Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059304.t1 | XP_003596942.1 | 95.1 | 634 | 31 | 0 | 1 | 634 | 25 | 658 | 0.00E+00 | 1250 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059304.t1 | Q339N5 | 50.4 | 639 | 291 | 10 | 2 | 630 | 26 | 648 | 1.9e-169 | 597.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059304.t1 | G7IRJ1 | 95.1 | 634 | 31 | 0 | 1 | 634 | 25 | 658 | 0.0e+00 | 1250.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049251 | MS.gene059304 | 0.815186 | 1.05E-51 | -1.69E-46 |
MS.gene051439 | MS.gene059304 | 0.818504 | 1.89E-52 | -1.69E-46 |
MS.gene052129 | MS.gene059304 | 0.818124 | 2.31E-52 | -1.69E-46 |
MS.gene053173 | MS.gene059304 | 0.81019 | 1.30E-50 | -1.69E-46 |
MS.gene054551 | MS.gene059304 | 0.801554 | 8.53E-49 | -1.69E-46 |
MS.gene05732 | MS.gene059304 | 0.814782 | 1.29E-51 | -1.69E-46 |
MS.gene059304 | MS.gene061044 | 0.820605 | 6.28E-53 | -1.69E-46 |
MS.gene059304 | MS.gene061683 | 0.840921 | 6.50E-58 | -1.69E-46 |
MS.gene059304 | MS.gene062638 | 0.836365 | 9.77E-57 | -1.69E-46 |
MS.gene059304 | MS.gene063148 | 0.811652 | 6.29E-51 | -1.69E-46 |
MS.gene059304 | MS.gene06375 | 0.812667 | 3.78E-51 | -1.69E-46 |
MS.gene059304 | MS.gene065427 | 0.815181 | 1.05E-51 | -1.69E-46 |
MS.gene059304 | MS.gene066358 | 0.809946 | 1.47E-50 | -1.69E-46 |
MS.gene059304 | MS.gene066359 | 0.839777 | 1.29E-57 | -1.69E-46 |
MS.gene059304 | MS.gene068585 | 0.808972 | 2.38E-50 | -1.69E-46 |
MS.gene059304 | MS.gene069120 | 0.815845 | 7.50E-52 | -1.69E-46 |
MS.gene059304 | MS.gene069771 | 0.820375 | 7.09E-53 | -1.69E-46 |
MS.gene059304 | MS.gene071307 | -0.804597 | 2.00E-49 | -1.69E-46 |
MS.gene059304 | MS.gene071308 | -0.800411 | 1.46E-48 | -1.69E-46 |
MS.gene059304 | MS.gene074380 | -0.808177 | 3.52E-50 | -1.69E-46 |
MS.gene059304 | MS.gene08407 | 0.809361 | 1.97E-50 | -1.69E-46 |
MS.gene059304 | MS.gene09072 | 0.802123 | 6.51E-49 | -1.69E-46 |
MS.gene059304 | MS.gene20960 | 0.840885 | 6.64E-58 | -1.69E-46 |
MS.gene059304 | MS.gene21086 | 0.82357 | 1.29E-53 | -1.69E-46 |
MS.gene059304 | MS.gene21274 | 0.807623 | 4.62E-50 | -1.69E-46 |
MS.gene059304 | MS.gene22939 | 0.853799 | 1.88E-61 | -1.69E-46 |
MS.gene059304 | MS.gene26109 | 0.801503 | 8.73E-49 | -1.69E-46 |
MS.gene059304 | MS.gene26475 | 0.802899 | 4.51E-49 | -1.69E-46 |
MS.gene059304 | MS.gene28603 | 0.803265 | 3.79E-49 | -1.69E-46 |
MS.gene059304 | MS.gene29927 | -0.804265 | 2.35E-49 | -1.69E-46 |
MS.gene059304 | MS.gene30247 | 0.825789 | 3.87E-54 | -1.69E-46 |
MS.gene059304 | MS.gene34650 | 0.811184 | 7.95E-51 | -1.69E-46 |
MS.gene059304 | MS.gene35208 | 0.814804 | 1.28E-51 | -1.69E-46 |
MS.gene059304 | MS.gene35711 | 0.95843 | 2.40E-116 | -1.69E-46 |
MS.gene059304 | MS.gene35795 | 0.802313 | 5.95E-49 | -1.69E-46 |
MS.gene059304 | MS.gene38118 | 0.804092 | 2.55E-49 | -1.69E-46 |
MS.gene059304 | MS.gene38724 | 0.805826 | 1.11E-49 | -1.69E-46 |
MS.gene059304 | MS.gene45482 | 0.810831 | 9.48E-51 | -1.69E-46 |
MS.gene059304 | MS.gene45607 | -0.803767 | 2.98E-49 | -1.69E-46 |
MS.gene059304 | MS.gene50576 | 0.811954 | 5.41E-51 | -1.69E-46 |
MS.gene059304 | MS.gene55081 | 0.818102 | 2.34E-52 | -1.69E-46 |
MS.gene059304 | MS.gene60177 | -0.807847 | 4.14E-50 | -1.69E-46 |
MS.gene059304 | MS.gene61144 | -0.808297 | 3.32E-50 | -1.69E-46 |
MS.gene059304 | MS.gene62680 | 0.825674 | 4.12E-54 | -1.69E-46 |
MS.gene059304 | MS.gene65431 | 0.824682 | 7.07E-54 | -1.69E-46 |
MS.gene059304 | MS.gene68024 | 0.802198 | 6.29E-49 | -1.69E-46 |
MS.gene059304 | MS.gene68203 | 0.802807 | 4.71E-49 | -1.69E-46 |
MS.gene059304 | MS.gene68849 | 0.803239 | 3.83E-49 | -1.69E-46 |
MS.gene059304 | MS.gene68946 | 0.804416 | 2.18E-49 | -1.69E-46 |
MS.gene059304 | MS.gene71379 | 0.81249 | 4.13E-51 | -1.69E-46 |
MS.gene059304 | MS.gene72278 | 0.819623 | 1.05E-52 | -1.69E-46 |
MS.gene059304 | MS.gene75579 | 0.805647 | 1.21E-49 | -1.69E-46 |
MS.gene059304 | MS.gene77492 | 0.813727 | 2.21E-51 | -1.69E-46 |
MS.gene059304 | MS.gene78250 | 0.822959 | 1.79E-53 | -1.69E-46 |
MS.gene059304 | MS.gene82356 | -0.813291 | 2.76E-51 | -1.69E-46 |
MS.gene059304 | MS.gene83291 | 0.804854 | 1.77E-49 | -1.69E-46 |
MS.gene059304 | MS.gene83292 | 0.829759 | 4.30E-55 | -1.69E-46 |
MS.gene059304 | MS.gene89653 | 0.818052 | 2.40E-52 | -1.69E-46 |
MS.gene059304 | MS.gene90819 | 0.804935 | 1.70E-49 | -1.69E-46 |
MS.gene059304 | MS.gene90966 | 0.806957 | 6.39E-50 | -1.69E-46 |
MS.gene059304 | MS.gene95132 | 0.817245 | 3.65E-52 | -1.69E-46 |
MS.gene059304 | MS.gene96299 | 0.805415 | 1.35E-49 | -1.69E-46 |
MS.gene059304 | MS.gene97258 | 0.801689 | 8.00E-49 | -1.69E-46 |
MS.gene059304 | MS.gene97259 | 0.807467 | 4.98E-50 | -1.69E-46 |
MS.gene059304 | MS.gene99603 | 0.801772 | 7.69E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene059304 | MS.gene061307 | PPI |
MS.gene059304 | MS.gene35708 | PPI |
MS.gene66611 | MS.gene059304 | PPI |
MS.gene059304 | MS.gene059306 | PPI |
MS.gene059304 | MS.gene034349 | PPI |
MS.gene61615 | MS.gene059304 | PPI |
MS.gene059304 | MS.gene35839 | PPI |
MS.gene059304 | MS.gene35707 | PPI |
MS.gene059304 | MS.gene66611 | PPI |
MS.gene059304 | MS.gene059307 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059304.t1 | MTR_2g087900 | 95.110 | 634 | 31 | 0 | 1 | 634 | 25 | 658 | 0.0 | 1261 |
MS.gene059304.t1 | MTR_2g087900 | 95.811 | 549 | 23 | 0 | 1 | 549 | 25 | 573 | 0.0 | 1100 |
MS.gene059304.t1 | MTR_2g087950 | 71.680 | 625 | 158 | 9 | 1 | 620 | 23 | 633 | 0.0 | 874 |
MS.gene059304.t1 | MTR_2g087900 | 91.126 | 462 | 38 | 2 | 1 | 460 | 25 | 485 | 0.0 | 859 |
MS.gene059304.t1 | MTR_4g050000 | 63.391 | 631 | 212 | 8 | 1 | 627 | 23 | 638 | 0.0 | 793 |
MS.gene059304.t1 | MTR_2g087960 | 58.533 | 627 | 246 | 6 | 15 | 637 | 40 | 656 | 0.0 | 749 |
MS.gene059304.t1 | MTR_2g087980 | 58.466 | 626 | 241 | 8 | 15 | 637 | 37 | 646 | 0.0 | 732 |
MS.gene059304.t1 | MTR_2g087960 | 60.556 | 540 | 200 | 5 | 17 | 552 | 42 | 572 | 0.0 | 672 |
MS.gene059304.t1 | MTR_2g087900 | 95.385 | 325 | 15 | 0 | 1 | 325 | 25 | 349 | 0.0 | 643 |
MS.gene059304.t1 | MTR_2g087900 | 90.789 | 228 | 17 | 1 | 1 | 224 | 25 | 252 | 9.54e-144 | 419 |
MS.gene059304.t1 | MTR_3g030040 | 35.871 | 683 | 371 | 9 | 4 | 620 | 276 | 957 | 9.18e-139 | 432 |
MS.gene059304.t1 | MTR_8g092590 | 36.750 | 683 | 366 | 9 | 4 | 620 | 294 | 976 | 1.10e-137 | 430 |
MS.gene059304.t1 | MTR_8g037260 | 35.355 | 676 | 370 | 10 | 11 | 620 | 283 | 957 | 1.46e-135 | 424 |
MS.gene059304.t1 | MTR_8g063270 | 36.294 | 653 | 374 | 12 | 6 | 620 | 7 | 655 | 1.03e-134 | 414 |
MS.gene059304.t1 | MTR_4g130510 | 36.405 | 662 | 373 | 10 | 6 | 620 | 258 | 918 | 1.57e-134 | 420 |
MS.gene059304.t1 | MTR_8g086600 | 35.460 | 674 | 373 | 12 | 4 | 620 | 201 | 869 | 1.92e-133 | 416 |
MS.gene059304.t1 | MTR_2g016630 | 35.111 | 675 | 377 | 10 | 4 | 620 | 186 | 857 | 2.73e-133 | 416 |
MS.gene059304.t1 | MTR_8g063270 | 36.294 | 653 | 374 | 12 | 6 | 620 | 212 | 860 | 1.41e-132 | 414 |
MS.gene059304.t1 | MTR_1g098550 | 35.819 | 684 | 370 | 11 | 4 | 620 | 296 | 977 | 9.95e-132 | 414 |
MS.gene059304.t1 | MTR_1g098550 | 35.819 | 684 | 370 | 11 | 4 | 620 | 292 | 973 | 1.02e-131 | 414 |
MS.gene059304.t1 | MTR_7g106680 | 34.706 | 680 | 379 | 10 | 4 | 620 | 234 | 911 | 1.43e-131 | 412 |
MS.gene059304.t1 | MTR_3g107520 | 34.315 | 679 | 381 | 9 | 6 | 620 | 288 | 965 | 1.28e-129 | 409 |
MS.gene059304.t1 | MTR_3g007770 | 35.226 | 687 | 371 | 13 | 4 | 620 | 243 | 925 | 2.01e-129 | 407 |
MS.gene059304.t1 | MTR_3g060240 | 36.758 | 623 | 341 | 11 | 28 | 637 | 52 | 634 | 3.02e-129 | 398 |
MS.gene059304.t1 | MTR_4g130510 | 34.626 | 696 | 373 | 11 | 6 | 620 | 258 | 952 | 1.75e-127 | 402 |
MS.gene059304.t1 | MTR_2g035780 | 34.278 | 706 | 367 | 14 | 4 | 620 | 227 | 924 | 2.21e-127 | 402 |
MS.gene059304.t1 | MTR_4g130510 | 37.138 | 587 | 324 | 8 | 6 | 547 | 258 | 844 | 7.14e-126 | 393 |
MS.gene059304.t1 | MTR_3g060220 | 35.885 | 627 | 341 | 13 | 28 | 637 | 52 | 634 | 4.03e-125 | 387 |
MS.gene059304.t1 | MTR_3g060220 | 36.045 | 627 | 339 | 14 | 28 | 637 | 52 | 633 | 6.33e-125 | 387 |
MS.gene059304.t1 | MTR_1g069605 | 33.991 | 659 | 391 | 10 | 4 | 620 | 116 | 772 | 4.13e-124 | 389 |
MS.gene059304.t1 | MTR_3g060280 | 34.641 | 612 | 344 | 10 | 33 | 627 | 68 | 640 | 4.49e-117 | 367 |
MS.gene059304.t1 | MTR_4g088225 | 32.907 | 626 | 379 | 14 | 22 | 637 | 54 | 648 | 1.27e-108 | 344 |
MS.gene059304.t1 | MTR_4g088225 | 32.907 | 626 | 379 | 14 | 22 | 637 | 54 | 648 | 2.50e-108 | 343 |
MS.gene059304.t1 | MTR_3g060280 | 34.962 | 532 | 295 | 8 | 28 | 547 | 63 | 555 | 1.19e-106 | 335 |
MS.gene059304.t1 | MTR_2g037830 | 33.440 | 625 | 365 | 14 | 6 | 620 | 26 | 609 | 1.23e-106 | 338 |
MS.gene059304.t1 | MTR_3g060280 | 34.897 | 533 | 296 | 8 | 28 | 548 | 63 | 556 | 1.30e-106 | 335 |
MS.gene059304.t1 | MTR_5g029190 | 31.507 | 730 | 382 | 16 | 6 | 620 | 275 | 1001 | 2.31e-105 | 345 |
MS.gene059304.t1 | MTR_1g073740 | 32.670 | 603 | 369 | 10 | 25 | 620 | 58 | 630 | 5.26e-105 | 335 |
MS.gene059304.t1 | MTR_0011s0020 | 32.686 | 618 | 373 | 15 | 9 | 620 | 29 | 609 | 1.15e-103 | 330 |
MS.gene059304.t1 | MTR_3g450800 | 33.109 | 595 | 355 | 13 | 32 | 620 | 3 | 560 | 6.97e-103 | 327 |
MS.gene059304.t1 | MTR_1g039480 | 30.488 | 738 | 388 | 16 | 3 | 620 | 279 | 1011 | 4.74e-100 | 330 |
MS.gene059304.t1 | MTR_4g077910 | 30.191 | 732 | 393 | 18 | 4 | 620 | 294 | 1022 | 1.47e-97 | 324 |
MS.gene059304.t1 | MTR_1g039445 | 29.452 | 730 | 392 | 15 | 3 | 620 | 265 | 983 | 2.87e-97 | 322 |
MS.gene059304.t1 | MTR_2g438220 | 30.441 | 749 | 397 | 18 | 4 | 638 | 180 | 918 | 3.53e-96 | 318 |
MS.gene059304.t1 | MTR_7g109200 | 29.960 | 741 | 394 | 17 | 4 | 624 | 318 | 1053 | 7.26e-95 | 317 |
MS.gene059304.t1 | MTR_3g005560 | 31.925 | 639 | 376 | 17 | 6 | 627 | 26 | 622 | 8.39e-95 | 307 |
MS.gene059304.t1 | MTR_4g130510 | 36.306 | 471 | 256 | 7 | 6 | 432 | 258 | 728 | 2.45e-89 | 293 |
MS.gene059304.t1 | MTR_2g037830 | 34.855 | 482 | 270 | 10 | 6 | 480 | 26 | 470 | 2.64e-89 | 288 |
MS.gene059304.t1 | MTR_3g005560 | 32.971 | 552 | 321 | 13 | 6 | 548 | 26 | 537 | 1.40e-88 | 287 |
MS.gene059304.t1 | MTR_7g116230 | 31.525 | 590 | 303 | 15 | 4 | 516 | 150 | 715 | 4.53e-85 | 285 |
MS.gene059304.t1 | MTR_3g060280 | 35.492 | 417 | 219 | 7 | 28 | 432 | 63 | 441 | 5.34e-83 | 269 |
MS.gene059304.t1 | MTR_3g005560 | 34.483 | 435 | 237 | 12 | 6 | 431 | 26 | 421 | 6.29e-70 | 234 |
MS.gene059304.t1 | MTR_3g091270 | 31.422 | 436 | 205 | 11 | 68 | 453 | 105 | 496 | 4.17e-55 | 196 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059304.t1 | AT2G32540 | 48.576 | 597 | 291 | 9 | 29 | 620 | 53 | 638 | 0.0 | 562 |
MS.gene059304.t1 | AT2G32530 | 46.093 | 627 | 318 | 9 | 1 | 620 | 25 | 638 | 0.0 | 557 |
MS.gene059304.t1 | AT4G15320 | 45.847 | 626 | 318 | 13 | 1 | 620 | 25 | 635 | 0.0 | 543 |
MS.gene059304.t1 | AT4G15320 | 45.847 | 626 | 318 | 13 | 1 | 620 | 25 | 635 | 0.0 | 542 |
MS.gene059304.t1 | AT2G32620 | 45.382 | 628 | 325 | 11 | 28 | 650 | 52 | 666 | 0.0 | 535 |
MS.gene059304.t1 | AT4G15320 | 44.774 | 641 | 318 | 14 | 1 | 620 | 25 | 650 | 0.0 | 534 |
MS.gene059304.t1 | AT4G15290 | 46.244 | 599 | 302 | 12 | 28 | 620 | 52 | 636 | 1.19e-178 | 526 |
MS.gene059304.t1 | AT2G32620 | 47.764 | 559 | 275 | 10 | 28 | 581 | 52 | 598 | 1.61e-175 | 513 |
MS.gene059304.t1 | AT2G32610 | 44.496 | 645 | 335 | 12 | 4 | 636 | 27 | 660 | 3.00e-175 | 518 |
MS.gene059304.t1 | AT4G15320 | 42.113 | 672 | 308 | 15 | 1 | 620 | 25 | 667 | 5.97e-170 | 505 |
MS.gene059304.t1 | AT2G32620 | 44.923 | 581 | 304 | 10 | 75 | 650 | 1 | 570 | 2.77e-165 | 489 |
MS.gene059304.t1 | AT4G15320 | 39.580 | 715 | 308 | 16 | 1 | 620 | 25 | 710 | 5.59e-161 | 483 |
MS.gene059304.t1 | AT2G32620 | 50.000 | 474 | 222 | 8 | 28 | 496 | 52 | 515 | 1.40e-157 | 465 |
MS.gene059304.t1 | AT5G09870 | 37.042 | 683 | 362 | 11 | 4 | 620 | 269 | 949 | 4.08e-142 | 441 |
MS.gene059304.t1 | AT5G05170 | 36.364 | 682 | 368 | 10 | 4 | 620 | 264 | 944 | 3.95e-141 | 438 |
MS.gene059304.t1 | AT5G64740 | 36.735 | 686 | 363 | 11 | 4 | 620 | 281 | 964 | 5.18e-140 | 436 |
MS.gene059304.t1 | AT4G18780 | 35.852 | 675 | 375 | 10 | 4 | 620 | 189 | 863 | 1.46e-137 | 427 |
MS.gene059304.t1 | AT5G17420 | 36.858 | 662 | 371 | 10 | 6 | 620 | 245 | 906 | 1.63e-136 | 425 |
MS.gene059304.t1 | AT4G39350 | 36.070 | 682 | 367 | 10 | 6 | 620 | 284 | 963 | 5.43e-135 | 423 |
MS.gene059304.t1 | AT4G32410 | 34.802 | 681 | 379 | 9 | 4 | 620 | 280 | 959 | 1.25e-134 | 422 |
MS.gene059304.t1 | AT2G21770 | 35.536 | 681 | 371 | 11 | 6 | 620 | 289 | 967 | 3.30e-132 | 416 |
MS.gene059304.t1 | AT2G25540 | 35.389 | 681 | 375 | 13 | 4 | 620 | 260 | 939 | 1.25e-129 | 408 |
MS.gene059304.t1 | AT1G55850 | 38.833 | 600 | 311 | 12 | 28 | 618 | 67 | 619 | 4.05e-127 | 392 |
MS.gene059304.t1 | AT4G24010 | 36.661 | 611 | 339 | 14 | 21 | 620 | 52 | 625 | 3.06e-119 | 373 |
MS.gene059304.t1 | AT4G24000 | 36.422 | 626 | 344 | 18 | 15 | 627 | 43 | 627 | 1.59e-116 | 365 |
MS.gene059304.t1 | AT4G23990 | 36.379 | 591 | 329 | 14 | 41 | 620 | 90 | 644 | 6.25e-114 | 359 |
MS.gene059304.t1 | AT4G38190 | 29.364 | 739 | 403 | 16 | 4 | 638 | 277 | 1000 | 3.03e-100 | 331 |
MS.gene059304.t1 | AT1G02730 | 30.637 | 754 | 381 | 20 | 3 | 624 | 322 | 1065 | 3.71e-98 | 326 |
MS.gene059304.t1 | AT1G32180 | 29.973 | 744 | 396 | 17 | 9 | 631 | 132 | 871 | 5.30e-97 | 320 |
MS.gene059304.t1 | AT1G32180 | 29.973 | 744 | 396 | 17 | 9 | 631 | 132 | 871 | 5.30e-97 | 320 |
MS.gene059304.t1 | AT3G03050 | 29.200 | 750 | 408 | 17 | 4 | 640 | 299 | 1038 | 9.53e-95 | 316 |
MS.gene059304.t1 | AT2G33100 | 29.133 | 738 | 395 | 15 | 4 | 620 | 188 | 918 | 1.85e-94 | 313 |
MS.gene059304.t1 | AT2G33100 | 29.133 | 738 | 395 | 15 | 4 | 620 | 188 | 918 | 1.85e-94 | 313 |
MS.gene059304.t1 | AT5G16910 | 28.844 | 735 | 394 | 15 | 4 | 620 | 302 | 1025 | 2.52e-93 | 312 |
MS.gene059304.t1 | AT5G44030 | 41.144 | 367 | 202 | 5 | 4 | 356 | 220 | 586 | 1.57e-87 | 295 |
MS.gene059304.t1 | AT5G44030 | 33.094 | 278 | 174 | 3 | 345 | 620 | 660 | 927 | 8.67e-40 | 157 |
MS.gene059304.t1 | AT5G44030 | 41.144 | 367 | 202 | 5 | 4 | 356 | 249 | 615 | 2.80e-87 | 295 |
MS.gene059304.t1 | AT5G44030 | 33.094 | 278 | 174 | 3 | 345 | 620 | 689 | 956 | 8.13e-40 | 157 |
MS.gene059304.t1 | AT4G24000 | 35.256 | 468 | 251 | 15 | 177 | 627 | 3 | 435 | 4.72e-78 | 258 |
MS.gene059304.t1 | AT5G44030 | 43.624 | 298 | 159 | 3 | 68 | 356 | 10 | 307 | 2.20e-75 | 257 |
MS.gene059304.t1 | AT5G44030 | 33.094 | 278 | 174 | 3 | 345 | 620 | 381 | 648 | 3.19e-40 | 157 |
MS.gene059304.t1 | AT4G23990 | 33.987 | 459 | 257 | 12 | 177 | 620 | 3 | 430 | 1.17e-74 | 249 |
Find 146 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCTAAATTTGCTGAAATT+TGG | 0.070214 | 2.2:+11307969 | MS.gene059304:CDS |
CACTGTATTCACCGTGATTA+TGG | 0.121470 | 2.2:-11307849 | None:intergenic |
CTCCTCCTCCTCTTGCTTCT+TGG | 0.121630 | 2.2:+11307009 | MS.gene059304:CDS |
ACCAGACCCAATAGCCTTTA+TGG | 0.128110 | 2.2:+11312256 | MS.gene059304:CDS |
GAGAGTGCTTGTCATATATT+TGG | 0.150924 | 2.2:+11312405 | MS.gene059304:CDS |
TGAATCAGCTACTCATATTT+TGG | 0.202057 | 2.2:+11311866 | MS.gene059304:CDS |
AACCATGAATTCTTGTTTCT+TGG | 0.206910 | 2.2:+11312731 | MS.gene059304:CDS |
TAAATTCTAGCTTACCAAAT+AGG | 0.220996 | 2.2:-11312382 | None:intergenic |
AAGGGAAGGTGTGATTATTA+TGG | 0.236197 | 2.2:-11307047 | None:intergenic |
ATCTCTTATGTTGGGCCATT+TGG | 0.240446 | 2.2:-11312304 | None:intergenic |
CATATATTTGGATCACTAAC+TGG | 0.244900 | 2.2:+11312417 | MS.gene059304:CDS |
TTTCTTTGTTATTTCAAAAT+TGG | 0.245721 | 2.2:-11312796 | None:intergenic |
CTCTAAATTTGCTGAAATTT+GGG | 0.247688 | 2.2:+11307970 | MS.gene059304:CDS |
TTGTTATTCTTCCCATTCTT+TGG | 0.251052 | 2.2:-11312710 | None:intergenic |
ACATTGTACTTCTTACAAAA+TGG | 0.256529 | 2.2:-11307995 | None:intergenic |
ACAATCTAAGTTTAGGATAA+AGG | 0.281900 | 2.2:-11311067 | None:intergenic |
CCAAATTTCAGCAAATTTAG+AGG | 0.286690 | 2.2:-11307969 | None:intergenic |
GTTGACATGGAATTGACTTT+TGG | 0.293450 | 2.2:-11309057 | None:intergenic |
AGAAGAGCATAACATATTTC+AGG | 0.303603 | 2.2:-11312455 | None:intergenic |
TGAATTATGCTAACCTTGTT+AGG | 0.309142 | 2.2:-11312515 | None:intergenic |
GTCAATTCCATGTCAACTAA+TGG | 0.311861 | 2.2:+11309063 | MS.gene059304:CDS |
GCTTGTTATGTTTCTGATGA+TGG | 0.315894 | 2.2:+11307911 | MS.gene059304:CDS |
TTGTGATGATGTGGTTGTTT+TGG | 0.333496 | 2.2:-11310905 | None:intergenic |
TCATCACAGAAATATCTAAA+TGG | 0.341589 | 2.2:-11308031 | None:intergenic |
GGATCACTAACTGGGCATTA+AGG | 0.343515 | 2.2:+11312426 | MS.gene059304:CDS |
CCAGACCCAATAGCCTTTAT+GGG | 0.348235 | 2.2:+11312257 | MS.gene059304:CDS |
GAGGCGATCTAGGAAGGTTT+TGG | 0.358416 | 2.2:-11307151 | None:intergenic |
CAACATAAGAGATGGTCTTC+AGG | 0.363015 | 2.2:+11312314 | MS.gene059304:CDS |
GAACAGCCCATAAAGGCTAT+TGG | 0.366981 | 2.2:-11312263 | None:intergenic |
TACATAGGAAGTGGATTTGC+AGG | 0.367124 | 2.2:+11311531 | MS.gene059304:CDS |
ACATCGGAGGATGTACTAAC+TGG | 0.373047 | 2.2:+11312191 | MS.gene059304:CDS |
CAACACTGCTTGGGGTAAAC+AGG | 0.379634 | 2.2:+11311965 | MS.gene059304:CDS |
GGCTTCCACAAGAGCATAGA+AGG | 0.381860 | 2.2:-11307948 | None:intergenic |
TGCCACAATTCAAACATGAT+TGG | 0.388663 | 2.2:+11308077 | MS.gene059304:CDS |
TGCCAAGAAACAAGAATTCA+TGG | 0.392386 | 2.2:-11312733 | None:intergenic |
CTGTTCACCACAAGATAACT+TGG | 0.396199 | 2.2:+11312280 | MS.gene059304:CDS |
ACTGTATTCACCGTGATTAT+GGG | 0.401091 | 2.2:-11307848 | None:intergenic |
CTATGAATACAACACTGCTT+GGG | 0.401733 | 2.2:+11311956 | MS.gene059304:CDS |
ACATGTCACAATCTAAGTTT+AGG | 0.402100 | 2.2:-11311074 | None:intergenic |
CAATCTAAGTTTAGGATAAA+GGG | 0.407191 | 2.2:-11311066 | None:intergenic |
TCTCAATTGCTTAAGTATGA+TGG | 0.409938 | 2.2:-11312763 | None:intergenic |
AAATTCTAGCTTACCAAATA+GGG | 0.411386 | 2.2:-11312381 | None:intergenic |
AGGGAAGGTGTGATTATTAT+GGG | 0.417758 | 2.2:-11307046 | None:intergenic |
TATTAGGTGGGATGGTTGTA+TGG | 0.417836 | 2.2:+11312164 | MS.gene059304:intron |
TGATTCAACAAATCCCTTTG+AGG | 0.418805 | 2.2:-11311850 | None:intergenic |
TCAATTCCATGTCAACTAAT+GGG | 0.422493 | 2.2:+11309064 | MS.gene059304:CDS |
CAATTCATTATTGTTGGCCA+TGG | 0.426729 | 2.2:-11308056 | None:intergenic |
AACAGCCCATAAAGGCTATT+GGG | 0.428787 | 2.2:-11312262 | None:intergenic |
AATGTTACCTTGATTATAGT+TGG | 0.431199 | 2.2:-11309127 | None:intergenic |
ACAAGATAACTTGGGCCAAA+TGG | 0.434984 | 2.2:+11312289 | MS.gene059304:CDS |
ACCTAAGCAAGAGGCGATCT+AGG | 0.435416 | 2.2:-11307161 | None:intergenic |
AACCTTGTTAGGCAAGAAAC+TGG | 0.441866 | 2.2:-11312504 | None:intergenic |
ATAATAGAGCACATAAAATC+AGG | 0.443215 | 2.2:+11312660 | MS.gene059304:CDS |
TGAAATTCAAAATGCAAAGA+AGG | 0.444515 | 2.2:+11311629 | MS.gene059304:CDS |
CATAGAAGAAAAGTTATGTA+TGG | 0.445792 | 2.2:+11311591 | MS.gene059304:CDS |
TGATTCTGAGCTTCCAGCAT+TGG | 0.449066 | 2.2:+11307787 | MS.gene059304:CDS |
TCCTAGATCGCCTCTTGCTT+AGG | 0.449392 | 2.2:+11307160 | MS.gene059304:CDS |
CCCATAAAGGCTATTGGGTC+TGG | 0.456254 | 2.2:-11312257 | None:intergenic |
GAATACAGTGTTATCATTGT+TGG | 0.458432 | 2.2:+11307862 | MS.gene059304:CDS |
TTGTGGTGAACAGCCCATAA+AGG | 0.462839 | 2.2:-11312270 | None:intergenic |
AACCAATCATGTTTGAATTG+TGG | 0.468516 | 2.2:-11308079 | None:intergenic |
AACCAAGAAGCAAGAGGAGG+AGG | 0.471797 | 2.2:-11307011 | None:intergenic |
CTGAAGACCATCTCTTATGT+TGG | 0.478356 | 2.2:-11312313 | None:intergenic |
GGAGTTGGTAATGATGCAAT+AGG | 0.479631 | 2.2:-11312483 | None:intergenic |
GGTATGTGCAGGAGTCCATT+TGG | 0.480683 | 2.2:-11307130 | None:intergenic |
TAGATCACAAATAGAGTTGT+GGG | 0.481223 | 2.2:-11312624 | None:intergenic |
CTGGTAAAGAGTGGTACTAA+TGG | 0.487737 | 2.2:+11312960 | MS.gene059304:CDS |
GTGTTACAGACAAGAGTCTC+TGG | 0.490146 | 2.2:+11311027 | MS.gene059304:intron |
ACAAGAGCATAGAAGGTAAG+AGG | 0.491143 | 2.2:-11307941 | None:intergenic |
TTTGGTAATATTAGGTGGGA+TGG | 0.492912 | 2.2:+11312156 | MS.gene059304:intron |
TAACAAGCTAGCTTATTAGC+TGG | 0.493726 | 2.2:-11307896 | None:intergenic |
CTCCAGTTTCTTGCCTAACA+AGG | 0.497747 | 2.2:+11312502 | MS.gene059304:CDS |
AACATAAGAGATGGTCTTCA+GGG | 0.502083 | 2.2:+11312315 | MS.gene059304:CDS |
TGAAGACCATCTCTTATGTT+GGG | 0.502676 | 2.2:-11312312 | None:intergenic |
ACATGATTGGTTGAAAATGA+AGG | 0.503007 | 2.2:+11308090 | MS.gene059304:CDS |
AGTGGATTTGCAGGACTTCA+AGG | 0.504329 | 2.2:+11311540 | MS.gene059304:CDS |
TCTTACCTTCTATGCTCTTG+TGG | 0.505123 | 2.2:+11307943 | MS.gene059304:CDS |
CAAGATCAAGAGATTTGTAA+AGG | 0.507873 | 2.2:-11311905 | None:intergenic |
AGGAGTCCATTTGGTGCTCA+TGG | 0.508334 | 2.2:-11307121 | None:intergenic |
CTTCAAGGGATTATATATGC+TGG | 0.510948 | 2.2:+11311555 | MS.gene059304:CDS |
ATGGTGGAACAACCAAAGAA+TGG | 0.512502 | 2.2:+11312698 | MS.gene059304:CDS |
TGGTGGAACAACCAAAGAAT+GGG | 0.513248 | 2.2:+11312699 | MS.gene059304:CDS |
GCGGTCAAAGATGATGCTTA+TGG | 0.516690 | 2.2:+11311201 | MS.gene059304:CDS |
ATTATGGGTGGTTCTAGCAC+TGG | 0.524715 | 2.2:-11307833 | None:intergenic |
GTATTGTAGTACATAGGAAG+TGG | 0.525317 | 2.2:+11311522 | MS.gene059304:intron |
TTGTGGCAATTCATTATTGT+TGG | 0.527636 | 2.2:-11308062 | None:intergenic |
TTACCACCATGAGCACCAAA+TGG | 0.530730 | 2.2:+11307115 | MS.gene059304:CDS |
ATTTGGCCCAAGTTATCTTG+TGG | 0.533548 | 2.2:-11312287 | None:intergenic |
AAATCATCCAACTATAATCA+AGG | 0.534421 | 2.2:+11309120 | MS.gene059304:CDS |
ACTATGAATACAACACTGCT+TGG | 0.534610 | 2.2:+11311955 | MS.gene059304:CDS |
GTTACAAACATGTCCAATGC+TGG | 0.534948 | 2.2:-11307800 | None:intergenic |
GAAATTCAAAATGCAAAGAA+GGG | 0.542534 | 2.2:+11311630 | MS.gene059304:CDS |
TGAATCCAACAAAATGCAAA+GGG | 0.546368 | 2.2:-11311127 | None:intergenic |
AATTCTCCCATTAGTTGACA+TGG | 0.546581 | 2.2:-11309070 | None:intergenic |
TATAAATTTACCTAAGCAAG+AGG | 0.549629 | 2.2:-11307170 | None:intergenic |
AGTCATGGTTTACCACCACT+TGG | 0.553899 | 2.2:+11307091 | MS.gene059304:CDS |
GAAGTTACCAATGAAAATGT+TGG | 0.558049 | 2.2:+11312837 | MS.gene059304:CDS |
GGGCTCAAATTCCACATGAA+AGG | 0.564575 | 2.2:+11312212 | MS.gene059304:CDS |
TCATTGGTAACTTCATGAGA+AGG | 0.564621 | 2.2:-11312828 | None:intergenic |
GATTATTATGGGAGGAAACT+CGG | 0.565805 | 2.2:-11307035 | None:intergenic |
CAACCACATCATCACAAAGC+TGG | 0.567676 | 2.2:+11310911 | MS.gene059304:CDS |
AAGCAAGAGGCGATCTAGGA+AGG | 0.568077 | 2.2:-11307157 | None:intergenic |
TTGAATCCAACAAAATGCAA+AGG | 0.569447 | 2.2:-11311128 | None:intergenic |
GCACCAGCTTTGTGATGATG+TGG | 0.570133 | 2.2:-11310914 | None:intergenic |
AAATTGGACAATGCTTGCTA+AGG | 0.571332 | 2.2:-11312352 | None:intergenic |
GTGGATTTGCAGGACTTCAA+GGG | 0.572131 | 2.2:+11311541 | MS.gene059304:CDS |
CAAAATGCAAAGAAGGGTCA+AGG | 0.573224 | 2.2:+11311636 | MS.gene059304:CDS |
ATATTTCTGTGATGAAGCCA+TGG | 0.580219 | 2.2:+11308039 | MS.gene059304:CDS |
GTAGATCACAAATAGAGTTG+TGG | 0.582034 | 2.2:-11312625 | None:intergenic |
TTGGTAATGATGCAATAGGC+AGG | 0.582759 | 2.2:-11312479 | None:intergenic |
ACCGCATCATAGAATCGTTG+TGG | 0.585748 | 2.2:-11311183 | None:intergenic |
TCAGCTTGTGGCTTTGCCAA+TGG | 0.587045 | 2.2:+11311227 | MS.gene059304:CDS |
TCAAATTCCACATGAAAGGA+TGG | 0.590005 | 2.2:+11312216 | MS.gene059304:CDS |
TATGAATACAACACTGCTTG+GGG | 0.596074 | 2.2:+11311957 | MS.gene059304:CDS |
ATATATTTGGATCACTAACT+GGG | 0.597544 | 2.2:+11312418 | MS.gene059304:CDS |
AGCTGGTGCAATGAATGTCT+TGG | 0.600350 | 2.2:+11310928 | MS.gene059304:CDS |
CAGGATTATCAATCAGAACA+TGG | 0.600653 | 2.2:+11312679 | MS.gene059304:CDS |
TTACCAATGAAAATGTTGGT+AGG | 0.601368 | 2.2:+11312841 | MS.gene059304:CDS |
TTAGTACCACTCTTTACCAG+TGG | 0.604307 | 2.2:-11312957 | None:intergenic |
AAGGGTCAAGGCTTCACCAA+TGG | 0.607649 | 2.2:+11311648 | MS.gene059304:CDS |
ATTGGACATGTTTGTAACAA+CGG | 0.611014 | 2.2:+11307805 | MS.gene059304:CDS |
AAATGGCCCAACATAAGAGA+TGG | 0.613887 | 2.2:+11312306 | MS.gene059304:CDS |
CATCGGAGGATGTACTAACT+GGG | 0.615869 | 2.2:+11312192 | MS.gene059304:CDS |
GTTAGGCAAGAAACTGGAGT+TGG | 0.617666 | 2.2:-11312498 | None:intergenic |
AAATGCAATAAAGCAAGGGA+AGG | 0.620983 | 2.2:-11307061 | None:intergenic |
TCTACATATCTAGAGAGAAG+AGG | 0.622858 | 2.2:+11310882 | MS.gene059304:CDS |
TGCTTATGGAAATCAGCTTG+TGG | 0.634611 | 2.2:+11311215 | MS.gene059304:CDS |
CTAGATATGTAGATAATGTG+AGG | 0.637541 | 2.2:-11310872 | None:intergenic |
CAGATCGCCATCCTTTCATG+TGG | 0.637823 | 2.2:-11312223 | None:intergenic |
GTATTCACCGTGATTATGGG+TGG | 0.643871 | 2.2:-11307845 | None:intergenic |
CTCGGTAACCAAGAAGCAAG+AGG | 0.649537 | 2.2:-11307017 | None:intergenic |
TGTTCACCACAAGATAACTT+GGG | 0.658857 | 2.2:+11312281 | MS.gene059304:CDS |
GCTAGAACCACCCATAATCA+CGG | 0.663902 | 2.2:+11307838 | MS.gene059304:CDS |
AGTCCATTTGGTGCTCATGG+TGG | 0.664459 | 2.2:-11307118 | None:intergenic |
TCCACAACGATTCTATGATG+CGG | 0.666078 | 2.2:+11311182 | MS.gene059304:CDS |
TTGGTTGGGATGGAAACCAC+TGG | 0.671984 | 2.2:+11312941 | MS.gene059304:CDS |
TGGAAACCACTGGTAAAGAG+TGG | 0.674984 | 2.2:+11312951 | MS.gene059304:CDS |
ATGGTTGTATGGATCAACAT+CGG | 0.678352 | 2.2:+11312175 | MS.gene059304:CDS |
GAAGGTGTGATTATTATGGG+AGG | 0.688869 | 2.2:-11307043 | None:intergenic |
GGTAACCAAGAAGCAAGAGG+AGG | 0.699087 | 2.2:-11307014 | None:intergenic |
GTTGTATGGATCAACATCGG+AGG | 0.702534 | 2.2:+11312178 | MS.gene059304:CDS |
AGATCACAAATAGAGTTGTG+GGG | 0.709874 | 2.2:-11312623 | None:intergenic |
GCTCATGGTGGTAATCCAAG+TGG | 0.712389 | 2.2:-11307106 | None:intergenic |
TCTAACAGGAACTCAGCATG+TGG | 0.714238 | 2.2:+11312598 | MS.gene059304:intron |
CATGGTGGTAATCCAAGTGG+TGG | 0.717748 | 2.2:-11307103 | None:intergenic |
GATTATCAATCAGAACATGG+TGG | 0.727744 | 2.2:+11312682 | MS.gene059304:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTAATATATATATTTTT+TGG | + | chr2.2:11308279-11308298 | MS.gene059304:intron | 0.0% |
!! | AATATTAATTCTATTAAGAA+GGG | + | chr2.2:11307682-11307701 | MS.gene059304:intron | 10.0% |
!! | ATATATTAAAAAAGCTAAAA+TGG | - | chr2.2:11308271-11308290 | None:intergenic | 10.0% |
!! | ATTTATTTATGTCTAAATAA+TGG | - | chr2.2:11308585-11308604 | None:intergenic | 10.0% |
!! | TAATATTAATTCTATTAAGA+AGG | + | chr2.2:11307681-11307700 | MS.gene059304:intron | 10.0% |
!! | TACAAATAATAAACTTAATA+AGG | + | chr2.2:11310269-11310288 | MS.gene059304:intron | 10.0% |
!! | TCAAAATTATTATTGAAAAT+AGG | + | chr2.2:11308824-11308843 | MS.gene059304:intron | 10.0% |
!! | TTAAAAAAAAAAATAGTGTT+TGG | + | chr2.2:11310103-11310122 | MS.gene059304:intron | 10.0% |
!! | TTTAAGTAAAAAATTACATT+TGG | - | chr2.2:11309506-11309525 | None:intergenic | 10.0% |
!! | TTTATATTTGAAAATTGATA+TGG | - | chr2.2:11308623-11308642 | None:intergenic | 10.0% |
!!! | TAGATAGTTTAATTTTTTTT+TGG | - | chr2.2:11310192-11310211 | None:intergenic | 10.0% |
!!! | TTCTATTTATGTTTTTTTTA+AGG | + | chr2.2:11308502-11308521 | MS.gene059304:intron | 10.0% |
!! | ACTAATTATAATATATGTCA+CGG | + | chr2.2:11311321-11311340 | MS.gene059304:intron | 15.0% |
!! | ATAAAATGCAATTAAGTATA+GGG | - | chr2.2:11307201-11307220 | None:intergenic | 15.0% |
!! | ATTATAATTAGTCATGTTAA+TGG | - | chr2.2:11311313-11311332 | None:intergenic | 15.0% |
!! | ATTTGTCAAAAAAAATATTG+AGG | - | chr2.2:11309919-11309938 | None:intergenic | 15.0% |
!! | GAAAAATAATGTATACTATA+AGG | - | chr2.2:11307249-11307268 | None:intergenic | 15.0% |
!! | TAACATTAACATTTATAGAA+AGG | + | chr2.2:11309143-11309162 | MS.gene059304:intron | 15.0% |
!! | TTGAAAATAGGAAAAATATT+TGG | + | chr2.2:11308836-11308855 | MS.gene059304:intron | 15.0% |
!!! | AATATATATATTTTTTGGCA+TGG | + | chr2.2:11308284-11308303 | MS.gene059304:intron | 15.0% |
!!! | ACCATTTTTTAAATAACTTA+TGG | - | chr2.2:11308355-11308374 | None:intergenic | 15.0% |
!!! | ATATATATTAATACCCATTT+TGG | + | chr2.2:11310363-11310382 | MS.gene059304:intron | 15.0% |
!!! | ATTTGATGATTATAAAACTA+AGG | - | chr2.2:11310794-11310813 | None:intergenic | 15.0% |
!!! | ATTTGTTTTGACAATATTAA+TGG | - | chr2.2:11308553-11308572 | None:intergenic | 15.0% |
!!! | CCATTTTTTAAATAACTTAT+GGG | - | chr2.2:11308354-11308373 | None:intergenic | 15.0% |
!!! | TTATATTTTTTTGGAGTATA+AGG | + | chr2.2:11310957-11310976 | MS.gene059304:intron | 15.0% |
!!! | TTTCTTTGTTATTTCAAAAT+TGG | - | chr2.2:11312799-11312818 | None:intergenic | 15.0% |
!! | AAAGAAACAATGCAAAAATT+TGG | + | chr2.2:11311825-11311844 | MS.gene059304:CDS | 20.0% |
!! | AAAGAACAAATGTTAAAATC+CGG | - | chr2.2:11307554-11307573 | None:intergenic | 20.0% |
!! | AATATAAAACCCTAAAACAA+TGG | - | chr2.2:11309431-11309450 | None:intergenic | 20.0% |
!! | AGAAAAAAGAAAAAAGAAAG+TGG | + | chr2.2:11308795-11308814 | MS.gene059304:intron | 20.0% |
!! | AGTATATCTTAATATACCAT+TGG | - | chr2.2:11311667-11311686 | None:intergenic | 20.0% |
!! | ATAAAAATGCAATAAAGCAA+GGG | - | chr2.2:11307068-11307087 | None:intergenic | 20.0% |
!! | ATAGTAAAAGATTTCAATGT+GGG | - | chr2.2:11307659-11307678 | None:intergenic | 20.0% |
!! | ATCTGAACCAATAAAAAAAT+CGG | - | chr2.2:11309343-11309362 | None:intergenic | 20.0% |
!! | CCCATAAGTTATTTAAAAAA+TGG | + | chr2.2:11308351-11308370 | MS.gene059304:intron | 20.0% |
!! | GAATGCTATTATAAAATAGA+AGG | + | chr2.2:11311737-11311756 | MS.gene059304:intron | 20.0% |
!! | GATAAAATGCAATTAAGTAT+AGG | - | chr2.2:11307202-11307221 | None:intergenic | 20.0% |
!! | GTAAATAATTACAACAAAGA+GGG | + | chr2.2:11307488-11307507 | MS.gene059304:intron | 20.0% |
!! | TAAATAATTACAACAAAGAG+GGG | + | chr2.2:11307489-11307508 | MS.gene059304:intron | 20.0% |
!! | TATAGTAAAAGATTTCAATG+TGG | - | chr2.2:11307660-11307679 | None:intergenic | 20.0% |
!! | TGTAAATAATTACAACAAAG+AGG | + | chr2.2:11307487-11307506 | MS.gene059304:intron | 20.0% |
!! | TTAAAACTTGCATTAAAATC+TGG | - | chr2.2:11307382-11307401 | None:intergenic | 20.0% |
!! | TTTCTTTACCAACATTATAT+TGG | - | chr2.2:11311460-11311479 | None:intergenic | 20.0% |
!!! | AATTGTTTTTCCATTGTTTT+AGG | + | chr2.2:11309418-11309437 | MS.gene059304:intron | 20.0% |
!!! | ATAGCTTTAGAATACAATAT+TGG | + | chr2.2:11308905-11308924 | MS.gene059304:intron | 20.0% |
!!! | ATTGTTTTTCCATTGTTTTA+GGG | + | chr2.2:11309419-11309438 | MS.gene059304:intron | 20.0% |
!!! | ATTTGTTGTTTTTTTCCAAA+AGG | + | chr2.2:11307759-11307778 | MS.gene059304:intron | 20.0% |
!!! | CTAATATTTTCTTCTTTATC+CGG | + | chr2.2:11307532-11307551 | MS.gene059304:intron | 20.0% |
!!! | GTTAACTTTTTGGTAATATT+AGG | + | chr2.2:11312148-11312167 | MS.gene059304:intron | 20.0% |
!!! | TCAAAATGAAAATTTTGTTG+AGG | + | chr2.2:11311708-11311727 | MS.gene059304:intron | 20.0% |
!!! | TGGTAACGTTTATATTTTTT+TGG | + | chr2.2:11310948-11310967 | MS.gene059304:intron | 20.0% |
!!! | TTTGTTGTTTTTTTCCAAAA+GGG | + | chr2.2:11307760-11307779 | MS.gene059304:intron | 20.0% |
!!! | TTTTATTTTGTGTTTTTACG+TGG | + | chr2.2:11308651-11308670 | MS.gene059304:intron | 20.0% |
! | AAACGTGTAATTACCAAAAT+GGG | - | chr2.2:11310379-11310398 | None:intergenic | 25.0% |
! | AAATCATCCAACTATAATCA+AGG | + | chr2.2:11309120-11309139 | MS.gene059304:CDS | 25.0% |
! | AATGTTACCTTGATTATAGT+TGG | - | chr2.2:11309130-11309149 | None:intergenic | 25.0% |
! | ACATTGTACTTCTTACAAAA+TGG | - | chr2.2:11307998-11308017 | None:intergenic | 25.0% |
! | ACTAAATAATTGGTCACAAA+AGG | - | chr2.2:11309596-11309615 | None:intergenic | 25.0% |
! | AGTATATTAGTCGTTGAATT+TGG | + | chr2.2:11307283-11307302 | MS.gene059304:intron | 25.0% |
! | AGTCAAAATTCAATGTGTTA+TGG | - | chr2.2:11310077-11310096 | None:intergenic | 25.0% |
! | ATAATAGAGCACATAAAATC+AGG | + | chr2.2:11312660-11312679 | MS.gene059304:CDS | 25.0% |
! | ATAGAAAAAATGTGATTGAG+AGG | - | chr2.2:11311380-11311399 | None:intergenic | 25.0% |
! | ATATATTTGGATCACTAACT+GGG | + | chr2.2:11312418-11312437 | MS.gene059304:CDS | 25.0% |
! | ATGTGTTATGGAAAACTTAA+TGG | - | chr2.2:11310065-11310084 | None:intergenic | 25.0% |
! | CAAAAATATAAAATGTGACG+TGG | - | chr2.2:11308325-11308344 | None:intergenic | 25.0% |
! | CATAAAAATGCAATAAAGCA+AGG | - | chr2.2:11307069-11307088 | None:intergenic | 25.0% |
! | CATAGAAGAAAAGTTATGTA+TGG | + | chr2.2:11311591-11311610 | MS.gene059304:CDS | 25.0% |
! | CGTTTACTTACTTAAGAAAA+TGG | + | chr2.2:11308162-11308181 | MS.gene059304:intron | 25.0% |
! | CTAAATAATTGGTCACAAAA+GGG | - | chr2.2:11309595-11309614 | None:intergenic | 25.0% |
! | CTATATAGTATATACCATAC+CGG | - | chr2.2:11307619-11307638 | None:intergenic | 25.0% |
! | GAAATTCAAAATGCAAAGAA+GGG | + | chr2.2:11311630-11311649 | MS.gene059304:CDS | 25.0% |
! | GAATGAGAATTGATTATGTT+TGG | - | chr2.2:11310470-11310489 | None:intergenic | 25.0% |
! | GTTTATGCTAATTGACTAAT+AGG | - | chr2.2:11311770-11311789 | None:intergenic | 25.0% |
! | TAAACGTGTAATTACCAAAA+TGG | - | chr2.2:11310380-11310399 | None:intergenic | 25.0% |
! | TAATTATTTACATGCATCCA+AGG | - | chr2.2:11307479-11307498 | None:intergenic | 25.0% |
! | TAGAATACAATATTGGATCT+TGG | + | chr2.2:11308912-11308931 | MS.gene059304:intron | 25.0% |
! | TATAAATTTACCTAAGCAAG+AGG | - | chr2.2:11307173-11307192 | None:intergenic | 25.0% |
! | TATATAGTATATACCATACC+GGG | - | chr2.2:11307618-11307637 | None:intergenic | 25.0% |
! | TATCATTTCTCAAAGACAAA+AGG | - | chr2.2:11308199-11308218 | None:intergenic | 25.0% |
! | TCATCACAGAAATATCTAAA+TGG | - | chr2.2:11308034-11308053 | None:intergenic | 25.0% |
! | TCATTTGTGAAGCTAAAAAT+GGG | + | chr2.2:11308967-11308986 | MS.gene059304:intron | 25.0% |
! | TGAAATTCAAAATGCAAAGA+AGG | + | chr2.2:11311629-11311648 | MS.gene059304:CDS | 25.0% |
! | TGTGTTATGGAAAACTTAAT+GGG | - | chr2.2:11310064-11310083 | None:intergenic | 25.0% |
! | TTCATTTGTGAAGCTAAAAA+TGG | + | chr2.2:11308966-11308985 | MS.gene059304:intron | 25.0% |
! | TTTGAATGAAAAGTGAGTTT+GGG | - | chr2.2:11309739-11309758 | None:intergenic | 25.0% |
!! | AAACTTGTTTACAACTTTGT+TGG | - | chr2.2:11309864-11309883 | None:intergenic | 25.0% |
!! | ACAATCTAAGTTTAGGATAA+AGG | - | chr2.2:11311070-11311089 | None:intergenic | 25.0% |
!! | AGTCAATTAGCATAAACTTT+TGG | + | chr2.2:11311773-11311792 | MS.gene059304:intron | 25.0% |
!! | CAATCTAAGTTTAGGATAAA+GGG | - | chr2.2:11311069-11311088 | None:intergenic | 25.0% |
!! | CCAAAATAATTTTCTTAGCT+AGG | + | chr2.2:11312023-11312042 | MS.gene059304:intron | 25.0% |
!! | CCTAGCTAAGAAAATTATTT+TGG | - | chr2.2:11312026-11312045 | None:intergenic | 25.0% |
!! | CTAAACTTTTATATCCAAGA+GGG | + | chr2.2:11312053-11312072 | MS.gene059304:intron | 25.0% |
!! | GAAAGGAATAGAAATCTTTT+TGG | + | chr2.2:11309160-11309179 | MS.gene059304:intron | 25.0% |
!! | GATATATTGACAACCATTTT+AGG | + | chr2.2:11308215-11308234 | MS.gene059304:intron | 25.0% |
!! | GCATTTTGAATTTCATTATG+AGG | - | chr2.2:11311624-11311643 | None:intergenic | 25.0% |
!! | TCATAGCAATTTTTATGAGT+TGG | + | chr2.2:11312922-11312941 | MS.gene059304:intron | 25.0% |
!! | TGGATATAAAAGTTTAGGTT+TGG | - | chr2.2:11312050-11312069 | None:intergenic | 25.0% |
!! | TTGAAGTCATTAAAGTTTTC+AGG | + | chr2.2:11309271-11309290 | MS.gene059304:intron | 25.0% |
!! | TTTTGTGTATTGTAGTACAT+AGG | + | chr2.2:11311516-11311535 | MS.gene059304:intron | 25.0% |
!!! | AAATTCTAGCTTACCAAATA+GGG | - | chr2.2:11312384-11312403 | None:intergenic | 25.0% |
!!! | AACTTTTTGGTAATATTAGG+TGG | + | chr2.2:11312151-11312170 | MS.gene059304:intron | 25.0% |
!!! | ACCATTTTAGGTCAAATTAA+CGG | + | chr2.2:11308227-11308246 | MS.gene059304:intron | 25.0% |
!!! | ACTTTTTGGTAATATTAGGT+GGG | + | chr2.2:11312152-11312171 | MS.gene059304:intron | 25.0% |
!!! | ATTTTTAGCTTCACAAATGA+AGG | - | chr2.2:11308967-11308986 | None:intergenic | 25.0% |
!!! | CTCTAAATTTGCTGAAATTT+GGG | + | chr2.2:11307970-11307989 | MS.gene059304:CDS | 25.0% |
!!! | TAAATTCTAGCTTACCAAAT+AGG | - | chr2.2:11312385-11312404 | None:intergenic | 25.0% |
!!! | TGGTATGTCATTTTTTTCAA+TGG | - | chr2.2:11309233-11309252 | None:intergenic | 25.0% |
AACCAATCATGTTTGAATTG+TGG | - | chr2.2:11308082-11308101 | None:intergenic | 30.0% | |
AACTTGCATTAAAATCTGGA+CGG | - | chr2.2:11307378-11307397 | None:intergenic | 30.0% | |
AATAATGCCAGTGGTAATAA+TGG | - | chr2.2:11309253-11309272 | None:intergenic | 30.0% | |
ACATGTCACAATCTAAGTTT+AGG | - | chr2.2:11311077-11311096 | None:intergenic | 30.0% | |
ACCAAAAAAAACTACCTACA+TGG | + | chr2.2:11310739-11310758 | MS.gene059304:intron | 30.0% | |
ACTACATTTACATATTCTGC+AGG | - | chr2.2:11308463-11308482 | None:intergenic | 30.0% | |
AGGTGAGTAAACAAATATTG+AGG | - | chr2.2:11309947-11309966 | None:intergenic | 30.0% | |
ATAAAATGTGACGTGGATAT+TGG | - | chr2.2:11308318-11308337 | None:intergenic | 30.0% | |
ATATAGTTGGTCATCTTTAG+TGG | + | chr2.2:11311347-11311366 | MS.gene059304:intron | 30.0% | |
ATGACACGATTCATATTTCA+AGG | - | chr2.2:11307428-11307447 | None:intergenic | 30.0% | |
ATTGGACATGTTTGTAACAA+CGG | + | chr2.2:11307805-11307824 | MS.gene059304:CDS | 30.0% | |
CAAGATCAAGAGATTTGTAA+AGG | - | chr2.2:11311908-11311927 | None:intergenic | 30.0% | |
CATATATTTGGATCACTAAC+TGG | + | chr2.2:11312417-11312436 | MS.gene059304:CDS | 30.0% | |
CCAAAAAAAACTACCTACAT+GGG | + | chr2.2:11310740-11310759 | MS.gene059304:intron | 30.0% | |
CCAAATTTCAGCAAATTTAG+AGG | - | chr2.2:11307972-11307991 | None:intergenic | 30.0% | |
CCTCTTGGATATAAAAGTTT+AGG | - | chr2.2:11312055-11312074 | None:intergenic | 30.0% | |
CTAGATATGTAGATAATGTG+AGG | - | chr2.2:11310875-11310894 | None:intergenic | 30.0% | |
CTTTGAATGAAAAGTGAGTT+TGG | - | chr2.2:11309740-11309759 | None:intergenic | 30.0% | |
GAAGTTACCAATGAAAATGT+TGG | + | chr2.2:11312837-11312856 | MS.gene059304:CDS | 30.0% | |
GAATACAGTGTTATCATTGT+TGG | + | chr2.2:11307862-11307881 | MS.gene059304:CDS | 30.0% | |
GAGAATGATAAAGATGTCAT+GGG | - | chr2.2:11309842-11309861 | None:intergenic | 30.0% | |
GGTGTAAAAAATAGAGTAAG+TGG | + | chr2.2:11308740-11308759 | MS.gene059304:intron | 30.0% | |
TAGATCACAAATAGAGTTGT+GGG | - | chr2.2:11312627-11312646 | None:intergenic | 30.0% | |
TATAGTTGGTCATCTTTAGT+GGG | + | chr2.2:11311348-11311367 | MS.gene059304:intron | 30.0% | |
TATGTCACGGAAAATATAGT+TGG | + | chr2.2:11311334-11311353 | MS.gene059304:intron | 30.0% | |
TCAATTCCATGTCAACTAAT+GGG | + | chr2.2:11309064-11309083 | MS.gene059304:CDS | 30.0% | |
TCCTTAAAAAAACCAACTAC+CGG | - | chr2.2:11310768-11310787 | None:intergenic | 30.0% | |
TCTCAATTGCTTAAGTATGA+TGG | - | chr2.2:11312766-11312785 | None:intergenic | 30.0% | |
TGAATCCAACAAAATGCAAA+GGG | - | chr2.2:11311130-11311149 | None:intergenic | 30.0% | |
TGAATTATGCTAACCTTGTT+AGG | - | chr2.2:11312518-11312537 | None:intergenic | 30.0% | |
TTACCAATGAAAATGTTGGT+AGG | + | chr2.2:11312841-11312860 | MS.gene059304:CDS | 30.0% | |
TTATAGACTAAGTGTGTGTT+TGG | - | chr2.2:11310563-11310582 | None:intergenic | 30.0% | |
TTGAATCCAACAAAATGCAA+AGG | - | chr2.2:11311131-11311150 | None:intergenic | 30.0% | |
TTGAATGAAAAGTGAGTTTG+GGG | - | chr2.2:11309738-11309757 | None:intergenic | 30.0% | |
TTGTGGCAATTCATTATTGT+TGG | - | chr2.2:11308065-11308084 | None:intergenic | 30.0% | |
TTTGAAAATGACATCTAGCA+TGG | - | chr2.2:11308701-11308720 | None:intergenic | 30.0% | |
! | AAACTTTTGGTATCTTGTGT+AGG | + | chr2.2:11311786-11311805 | MS.gene059304:intron | 30.0% |
! | AAAGATGTCATGGGTAATTT+TGG | - | chr2.2:11309833-11309852 | None:intergenic | 30.0% |
! | AACCATGAATTCTTGTTTCT+TGG | + | chr2.2:11312731-11312750 | MS.gene059304:CDS | 30.0% |
! | ACATGATTGGTTGAAAATGA+AGG | + | chr2.2:11308090-11308109 | MS.gene059304:CDS | 30.0% |
! | AGAAGAGCATAACATATTTC+AGG | - | chr2.2:11312458-11312477 | None:intergenic | 30.0% |
! | CAAAAATTTGGAACCTCAAA+GGG | + | chr2.2:11311837-11311856 | MS.gene059304:CDS | 30.0% |
! | CCTAAACTTTTATATCCAAG+AGG | + | chr2.2:11312052-11312071 | MS.gene059304:intron | 30.0% |
! | GTTTTTCTTCATATACTGCT+AGG | + | chr2.2:11310814-11310833 | MS.gene059304:intron | 30.0% |
! | TCCGTTAATTTGACCTAAAA+TGG | - | chr2.2:11308231-11308250 | None:intergenic | 30.0% |
! | TGAATCAGCTACTCATATTT+TGG | + | chr2.2:11311866-11311885 | MS.gene059304:CDS | 30.0% |
! | TGCATTTTGTTGGATTCAAA+GGG | + | chr2.2:11311132-11311151 | MS.gene059304:CDS | 30.0% |
! | TGCTTCTTACGTTAACTTTT+TGG | + | chr2.2:11312138-11312157 | MS.gene059304:intron | 30.0% |
! | TTGCATTTTGTTGGATTCAA+AGG | + | chr2.2:11311131-11311150 | MS.gene059304:CDS | 30.0% |
! | TTGCATTTTTATGTGAGTCA+TGG | + | chr2.2:11307076-11307095 | MS.gene059304:CDS | 30.0% |
! | TTGTTATTCTTCCCATTCTT+TGG | - | chr2.2:11312713-11312732 | None:intergenic | 30.0% |
!! | CAGGACAATTATTTTGCTTT+TGG | - | chr2.2:11308444-11308463 | None:intergenic | 30.0% |
!! | CCTCTAAATTTGCTGAAATT+TGG | + | chr2.2:11307969-11307988 | MS.gene059304:CDS | 30.0% |
!! | TGTGTGTTTTTACAATTTGC+AGG | + | chr2.2:11308994-11309013 | MS.gene059304:intron | 30.0% |
!! | TTGACATGGAATTGACTTTT+GGG | - | chr2.2:11309059-11309078 | None:intergenic | 30.0% |
!!! | AGCAATTTTTATGAGTTGGT+TGG | + | chr2.2:11312926-11312945 | MS.gene059304:intron | 30.0% |
!!! | GCAATTTTTATGAGTTGGTT+GGG | + | chr2.2:11312927-11312946 | MS.gene059304:intron | 30.0% |
!!! | TCACAGTTTTTTATGGTGTT+TGG | + | chr2.2:11309675-11309694 | MS.gene059304:intron | 30.0% |
AAATGCAATAAAGCAAGGGA+AGG | - | chr2.2:11307064-11307083 | None:intergenic | 35.0% | |
AACATAAGAGATGGTCTTCA+GGG | + | chr2.2:11312315-11312334 | MS.gene059304:CDS | 35.0% | |
AACCTTTAATGACAGCTGAT+AGG | + | chr2.2:11308719-11308738 | MS.gene059304:intron | 35.0% | |
AATGACTTCAATAATGCCAG+TGG | - | chr2.2:11309262-11309281 | None:intergenic | 35.0% | |
AATTCTCCCATTAGTTGACA+TGG | - | chr2.2:11309073-11309092 | None:intergenic | 35.0% | |
ACTATGAATACAACACTGCT+TGG | + | chr2.2:11311955-11311974 | MS.gene059304:CDS | 35.0% | |
ACTGTATTCACCGTGATTAT+GGG | - | chr2.2:11307851-11307870 | None:intergenic | 35.0% | |
AGATCACAAATAGAGTTGTG+GGG | - | chr2.2:11312626-11312645 | None:intergenic | 35.0% | |
ATAGTTGGTCATCTTTAGTG+GGG | + | chr2.2:11311349-11311368 | MS.gene059304:intron | 35.0% | |
ATGGTTGTATGGATCAACAT+CGG | + | chr2.2:11312175-11312194 | MS.gene059304:CDS | 35.0% | |
CAATTCATTATTGTTGGCCA+TGG | - | chr2.2:11308059-11308078 | None:intergenic | 35.0% | |
CAGGATTATCAATCAGAACA+TGG | + | chr2.2:11312679-11312698 | MS.gene059304:CDS | 35.0% | |
CCAAACGAGCACTAAATAAT+TGG | - | chr2.2:11309606-11309625 | None:intergenic | 35.0% | |
CCAATTATTTAGTGCTCGTT+TGG | + | chr2.2:11309603-11309622 | MS.gene059304:intron | 35.0% | |
CTAGCATGGTCAAAGAAAAA+AGG | - | chr2.2:11308687-11308706 | None:intergenic | 35.0% | |
CTATGAATACAACACTGCTT+GGG | + | chr2.2:11311956-11311975 | MS.gene059304:CDS | 35.0% | |
CTTCAAGGGATTATATATGC+TGG | + | chr2.2:11311555-11311574 | MS.gene059304:CDS | 35.0% | |
GATCTCAATACAGTTCTTCT+CGG | + | chr2.2:11311433-11311452 | MS.gene059304:intron | 35.0% | |
GATGCTTCACACTAATAACA+TGG | - | chr2.2:11311265-11311284 | None:intergenic | 35.0% | |
GATTATCAATCAGAACATGG+TGG | + | chr2.2:11312682-11312701 | MS.gene059304:CDS | 35.0% | |
GATTATTATGGGAGGAAACT+CGG | - | chr2.2:11307038-11307057 | None:intergenic | 35.0% | |
GCTAAACTGATCCAAGATAA+GGG | - | chr2.2:11307588-11307607 | None:intergenic | 35.0% | |
GGAGAATGATAAAGATGTCA+TGG | - | chr2.2:11309843-11309862 | None:intergenic | 35.0% | |
GTAGATCACAAATAGAGTTG+TGG | - | chr2.2:11312628-11312647 | None:intergenic | 35.0% | |
GTATTGTAGTACATAGGAAG+TGG | + | chr2.2:11311522-11311541 | MS.gene059304:intron | 35.0% | |
GTCAATTCCATGTCAACTAA+TGG | + | chr2.2:11309063-11309082 | MS.gene059304:CDS | 35.0% | |
TACATCATTGGTCATTGGAT+CGG | + | chr2.2:11307347-11307366 | MS.gene059304:intron | 35.0% | |
TATGAATACAACACTGCTTG+GGG | + | chr2.2:11311957-11311976 | MS.gene059304:CDS | 35.0% | |
TCAAATTCCACATGAAAGGA+TGG | + | chr2.2:11312216-11312235 | MS.gene059304:CDS | 35.0% | |
TCCAAGATAAGGGTTAAAAG+CGG | - | chr2.2:11307578-11307597 | None:intergenic | 35.0% | |
TCTACATATCTAGAGAGAAG+AGG | + | chr2.2:11310882-11310901 | MS.gene059304:CDS | 35.0% | |
TGAAGACCATCTCTTATGTT+GGG | - | chr2.2:11312315-11312334 | None:intergenic | 35.0% | |
TGACATACCATTATTACCAC+TGG | + | chr2.2:11309243-11309262 | MS.gene059304:intron | 35.0% | |
TGATTCAACAAATCCCTTTG+AGG | - | chr2.2:11311853-11311872 | None:intergenic | 35.0% | |
TGCCAAGAAACAAGAATTCA+TGG | - | chr2.2:11312736-11312755 | None:intergenic | 35.0% | |
TGCCACAATTCAAACATGAT+TGG | + | chr2.2:11308077-11308096 | MS.gene059304:CDS | 35.0% | |
TGTTCACCACAAGATAACTT+GGG | + | chr2.2:11312281-11312300 | MS.gene059304:CDS | 35.0% | |
TTCTCGGACCAATATAATGT+TGG | + | chr2.2:11311449-11311468 | MS.gene059304:intron | 35.0% | |
! | AAATTGGACAATGCTTGCTA+AGG | - | chr2.2:11312355-11312374 | None:intergenic | 35.0% |
! | AAGGGAAGGTGTGATTATTA+TGG | - | chr2.2:11307050-11307069 | None:intergenic | 35.0% |
! | AGGGAAGGTGTGATTATTAT+GGG | - | chr2.2:11307049-11307068 | None:intergenic | 35.0% |
! | ATATTTCTGTGATGAAGCCA+TGG | + | chr2.2:11308039-11308058 | MS.gene059304:CDS | 35.0% |
! | ATGGTAAATTGACTCACCAT+TGG | - | chr2.2:11311246-11311265 | None:intergenic | 35.0% |
! | CCAAATAGGGTACCAAAAAT+TGG | - | chr2.2:11312371-11312390 | None:intergenic | 35.0% |
! | GAACCTACCAACATTTTCAT+TGG | - | chr2.2:11312847-11312866 | None:intergenic | 35.0% |
! | GAACTCGAGATTTTGTTGAA+AGG | + | chr2.2:11311411-11311430 | MS.gene059304:intron | 35.0% |
! | GCAAAAATTTGGAACCTCAA+AGG | + | chr2.2:11311836-11311855 | MS.gene059304:CDS | 35.0% |
! | TAACAAGCTAGCTTATTAGC+TGG | - | chr2.2:11307899-11307918 | None:intergenic | 35.0% |
! | TCATTGGTAACTTCATGAGA+AGG | - | chr2.2:11312831-11312850 | None:intergenic | 35.0% |
! | TTTGGTAATATTAGGTGGGA+TGG | + | chr2.2:11312156-11312175 | MS.gene059304:intron | 35.0% |
!! | ACTCACTTTTCATTCAAAGC+TGG | + | chr2.2:11309741-11309760 | MS.gene059304:intron | 35.0% |
!! | AGCAAGCATTGTCCAATTTT+TGG | + | chr2.2:11312356-11312375 | MS.gene059304:CDS | 35.0% |
!! | CAGCTACTCATATTTTGGAA+GGG | + | chr2.2:11311871-11311890 | MS.gene059304:CDS | 35.0% |
!! | GAGAGTGCTTGTCATATATT+TGG | + | chr2.2:11312405-11312424 | MS.gene059304:CDS | 35.0% |
!! | GAGTTTGAGCGAATTGATTT+TGG | - | chr2.2:11310506-11310525 | None:intergenic | 35.0% |
!! | GCTTGTTATGTTTCTGATGA+TGG | + | chr2.2:11307911-11307930 | MS.gene059304:CDS | 35.0% |
!! | GTTGACATGGAATTGACTTT+TGG | - | chr2.2:11309060-11309079 | None:intergenic | 35.0% |
!! | TCAGCTACTCATATTTTGGA+AGG | + | chr2.2:11311870-11311889 | MS.gene059304:CDS | 35.0% |
!! | TCTCATGAGTTGATGTTGTT+TGG | - | chr2.2:11310426-11310445 | None:intergenic | 35.0% |
!! | TTGTGATGATGTGGTTGTTT+TGG | - | chr2.2:11310908-11310927 | None:intergenic | 35.0% |
!!! | CCAATTTTTGGTACCCTATT+TGG | + | chr2.2:11312368-11312387 | MS.gene059304:CDS | 35.0% |
!!! | CCCATGTAGGTAGTTTTTTT+TGG | - | chr2.2:11310743-11310762 | None:intergenic | 35.0% |
!!! | TCCGGTAGTTGGTTTTTTTA+AGG | + | chr2.2:11310764-11310783 | MS.gene059304:intron | 35.0% |
!!! | TTTTTATGAGTTGGTTGGGA+TGG | + | chr2.2:11312931-11312950 | MS.gene059304:CDS | 35.0% |
AAAACTACCTACATGGGATC+CGG | + | chr2.2:11310746-11310765 | MS.gene059304:intron | 40.0% | |
AAATGGCCCAACATAAGAGA+TGG | + | chr2.2:11312306-11312325 | MS.gene059304:CDS | 40.0% | |
AACAGCCCATAAAGGCTATT+GGG | - | chr2.2:11312265-11312284 | None:intergenic | 40.0% | |
AACCTTGTTAGGCAAGAAAC+TGG | - | chr2.2:11312507-11312526 | None:intergenic | 40.0% | |
ACAAACAAAATTGTCGTGCC+CGG | - | chr2.2:11312897-11312916 | None:intergenic | 40.0% | |
ACAAGATAACTTGGGCCAAA+TGG | + | chr2.2:11312289-11312308 | MS.gene059304:CDS | 40.0% | |
ACATCATTGGTCATTGGATC+GGG | + | chr2.2:11307348-11307367 | MS.gene059304:intron | 40.0% | |
AGAAGCGATTCACTTAAACG+TGG | + | chr2.2:11309706-11309725 | MS.gene059304:intron | 40.0% | |
ATCTCTTATGTTGGGCCATT+TGG | - | chr2.2:11312307-11312326 | None:intergenic | 40.0% | |
ATTTGGCCCAAGTTATCTTG+TGG | - | chr2.2:11312290-11312309 | None:intergenic | 40.0% | |
CAAAATGCAAAGAAGGGTCA+AGG | + | chr2.2:11311636-11311655 | MS.gene059304:CDS | 40.0% | |
CAACATAAGAGATGGTCTTC+AGG | + | chr2.2:11312314-11312333 | MS.gene059304:CDS | 40.0% | |
CACCTATCAGCTGTCATTAA+AGG | - | chr2.2:11308724-11308743 | None:intergenic | 40.0% | |
CACTGTATTCACCGTGATTA+TGG | - | chr2.2:11307852-11307871 | None:intergenic | 40.0% | |
CTGAAGACCATCTCTTATGT+TGG | - | chr2.2:11312316-11312335 | None:intergenic | 40.0% | |
CTGTTCACCACAAGATAACT+TGG | + | chr2.2:11312280-11312299 | MS.gene059304:CDS | 40.0% | |
GACTAAGTGTGTGTTTGGTA+TGG | - | chr2.2:11310558-11310577 | None:intergenic | 40.0% | |
GATTCACTTAAACGTGGTGT+AGG | + | chr2.2:11309712-11309731 | MS.gene059304:intron | 40.0% | |
GCGGTTTATGAATTCAAACG+CGG | + | chr2.2:11309650-11309669 | MS.gene059304:intron | 40.0% | |
GGAATGAAAAATCATCGCTG+TGG | - | chr2.2:11309898-11309917 | None:intergenic | 40.0% | |
GGCTAAACTGATCCAAGATA+AGG | - | chr2.2:11307589-11307608 | None:intergenic | 40.0% | |
GTCAGTACATCATTGGTCAT+TGG | + | chr2.2:11307342-11307361 | MS.gene059304:intron | 40.0% | |
GTTACAAACATGTCCAATGC+TGG | - | chr2.2:11307803-11307822 | None:intergenic | 40.0% | |
TAAGTGTGTGTTTGGTATGG+CGG | - | chr2.2:11310555-11310574 | None:intergenic | 40.0% | |
TATTAGGTGGGATGGTTGTA+TGG | + | chr2.2:11312164-11312183 | MS.gene059304:intron | 40.0% | |
TCACGTAGTCAGTACATCAT+TGG | + | chr2.2:11307335-11307354 | MS.gene059304:intron | 40.0% | |
TCCACAACGATTCTATGATG+CGG | + | chr2.2:11311182-11311201 | MS.gene059304:CDS | 40.0% | |
TCTTACCTTCTATGCTCTTG+TGG | + | chr2.2:11307943-11307962 | MS.gene059304:CDS | 40.0% | |
TGCTTATGGAAATCAGCTTG+TGG | + | chr2.2:11311215-11311234 | MS.gene059304:CDS | 40.0% | |
TGGTGGAACAACCAAAGAAT+GGG | + | chr2.2:11312699-11312718 | MS.gene059304:CDS | 40.0% | |
TGTGACAATGATGCTCTAAC+AGG | + | chr2.2:11312584-11312603 | MS.gene059304:intron | 40.0% | |
TTAGGGAAGAAGCTGGAATT+GGG | + | chr2.2:11310030-11310049 | MS.gene059304:intron | 40.0% | |
TTAGTACCACTCTTTACCAG+TGG | - | chr2.2:11312960-11312979 | None:intergenic | 40.0% | |
! | ACAAGAGCATAGAAGGTAAG+AGG | - | chr2.2:11307944-11307963 | None:intergenic | 40.0% |
! | ATGGTGGAACAACCAAAGAA+TGG | + | chr2.2:11312698-11312717 | MS.gene059304:CDS | 40.0% |
! | CTCAGAATCAGATACCCTTT+TGG | - | chr2.2:11307777-11307796 | None:intergenic | 40.0% |
! | GAAGGTGTGATTATTATGGG+AGG | - | chr2.2:11307046-11307065 | None:intergenic | 40.0% |
! | TACATAGGAAGTGGATTTGC+AGG | + | chr2.2:11311531-11311550 | MS.gene059304:CDS | 40.0% |
! | TCAGGTTGTACAATGTACAC+TGG | + | chr2.2:11309289-11309308 | MS.gene059304:intron | 40.0% |
!! | ACCGCTTTTAACCCTTATCT+TGG | + | chr2.2:11307574-11307593 | MS.gene059304:intron | 40.0% |
!! | CGAGTCGCTTATTTTTCTAC+CGG | + | chr2.2:11312875-11312894 | MS.gene059304:intron | 40.0% |
!! | GAGTCGCTTATTTTTCTACC+GGG | + | chr2.2:11312876-11312895 | MS.gene059304:intron | 40.0% |
!! | GGAGTTGGTAATGATGCAAT+AGG | - | chr2.2:11312486-11312505 | None:intergenic | 40.0% |
!! | TTGGTAATGATGCAATAGGC+AGG | - | chr2.2:11312482-11312501 | None:intergenic | 40.0% |
!!! | CGCGGTTTCACAGTTTTTTA+TGG | + | chr2.2:11309668-11309687 | MS.gene059304:intron | 40.0% |
!!! | GGTAGGGCCGATTTTTTTAT+TGG | + | chr2.2:11309333-11309352 | MS.gene059304:intron | 40.0% |
ACATCGGAGGATGTACTAAC+TGG | + | chr2.2:11312191-11312210 | MS.gene059304:CDS | 45.0% | |
ACCAGACCCAATAGCCTTTA+TGG | + | chr2.2:11312256-11312275 | MS.gene059304:CDS | 45.0% | |
ACCGCATCATAGAATCGTTG+TGG | - | chr2.2:11311186-11311205 | None:intergenic | 45.0% | |
AGCTGGTGCAATGAATGTCT+TGG | + | chr2.2:11310928-11310947 | MS.gene059304:CDS | 45.0% | |
AGTCATGGTTTACCACCACT+TGG | + | chr2.2:11307091-11307110 | MS.gene059304:CDS | 45.0% | |
ATATACCATACCGGGTCGAT+TGG | - | chr2.2:11307610-11307629 | None:intergenic | 45.0% | |
ATCAGTTTAGCCAATCGACC+CGG | + | chr2.2:11307597-11307616 | MS.gene059304:intron | 45.0% | |
ATCCAAGGTCAACACAATGG+TGG | - | chr2.2:11307464-11307483 | None:intergenic | 45.0% | |
ATGTACACTGGTGTGATGAC+AGG | + | chr2.2:11309301-11309320 | MS.gene059304:intron | 45.0% | |
ATTACAACAAAGAGGGGCTG+AGG | + | chr2.2:11307495-11307514 | MS.gene059304:intron | 45.0% | |
CAACCACATCATCACAAAGC+TGG | + | chr2.2:11310911-11310930 | MS.gene059304:CDS | 45.0% | |
CATCGGAGGATGTACTAACT+GGG | + | chr2.2:11312192-11312211 | MS.gene059304:CDS | 45.0% | |
CCAGACCCAATAGCCTTTAT+GGG | + | chr2.2:11312257-11312276 | MS.gene059304:CDS | 45.0% | |
CTCCAGTTTCTTGCCTAACA+AGG | + | chr2.2:11312502-11312521 | MS.gene059304:CDS | 45.0% | |
CTCTCTCTTTCTCCAGGTTA+GGG | + | chr2.2:11310013-11310032 | MS.gene059304:intron | 45.0% | |
CTTCTGCGGCAATTGAAACT+CGG | + | chr2.2:11309773-11309792 | MS.gene059304:intron | 45.0% | |
GAACAGCCCATAAAGGCTAT+TGG | - | chr2.2:11312266-11312285 | None:intergenic | 45.0% | |
GCGGTCAAAGATGATGCTTA+TGG | + | chr2.2:11311201-11311220 | MS.gene059304:CDS | 45.0% | |
GCTAGAACCACCCATAATCA+CGG | + | chr2.2:11307838-11307857 | MS.gene059304:CDS | 45.0% | |
GCTGGAATTTGTAGCTTCTG+CGG | + | chr2.2:11309759-11309778 | MS.gene059304:intron | 45.0% | |
GGATCACTAACTGGGCATTA+AGG | + | chr2.2:11312426-11312445 | MS.gene059304:CDS | 45.0% | |
GGGCTCAAATTCCACATGAA+AGG | + | chr2.2:11312212-11312231 | MS.gene059304:CDS | 45.0% | |
GGTAATCTCTCTCTTTCTCC+AGG | + | chr2.2:11310007-11310026 | MS.gene059304:intron | 45.0% | |
GTATTCACCGTGATTATGGG+TGG | - | chr2.2:11307848-11307867 | None:intergenic | 45.0% | |
GTGGATTTGCAGGACTTCAA+GGG | + | chr2.2:11311541-11311560 | MS.gene059304:CDS | 45.0% | |
GTGTTACAGACAAGAGTCTC+TGG | + | chr2.2:11311027-11311046 | MS.gene059304:intron | 45.0% | |
GTTAGGCAAGAAACTGGAGT+TGG | - | chr2.2:11312501-11312520 | None:intergenic | 45.0% | |
GTTAGGGAAGAAGCTGGAAT+TGG | + | chr2.2:11310029-11310048 | MS.gene059304:intron | 45.0% | |
GTTGTATGGATCAACATCGG+AGG | + | chr2.2:11312178-11312197 | MS.gene059304:CDS | 45.0% | |
TCATCTCACTAAAGCCCTCT+TGG | - | chr2.2:11312070-11312089 | None:intergenic | 45.0% | |
TCTAACAGGAACTCAGCATG+TGG | + | chr2.2:11312598-11312617 | MS.gene059304:intron | 45.0% | |
TCTCTCTCTTTCTCCAGGTT+AGG | + | chr2.2:11310012-11310031 | MS.gene059304:intron | 45.0% | |
TGATTCTGAGCTTCCAGCAT+TGG | + | chr2.2:11307787-11307806 | MS.gene059304:CDS | 45.0% | |
TGCATCCAAGGTCAACACAA+TGG | - | chr2.2:11307467-11307486 | None:intergenic | 45.0% | |
TGGAAACCACTGGTAAAGAG+TGG | + | chr2.2:11312951-11312970 | MS.gene059304:CDS | 45.0% | |
TTACAACAAAGAGGGGCTGA+GGG | + | chr2.2:11307496-11307515 | MS.gene059304:intron | 45.0% | |
TTACCACCATGAGCACCAAA+TGG | + | chr2.2:11307115-11307134 | MS.gene059304:CDS | 45.0% | |
TTGTGGTGAACAGCCCATAA+AGG | - | chr2.2:11312273-11312292 | None:intergenic | 45.0% | |
! | AGTGGATTTGCAGGACTTCA+AGG | + | chr2.2:11311540-11311559 | MS.gene059304:CDS | 45.0% |
! | CGTTTTGTGGCTTCAAAACG+CGG | + | chr2.2:11309631-11309650 | MS.gene059304:intron | 45.0% |
! | GCATGCCCTTTGCATTTTGT+TGG | + | chr2.2:11311122-11311141 | MS.gene059304:CDS | 45.0% |
! | TGTGATGACAGGTTTGGCTT+GGG | + | chr2.2:11309312-11309331 | MS.gene059304:intron | 45.0% |
! | TTCCACCATTGTGTTGACCT+TGG | + | chr2.2:11307459-11307478 | MS.gene059304:intron | 45.0% |
!! | AGGAAGGTTTTGGTATGTGC+AGG | - | chr2.2:11307144-11307163 | None:intergenic | 45.0% |
!! | ATTATGGGTGGTTCTAGCAC+TGG | - | chr2.2:11307836-11307855 | None:intergenic | 45.0% |
!! | TCGTTTGGTTCCACGTTTTG+TGG | + | chr2.2:11309618-11309637 | MS.gene059304:intron | 45.0% |
!!! | CGTTTTGAAGCCACAAAACG+TGG | - | chr2.2:11309631-11309650 | None:intergenic | 45.0% |
AACCAAGAAGCAAGAGGAGG+AGG | - | chr2.2:11307014-11307033 | None:intergenic | 50.0% | |
AAGCAAGAGGCGATCTAGGA+AGG | - | chr2.2:11307160-11307179 | None:intergenic | 50.0% | |
AAGGGTCAAGGCTTCACCAA+TGG | + | chr2.2:11311648-11311667 | MS.gene059304:CDS | 50.0% | |
ACCTAAGCAAGAGGCGATCT+AGG | - | chr2.2:11307164-11307183 | None:intergenic | 50.0% | |
ACTGCTTGGGGTAAACAGGT+GGG | + | chr2.2:11311969-11311988 | MS.gene059304:intron | 50.0% | |
CAACACTGCTTGGGGTAAAC+AGG | + | chr2.2:11311965-11311984 | MS.gene059304:CDS | 50.0% | |
CACTGGTGTGATGACAGGTT+TGG | + | chr2.2:11309306-11309325 | MS.gene059304:intron | 50.0% | |
CAGATCGCCATCCTTTCATG+TGG | - | chr2.2:11312226-11312245 | None:intergenic | 50.0% | |
CATGGTGGTAATCCAAGTGG+TGG | - | chr2.2:11307106-11307125 | None:intergenic | 50.0% | |
CCCATAAAGGCTATTGGGTC+TGG | - | chr2.2:11312260-11312279 | None:intergenic | 50.0% | |
CTCGGTAACCAAGAAGCAAG+AGG | - | chr2.2:11307020-11307039 | None:intergenic | 50.0% | |
CTGCAACTGAAGGCTAAGCA+AGG | - | chr2.2:11309967-11309986 | None:intergenic | 50.0% | |
GAGAGATTACCGAAGCATGC+AGG | - | chr2.2:11309998-11310017 | None:intergenic | 50.0% | |
GCGGCAATTGAAACTCGGTT+TGG | + | chr2.2:11309778-11309797 | MS.gene059304:intron | 50.0% | |
GCTCATGGTGGTAATCCAAG+TGG | - | chr2.2:11307109-11307128 | None:intergenic | 50.0% | |
GGGGTAAACAGGTGGGAAAT+AGG | + | chr2.2:11311976-11311995 | MS.gene059304:intron | 50.0% | |
GGTAACCAAGAAGCAAGAGG+AGG | - | chr2.2:11307017-11307036 | None:intergenic | 50.0% | |
GGTATGTGCAGGAGTCCATT+TGG | - | chr2.2:11307133-11307152 | None:intergenic | 50.0% | |
GTGTGATGACAGGTTTGGCT+TGG | + | chr2.2:11309311-11309330 | MS.gene059304:intron | 50.0% | |
TCCTAGATCGCCTCTTGCTT+AGG | + | chr2.2:11307160-11307179 | MS.gene059304:CDS | 50.0% | |
TTCCAGCTTCTTCCCTAACC+TGG | - | chr2.2:11310028-11310047 | None:intergenic | 50.0% | |
TTGGTTGGGATGGAAACCAC+TGG | + | chr2.2:11312941-11312960 | MS.gene059304:CDS | 50.0% | |
TTTAGCCAATCGACCCGGTA+TGG | + | chr2.2:11307602-11307621 | MS.gene059304:intron | 50.0% | |
! | GAGGCGATCTAGGAAGGTTT+TGG | - | chr2.2:11307154-11307173 | None:intergenic | 50.0% |
! | GCACCAGCTTTGTGATGATG+TGG | - | chr2.2:11310917-11310936 | None:intergenic | 50.0% |
! | GGCTTCCACAAGAGCATAGA+AGG | - | chr2.2:11307951-11307970 | None:intergenic | 50.0% |
! | TCAGCTTGTGGCTTTGCCAA+TGG | + | chr2.2:11311227-11311246 | MS.gene059304:CDS | 50.0% |
!! | AGGAGTCCATTTGGTGCTCA+TGG | - | chr2.2:11307124-11307143 | None:intergenic | 50.0% |
!! | AGTCCATTTGGTGCTCATGG+TGG | - | chr2.2:11307121-11307140 | None:intergenic | 50.0% |
!! | ATGACAGGTTTGGCTTGGGT+AGG | + | chr2.2:11309316-11309335 | MS.gene059304:intron | 50.0% |
!! | TGACAGGTTTGGCTTGGGTA+GGG | + | chr2.2:11309317-11309336 | MS.gene059304:intron | 50.0% |
CACTGCTTGGGGTAAACAGG+TGG | + | chr2.2:11311968-11311987 | MS.gene059304:intron | 55.0% | |
CCAACTACCGGATCCCATGT+AGG | - | chr2.2:11310756-11310775 | None:intergenic | 55.0% | |
CCTACATGGGATCCGGTAGT+TGG | + | chr2.2:11310753-11310772 | MS.gene059304:intron | 55.0% | |
CTCCAGGTTAGGGAAGAAGC+TGG | + | chr2.2:11310023-11310042 | MS.gene059304:intron | 55.0% | |
CTCCTCCTCCTCTTGCTTCT+TGG | + | chr2.2:11307009-11307028 | MS.gene059304:CDS | 55.0% | |
GAGCTGCAACCTGCATGCTT+CGG | + | chr2.2:11309986-11310005 | MS.gene059304:intron | 55.0% | |
GGTTGCAGCTCTGCAACTGA+AGG | - | chr2.2:11309977-11309996 | None:intergenic | 55.0% | |
GTGTGTGTTTGGTATGGCGG+TGG | - | chr2.2:11310552-11310571 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 11306991 | 11312979 | 11306991 | ID=MS.gene059304 |
chr2.2 | mRNA | 11306991 | 11312979 | 11306991 | ID=MS.gene059304.t1;Parent=MS.gene059304 |
chr2.2 | exon | 11306991 | 11307181 | 11306991 | ID=MS.gene059304.t1.exon1;Parent=MS.gene059304.t1 |
chr2.2 | CDS | 11306991 | 11307181 | 11306991 | ID=cds.MS.gene059304.t1;Parent=MS.gene059304.t1 |
chr2.2 | exon | 11307781 | 11308111 | 11307781 | ID=MS.gene059304.t1.exon2;Parent=MS.gene059304.t1 |
chr2.2 | CDS | 11307781 | 11308111 | 11307781 | ID=cds.MS.gene059304.t1;Parent=MS.gene059304.t1 |
chr2.2 | exon | 11309016 | 11309141 | 11309016 | ID=MS.gene059304.t1.exon3;Parent=MS.gene059304.t1 |
chr2.2 | CDS | 11309016 | 11309141 | 11309016 | ID=cds.MS.gene059304.t1;Parent=MS.gene059304.t1 |
chr2.2 | exon | 11310836 | 11310949 | 11310836 | ID=MS.gene059304.t1.exon4;Parent=MS.gene059304.t1 |
chr2.2 | CDS | 11310836 | 11310949 | 11310836 | ID=cds.MS.gene059304.t1;Parent=MS.gene059304.t1 |
chr2.2 | exon | 11311036 | 11311248 | 11311036 | ID=MS.gene059304.t1.exon5;Parent=MS.gene059304.t1 |
chr2.2 | CDS | 11311036 | 11311248 | 11311036 | ID=cds.MS.gene059304.t1;Parent=MS.gene059304.t1 |
chr2.2 | exon | 11311531 | 11311669 | 11311531 | ID=MS.gene059304.t1.exon6;Parent=MS.gene059304.t1 |
chr2.2 | CDS | 11311531 | 11311669 | 11311531 | ID=cds.MS.gene059304.t1;Parent=MS.gene059304.t1 |
chr2.2 | exon | 11311808 | 11311986 | 11311808 | ID=MS.gene059304.t1.exon7;Parent=MS.gene059304.t1 |
chr2.2 | CDS | 11311808 | 11311986 | 11311808 | ID=cds.MS.gene059304.t1;Parent=MS.gene059304.t1 |
chr2.2 | exon | 11312170 | 11312523 | 11312170 | ID=MS.gene059304.t1.exon8;Parent=MS.gene059304.t1 |
chr2.2 | CDS | 11312170 | 11312523 | 11312170 | ID=cds.MS.gene059304.t1;Parent=MS.gene059304.t1 |
chr2.2 | exon | 11312606 | 11312862 | 11312606 | ID=MS.gene059304.t1.exon9;Parent=MS.gene059304.t1 |
chr2.2 | CDS | 11312606 | 11312862 | 11312606 | ID=cds.MS.gene059304.t1;Parent=MS.gene059304.t1 |
chr2.2 | exon | 11312928 | 11312979 | 11312928 | ID=MS.gene059304.t1.exon10;Parent=MS.gene059304.t1 |
chr2.2 | CDS | 11312928 | 11312979 | 11312928 | ID=cds.MS.gene059304.t1;Parent=MS.gene059304.t1 |
Gene Sequence |
Protein sequence |