Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35839.t1 | XP_003596948.2 | 94.7 | 722 | 37 | 1 | 1 | 721 | 1 | 722 | 0.00E+00 | 1407.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35839.t1 | O80891 | 46.4 | 741 | 360 | 10 | 8 | 721 | 10 | 740 | 1.2e-180 | 634.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35839.t1 | G7ITV5 | 94.7 | 722 | 37 | 1 | 1 | 721 | 1 | 722 | 0.0e+00 | 1407.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene059307 | MS.gene35839 | 0.812959 | 3.26E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene35707 | MS.gene35839 | PPI |
MS.gene034349 | MS.gene35839 | PPI |
MS.gene35839 | MS.gene061307 | PPI |
MS.gene35839 | MS.gene034349 | PPI |
MS.gene35839 | MS.gene35708 | PPI |
MS.gene35839 | MS.gene059306 | PPI |
MS.gene059304 | MS.gene35839 | PPI |
MS.gene35839 | MS.gene35707 | PPI |
MS.gene66611 | MS.gene35839 | PPI |
MS.gene35839 | MS.gene059307 | PPI |
MS.gene059306 | MS.gene35839 | PPI |
MS.gene61615 | MS.gene35839 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35839.t1 | MTR_2g087980 | 94.737 | 722 | 37 | 1 | 1 | 721 | 1 | 722 | 0.0 | 1402 |
MS.gene35839.t1 | MTR_2g087960 | 88.251 | 732 | 75 | 4 | 1 | 721 | 1 | 732 | 0.0 | 1316 |
MS.gene35839.t1 | MTR_2g087960 | 87.852 | 568 | 58 | 4 | 1 | 557 | 1 | 568 | 0.0 | 1014 |
MS.gene35839.t1 | MTR_4g050000 | 59.041 | 730 | 285 | 7 | 1 | 721 | 1 | 725 | 0.0 | 867 |
MS.gene35839.t1 | MTR_2g087900 | 58.570 | 741 | 285 | 10 | 1 | 723 | 3 | 739 | 0.0 | 848 |
MS.gene35839.t1 | MTR_2g087950 | 58.003 | 731 | 285 | 8 | 1 | 721 | 1 | 719 | 0.0 | 826 |
MS.gene35839.t1 | MTR_2g087900 | 59.965 | 577 | 212 | 7 | 1 | 561 | 3 | 576 | 0.0 | 697 |
MS.gene35839.t1 | MTR_2g087900 | 59.023 | 471 | 173 | 8 | 1 | 455 | 3 | 469 | 0.0 | 541 |
MS.gene35839.t1 | MTR_2g087900 | 65.116 | 344 | 112 | 4 | 1 | 336 | 3 | 346 | 3.41e-155 | 454 |
MS.gene35839.t1 | MTR_4g130510 | 34.794 | 776 | 429 | 17 | 1 | 709 | 228 | 993 | 1.67e-132 | 417 |
MS.gene35839.t1 | MTR_8g086600 | 34.726 | 766 | 406 | 18 | 21 | 709 | 196 | 944 | 3.13e-131 | 413 |
MS.gene35839.t1 | MTR_2g016630 | 34.545 | 770 | 405 | 19 | 21 | 709 | 181 | 932 | 8.02e-131 | 412 |
MS.gene35839.t1 | MTR_3g030040 | 32.750 | 800 | 433 | 18 | 1 | 709 | 248 | 1033 | 1.06e-130 | 414 |
MS.gene35839.t1 | MTR_3g107520 | 33.935 | 775 | 412 | 16 | 21 | 709 | 281 | 1041 | 9.72e-130 | 411 |
MS.gene35839.t1 | MTR_3g060220 | 33.378 | 746 | 442 | 14 | 1 | 721 | 1 | 716 | 1.05e-129 | 402 |
MS.gene35839.t1 | MTR_3g060220 | 33.333 | 747 | 442 | 14 | 1 | 721 | 1 | 717 | 1.10e-128 | 399 |
MS.gene35839.t1 | MTR_3g060280 | 32.977 | 749 | 433 | 16 | 8 | 721 | 10 | 724 | 1.52e-128 | 399 |
MS.gene35839.t1 | MTR_8g063270 | 33.871 | 744 | 413 | 19 | 26 | 709 | 7 | 731 | 1.51e-127 | 397 |
MS.gene35839.t1 | MTR_3g060240 | 35.573 | 655 | 364 | 14 | 1 | 628 | 1 | 624 | 5.34e-127 | 395 |
MS.gene35839.t1 | MTR_1g069605 | 32.855 | 767 | 436 | 16 | 8 | 709 | 95 | 847 | 1.02e-126 | 399 |
MS.gene35839.t1 | MTR_8g063270 | 32.902 | 772 | 438 | 19 | 1 | 709 | 182 | 936 | 1.11e-125 | 398 |
MS.gene35839.t1 | MTR_4g130510 | 33.333 | 810 | 429 | 18 | 1 | 709 | 228 | 1027 | 1.78e-125 | 400 |
MS.gene35839.t1 | MTR_7g106680 | 31.852 | 810 | 444 | 17 | 1 | 720 | 206 | 997 | 7.78e-125 | 397 |
MS.gene35839.t1 | MTR_8g037260 | 32.241 | 763 | 423 | 16 | 29 | 709 | 283 | 1033 | 1.07e-123 | 395 |
MS.gene35839.t1 | MTR_1g098550 | 32.412 | 796 | 437 | 18 | 8 | 715 | 275 | 1057 | 7.64e-122 | 391 |
MS.gene35839.t1 | MTR_1g098550 | 32.412 | 796 | 437 | 18 | 8 | 715 | 271 | 1053 | 1.47e-121 | 390 |
MS.gene35839.t1 | MTR_4g130510 | 36.834 | 619 | 326 | 13 | 1 | 556 | 228 | 844 | 6.05e-118 | 375 |
MS.gene35839.t1 | MTR_3g060280 | 34.768 | 581 | 314 | 11 | 8 | 557 | 10 | 556 | 1.99e-110 | 347 |
MS.gene35839.t1 | MTR_3g060280 | 34.602 | 578 | 319 | 10 | 8 | 557 | 10 | 556 | 3.98e-110 | 346 |
MS.gene35839.t1 | MTR_5g029190 | 29.752 | 847 | 431 | 21 | 8 | 709 | 252 | 1079 | 2.15e-108 | 355 |
MS.gene35839.t1 | MTR_4g088225 | 33.137 | 679 | 422 | 16 | 45 | 713 | 57 | 713 | 6.63e-107 | 342 |
MS.gene35839.t1 | MTR_1g039445 | 29.584 | 818 | 430 | 18 | 21 | 709 | 261 | 1061 | 7.50e-107 | 351 |
MS.gene35839.t1 | MTR_4g088225 | 33.137 | 679 | 422 | 16 | 45 | 713 | 57 | 713 | 8.10e-107 | 342 |
MS.gene35839.t1 | MTR_4g077910 | 29.537 | 843 | 438 | 19 | 8 | 709 | 273 | 1100 | 2.42e-106 | 350 |
MS.gene35839.t1 | MTR_2g037830 | 31.329 | 715 | 443 | 15 | 16 | 713 | 8 | 691 | 2.12e-105 | 337 |
MS.gene35839.t1 | MTR_1g039480 | 29.433 | 829 | 425 | 18 | 26 | 709 | 276 | 1089 | 9.77e-105 | 345 |
MS.gene35839.t1 | MTR_1g073740 | 30.738 | 745 | 443 | 18 | 4 | 713 | 6 | 712 | 2.20e-104 | 336 |
MS.gene35839.t1 | MTR_0011s0020 | 30.758 | 699 | 452 | 13 | 19 | 711 | 17 | 689 | 4.90e-104 | 333 |
MS.gene35839.t1 | MTR_2g438220 | 29.271 | 837 | 444 | 22 | 8 | 709 | 159 | 982 | 1.57e-102 | 337 |
MS.gene35839.t1 | MTR_3g005560 | 30.156 | 703 | 455 | 13 | 16 | 706 | 8 | 686 | 2.67e-102 | 329 |
MS.gene35839.t1 | MTR_7g109200 | 28.839 | 853 | 447 | 20 | 2 | 709 | 291 | 1128 | 1.54e-101 | 337 |
MS.gene35839.t1 | MTR_3g450800 | 30.106 | 661 | 428 | 13 | 54 | 708 | 5 | 637 | 2.40e-97 | 314 |
MS.gene35839.t1 | MTR_2g087900 | 62.656 | 241 | 84 | 3 | 1 | 235 | 3 | 243 | 4.25e-96 | 299 |
MS.gene35839.t1 | MTR_3g005560 | 32.428 | 552 | 341 | 10 | 16 | 557 | 8 | 537 | 7.81e-94 | 303 |
MS.gene35839.t1 | MTR_2g037830 | 35.258 | 485 | 281 | 9 | 16 | 489 | 8 | 470 | 1.81e-88 | 288 |
MS.gene35839.t1 | MTR_4g130510 | 36.400 | 500 | 254 | 12 | 1 | 438 | 228 | 725 | 5.09e-88 | 292 |
MS.gene35839.t1 | MTR_8g092590 | 41.266 | 395 | 203 | 9 | 1 | 368 | 266 | 658 | 9.13e-86 | 293 |
MS.gene35839.t1 | MTR_8g092590 | 30.423 | 355 | 213 | 8 | 372 | 709 | 714 | 1051 | 4.67e-40 | 159 |
MS.gene35839.t1 | MTR_7g116230 | 29.298 | 727 | 349 | 22 | 8 | 641 | 129 | 783 | 8.87e-85 | 286 |
MS.gene35839.t1 | MTR_3g060280 | 37.340 | 391 | 207 | 7 | 8 | 367 | 10 | 393 | 1.89e-83 | 272 |
MS.gene35839.t1 | MTR_2g035780 | 41.026 | 390 | 201 | 9 | 8 | 370 | 206 | 593 | 3.88e-82 | 282 |
MS.gene35839.t1 | MTR_2g035780 | 30.060 | 336 | 214 | 7 | 381 | 709 | 678 | 999 | 9.05e-38 | 152 |
MS.gene35839.t1 | MTR_3g007770 | 40.209 | 383 | 202 | 9 | 21 | 378 | 238 | 618 | 1.28e-79 | 275 |
MS.gene35839.t1 | MTR_3g007770 | 31.343 | 335 | 215 | 7 | 381 | 709 | 679 | 1004 | 4.44e-39 | 156 |
MS.gene35839.t1 | MTR_3g005560 | 34.023 | 435 | 256 | 9 | 16 | 440 | 8 | 421 | 8.60e-75 | 248 |
MS.gene35839.t1 | MTR_3g091270 | 31.944 | 432 | 197 | 12 | 87 | 462 | 106 | 496 | 1.13e-53 | 193 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35839.t1 | AT2G32530 | 45.760 | 743 | 362 | 9 | 8 | 721 | 10 | 740 | 0.0 | 643 |
MS.gene35839.t1 | AT2G32540 | 46.299 | 743 | 358 | 11 | 8 | 721 | 10 | 740 | 0.0 | 632 |
MS.gene35839.t1 | AT4G15320 | 44.726 | 749 | 367 | 13 | 7 | 721 | 9 | 744 | 0.0 | 619 |
MS.gene35839.t1 | AT4G15320 | 44.726 | 749 | 367 | 13 | 7 | 721 | 9 | 744 | 0.0 | 619 |
MS.gene35839.t1 | AT4G15320 | 43.848 | 764 | 367 | 14 | 7 | 721 | 9 | 759 | 0.0 | 610 |
MS.gene35839.t1 | AT2G32620 | 45.749 | 741 | 367 | 9 | 8 | 721 | 10 | 742 | 0.0 | 606 |
MS.gene35839.t1 | AT2G32610 | 43.472 | 743 | 379 | 13 | 8 | 719 | 10 | 742 | 0.0 | 602 |
MS.gene35839.t1 | AT4G15290 | 43.145 | 744 | 382 | 13 | 8 | 721 | 10 | 742 | 0.0 | 577 |
MS.gene35839.t1 | AT2G32620 | 44.954 | 654 | 327 | 8 | 93 | 721 | 1 | 646 | 0.0 | 538 |
MS.gene35839.t1 | AT4G15320 | 42.547 | 691 | 306 | 12 | 7 | 633 | 9 | 672 | 0.0 | 537 |
MS.gene35839.t1 | AT2G32620 | 46.901 | 597 | 294 | 7 | 8 | 589 | 10 | 598 | 7.57e-179 | 524 |
MS.gene35839.t1 | AT4G15320 | 40.191 | 734 | 305 | 13 | 7 | 633 | 9 | 715 | 8.00e-174 | 519 |
MS.gene35839.t1 | AT2G32620 | 48.566 | 523 | 243 | 7 | 8 | 513 | 10 | 523 | 4.29e-160 | 474 |
MS.gene35839.t1 | AT5G17420 | 34.699 | 781 | 424 | 18 | 1 | 709 | 215 | 981 | 1.00e-134 | 423 |
MS.gene35839.t1 | AT4G18780 | 34.833 | 778 | 405 | 15 | 16 | 709 | 179 | 938 | 1.66e-134 | 422 |
MS.gene35839.t1 | AT4G32410 | 34.168 | 799 | 421 | 19 | 1 | 709 | 252 | 1035 | 4.30e-133 | 420 |
MS.gene35839.t1 | AT5G09870 | 33.291 | 796 | 432 | 16 | 1 | 709 | 241 | 1024 | 7.73e-133 | 419 |
MS.gene35839.t1 | AT5G05170 | 33.709 | 798 | 427 | 18 | 1 | 709 | 236 | 1020 | 1.51e-132 | 419 |
MS.gene35839.t1 | AT2G25540 | 34.085 | 798 | 423 | 20 | 1 | 709 | 232 | 1015 | 3.59e-130 | 412 |
MS.gene35839.t1 | AT1G55850 | 35.074 | 747 | 406 | 20 | 8 | 723 | 18 | 716 | 2.07e-129 | 401 |
MS.gene35839.t1 | AT5G64740 | 32.918 | 802 | 430 | 16 | 1 | 709 | 253 | 1039 | 5.06e-129 | 410 |
MS.gene35839.t1 | AT2G21770 | 33.585 | 795 | 431 | 20 | 1 | 709 | 259 | 1042 | 5.59e-127 | 404 |
MS.gene35839.t1 | AT4G24000 | 32.565 | 694 | 422 | 12 | 27 | 709 | 34 | 692 | 1.89e-111 | 354 |
MS.gene35839.t1 | AT4G23990 | 32.042 | 671 | 403 | 11 | 57 | 709 | 86 | 721 | 8.91e-111 | 353 |
MS.gene35839.t1 | AT4G24010 | 33.283 | 658 | 382 | 14 | 57 | 696 | 67 | 685 | 3.58e-110 | 352 |
MS.gene35839.t1 | AT1G32180 | 29.769 | 823 | 437 | 17 | 25 | 710 | 123 | 941 | 7.57e-107 | 348 |
MS.gene35839.t1 | AT1G32180 | 29.769 | 823 | 437 | 17 | 25 | 710 | 123 | 941 | 7.57e-107 | 348 |
MS.gene35839.t1 | AT4G38190 | 28.837 | 808 | 435 | 17 | 26 | 709 | 273 | 1064 | 3.19e-105 | 347 |
MS.gene35839.t1 | AT2G33100 | 29.489 | 841 | 443 | 20 | 8 | 709 | 167 | 996 | 8.23e-105 | 344 |
MS.gene35839.t1 | AT2G33100 | 29.489 | 841 | 443 | 20 | 8 | 709 | 167 | 996 | 8.23e-105 | 344 |
MS.gene35839.t1 | AT1G02730 | 29.036 | 861 | 442 | 20 | 2 | 709 | 296 | 1140 | 7.47e-103 | 341 |
MS.gene35839.t1 | AT3G03050 | 29.132 | 841 | 442 | 17 | 8 | 709 | 278 | 1103 | 3.78e-101 | 336 |
MS.gene35839.t1 | AT5G16910 | 29.498 | 817 | 431 | 17 | 23 | 709 | 302 | 1103 | 1.53e-99 | 332 |
MS.gene35839.t1 | AT4G39350 | 41.162 | 396 | 202 | 10 | 1 | 368 | 254 | 646 | 7.42e-85 | 290 |
MS.gene35839.t1 | AT4G39350 | 29.969 | 327 | 216 | 5 | 386 | 709 | 722 | 1038 | 4.18e-35 | 144 |
MS.gene35839.t1 | AT5G44030 | 40.256 | 390 | 204 | 9 | 8 | 370 | 199 | 586 | 2.97e-81 | 280 |
MS.gene35839.t1 | AT5G44030 | 30.462 | 325 | 215 | 4 | 388 | 709 | 688 | 1004 | 2.53e-37 | 150 |
MS.gene35839.t1 | AT5G44030 | 40.256 | 390 | 204 | 9 | 8 | 370 | 228 | 615 | 4.50e-81 | 280 |
MS.gene35839.t1 | AT5G44030 | 30.462 | 325 | 215 | 4 | 388 | 709 | 717 | 1033 | 1.95e-37 | 151 |
MS.gene35839.t1 | AT4G24000 | 32.022 | 534 | 312 | 12 | 192 | 709 | 2 | 500 | 1.97e-74 | 250 |
MS.gene35839.t1 | AT5G44030 | 43.813 | 299 | 153 | 5 | 86 | 370 | 10 | 307 | 1.04e-72 | 251 |
MS.gene35839.t1 | AT5G44030 | 30.462 | 325 | 215 | 4 | 388 | 709 | 409 | 725 | 6.90e-38 | 151 |
MS.gene35839.t1 | AT4G23990 | 30.499 | 541 | 318 | 12 | 192 | 709 | 2 | 507 | 5.67e-71 | 241 |
Find 153 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTTGGTAAAATCCAATTT+AGG | 0.109508 | 2.1:+13833078 | MS.gene35839:CDS |
AGCACTTGTTATTAAGATTT+TGG | 0.119897 | 2.1:+13833959 | MS.gene35839:CDS |
AACCCAAAACTTAGCAAATT+TGG | 0.129090 | 2.1:-13830925 | None:intergenic |
CTACAAGAGTATAAAGTAAA+AGG | 0.191998 | 2.1:+13833690 | MS.gene35839:CDS |
CTTCCAAATTTGCTAAGTTT+TGG | 0.203327 | 2.1:+13830922 | MS.gene35839:CDS |
GATTGCTTCCTCTATAAAAT+TGG | 0.205458 | 2.1:-13832680 | None:intergenic |
ATCAACAAGTGTATGGTTTA+TGG | 0.206587 | 2.1:+13833761 | MS.gene35839:CDS |
TTGTAATTGTGTTCATAATT+TGG | 0.215230 | 2.1:-13831659 | None:intergenic |
CACAGAAGATATGCTATTTA+CGG | 0.237161 | 2.1:+13832161 | MS.gene35839:CDS |
CCTGTTATGGGTACCCTCTT+TGG | 0.238815 | 2.1:+13833062 | MS.gene35839:CDS |
CTTCAGATGGGCTGGTTATA+TGG | 0.244829 | 2.1:+13832858 | MS.gene35839:intron |
AACCATTCTTGTTTGAATTC+TGG | 0.245579 | 2.1:-13831026 | None:intergenic |
AAGACAAGCCAGCCCTAAAT+TGG | 0.251195 | 2.1:-13833091 | None:intergenic |
AGTCCAACTTCTGGTGTTAT+TGG | 0.253634 | 2.1:+13833852 | MS.gene35839:CDS |
TTGGAATGAAGCTGAATTTC+GGG | 0.257400 | 2.1:-13831245 | None:intergenic |
CTTATTGTTGGCTTACCAAT+TGG | 0.259289 | 2.1:+13833111 | MS.gene35839:CDS |
CCCGAGCCAACCGCGTTTAC+AGG | 0.262333 | 2.1:+13832951 | MS.gene35839:CDS |
TAGCAAGCATTCTCCTGTTA+TGG | 0.266654 | 2.1:+13833049 | MS.gene35839:CDS |
AGTGCCATGCTTAAGCTCTT+AGG | 0.270075 | 2.1:+13833792 | MS.gene35839:CDS |
CTTTGGTAAAATCCAATTTA+GGG | 0.273325 | 2.1:+13833079 | MS.gene35839:CDS |
TTGCTTTCTCATGTGAATCT+TGG | 0.274164 | 2.1:+13830083 | MS.gene35839:CDS |
TATCCTAATCAAATACAATA+TGG | 0.281501 | 2.1:+13832188 | MS.gene35839:CDS |
AGCTTCCAAAAGACCATAAA+AGG | 0.292008 | 2.1:-13830901 | None:intergenic |
TTTCCATATTGTATTTGATT+AGG | 0.299333 | 2.1:-13832191 | None:intergenic |
CTGCAAATTCTCCCTCAAAT+TGG | 0.301372 | 2.1:-13831264 | None:intergenic |
TTGTTTGCTAGGGGTAAATA+TGG | 0.302310 | 2.1:+13834080 | MS.gene35839:CDS |
TATGCGTTGACAGGTTATAT+TGG | 0.311069 | 2.1:+13831583 | MS.gene35839:intron |
TTCTGGTGAATCATCACTTT+TGG | 0.313648 | 2.1:-13831009 | None:intergenic |
TGTATCTAGTAGTTTGTTAC+TGG | 0.314730 | 2.1:+13834042 | MS.gene35839:CDS |
GCTTGTTATGTTTCTGATGA+TGG | 0.315570 | 2.1:+13830864 | MS.gene35839:CDS |
GGAATAAAAGACGACCCTTT+TGG | 0.316228 | 2.1:+13831962 | MS.gene35839:CDS |
GACAATATGTAATAGGCATT+TGG | 0.317990 | 2.1:+13834306 | MS.gene35839:intron |
AGCAAGCATTCTCCTGTTAT+GGG | 0.321276 | 2.1:+13833050 | MS.gene35839:CDS |
ACATGCTATTTGCATATTGA+TGG | 0.332778 | 2.1:+13831883 | MS.gene35839:CDS |
CAGTCTACGTTCAACATAAA+AGG | 0.336254 | 2.1:-13831827 | None:intergenic |
GAATCATCCAAGTATAATTA+AGG | 0.336801 | 2.1:+13831309 | MS.gene35839:CDS |
AATAGCATGTTGCATAATCT+TGG | 0.337211 | 2.1:-13831870 | None:intergenic |
ATTGGAATGAAGCTGAATTT+CGG | 0.338929 | 2.1:-13831246 | None:intergenic |
TTATTGTTGGCTTACCAATT+GGG | 0.340053 | 2.1:+13833112 | MS.gene35839:CDS |
TCAACAAGTGTATGGTTTAT+GGG | 0.342595 | 2.1:+13833762 | MS.gene35839:CDS |
GGGCTGGCTTGTCTTATTGT+TGG | 0.343431 | 2.1:+13833099 | MS.gene35839:CDS |
CAAATACAATATGGAAATAA+AGG | 0.347147 | 2.1:+13832197 | MS.gene35839:CDS |
GCCTGTAAACGCGGTTGGCT+CGG | 0.353153 | 2.1:-13832952 | None:intergenic |
ATAATTTGGTCTCTTCTCTC+TGG | 0.366584 | 2.1:-13831645 | None:intergenic |
CATATTCACAATCAGATACT+TGG | 0.373087 | 2.1:-13832702 | None:intergenic |
TCAGCAACACAAGTTATAGA+AGG | 0.377465 | 2.1:+13832625 | MS.gene35839:CDS |
ACTTGAGAGAAATATCTAAA+AGG | 0.378307 | 2.1:-13830984 | None:intergenic |
TACCAATTGGGGTCTGCGTT+CGG | 0.380901 | 2.1:+13833124 | MS.gene35839:CDS |
TTCTGAAAGGGTTGTTTGCT+AGG | 0.385850 | 2.1:+13834069 | MS.gene35839:CDS |
AGTGGGAAAGAGTGTGGAAT+AGG | 0.391608 | 2.1:+13834002 | MS.gene35839:CDS |
TTGTTGTATTAGTACATTCT+CGG | 0.396375 | 2.1:-13832575 | None:intergenic |
ACTGTCTTATTCCAGGGAGC+TGG | 0.397150 | 2.1:+13833621 | MS.gene35839:intron |
CCAAAGAGGGTACCCATAAC+AGG | 0.401351 | 2.1:-13833062 | None:intergenic |
AATGTACTAATACAACAATT+TGG | 0.401655 | 2.1:+13832580 | MS.gene35839:CDS |
TTTATTACCTTAATTATACT+TGG | 0.407006 | 2.1:-13831316 | None:intergenic |
TAGCACTTGTTGGGGTAAAC+AGG | 0.409962 | 2.1:+13832729 | MS.gene35839:CDS |
TCAATGGGTGGCTGCATTTG+AGG | 0.415447 | 2.1:+13831988 | MS.gene35839:CDS |
TATTCCAGGGAGCTGGGCTA+TGG | 0.415813 | 2.1:+13833628 | MS.gene35839:intron |
CCTGTAAACGCGGTTGGCTC+GGG | 0.421920 | 2.1:-13832951 | None:intergenic |
ATATGAATATAGCACTTGTT+GGG | 0.423823 | 2.1:+13832720 | MS.gene35839:CDS |
TGAATATGCAAAGGAAAGGT+TGG | 0.428367 | 2.1:+13832910 | MS.gene35839:CDS |
GACCGAACGCAGACCCCAAT+TGG | 0.428493 | 2.1:-13833126 | None:intergenic |
CAACAAAAGAGATGGTCTTC+AGG | 0.429438 | 2.1:+13833008 | MS.gene35839:CDS |
GTGCCATGCTTAAGCTCTTA+GGG | 0.430274 | 2.1:+13833793 | MS.gene35839:CDS |
GCAAACAACCCTTTCAGAAA+TGG | 0.433149 | 2.1:-13834065 | None:intergenic |
TTCAGCTTCATTCCAATTTG+AGG | 0.436875 | 2.1:+13831252 | MS.gene35839:CDS |
TGACTTGAAAATGGTAGATA+AGG | 0.439979 | 2.1:-13834108 | None:intergenic |
TACCGTTGAAGGAGACGGTT+TGG | 0.441157 | 2.1:-13830169 | None:intergenic |
GGACTTCAAGGACCATACTA+TGG | 0.444865 | 2.1:+13832122 | MS.gene35839:CDS |
GTTACTGGCCATTTCTGAAA+GGG | 0.448294 | 2.1:+13834057 | MS.gene35839:CDS |
GGGAGTGATTATTCTACTAA+TGG | 0.449793 | 2.1:+13832646 | MS.gene35839:CDS |
TTTATATTACATACCGTTGA+AGG | 0.450188 | 2.1:-13830180 | None:intergenic |
CACCAGAATTCAAACAAGAA+TGG | 0.451883 | 2.1:+13831024 | MS.gene35839:CDS |
GTGTTTGATCCTCCATAGTA+TGG | 0.454323 | 2.1:-13832134 | None:intergenic |
CAATAAGATCAACAAGTGTA+TGG | 0.456139 | 2.1:+13833754 | MS.gene35839:CDS |
TCAGCTTCATTCCAATTTGA+GGG | 0.456850 | 2.1:+13831253 | MS.gene35839:CDS |
GTTGTGCCAACCACAAAAGC+TGG | 0.457175 | 2.1:-13833915 | None:intergenic |
ATAGCATGTTGCATAATCTT+GGG | 0.464154 | 2.1:-13831869 | None:intergenic |
TTATTCTTCTCAATACCAAA+TGG | 0.468145 | 2.1:+13830122 | MS.gene35839:CDS |
CATTGTAGTAAGTAATCCTC+CGG | 0.471086 | 2.1:-13832982 | None:intergenic |
GCCACCCATTGATTTCCAAA+AGG | 0.473772 | 2.1:-13831977 | None:intergenic |
ACAAGAATGGTTACAAATGA+AGG | 0.473858 | 2.1:+13831037 | MS.gene35839:CDS |
TGTCAACTGCACAAGCAAAA+TGG | 0.478341 | 2.1:-13833937 | None:intergenic |
GGTAAAATCCAATTTAGGGC+TGG | 0.479956 | 2.1:+13833083 | MS.gene35839:CDS |
TGTTTGCTAGGGGTAAATAT+GGG | 0.481543 | 2.1:+13834081 | MS.gene35839:CDS |
GTTAACAGCAGGACTCCATT+TGG | 0.481702 | 2.1:-13830137 | None:intergenic |
ATGATTGGTGGTTCTAGAAC+AGG | 0.483104 | 2.1:-13830786 | None:intergenic |
CCACCCATTGATTTCCAAAA+GGG | 0.486982 | 2.1:-13831976 | None:intergenic |
TCTGAAAGGGTTGTTTGCTA+GGG | 0.487780 | 2.1:+13834070 | MS.gene35839:CDS |
CAAAAGGAAAGTCCAACTTC+TGG | 0.490074 | 2.1:+13833843 | MS.gene35839:CDS |
AATTTGCAGACAAGAGTCTC+TGG | 0.491545 | 2.1:+13831788 | MS.gene35839:intron |
TAACAAGCTAGCTTATTAGC+TGG | 0.493726 | 2.1:-13830849 | None:intergenic |
TACCAACACATTCATAGCTC+CGG | 0.494183 | 2.1:-13831684 | None:intergenic |
TACAAGAGTATAAAGTAAAA+GGG | 0.495125 | 2.1:+13833691 | MS.gene35839:CDS |
ATATTGGATGGTCATTCTGA+TGG | 0.497574 | 2.1:+13831599 | MS.gene35839:CDS |
AATATGAATATAGCACTTGT+TGG | 0.497803 | 2.1:+13832719 | MS.gene35839:CDS |
AGTCTTTGAAGTAACACAAA+AGG | 0.498554 | 2.1:+13833827 | MS.gene35839:CDS |
GGTAACAAAGAAGAGAGAAT+AGG | 0.498755 | 2.1:-13830027 | None:intergenic |
ATATCAGAAGATGTACCAAC+TGG | 0.500267 | 2.1:+13832885 | MS.gene35839:CDS |
GCGTTTACAGGCTGTGCTCC+CGG | 0.502923 | 2.1:+13832963 | MS.gene35839:CDS |
GACTTGAAAATGGTAGATAA+GGG | 0.503820 | 2.1:-13834107 | None:intergenic |
CGTTGACAGGTTATATTGGA+TGG | 0.505316 | 2.1:+13831587 | MS.gene35839:intron |
CTGTCTTATTCCAGGGAGCT+GGG | 0.505938 | 2.1:+13833622 | MS.gene35839:intron |
TATTGTTGGCTTACCAATTG+GGG | 0.508021 | 2.1:+13833113 | MS.gene35839:CDS |
ATATTATACTTCTTACAGAA+AGG | 0.520036 | 2.1:-13830948 | None:intergenic |
TTGTGAAGGTGTTGTTGATA+CGG | 0.520835 | 2.1:-13830048 | None:intergenic |
TGATTATGCAATATGCAACT+AGG | 0.523140 | 2.1:-13833169 | None:intergenic |
CGTAAATAGCATATCTTCTG+TGG | 0.523357 | 2.1:-13832160 | None:intergenic |
AATCTTGGTTCACATACACT+TGG | 0.525534 | 2.1:+13830098 | MS.gene35839:CDS |
GCTTCCTCTATAAAATTGGA+AGG | 0.528133 | 2.1:-13832676 | None:intergenic |
ACAACAATTTGGAAGTTCAA+AGG | 0.535086 | 2.1:+13832591 | MS.gene35839:CDS |
CTTTGCATATTCAATCCAGT+TGG | 0.535136 | 2.1:-13832900 | None:intergenic |
GATTATGCAATATGCAACTA+GGG | 0.540386 | 2.1:-13833168 | None:intergenic |
GTTCAACATAAAAGGAGCAT+TGG | 0.542027 | 2.1:-13831819 | None:intergenic |
ACAACACCTTCACAATTCCA+TGG | 0.549695 | 2.1:+13830056 | MS.gene35839:CDS |
TGTTACTGGCCATTTCTGAA+AGG | 0.550252 | 2.1:+13834056 | MS.gene35839:CDS |
TCTCCAATAACACCAGAAGT+TGG | 0.551519 | 2.1:-13833855 | None:intergenic |
TGCAATTAGAAGCTCATAGT+GGG | 0.552228 | 2.1:+13833985 | MS.gene35839:CDS |
ACAGTGTTCAATGTGATGAT+TGG | 0.552842 | 2.1:-13830801 | None:intergenic |
TATGAACACAATTACAAAGC+CGG | 0.562840 | 2.1:+13831665 | MS.gene35839:CDS |
AACAAAGAAGAGAGAATAGG+AGG | 0.565555 | 2.1:-13830024 | None:intergenic |
TGCTAAAGAAGACAACTGTA+AGG | 0.565575 | 2.1:-13833031 | None:intergenic |
GTGCAATTAGAAGCTCATAG+TGG | 0.566989 | 2.1:+13833984 | MS.gene35839:CDS |
ATCCAAACCGTCTCCTTCAA+CGG | 0.575866 | 2.1:+13830167 | MS.gene35839:CDS |
CTGAAAGGGTTGTTTGCTAG+GGG | 0.575876 | 2.1:+13834071 | MS.gene35839:CDS |
CATGAGAAAGCAAGAAACCA+TGG | 0.578989 | 2.1:-13830073 | None:intergenic |
TTGTGCCAACCACAAAAGCT+GGG | 0.580530 | 2.1:-13833914 | None:intergenic |
ATATTGATGGATTCTAAGAA+CGG | 0.581409 | 2.1:+13831896 | MS.gene35839:CDS |
GTGTTCAATGTGATGATTGG+TGG | 0.582750 | 2.1:-13830798 | None:intergenic |
TTGGTGGAACAATCAGAGAA+TGG | 0.583369 | 2.1:+13833728 | MS.gene35839:CDS |
CAGCAACACAAGTTATAGAA+GGG | 0.583862 | 2.1:+13832626 | MS.gene35839:CDS |
GCACAGCCTGTAAACGCGGT+TGG | 0.586028 | 2.1:-13832957 | None:intergenic |
AATAGCATATCTTCTGTGGA+AGG | 0.597992 | 2.1:-13832156 | None:intergenic |
TTACATACCGTTGAAGGAGA+CGG | 0.598803 | 2.1:-13830174 | None:intergenic |
ATTGGAGATGATGCAAATGC+TGG | 0.605052 | 2.1:+13833870 | MS.gene35839:CDS |
AGTACAGGAGCTTCCATGTG+TGG | 0.605203 | 2.1:+13830740 | MS.gene35839:CDS |
CAATGATCCAACAAAAGAGA+TGG | 0.612047 | 2.1:+13833000 | MS.gene35839:CDS |
AGCCGGAGCTATGAATGTGT+TGG | 0.613715 | 2.1:+13831682 | MS.gene35839:CDS |
CAACTGGATTGAATATGCAA+AGG | 0.619420 | 2.1:+13832901 | MS.gene35839:CDS |
AAGAAACCATGGAATTGTGA+AGG | 0.621466 | 2.1:-13830062 | None:intergenic |
TATGAATATAGCACTTGTTG+GGG | 0.627581 | 2.1:+13832721 | MS.gene35839:CDS |
CTGGATATGTAGATTAAGTG+AGG | 0.630306 | 2.1:-13831626 | None:intergenic |
ATTGTAGTAAGTAATCCTCC+GGG | 0.635850 | 2.1:-13832981 | None:intergenic |
GGATTGAATATGCAAAGGAA+AGG | 0.635952 | 2.1:+13832906 | MS.gene35839:CDS |
GCTCATAGTGGGAAAGAGTG+TGG | 0.637563 | 2.1:+13833996 | MS.gene35839:CDS |
TATCCCTAAGAGCTTAAGCA+TGG | 0.651527 | 2.1:-13833796 | None:intergenic |
GGGAGCACAGCCTGTAAACG+CGG | 0.667882 | 2.1:-13832961 | None:intergenic |
CTTCAAGGACCATACTATGG+AGG | 0.676748 | 2.1:+13832125 | MS.gene35839:CDS |
TTTACAGGCTGTGCTCCCGG+AGG | 0.680678 | 2.1:+13832966 | MS.gene35839:CDS |
GTCACAAACAAATCCACACA+TGG | 0.687294 | 2.1:-13830753 | None:intergenic |
TGTGCCAACCACAAAAGCTG+GGG | 0.694857 | 2.1:-13833913 | None:intergenic |
GAGATGATGCAAATGCTGGT+AGG | 0.699231 | 2.1:+13833874 | MS.gene35839:CDS |
GTTGAACGTAGACTGTGACA+TGG | 0.762585 | 2.1:+13831835 | MS.gene35839:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATTACCTTAATTATACT+TGG | - | chr2.1:13831319-13831338 | None:intergenic | 15.0% |
!!! | AAATTTAGACAACTTTTTAA+GGG | - | chr2.1:13830643-13830662 | None:intergenic | 15.0% |
!!! | TTTTGGAAATAATATAACAA+CGG | + | chr2.1:13833471-13833490 | MS.gene35839:intron | 15.0% |
!! | AAACTAATTAGCAAGATAAA+TGG | - | chr2.1:13830677-13830696 | None:intergenic | 20.0% |
!! | AATGTACTAATACAACAATT+TGG | + | chr2.1:13832580-13832599 | MS.gene35839:CDS | 20.0% |
!! | AATGTTTGACAATATGTAAT+AGG | + | chr2.1:13834299-13834318 | MS.gene35839:intron | 20.0% |
!! | AGTTGAAAACTTGAAAATTA+TGG | + | chr2.1:13830556-13830575 | MS.gene35839:intron | 20.0% |
!! | ATATTATACTTCTTACAGAA+AGG | - | chr2.1:13830951-13830970 | None:intergenic | 20.0% |
!! | ATTTGTTCAATTATAGAACA+AGG | - | chr2.1:13831386-13831405 | None:intergenic | 20.0% |
!! | CAAAAACTGTTAAAATTAGT+CGG | - | chr2.1:13833456-13833475 | None:intergenic | 20.0% |
!! | CAAATACAATATGGAAATAA+AGG | + | chr2.1:13832197-13832216 | MS.gene35839:CDS | 20.0% |
!! | CATTTAATCATAAAATCAGT+TGG | + | chr2.1:13833309-13833328 | MS.gene35839:intron | 20.0% |
!! | CTTAAAAAGTTGTCTAAATT+TGG | + | chr2.1:13830642-13830661 | MS.gene35839:intron | 20.0% |
!! | TACAAACACAAATTTATAAG+TGG | - | chr2.1:13832055-13832074 | None:intergenic | 20.0% |
!! | TATCCTAATCAAATACAATA+TGG | + | chr2.1:13832188-13832207 | MS.gene35839:CDS | 20.0% |
!! | TATTCTCAAATACAGAAAAA+AGG | + | chr2.1:13831287-13831306 | MS.gene35839:CDS | 20.0% |
!! | TTGTAATTGTGTTCATAATT+TGG | - | chr2.1:13831662-13831681 | None:intergenic | 20.0% |
!! | TTTAATTCTATAGTTACCTA+AGG | - | chr2.1:13834235-13834254 | None:intergenic | 20.0% |
!! | TTTCCATATTGTATTTGATT+AGG | - | chr2.1:13832194-13832213 | None:intergenic | 20.0% |
!!! | AATTTAGACAACTTTTTAAG+GGG | - | chr2.1:13830642-13830661 | None:intergenic | 20.0% |
!!! | ATAATTGAACAAATTTTAGC+AGG | + | chr2.1:13831392-13831411 | MS.gene35839:intron | 20.0% |
!!! | CAAATTTAGACAACTTTTTA+AGG | - | chr2.1:13830644-13830663 | None:intergenic | 20.0% |
!!! | TACAAGAGTATAAAGTAAAA+GGG | + | chr2.1:13833691-13833710 | MS.gene35839:CDS | 20.0% |
!!! | TATTTTATCAGAATGTGATA+TGG | + | chr2.1:13832263-13832282 | MS.gene35839:intron | 20.0% |
!!! | TTATTCCATCGTAAAATTTT+TGG | - | chr2.1:13831949-13831968 | None:intergenic | 20.0% |
!!! | TTGTGTAATTTTATAGTCTA+AGG | - | chr2.1:13832797-13832816 | None:intergenic | 20.0% |
! | AATATGAATATAGCACTTGT+TGG | + | chr2.1:13832719-13832738 | MS.gene35839:CDS | 25.0% |
! | ACTTGAGAGAAATATCTAAA+AGG | - | chr2.1:13830987-13831006 | None:intergenic | 25.0% |
! | AGAAATACTTGGAAGAATTT+AGG | - | chr2.1:13831446-13831465 | None:intergenic | 25.0% |
! | ATAAGTATCTAAATCTATGG+TGG | + | chr2.1:13831105-13831124 | MS.gene35839:intron | 25.0% |
! | ATAGAAATCCATTAAATCTC+AGG | - | chr2.1:13834195-13834214 | None:intergenic | 25.0% |
! | ATATGAATATAGCACTTGTT+GGG | + | chr2.1:13832720-13832739 | MS.gene35839:CDS | 25.0% |
! | ATATTACTCCTGAGATTTAA+TGG | + | chr2.1:13834184-13834203 | MS.gene35839:intron | 25.0% |
! | ATGGATTTCTATGTACAAAA+TGG | + | chr2.1:13834203-13834222 | MS.gene35839:intron | 25.0% |
! | CTCATTCTTATCTTTCTTAA+CGG | + | chr2.1:13831764-13831783 | MS.gene35839:intron | 25.0% |
! | CTTTGGTAAAATCCAATTTA+GGG | + | chr2.1:13833079-13833098 | MS.gene35839:CDS | 25.0% |
! | GAAATAATATAACAACGGTT+AGG | + | chr2.1:13833476-13833495 | MS.gene35839:intron | 25.0% |
! | GAATCATCCAAGTATAATTA+AGG | + | chr2.1:13831309-13831328 | MS.gene35839:CDS | 25.0% |
! | GAGATAAGTATCTAAATCTA+TGG | + | chr2.1:13831102-13831121 | MS.gene35839:intron | 25.0% |
! | GTTAATGCAGATTAAAGATA+AGG | - | chr2.1:13830620-13830639 | None:intergenic | 25.0% |
! | TAAATTCTTCCAAGTATTTC+TGG | + | chr2.1:13831445-13831464 | MS.gene35839:intron | 25.0% |
! | TATGCTTGAGTAATTATATG+AGG | + | chr2.1:13832463-13832482 | MS.gene35839:intron | 25.0% |
! | TCATTCTTATCTTTCTTAAC+GGG | + | chr2.1:13831765-13831784 | MS.gene35839:intron | 25.0% |
! | TCTTTGGTAAAATCCAATTT+AGG | + | chr2.1:13833078-13833097 | MS.gene35839:CDS | 25.0% |
! | TGGATTTCTATGTACAAAAT+GGG | + | chr2.1:13834204-13834223 | MS.gene35839:intron | 25.0% |
! | TTATTCTTCTCAATACCAAA+TGG | + | chr2.1:13830122-13830141 | MS.gene35839:CDS | 25.0% |
! | TTGTTGTATTAGTACATTCT+CGG | - | chr2.1:13832578-13832597 | None:intergenic | 25.0% |
! | TTTATATTACATACCGTTGA+AGG | - | chr2.1:13830183-13830202 | None:intergenic | 25.0% |
!! | AAATTGGATTTTACCAAAGA+GGG | - | chr2.1:13833078-13833097 | None:intergenic | 25.0% |
!! | AAGGGTTTTCATTAAGATAT+TGG | + | chr2.1:13833709-13833728 | MS.gene35839:CDS | 25.0% |
!! | CTACAAGAGTATAAAGTAAA+AGG | + | chr2.1:13833690-13833709 | MS.gene35839:CDS | 25.0% |
!! | CTCAATGTTTAATTTAACCT+TGG | - | chr2.1:13833246-13833265 | None:intergenic | 25.0% |
!! | TAAATTGGATTTTACCAAAG+AGG | - | chr2.1:13833079-13833098 | None:intergenic | 25.0% |
!! | TGTTTCCAAAAATTTTACGA+TGG | + | chr2.1:13831941-13831960 | MS.gene35839:CDS | 25.0% |
!! | TTTTACCTTTTATGGTCTTT+TGG | + | chr2.1:13830896-13830915 | MS.gene35839:CDS | 25.0% |
!!! | ACTTGTTATTAAGATTTTGG+GGG | + | chr2.1:13833962-13833981 | MS.gene35839:CDS | 25.0% |
!!! | AGCACTTGTTATTAAGATTT+TGG | + | chr2.1:13833959-13833978 | MS.gene35839:CDS | 25.0% |
!!! | ATATTGATGGATTCTAAGAA+CGG | + | chr2.1:13831896-13831915 | MS.gene35839:CDS | 25.0% |
!!! | ATCCATATTTTTTCATACAG+AGG | - | chr2.1:13829962-13829981 | None:intergenic | 25.0% |
!!! | CACTTGTTATTAAGATTTTG+GGG | + | chr2.1:13833961-13833980 | MS.gene35839:CDS | 25.0% |
!!! | CGACTAATTTTAACAGTTTT+TGG | + | chr2.1:13833454-13833473 | MS.gene35839:intron | 25.0% |
!!! | GACAACGTTTTAATAAAGTT+CGG | + | chr2.1:13830434-13830453 | MS.gene35839:intron | 25.0% |
!!! | GCACTTGTTATTAAGATTTT+GGG | + | chr2.1:13833960-13833979 | MS.gene35839:CDS | 25.0% |
!!! | TATCTTTTGAAACTTCAGAT+GGG | + | chr2.1:13832846-13832865 | MS.gene35839:intron | 25.0% |
!!! | TCCATATTTTTTCATACAGA+GGG | - | chr2.1:13829961-13829980 | None:intergenic | 25.0% |
!!! | TGTTCTGTTTTTACCTTTTA+TGG | + | chr2.1:13830888-13830907 | MS.gene35839:CDS | 25.0% |
!!! | TTATCTTTTGAAACTTCAGA+TGG | + | chr2.1:13832845-13832864 | MS.gene35839:intron | 25.0% |
!!! | TTCCAAATTTGCTAAGTTTT+GGG | + | chr2.1:13830923-13830942 | MS.gene35839:CDS | 25.0% |
AAACTCATTAACCACCAATT+TGG | - | chr2.1:13830592-13830611 | None:intergenic | 30.0% | |
AACCCAAAACTTAGCAAATT+TGG | - | chr2.1:13830928-13830947 | None:intergenic | 30.0% | |
AACTCATATGTGAGTCAATT+AGG | - | chr2.1:13831538-13831557 | None:intergenic | 30.0% | |
AATAGCATGTTGCATAATCT+TGG | - | chr2.1:13831873-13831892 | None:intergenic | 30.0% | |
ACAACAATTTGGAAGTTCAA+AGG | + | chr2.1:13832591-13832610 | MS.gene35839:CDS | 30.0% | |
ACAAGAATGGTTACAAATGA+AGG | + | chr2.1:13831037-13831056 | MS.gene35839:CDS | 30.0% | |
AGAAAGATAAGAATGAGTCT+CGG | - | chr2.1:13831761-13831780 | None:intergenic | 30.0% | |
AGATTAGCGATGAAATACTA+AGG | - | chr2.1:13834267-13834286 | None:intergenic | 30.0% | |
ATAGCATGTTGCATAATCTT+GGG | - | chr2.1:13831872-13831891 | None:intergenic | 30.0% | |
ATCAACAAGTGTATGGTTTA+TGG | + | chr2.1:13833761-13833780 | MS.gene35839:CDS | 30.0% | |
ATTGGAATGAAGCTGAATTT+CGG | - | chr2.1:13831249-13831268 | None:intergenic | 30.0% | |
CAAGTAACAAATTTGTAGGA+TGG | + | chr2.1:13831141-13831160 | MS.gene35839:intron | 30.0% | |
CAATAAGATCAACAAGTGTA+TGG | + | chr2.1:13833754-13833773 | MS.gene35839:CDS | 30.0% | |
CAGGAGTAATATCAACTTAT+AGG | - | chr2.1:13834176-13834195 | None:intergenic | 30.0% | |
CATATTCACAATCAGATACT+TGG | - | chr2.1:13832705-13832724 | None:intergenic | 30.0% | |
GACAATATGTAATAGGCATT+TGG | + | chr2.1:13834306-13834325 | MS.gene35839:intron | 30.0% | |
GACTTGAAAATGGTAGATAA+GGG | - | chr2.1:13834110-13834129 | None:intergenic | 30.0% | |
GATTATGCAATATGCAACTA+GGG | - | chr2.1:13833171-13833190 | None:intergenic | 30.0% | |
GATTGCTTCCTCTATAAAAT+TGG | - | chr2.1:13832683-13832702 | None:intergenic | 30.0% | |
TATGAACACAATTACAAAGC+CGG | + | chr2.1:13831665-13831684 | MS.gene35839:CDS | 30.0% | |
TCAACAAGTGTATGGTTTAT+GGG | + | chr2.1:13833762-13833781 | MS.gene35839:CDS | 30.0% | |
TCCCTCTGTATGAAAAAATA+TGG | + | chr2.1:13829957-13829976 | MS.gene35839:CDS | 30.0% | |
TGACAATCTTAGCCAAAAAA+TGG | + | chr2.1:13831213-13831232 | MS.gene35839:CDS | 30.0% | |
TGACTTGAAAATGGTAGATA+AGG | - | chr2.1:13834111-13834130 | None:intergenic | 30.0% | |
TGATTATGCAATATGCAACT+AGG | - | chr2.1:13833172-13833191 | None:intergenic | 30.0% | |
TGCACAAGTAACAAATTTGT+AGG | + | chr2.1:13831137-13831156 | MS.gene35839:intron | 30.0% | |
TGTGACTCAATCAATAGTTA+TGG | + | chr2.1:13830264-13830283 | MS.gene35839:intron | 30.0% | |
TGTTAAAATTAGTCGGAGAT+TGG | - | chr2.1:13833449-13833468 | None:intergenic | 30.0% | |
TTCGCAGAGCTAAATAATAT+TGG | - | chr2.1:13831720-13831739 | None:intergenic | 30.0% | |
! | AACCATTCTTGTTTGAATTC+TGG | - | chr2.1:13831029-13831048 | None:intergenic | 30.0% |
! | ACATGCTATTTGCATATTGA+TGG | + | chr2.1:13831883-13831902 | MS.gene35839:CDS | 30.0% |
! | ATTGAGCTTAAGTTGTTAAC+TGG | - | chr2.1:13832425-13832444 | None:intergenic | 30.0% |
! | CACAGAAGATATGCTATTTA+CGG | + | chr2.1:13832161-13832180 | MS.gene35839:CDS | 30.0% |
! | GGTTTTCATTAAGATATTGG+TGG | + | chr2.1:13833712-13833731 | MS.gene35839:CDS | 30.0% |
! | TAGTCCTTCCAATTTTATAG+AGG | + | chr2.1:13832672-13832691 | MS.gene35839:CDS | 30.0% |
! | TATGAATATAGCACTTGTTG+GGG | + | chr2.1:13832721-13832740 | MS.gene35839:CDS | 30.0% |
! | TTTTTATCCTCATAGAGTAC+AGG | + | chr2.1:13830725-13830744 | MS.gene35839:intron | 30.0% |
!! | AAAAAGTGCTGACTTGAAAA+TGG | - | chr2.1:13834120-13834139 | None:intergenic | 30.0% |
!! | AGTCTTTGAAGTAACACAAA+AGG | + | chr2.1:13833827-13833846 | MS.gene35839:CDS | 30.0% |
!! | CGCTATTTTGTATCTTTACT+AGG | + | chr2.1:13832544-13832563 | MS.gene35839:intron | 30.0% |
!! | TGTATCTAGTAGTTTGTTAC+TGG | + | chr2.1:13834042-13834061 | MS.gene35839:CDS | 30.0% |
!! | TTATTGTTGGCTTACCAATT+GGG | + | chr2.1:13833112-13833131 | MS.gene35839:CDS | 30.0% |
!! | TTGTTAACTGGTTCTAGTTA+AGG | - | chr2.1:13832413-13832432 | None:intergenic | 30.0% |
!!! | CTTCCAAATTTGCTAAGTTT+TGG | + | chr2.1:13830922-13830941 | MS.gene35839:CDS | 30.0% |
!!! | GTTTTTTGCAGTACATGATA+GGG | + | chr2.1:13832090-13832109 | MS.gene35839:intron | 30.0% |
!!! | TGTTTTTTGCAGTACATGAT+AGG | + | chr2.1:13832089-13832108 | MS.gene35839:intron | 30.0% |
!!! | TTTTTTGCAGTACATGATAG+GGG | + | chr2.1:13832091-13832110 | MS.gene35839:intron | 30.0% |
AACAAAGAAGAGAGAATAGG+AGG | - | chr2.1:13830027-13830046 | None:intergenic | 35.0% | |
AAGAAACCATGGAATTGTGA+AGG | - | chr2.1:13830065-13830084 | None:intergenic | 35.0% | |
AATAGCATATCTTCTGTGGA+AGG | - | chr2.1:13832159-13832178 | None:intergenic | 35.0% | |
AATCTTGGTTCACATACACT+TGG | + | chr2.1:13830098-13830117 | MS.gene35839:CDS | 35.0% | |
ACACAAAGACGAATCATCAA+TGG | - | chr2.1:13831175-13831194 | None:intergenic | 35.0% | |
ACAGTGTTCAATGTGATGAT+TGG | - | chr2.1:13830804-13830823 | None:intergenic | 35.0% | |
AGCTTCCAAAAGACCATAAA+AGG | - | chr2.1:13830904-13830923 | None:intergenic | 35.0% | |
ATAATTTGGTCTCTTCTCTC+TGG | - | chr2.1:13831648-13831667 | None:intergenic | 35.0% | |
ATATCAGAAGATGTACCAAC+TGG | + | chr2.1:13832885-13832904 | MS.gene35839:CDS | 35.0% | |
ATATTGGATGGTCATTCTGA+TGG | + | chr2.1:13831599-13831618 | MS.gene35839:CDS | 35.0% | |
ATGCAAGAACCAGAAATACT+TGG | - | chr2.1:13831457-13831476 | None:intergenic | 35.0% | |
ATGGTTAACCATGTCCAAAT+TGG | + | chr2.1:13830575-13830594 | MS.gene35839:intron | 35.0% | |
ATGTCTCAGTTTATATGTCG+CGG | + | chr2.1:13830316-13830335 | MS.gene35839:intron | 35.0% | |
ATTAACCACCAATTTGGACA+TGG | - | chr2.1:13830586-13830605 | None:intergenic | 35.0% | |
ATTAGTTGCAACTTGCAAGT+TGG | - | chr2.1:13833421-13833440 | None:intergenic | 35.0% | |
ATTGTAGTAAGTAATCCTCC+GGG | - | chr2.1:13832984-13833003 | None:intergenic | 35.0% | |
CAACTGGATTGAATATGCAA+AGG | + | chr2.1:13832901-13832920 | MS.gene35839:CDS | 35.0% | |
CAATGATCCAACAAAAGAGA+TGG | + | chr2.1:13833000-13833019 | MS.gene35839:CDS | 35.0% | |
CACCAGAATTCAAACAAGAA+TGG | + | chr2.1:13831024-13831043 | MS.gene35839:CDS | 35.0% | |
CAGCAACACAAGTTATAGAA+GGG | + | chr2.1:13832626-13832645 | MS.gene35839:CDS | 35.0% | |
CAGTCTACGTTCAACATAAA+AGG | - | chr2.1:13831830-13831849 | None:intergenic | 35.0% | |
CATTGTAGTAAGTAATCCTC+CGG | - | chr2.1:13832985-13833004 | None:intergenic | 35.0% | |
CGTAAATAGCATATCTTCTG+TGG | - | chr2.1:13832163-13832182 | None:intergenic | 35.0% | |
CTGGATATGTAGATTAAGTG+AGG | - | chr2.1:13831629-13831648 | None:intergenic | 35.0% | |
CTTTGCATATTCAATCCAGT+TGG | - | chr2.1:13832903-13832922 | None:intergenic | 35.0% | |
GAATGTCAATATCTAACCTC+AGG | - | chr2.1:13833212-13833231 | None:intergenic | 35.0% | |
GACTAGGAATGAACTAATTG+AGG | - | chr2.1:13831507-13831526 | None:intergenic | 35.0% | |
GCTTCCTCTATAAAATTGGA+AGG | - | chr2.1:13832679-13832698 | None:intergenic | 35.0% | |
GGACACGATTGATAAAAATG+TGG | + | chr2.1:13832284-13832303 | MS.gene35839:intron | 35.0% | |
GGATTGAATATGCAAAGGAA+AGG | + | chr2.1:13832906-13832925 | MS.gene35839:CDS | 35.0% | |
GGGAGTGATTATTCTACTAA+TGG | + | chr2.1:13832646-13832665 | MS.gene35839:CDS | 35.0% | |
GGTAACAAAGAAGAGAGAAT+AGG | - | chr2.1:13830030-13830049 | None:intergenic | 35.0% | |
TAACCAGCTTGCAATTAACT+AGG | - | chr2.1:13833350-13833369 | None:intergenic | 35.0% | |
TACAAAATGGGTAACACCTT+AGG | + | chr2.1:13834216-13834235 | MS.gene35839:intron | 35.0% | |
TCAGCAACACAAGTTATAGA+AGG | + | chr2.1:13832625-13832644 | MS.gene35839:CDS | 35.0% | |
TCAGCTTCATTCCAATTTGA+GGG | + | chr2.1:13831253-13831272 | MS.gene35839:CDS | 35.0% | |
TCTAACCTCAGGAAAAATAC+TGG | - | chr2.1:13833201-13833220 | None:intergenic | 35.0% | |
TGAATATGCAAAGGAAAGGT+TGG | + | chr2.1:13832910-13832929 | MS.gene35839:CDS | 35.0% | |
TGCAATTAGAAGCTCATAGT+GGG | + | chr2.1:13833985-13834004 | MS.gene35839:CDS | 35.0% | |
TGCTAAAGAAGACAACTGTA+AGG | - | chr2.1:13833034-13833053 | None:intergenic | 35.0% | |
TGGAATAAGACAGTGTGAAA+AGG | - | chr2.1:13833615-13833634 | None:intergenic | 35.0% | |
TTCAGCTTCATTCCAATTTG+AGG | + | chr2.1:13831252-13831271 | MS.gene35839:CDS | 35.0% | |
TTGCTTTCTCATGTGAATCT+TGG | + | chr2.1:13830083-13830102 | MS.gene35839:CDS | 35.0% | |
TTGGAATGAAGCTGAATTTC+GGG | - | chr2.1:13831248-13831267 | None:intergenic | 35.0% | |
! | CAATTAGGTTCATATCGACT+AGG | - | chr2.1:13831523-13831542 | None:intergenic | 35.0% |
! | GTTCAACATAAAAGGAGCAT+TGG | - | chr2.1:13831822-13831841 | None:intergenic | 35.0% |
! | TAACAAGCTAGCTTATTAGC+TGG | - | chr2.1:13830852-13830871 | None:intergenic | 35.0% |
! | TAACACCAGTATTTTTCCTG+AGG | + | chr2.1:13833193-13833212 | MS.gene35839:CDS | 35.0% |
! | TATGCGTTGACAGGTTATAT+TGG | + | chr2.1:13831583-13831602 | MS.gene35839:intron | 35.0% |
! | TGTTTGCTAGGGGTAAATAT+GGG | + | chr2.1:13834081-13834100 | MS.gene35839:CDS | 35.0% |
! | TTCTGGTGAATCATCACTTT+TGG | - | chr2.1:13831012-13831031 | None:intergenic | 35.0% |
! | TTGTTTGCTAGGGGTAAATA+TGG | + | chr2.1:13834080-13834099 | MS.gene35839:CDS | 35.0% |
! | TTTCACACTGTCTTATTCCA+GGG | + | chr2.1:13833615-13833634 | MS.gene35839:intron | 35.0% |
! | TTTTTGCAGTACATGATAGG+GGG | + | chr2.1:13832092-13832111 | MS.gene35839:intron | 35.0% |
!! | ACATTCAATTTCTAGTGCCA+AGG | + | chr2.1:13833226-13833245 | MS.gene35839:intron | 35.0% |
!! | CAAGTTGGTTAAGCTTAGTT+AGG | - | chr2.1:13833406-13833425 | None:intergenic | 35.0% |
!! | CTTATTGTTGGCTTACCAAT+TGG | + | chr2.1:13833111-13833130 | MS.gene35839:CDS | 35.0% |
!! | GCTTGTTATGTTTCTGATGA+TGG | + | chr2.1:13830864-13830883 | MS.gene35839:CDS | 35.0% |
!! | GGATATGTTTTGTTAACAGC+AGG | - | chr2.1:13830151-13830170 | None:intergenic | 35.0% |
!! | TATTGTTGGCTTACCAATTG+GGG | + | chr2.1:13833113-13833132 | MS.gene35839:CDS | 35.0% |
!! | TTGTGAAGGTGTTGTTGATA+CGG | - | chr2.1:13830051-13830070 | None:intergenic | 35.0% |
!! | TTTTCACACTGTCTTATTCC+AGG | + | chr2.1:13833614-13833633 | MS.gene35839:intron | 35.0% |
!!! | CGAGTTTTTTAGTATCACAC+AGG | - | chr2.1:13832526-13832545 | None:intergenic | 35.0% |
!!! | TCGTCTTTGTGTTTTTTTGC+AGG | + | chr2.1:13831183-13831202 | MS.gene35839:intron | 35.0% |
AATGATCGACGAAGTCACTT+TGG | - | chr2.1:13830507-13830526 | None:intergenic | 40.0% | |
AATTTGCAGACAAGAGTCTC+TGG | + | chr2.1:13831788-13831807 | MS.gene35839:intron | 40.0% | |
ACAACACCTTCACAATTCCA+TGG | + | chr2.1:13830056-13830075 | MS.gene35839:CDS | 40.0% | |
AGCAAGCATTCTCCTGTTAT+GGG | + | chr2.1:13833050-13833069 | MS.gene35839:CDS | 40.0% | |
AGTGACAGATAGAGATAGAG+CGG | + | chr2.1:13832344-13832363 | MS.gene35839:intron | 40.0% | |
ATTGGAGATGATGCAAATGC+TGG | + | chr2.1:13833870-13833889 | MS.gene35839:CDS | 40.0% | |
CAAAAGGAAAGTCCAACTTC+TGG | + | chr2.1:13833843-13833862 | MS.gene35839:CDS | 40.0% | |
CAACAAAAGAGATGGTCTTC+AGG | + | chr2.1:13833008-13833027 | MS.gene35839:CDS | 40.0% | |
CATGAGAAAGCAAGAAACCA+TGG | - | chr2.1:13830076-13830095 | None:intergenic | 40.0% | |
CGTTGACAGGTTATATTGGA+TGG | + | chr2.1:13831587-13831606 | MS.gene35839:intron | 40.0% | |
CTGCAAATTCTCCCTCAAAT+TGG | - | chr2.1:13831267-13831286 | None:intergenic | 40.0% | |
GAATGAGTCTCGGAAACATA+AGG | - | chr2.1:13831751-13831770 | None:intergenic | 40.0% | |
GCAAACAACCCTTTCAGAAA+TGG | - | chr2.1:13834068-13834087 | None:intergenic | 40.0% | |
GTACCTAGTTAATTGCAAGC+TGG | + | chr2.1:13833344-13833363 | MS.gene35839:intron | 40.0% | |
GTCACAAACAAATCCACACA+TGG | - | chr2.1:13830756-13830775 | None:intergenic | 40.0% | |
GTGCAATTAGAAGCTCATAG+TGG | + | chr2.1:13833984-13834003 | MS.gene35839:CDS | 40.0% | |
GTGTTCAATGTGATGATTGG+TGG | - | chr2.1:13830801-13830820 | None:intergenic | 40.0% | |
GTGTTTGATCCTCCATAGTA+TGG | - | chr2.1:13832137-13832156 | None:intergenic | 40.0% | |
GTTAACCATGTCCAAATTGG+TGG | + | chr2.1:13830578-13830597 | MS.gene35839:intron | 40.0% | |
TACCAACACATTCATAGCTC+CGG | - | chr2.1:13831687-13831706 | None:intergenic | 40.0% | |
TAGCAAGCATTCTCCTGTTA+TGG | + | chr2.1:13833049-13833068 | MS.gene35839:CDS | 40.0% | |
TATCCCTAAGAGCTTAAGCA+TGG | - | chr2.1:13833799-13833818 | None:intergenic | 40.0% | |
TCTCCAATAACACCAGAAGT+TGG | - | chr2.1:13833858-13833877 | None:intergenic | 40.0% | |
TGTTACTGGCCATTTCTGAA+AGG | + | chr2.1:13834056-13834075 | MS.gene35839:CDS | 40.0% | |
TTACATACCGTTGAAGGAGA+CGG | - | chr2.1:13830177-13830196 | None:intergenic | 40.0% | |
TTGGTGGAACAATCAGAGAA+TGG | + | chr2.1:13833728-13833747 | MS.gene35839:CDS | 40.0% | |
! | CACTTACATTATGCGTTGAC+AGG | + | chr2.1:13831574-13831593 | MS.gene35839:intron | 40.0% |
! | CATACAGAGGGAGATTTTCT+TGG | - | chr2.1:13829949-13829968 | None:intergenic | 40.0% |
! | CTGAAGACCATCTCTTTTGT+TGG | - | chr2.1:13833010-13833029 | None:intergenic | 40.0% |
! | GAACACTGTTTTGTCTCTGT+TGG | + | chr2.1:13830815-13830834 | MS.gene35839:CDS | 40.0% |
! | GACTTCGTCGATCATTGATT+TGG | + | chr2.1:13830511-13830530 | MS.gene35839:intron | 40.0% |
! | GGAATAAAAGACGACCCTTT+TGG | + | chr2.1:13831962-13831981 | MS.gene35839:CDS | 40.0% |
! | GGTAAAATCCAATTTAGGGC+TGG | + | chr2.1:13833083-13833102 | MS.gene35839:CDS | 40.0% |
! | GTTACTGGCCATTTCTGAAA+GGG | + | chr2.1:13834057-13834076 | MS.gene35839:CDS | 40.0% |
! | TCTGAAAGGGTTGTTTGCTA+GGG | + | chr2.1:13834070-13834089 | MS.gene35839:CDS | 40.0% |
! | TTCTGAAAGGGTTGTTTGCT+AGG | + | chr2.1:13834069-13834088 | MS.gene35839:CDS | 40.0% |
!! | ACGACCCTTTTGGAAATCAA+TGG | + | chr2.1:13831972-13831991 | MS.gene35839:CDS | 40.0% |
!! | AGTCCAACTTCTGGTGTTAT+TGG | + | chr2.1:13833852-13833871 | MS.gene35839:CDS | 40.0% |
!! | ATGATTGGTGGTTCTAGAAC+AGG | - | chr2.1:13830789-13830808 | None:intergenic | 40.0% |
!! | CCACCCATTGATTTCCAAAA+GGG | - | chr2.1:13831979-13831998 | None:intergenic | 40.0% |
!! | CGACCCTTTTGGAAATCAAT+GGG | + | chr2.1:13831973-13831992 | MS.gene35839:CDS | 40.0% |
!!! | GGGTCACATCTTCCATTTTT+TGG | - | chr2.1:13831228-13831247 | None:intergenic | 40.0% |
!!! | TTTTGAAACTTCAGATGGGC+TGG | + | chr2.1:13832850-13832869 | MS.gene35839:intron | 40.0% |
AAGACAAGCCAGCCCTAAAT+TGG | - | chr2.1:13833094-13833113 | None:intergenic | 45.0% | |
AGTGCCATGCTTAAGCTCTT+AGG | + | chr2.1:13833792-13833811 | MS.gene35839:CDS | 45.0% | |
ATACGCTTCGATCGTGATCA+TGG | - | chr2.1:13830478-13830497 | None:intergenic | 45.0% | |
ATCCAAACCGTCTCCTTCAA+CGG | + | chr2.1:13830167-13830186 | MS.gene35839:CDS | 45.0% | |
CTTCAAGGACCATACTATGG+AGG | + | chr2.1:13832125-13832144 | MS.gene35839:CDS | 45.0% | |
GAGATGATGCAAATGCTGGT+AGG | + | chr2.1:13833874-13833893 | MS.gene35839:CDS | 45.0% | |
GGACTTCAAGGACCATACTA+TGG | + | chr2.1:13832122-13832141 | MS.gene35839:CDS | 45.0% | |
GTGCCATGCTTAAGCTCTTA+GGG | + | chr2.1:13833793-13833812 | MS.gene35839:CDS | 45.0% | |
GTTAACAGCAGGACTCCATT+TGG | - | chr2.1:13830140-13830159 | None:intergenic | 45.0% | |
GTTGAACGTAGACTGTGACA+TGG | + | chr2.1:13831835-13831854 | MS.gene35839:CDS | 45.0% | |
TTGTGCCAACCACAAAAGCT+GGG | - | chr2.1:13833917-13833936 | None:intergenic | 45.0% | |
! | AGTGGGAAAGAGTGTGGAAT+AGG | + | chr2.1:13834002-13834021 | MS.gene35839:CDS | 45.0% |
! | CAGAGGGAGATTTTCTTGGT+TGG | - | chr2.1:13829945-13829964 | None:intergenic | 45.0% |
! | CTGAAAGGGTTGTTTGCTAG+GGG | + | chr2.1:13834071-13834090 | MS.gene35839:CDS | 45.0% |
! | TAGCACTTGTTGGGGTAAAC+AGG | + | chr2.1:13832729-13832748 | MS.gene35839:CDS | 45.0% |
!! | AGATAGAGCGGTGTCACATA+TGG | + | chr2.1:13832356-13832375 | MS.gene35839:intron | 45.0% |
!! | CCCTTTTGGAAATCAATGGG+TGG | + | chr2.1:13831976-13831995 | MS.gene35839:CDS | 45.0% |
!! | CTTCAGATGGGCTGGTTATA+TGG | + | chr2.1:13832858-13832877 | MS.gene35839:intron | 45.0% |
!! | GCCACCCATTGATTTCCAAA+AGG | - | chr2.1:13831980-13831999 | None:intergenic | 45.0% |
AGCCGGAGCTATGAATGTGT+TGG | + | chr2.1:13831682-13831701 | MS.gene35839:CDS | 50.0% | |
AGTACAGGAGCTTCCATGTG+TGG | + | chr2.1:13830740-13830759 | MS.gene35839:CDS | 50.0% | |
CCTGTTATGGGTACCCTCTT+TGG | + | chr2.1:13833062-13833081 | MS.gene35839:CDS | 50.0% | |
GCAGTACATGATAGGGGGTA+TGG | + | chr2.1:13832097-13832116 | MS.gene35839:intron | 50.0% | |
GGAAGCTCCTGTACTCTATG+AGG | - | chr2.1:13830735-13830754 | None:intergenic | 50.0% | |
GTTGTGCCAACCACAAAAGC+TGG | - | chr2.1:13833918-13833937 | None:intergenic | 50.0% | |
TACCAATTGGGGTCTGCGTT+CGG | + | chr2.1:13833124-13833143 | MS.gene35839:CDS | 50.0% | |
TACCGTTGAAGGAGACGGTT+TGG | - | chr2.1:13830172-13830191 | None:intergenic | 50.0% | |
TCAATGGGTGGCTGCATTTG+AGG | + | chr2.1:13831988-13832007 | MS.gene35839:CDS | 50.0% | |
TGTGCCAACCACAAAAGCTG+GGG | - | chr2.1:13833916-13833935 | None:intergenic | 50.0% | |
! | ACTGTCTTATTCCAGGGAGC+TGG | + | chr2.1:13833621-13833640 | MS.gene35839:intron | 50.0% |
! | CTGTCTTATTCCAGGGAGCT+GGG | + | chr2.1:13833622-13833641 | MS.gene35839:intron | 50.0% |
! | GCTCATAGTGGGAAAGAGTG+TGG | + | chr2.1:13833996-13834015 | MS.gene35839:CDS | 50.0% |
! | TACATGATAGGGGGTATGGC+AGG | + | chr2.1:13832101-13832120 | MS.gene35839:CDS | 50.0% |
! | TGATGAGTCCCCAGCTTTTG+TGG | + | chr2.1:13833905-13833924 | MS.gene35839:CDS | 50.0% |
!! | CCAAAGAGGGTACCCATAAC+AGG | - | chr2.1:13833065-13833084 | None:intergenic | 50.0% |
!! | GGGCTGGCTTGTCTTATTGT+TGG | + | chr2.1:13833099-13833118 | MS.gene35839:CDS | 50.0% |
TAATCCATAGCCCAGCTCCC+TGG | - | chr2.1:13833635-13833654 | None:intergenic | 55.0% | |
TATTCCAGGGAGCTGGGCTA+TGG | + | chr2.1:13833628-13833647 | MS.gene35839:intron | 55.0% | |
! | GAGTCCCCAGCTTTTGTGGT+TGG | + | chr2.1:13833909-13833928 | MS.gene35839:CDS | 55.0% |
GACCGAACGCAGACCCCAAT+TGG | - | chr2.1:13833129-13833148 | None:intergenic | 60.0% | |
GCACAGCCTGTAAACGCGGT+TGG | - | chr2.1:13832960-13832979 | None:intergenic | 60.0% | |
GCGTTTACAGGCTGTGCTCC+CGG | + | chr2.1:13832963-13832982 | MS.gene35839:CDS | 60.0% | |
TTTACAGGCTGTGCTCCCGG+AGG | + | chr2.1:13832966-13832985 | MS.gene35839:CDS | 60.0% | |
! | CCTGTAAACGCGGTTGGCTC+GGG | - | chr2.1:13832954-13832973 | None:intergenic | 60.0% |
! | GCCTGTAAACGCGGTTGGCT+CGG | - | chr2.1:13832955-13832974 | None:intergenic | 60.0% |
! | GGGAGCACAGCCTGTAAACG+CGG | - | chr2.1:13832964-13832983 | None:intergenic | 60.0% |
! | GGGGGTATGGCAGGACTTCA+AGG | + | chr2.1:13832110-13832129 | MS.gene35839:CDS | 60.0% |
CCCGAGCCAACCGCGTTTAC+AGG | + | chr2.1:13832951-13832970 | MS.gene35839:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 13829938 | 13834342 | 13829938 | ID=MS.gene35839 |
chr2.1 | mRNA | 13829938 | 13834342 | 13829938 | ID=MS.gene35839.t1;Parent=MS.gene35839 |
chr2.1 | exon | 13829938 | 13830188 | 13829938 | ID=MS.gene35839.t1.exon1;Parent=MS.gene35839.t1 |
chr2.1 | CDS | 13829938 | 13830188 | 13829938 | ID=cds.MS.gene35839.t1;Parent=MS.gene35839.t1 |
chr2.1 | exon | 13830740 | 13831058 | 13830740 | ID=MS.gene35839.t1.exon2;Parent=MS.gene35839.t1 |
chr2.1 | CDS | 13830740 | 13831058 | 13830740 | ID=cds.MS.gene35839.t1;Parent=MS.gene35839.t1 |
chr2.1 | exon | 13831205 | 13831330 | 13831205 | ID=MS.gene35839.t1.exon3;Parent=MS.gene35839.t1 |
chr2.1 | CDS | 13831205 | 13831330 | 13831205 | ID=cds.MS.gene35839.t1;Parent=MS.gene35839.t1 |
chr2.1 | exon | 13831596 | 13831703 | 13831596 | ID=MS.gene35839.t1.exon4;Parent=MS.gene35839.t1 |
chr2.1 | CDS | 13831596 | 13831703 | 13831596 | ID=cds.MS.gene35839.t1;Parent=MS.gene35839.t1 |
chr2.1 | exon | 13831797 | 13832009 | 13831797 | ID=MS.gene35839.t1.exon5;Parent=MS.gene35839.t1 |
chr2.1 | CDS | 13831797 | 13832009 | 13831797 | ID=cds.MS.gene35839.t1;Parent=MS.gene35839.t1 |
chr2.1 | exon | 13832101 | 13832218 | 13832101 | ID=MS.gene35839.t1.exon6;Parent=MS.gene35839.t1 |
chr2.1 | CDS | 13832101 | 13832218 | 13832101 | ID=cds.MS.gene35839.t1;Parent=MS.gene35839.t1 |
chr2.1 | exon | 13832566 | 13832750 | 13832566 | ID=MS.gene35839.t1.exon7;Parent=MS.gene35839.t1 |
chr2.1 | CDS | 13832566 | 13832750 | 13832566 | ID=cds.MS.gene35839.t1;Parent=MS.gene35839.t1 |
chr2.1 | exon | 13832864 | 13833214 | 13832864 | ID=MS.gene35839.t1.exon8;Parent=MS.gene35839.t1 |
chr2.1 | CDS | 13832864 | 13833214 | 13832864 | ID=cds.MS.gene35839.t1;Parent=MS.gene35839.t1 |
chr2.1 | exon | 13833636 | 13834126 | 13833636 | ID=MS.gene35839.t1.exon9;Parent=MS.gene35839.t1 |
chr2.1 | CDS | 13833636 | 13834126 | 13833636 | ID=cds.MS.gene35839.t1;Parent=MS.gene35839.t1 |
chr2.1 | exon | 13834321 | 13834342 | 13834321 | ID=MS.gene35839.t1.exon10;Parent=MS.gene35839.t1 |
chr2.1 | CDS | 13834321 | 13834342 | 13834321 | ID=cds.MS.gene35839.t1;Parent=MS.gene35839.t1 |
Gene Sequence |
Protein sequence |