGGGTTATGTTTTAA+CGG + chr2.2:11378010-11378029 MS.gene059297:CDS 35.0%
!!! AGAGGTTTGCTTTTTCGATT+AGG - chr2.2:11377305-11377324 None:intergenic 35.0%
!!! GCAAGCTATCACTTTTTTTG+TGG + chr2.2:11379845-11379864 MS.gene059297:intron 35.0%
!!! GGGTTATGTTTTAACGGTTT+TGG + chr2.2:11378016-11378035 MS.gene059297:CDS 35.0%
!!! GTTTGCTTTTTCGATTAGGT+AGG - chr2.2:11377301-11377320 None:intergenic 35.0%
AAACACTTTCTTCTCCAACC+CGG + chr2.2:11377417-11377436 MS.gene059297:CDS 40.0%
ACATCTTCATTCTCCTTCAC+AGG - chr2.2:11378344-11378363 None:intergenic 40.0%
AGAAAGGTGAAATGGAATGG+AGG + chr2.2:11379300-11379319 MS.gene059297:intron 40.0%
ATCGAATATGAAGATCTCGC+TGG + chr2.2:11380034-11380053 MS.gene059297:CDS 40.0%
ATGACCTAATTGATTGTCGC+AGG + chr2.2:11378466-11378485 MS.gene059297:intron 40.0%
ATGTGCTAGCAGCATGTAAA+TGG - chr2.2:11379964-11379983 None:intergenic 40.0%
ATTCACGGTTAACCAAGAGA+AGG + chr2.2:11377569-11377588 MS.gene059297:CDS 40.0%
ATTCCAACCCGAATTCATTC+CGG + chr2.2:11377480-11377499 MS.gene059297:CDS 40.0%
ATTTCTGTTCAGGGGATTGA+TGG + chr2.2:11378308-11378327 MS.gene059297:CDS 40.0%
CAACGAATTCGACAAAATCG+GGG + chr2.2:11379021-11379040 MS.gene059297:intron 40.0%
CAACGGAGAGTTACAAGTAA+AGG + chr2.2:11377890-11377909 MS.gene059297:CDS 40.0%
CATGCTTTGATGCAGATTCA+CGG + chr2.2:11379981-11380000 MS.gene059297:intron 40.0%
CGGTGGTGATATTTGTTTCA+AGG - chr2.2:11377545-11377564 None:intergenic 40.0%
CTCCCATCCGTATAAATATC+CGG - chr2.2:11378287-11378306 None:intergenic 40.0%
GAAACCTGCGACAATCAATT+AGG - chr2.2:11378473-11378492 None:intergenic 40.0%
GACAAGAGGTGAATCTAGAA+TGG - chr2.2:11379757-11379776 None:intergenic 40.0%
GAGGTTGAAGTATAAGGTTG+TGG + chr2.2:11378199-11378218 MS.gene059297:CDS 40.0%
GATCCGGATATTTATACGGA+TGG + chr2.2:11378281-11378300 MS.gene059297:CDS 40.0%
GGTGCTAAAGCTTCGTAAAT+CGG - chr2.2:11377813-11377832 None:intergenic 40.0%
GGTTAAACCCATTTCGATGA+TGG + chr2.2:11378376-11378395 MS.gene059297:CDS 40.0%
GTCGGGTTATTTGTTTGATC+CGG + chr2.2:11378265-11378284 MS.gene059297:CDS 40.0%
GTTGTTGAAATCATCCACGA+CGG - chr2.2:11377667-11377686 None:intergenic 40.0%
TCTCTTCCGTTTGATACTCA+GGG - chr2.2:11378130-11378149 None:intergenic 40.0%
TTACGGTGGTTACAACGAAA+TGG + chr2.2:11377935-11377954 MS.gene059297:CDS 40.0%
TTGGAGGGAAAGAATGTTAC+CGG - chr2.2:11377439-11377458 None:intergenic 40.0%
TTGGTTAACCGTGAATTCTC+CGG - chr2.2:11377565-11377584 None:intergenic 40.0%
TTGTTCCATAAGACTAGGAG+AGG + chr2.2:11378646-11378665 MS.gene059297:intron 40.0%
TTTCTGTTCAGGGGATTGAT+GGG + chr2.2:11378309-11378328 MS.gene059297:CDS 40.0%
! AGATAATGGCCAGCTACTAT+GGG + chr2.2:11380057-11380076 MS.gene059297:CDS 40.0%
! AGTGTTTGAAATCTGGGTCA+AGG - chr2.2:11377404-11377423 None:intergenic 40.0%
! ATGAGTCGTTTAGTTTCGGA+GGG + chr2.2:11377996-11378015 MS.gene059297:CDS 40.0%
! ATGTTCAACGACACCTTTTC+TGG - chr2.2:11378408-11378427 None:intergenic 40.0%
! ATTTACGAAGCTTTAGCACC+GGG + chr2.2:11377813-11377832 MS.gene059297:CDS 40.0%
! GATTTACGAAGCTTTAGCAC+CGG + chr2.2:11377812-11377831 MS.gene059297:CDS 40.0%
! GGAGATGAGTCGTTTAGTTT+CGG + chr2.2:11377992-11378011 MS.gene059297:CDS 40.0%
! GTCGGAGATGGATTTGAAAA+GGG - chr2.2:11377511-11377530 None:intergenic 40.0%
! TGTTCAACGACACCTTTTCT+GGG - chr2.2:11378407-11378426 None:intergenic 40.0%
!! AATTTTCTAGTGTCAGCCTC+TGG - chr2.2:11377735-11377754 None:intergenic 40.0%
AAACCTAACGTCGTTAGCGA+CGG + chr2.2:11377971-11377990 MS.gene059297:CDS 45.0%
AACTACTGGAAACAGCATGC+TGG + chr2.2:11379711-11379730 MS.gene059297:CDS 45.0%
AAGTACTCCTCCACCCAAAA+CGG - chr2.2:11378580-11378599 None:intergenic 45.0%
AATACCATGGATGACACCGT+CGG - chr2.2:11377622-11377641 None:intergenic 45.0%
AATGACGTGGGAAAGAAGGA+GGG - chr2.2:11377463-11377482 None:intergenic 45.0%
AATGATATAACCCGACCCGA+CGG + chr2.2:11377603-11377622 MS.gene059297:CDS 45.0%
AGACTAGGAGAGGAGATGAT+AGG + chr2.2:11378656-11378675 MS.gene059297:intron 45.0%
AGTGTCTTCAATTGGGCGTT+TGG + chr2.2:11378956-11378975 MS.gene059297:intron 45.0%
ATGATAGGGATGTGTTTGGC+TGG + chr2.2:11378671-11378690 MS.gene059297:intron 45.0%
ATGGGAGGATTTCTGTTCAG+GGG + chr2.2:11378300-11378319 MS.gene059297:CDS 45.0%
CGGATATTTATACGGATGGG+AGG + chr2.2:11378285-11378304 MS.gene059297:CDS 45.0%
CTCTCTTCCGTTTGATACTC+AGG - chr2.2:11378131-11378150 None:intergenic 45.0%
GAAGATCTCGCTGGAGATAA+TGG + chr2.2:11380043-11380062 MS.gene059297:CDS 45.0%
GAAGGAGAATGAAGATGTGC+CGG + chr2.2:11378346-11378365 MS.gene059297:CDS 45.0%
GAAGTATAAGGTTGTGGCTC+AGG + chr2.2:11378205-11378224 MS.gene059297:CDS 45.0%
GACTAGGAGAGGAGATGATA+GGG + chr2.2:11378657-11378676 MS.gene059297:intron 45.0%
GAGTACATCAAAGGCAGTTC+AGG - chr2.2:11379347-11379366 None:intergenic 45.0%
GATGGGAGGATTTCTGTTCA+GGG + chr2.2:11378299-11378318 MS.gene059297:CDS 45.0%
GCTTCGTAAATCGGAATCTC+CGG - chr2.2:11377804-11377823 None:intergenic 45.0%
GGAGATGATAGGGATGTGTT+TGG + chr2.2:11378667-11378686 MS.gene059297:intron 45.0%
GGATTTGAAAAGGGTTGACC+CGG - chr2.2:11377502-11377521 None:intergenic 45.0%
GGGTCGGTTAAATTTGGAGA+TGG + chr2.2:11378236-11378255 MS.gene059297:CDS 45.0%
GGTTGACCCATCATCGAAAT+GGG - chr2.2:11378386-11378405 None:intergenic 45.0%
GTAACTCTCCGTTGAAGTGA+TGG - chr2.2:11377884-11377903 None:intergenic 45.0%
GTTTCTTGCAGGGAAACTAC+TGG + chr2.2:11379697-11379716 MS.gene059297:intron 45.0%
TATCACCACCGGAGAATTCA+CGG + chr2.2:11377554-11377573 MS.gene059297:CDS 45.0%
TCGGGTCGGGTTATATCATT+CGG - chr2.2:11377603-11377622 None:intergenic 45.0%
TCGGGTTATATCATTCGGGT+GGG - chr2.2:11377598-11377617 None:intergenic 45.0%
TGCAATGGCGAAGTTAACGA+CGG + chr2.2:11378052-11378071 MS.gene059297:CDS 45.0%
TGCTGTTAGGAGATTTGGGA+AGG + chr2.2:11378160-11378179 MS.gene059297:CDS 45.0%
TGGAGGGAAAGAATGTTACC+GGG - chr2.2:11377438-11377457 None:intergenic 45.0%
TTCCAACCCGAATTCATTCC+GGG + chr2.2:11377481-11377500 MS.gene059297:CDS 45.0%
TTCGCCATTGCATCGTCATT+CGG - chr2.2:11378044-11378063 None:intergenic 45.0%
TTCTGTTCAGGGGATTGATG+GGG + chr2.2:11378310-11378329 MS.gene059297:CDS 45.0%
TTGGAATGACGTGGGAAAGA+AGG - chr2.2:11377467-11377486 None:intergenic 45.0%
TTGTTTCAAGGTGGAGGTGA+TGG - chr2.2:11377533-11377552 None:intergenic 45.0%
! GAGATAATGGCCAGCTACTA+TGG + chr2.2:11380056-11380075 MS.gene059297:CDS 45.0%
! GATGAGTCGTTTAGTTTCGG+AGG + chr2.2:11377995-11378014 MS.gene059297:CDS 45.0%
! GATGCAGATTCACGGATTGA+TGG + chr2.2:11379989-11380008 MS.gene059297:intron 45.0%
! GCTGATGGGTCGGTTAAATT+TGG + chr2.2:11378230-11378249 MS.gene059297:CDS 45.0%
! GGTCGGAGATGGATTTGAAA+AGG - chr2.2:11377512-11377531 None:intergenic 45.0%
! GTGAGTCGAGTAGTGCTATT+AGG - chr2.2:11377263-11377282 None:intergenic 45.0%
! GTTTTACGGCGGTGATAGAA+CGG - chr2.2:11377701-11377720 None:intergenic 45.0%
!! AACTAGGTTACCGTTTTGGG+TGG + chr2.2:11378567-11378586 MS.gene059297:intron 45.0%
!! AATTCGGGTTGGAATGACGT+GGG - chr2.2:11377475-11377494 None:intergenic 45.0%
!! ATGATGGGTCAACCCAGAAA+AGG + chr2.2:11378392-11378411 MS.gene059297:CDS 45.0%
!! ATTTGGAGATGGTGATGGGT+CGG + chr2.2:11378247-11378266 MS.gene059297:CDS 45.0%
!! CATCTCCTCTCCTAGTCTTA+TGG - chr2.2:11378654-11378673 None:intergenic 45.0%
!! CGTTCTAGAGCTACGTTGTT+TGG - chr2.2:11377378-11377397 None:intergenic 45.0%
!! GGTGTCGTTGAACATAGAAG+AGG + chr2.2:11378413-11378432 MS.gene059297:CDS 45.0%
!!! TGGGGTTTTGTTTCCTGTGA+AGG + chr2.2:11378328-11378347 MS.gene059297:CDS 45.0%
!!! TGGTGCTCCTTCTGGTTTTA+CGG - chr2.2:11377715-11377734 None:intergenic 45.0%
AATGGCGAAGTTAACGACGG+AGG + chr2.2:11378055-11378074 MS.gene059297:CDS 50.0%
ACGGAGGAGTTAAGTGAACC+GGG + chr2.2:11378071-11378090 MS.gene059297:CDS 50.0%
ATACCATGGATGACACCGTC+GGG - chr2.2:11377621-11377640 None:intergenic 50.0%
ATCACCGCCGTAAAACCAGA+AGG + chr2.2:11377705-11377724 MS.gene059297:CDS 50.0%
ATTATCTCCTCCGGTGAACC+CGG - chr2.2:11378092-11378111 None:intergenic 50.0%
CGGGTCGGGTTATATCATTC+GGG - chr2.2:11377602-11377621 None:intergenic 50.0%
CGGTGATAGAACGGAGACTA+CGG - chr2.2:11377692-11377711 None:intergenic 50.0%
CGGTGGTTACAACGAAATGG+CGG + chr2.2:11377938-11377957 MS.gene059297:CDS 50.0%
GAAACAGCATGCTGGATGCT+TGG + chr2.2:11379719-11379738 MS.gene059297:CDS 50.0%
GAATGACGTGGGAAAGAAGG+AGG - chr2.2:11377464-11377483 None:intergenic 50.0%
GACGGAGGAGTTAAGTGAAC+CGG + chr2.2:11378070-11378089 MS.gene059297:CDS 50.0%
GAGGTGCGTTACTACTTCCT+CGG + chr2.2:11378432-11378451 MS.gene059297:intron 50.0%
GGAAAAACCAGGTTCACCAC+CGG + chr2.2:11377782-11377801 MS.gene059297:CDS 50.0%
GGAAAGAAGGAGGGTTTGGA+GGG - chr2.2:11377454-11377473 None:intergenic 50.0%
GGACCACACCATCACTTCAA+CGG + chr2.2:11377873-11377892 MS.gene059297:CDS 50.0%
GGATGGGAGGATTTCTGTTC+AGG + chr2.2:11378298-11378317 MS.gene059297:CDS 50.0%
GGGAAAGAATGTTACCGGGT+TGG - chr2.2:11377434-11377453 None:intergenic 50.0%
GGGTTGACCCATCATCGAAA+TGG - chr2.2:11378387-11378406 None:intergenic 50.0%
GGGTTGACCCGGAATGAATT+CGG - chr2.2:11377491-11377510 None:intergenic 50.0%
GGTTGACCCGGAATGAATTC+GGG - chr2.2:11377490-11377509 None:intergenic 50.0%
GTCGGGTTATATCATTCGGG+TGG - chr2.2:11377599-11377618 None:intergenic 50.0%
GTTAACCGTGAATTCTCCGG+TGG - chr2.2:11377562-11377581 None:intergenic 50.0%
GTTAAGTGAACCGGGTTCAC+CGG + chr2.2:11378079-11378098 MS.gene059297:CDS 50.0%
TCGTAAATCGGAATCTCCGG+TGG - chr2.2:11377801-11377820 None:intergenic 50.0%
TCTTCACCACCGGAAAAACC+AGG + chr2.2:11377771-11377790 MS.gene059297:CDS 50.0%
TGATAGAACGGAGACTACGG+CGG - chr2.2:11377689-11377708 None:intergenic 50.0%
TTGTGGCTCAGGAAGCTGAT+GGG + chr2.2:11378216-11378235 MS.gene059297:CDS 50.0%
TTGTGTGGCAGACCTTGTTC+TGG + chr2.2:11378737-11378756 MS.gene059297:intron 50.0%
! TCTCCGTTGAAGTGATGGTG+TGG - chr2.2:11377879-11377898 None:intergenic 50.0%
! TTCAAGGTGGAGGTGATGGT+CGG - chr2.2:11377529-11377548 None:intergenic 50.0%
!! AAAACCAGAAGGAGCACCAG+AGG + chr2.2:11377716-11377735 MS.gene059297:CDS 50.0%
!! GAATTCGGGTTGGAATGACG+TGG - chr2.2:11377476-11377495 None:intergenic 50.0%
!! GGTGGTGAACCTGGTTTTTC+CGG - chr2.2:11377783-11377802 None:intergenic 50.0%
!! TAGGTTACCGTTTTGGGTGG+AGG + chr2.2:11378570-11378589 MS.gene059297:intron 50.0%
!! TTTGGAGATGGTGATGGGTC+GGG + chr2.2:11378248-11378267 MS.gene059297:CDS 50.0%
!!! GGTCATTCATTTTGGGACCG+AGG - chr2.2:11378452-11378471 None:intergenic 50.0%
!!! TGCTCCTTCTGGTTTTACGG+CGG - chr2.2:11377712-11377731 None:intergenic 50.0%
ATGGGTTTAACCCGCTCCAC+CGG - chr2.2:11378368-11378387 None:intergenic 55.0%
CGTGGGAAAGAAGGAGGGTT+TGG - chr2.2:11377458-11377477 None:intergenic 55.0%
GACCCGGAATGAATTCGGGT+TGG - chr2.2:11377486-11377505 None:intergenic 55.0%
GGAGAATGAAGATGTGCCGG+TGG + chr2.2:11378349-11378368 MS.gene059297:CDS 55.0%
GGGAAAGAAGGAGGGTTTGG+AGG - chr2.2:11377455-11377474 None:intergenic 55.0%
GTTGTGGCTCAGGAAGCTGA+TGG + chr2.2:11378215-11378234 MS.gene059297:CDS 55.0%
TCTCCGTCGCTAACGACGTT+AGG - chr2.2:11377977-11377996 None:intergenic 55.0%
! AAGTGATGGTGTGGTCCTCC+TGG - chr2.2:11377870-11377889 None:intergenic 55.0%
! ATGAAGATGTGCCGGTGGAG+CGG + chr2.2:11378354-11378373 MS.gene059297:CDS 55.0%
!! GGTGAACCTGGTTTTTCCGG+TGG - chr2.2:11377780-11377799 None:intergenic 55.0%
!! TCGGGTGGGTTACCTTCTCT+TGG - chr2.2:11377584-11377603 None:intergenic 55.0%
AAATCATCCACGACGGCGCG+TGG - chr2.2:11377660-11377679 None:intergenic 60.0%
AAGTGAACCGGGTTCACCGG+AGG + chr2.2:11378082-11378101 MS.gene059297:CDS 60.0%
AATCATCCACGACGGCGCGT+GGG - chr2.2:11377659-11377678 None:intergenic 60.0%
ACCATCACTAGCTCCGGCAC+CGG + chr2.2:11377836-11377855 MS.gene059297:CDS 60.0%
ACCGGGACCATCACTAGCTC+CGG + chr2.2:11377830-11377849 MS.gene059297:CDS 60.0%
ATGGATGACACCGTCGGGTC+GGG - chr2.2:11377616-11377635 None:intergenic 60.0%
CATGGATGACACCGTCGGGT+CGG - chr2.2:11377617-11377636 None:intergenic 60.0%
GGAATCTCCGGTGGTGAACC+TGG - chr2.2:11377792-11377811 None:intergenic 60.0%
TCAGCCTCTGGTGCTCCTTC+TGG - chr2.2:11377723-11377742 None:intergenic 60.0%
! GGCGCCGAATGACGATGCAA+TGG + chr2.2:11378037-11378056 MS.gene059297:CDS 60.0%
! GGCTCAGGAAGCTGATGGGT+CGG + chr2.2:11378220-11378239 MS.gene059297:CDS 60.0%
! GTGGAGGTGATGGTCGGAGA+TGG - chr2.2:11377523-11377542 None:intergenic 60.0%
! TGAAGATGTGCCGGTGGAGC+GGG + chr2.2:11378355-11378374 MS.gene059297:CDS 60.0%
GCCGGAGCTAGTGATGGTCC+CGG - chr2.2:11377834-11377853 None:intergenic 65.0%
TCTTATCCCACGCGCCGTCG+TGG + chr2.2:11377650-11377669 MS.gene059297:CDS 65.0%
TGGTGTGGTCCTCCTGGTCC+CGG - chr2.2:11377864-11377883 None:intergenic 65.0%
!! CGACCCGACGGTGTCATCCA+TGG + chr2.2:11377615-11377634 MS.gene059297:CDS 65.0%
! GCCGGTGCCGGAGCTAGTGA+TGG - chr2.2:11377840-11377859 None:intergenic 70.0%
!! ACTAGCTCCGGCACCGGCGC+CGG + chr2.2:11377842-11377861 MS.gene059297:CDS 75.0%
! GGTCCTCCTGGTCCCGGCGC+CGG - chr2.2:11377858-11377877 None:intergenic 80.0%
!!! CTAGCTCCGGCACCGGCGCC+GGG + chr2.2:11377843-11377862 MS.gene059297:CDS 80.0%
!! GCACCGGCGCCGGGACCAGG+AGG + chr2.2:11377852-11377871 MS.gene059297:CDS 85.0%
!!! CCTGGTCCCGGCGCCGGTGC+CGG - chr2.2:11377852-11377871 None:intergenic 85.0%
!!! CCGGCACCGGCGCCGGGACC+AGG + chr2.2:11377849-11377868 MS.gene059297:CDS 90.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 11377159 11380084 11377159 ID=MS.gene059297
chr2.2 mRNA 11377159 11380084 11377159 ID=MS.gene059297.t1;Parent=MS.gene059297
chr2.2 exon 11377159 11378434 11377159 ID=MS.gene059297.t1.exon1;Parent=MS.gene059297.t1
chr2.2 CDS 11377159 11378434 11377159 ID=cds.MS.gene059297.t1;Parent=MS.gene059297.t1
chr2.2 exon 11379708 11379749 11379708 ID=MS.gene059297.t1.exon2;Parent=MS.gene059297.t1
chr2.2 CDS 11379708 11379749 11379708 ID=cds.MS.gene059297.t1;Parent=MS.gene059297.t1
chr2.2 exon 11379996 11380084 11379996 ID=MS.gene059297.t1.exon3;Parent=MS.gene059297.t1
chr2.2 CDS 11379996 11380084 11379996 ID=cds.MS.gene059297.t1;Parent=MS.gene059297.t1
Gene Sequence

>MS.gene059297

ATGGCTCACCACATCTATTGCATTCTTCTTCTTCTTTTCTCTCTATCCATTTTTTCTTCTTCATCTTCATCACCAACAACTCAAATAAACTCAAACTCAATCCTAATAGCACTACTCGACTCACATTACACTGAACTCACCTACCTAATCGAAAAAGCAAACCTCTTACAAACACTAGAAAACACTGTCTCAAAACACAACATCACTATCTTTGCACCAAACAACGTAGCTCTAGAACGTAACCTTGACCCAGATTTCAAACACTTTCTTCTCCAACCCGGTAACATTCTTTCCCTCCAAACCCTCCTTCTTTCCCACGTCATTCCAACCCGAATTCATTCCGGGTCAACCCTTTTCAAATCCATCTCCGACCATCACCTCCACCTTGAAACAAATATCACCACCGGAGAATTCACGGTTAACCAAGAGAAGGTAACCCACCCGAATGATATAACCCGACCCGACGGTGTCATCCATGGTATTCAGAAAATTCTTATCCCACGCGCCGTCGTGGATGATTTCAACAACCGCCGTAGTCTCCGTTCTATCACCGCCGTAAAACCAGAAGGAGCACCAGAGGCTGACACTAGAAAATTGAAAAAATTAAAAAAATCTTCACCACCGGAAAAACCAGGTTCACCACCGGAGATTCCGATTTACGAAGCTTTAGCACCGGGACCATCACTAGCTCCGGCACCGGCGCCGGGACCAGGAGGACCACACCATCACTTCAACGGAGAGTTACAAGTAAAGGATTTCATCAAAACATTACTGCATTACGGTGGTTACAACGAAATGGCGGATATACTCGTAAACCTAACGTCGTTAGCGACGGAGATGAGTCGTTTAGTTTCGGAGGGTTATGTTTTAACGGTTTTGGCGCCGAATGACGATGCAATGGCGAAGTTAACGACGGAGGAGTTAAGTGAACCGGGTTCACCGGAGGAGATAATGTATTACCATATTATCCCTGAGTATCAAACGGAAGAGAGTATGTATAATGCTGTTAGGAGATTTGGGAAGGTTAGTTATGAGACTTTGAGGTTGAAGTATAAGGTTGTGGCTCAGGAAGCTGATGGGTCGGTTAAATTTGGAGATGGTGATGGGTCGGGTTATTTGTTTGATCCGGATATTTATACGGATGGGAGGATTTCTGTTCAGGGGATTGATGGGGTTTTGTTTCCTGTGAAGGAGAATGAAGATGTGCCGGTGGAGCGGGTTAAACCCATTTCGATGATGGGTCAACCCAGAAAAGGTGTCGTTGAACATAGAAGAGGTGCGTTACTACTTCCTCGGTCCCAAAATGAATGACCTAATTGATTGTCGCAGGTTTCCAATGCATAATTTTGATCTTTAATATCTTTAATTATGTTCAAAATATGTTATGTGAATACTGCAAATAGTTGTAAACTAGGTTACCGTTTTGGGTGGAGGAGTACTTTTTTACTATGCTTCACTCTTTTTGTTTTTTATATAAACTTTTTCTTTTGTTCCATAAGACTAGGAGAGGAGATGATAGGGATGTGTTTGGCTGGATGCACTTTTTTTCTTTCTAGTTTTGTTTTATGAGTGATGGTATTGTGTGGCAGACCTTGTTCTGGTTTTTTTGTTTTCTTTATTTTATGATATTTAGTAGGACAAGCAAGTTGAAGCTGAAACTTGAGAATAGTTTTGTGGTTTTATGGCCTACAACTTCAAATTGTGAATGGATAAGTTGTGTTTAGTTATAATAACAGGCATAAAGGGCATGAAGTTGTAATAGGCATTAAGGGTATGGAGTTATAATAGGCATAAAGTAGTGTCTTCAATTGGGCGTTTGGAGCAAGTCATTATTTATCTGAGTTAATACATGTTTCGATTGACAACGAATTCGACAAAATCGGGGTGACACTGTGATTTTGTTGAAGTTGCTAAGTATAGCTTTTGATAAAATCATAGTGATTTTGAAGTTGTTGACTTGATGAATGGGGATTATCCTTATTATAATCATGAGAATATGAATTGGAATTGCTTGACATTAAGATCCAATCCAAGTATTATGTAATTTAGGCTGTTATTAGTTACTACTGATGCATAATATGTATCAGTTTTTGATTTTTAGCCTTTCCTATTTGTATTAGAAATGTACATGTTGAACTTTAAGAAAGGTGAAATGGAATGGAGGTAGTGAATACTATTAGAATTTCCTGAACTGCCTTTGATGTACTCTTAGTGTAGAGCAAAAAAAGATCGACATTTTGGTTATAAAATTTTACATCATAGAAGGTTCATATATTTCTGCTGAAAATTGTCAGTTATTGCTAATGCTACCTTCATGTATATTCCAGTTTAAAAATAGACCAACCATATGGTAAGTCATAAGTGTGAAATGTAATGGTACAAAATTAGCTTGCCTAACTATTGAATCTCTTCAACTAGAATTGGTCACATGCTCATTTCCATGTATTGTGACTGACAGTATTGGTTGTTTAATGTTTCTCTAAGGTTTGGCTATATTATTTTTAATGTCTGCTGTAATTTAAAACTGATGAAATGAATGTTTCTTGCAGGGAAACTACTGGAAACAGCATGCTGGATGCTTGGAACCTTTAGTAACCATTCTAGATTCACCTCTTGTCAATGAAAAATCCCACGTTATTTTATGGCTAGCAAAGTTCCTTAAAACAAGGTATTGAACAATTGACAAGCAAGCTATCACTTTTTTTGTGGCTTTGTGCATGAAAACTCATCTGTTTCTAGTTTACGATTTGCCTAATTGTAATTAACTATACTCAGTTTTTAGCTTAATTTCCTTCATTATGGCCATTTACATGCTGCTAGCACATGCTTTGATGCAGATTCACGGATTGATGGAAATCTCAATGATCTTAAAAATATCGAATATGAAGATCTCGCTGGAGATAATGGCCAGCTACTATGGGTGTGA
Protein sequence

>MS.gene059297.t1

MAHHIYCILLLLFSLSIFSSSSSSPTTQINSNSILIALLDSHYTELTYLIEKANLLQTLENTVSKHNITIFAPNNVALERNLDPDFKHFLLQPGNILSLQTLLLSHVIPTRIHSGSTLFKSISDHHLHLETNITTGEFTVNQEKVTHPNDITRPDGVIHGIQKILIPRAVVDDFNNRRSLRSITAVKPEGAPEADTRKLKKLKKSSPPEKPGSPPEIPIYEALAPGPSLAPAPAPGPGGPHHHFNGELQVKDFIKTLLHYGGYNEMADILVNLTSLATEMSRLVSEGYVLTVLAPNDDAMAKLTTEELSEPGSPEEIMYYHIIPEYQTEESMYNAVRRFGKVSYETLRLKYKVVAQEADGSVKFGDGDGSGYLFDPDIYTDGRISVQGIDGVLFPVKENEDVPVERVKPISMMGQPRKGVVEHRRGKLLETACWMLGTFNSRIDGNLNDLKNIEYEDLAGDNGQLLWV