Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35959.t1 | XP_013445712.1 | 98.7 | 230 | 3 | 0 | 3 | 232 | 109 | 338 | 7.90E-122 | 446.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35959.t1 | A0A072TS94 | 98.7 | 230 | 3 | 0 | 3 | 232 | 109 | 338 | 5.7e-122 | 446.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049389 | MS.gene35959 | 0.804109 | 2.53E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene35959 | 0.835948 | 1.25E-56 | -1.69E-46 |
| MS.gene050670 | MS.gene35959 | 0.800997 | 1.11E-48 | -1.69E-46 |
| MS.gene05105 | MS.gene35959 | 0.803109 | 4.08E-49 | -1.69E-46 |
| MS.gene051360 | MS.gene35959 | 0.814163 | 1.77E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene35959 | 0.81766 | 2.94E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene35959 | 0.816808 | 4.57E-52 | -1.69E-46 |
| MS.gene052340 | MS.gene35959 | 0.815771 | 7.79E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene35959 | 0.835073 | 2.07E-56 | -1.69E-46 |
| MS.gene056407 | MS.gene35959 | 0.838774 | 2.36E-57 | -1.69E-46 |
| MS.gene056410 | MS.gene35959 | 0.824594 | 7.42E-54 | -1.69E-46 |
| MS.gene057448 | MS.gene35959 | 0.814208 | 1.73E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene35959 | 0.827123 | 1.86E-54 | -1.69E-46 |
| MS.gene058082 | MS.gene35959 | 0.810751 | 9.86E-51 | -1.69E-46 |
| MS.gene05811 | MS.gene35959 | 0.825531 | 4.46E-54 | -1.69E-46 |
| MS.gene058293 | MS.gene35959 | 0.821066 | 4.92E-53 | -1.69E-46 |
| MS.gene058700 | MS.gene35959 | 0.814297 | 1.66E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene35959 | 0.841436 | 4.76E-58 | -1.69E-46 |
| MS.gene059597 | MS.gene35959 | 0.811487 | 6.83E-51 | -1.69E-46 |
| MS.gene059676 | MS.gene35959 | 0.863521 | 2.35E-64 | -1.69E-46 |
| MS.gene059688 | MS.gene35959 | 0.817836 | 2.68E-52 | -1.69E-46 |
| MS.gene059692 | MS.gene35959 | 0.837184 | 6.04E-57 | -1.69E-46 |
| MS.gene059695 | MS.gene35959 | 0.837289 | 5.68E-57 | -1.69E-46 |
| MS.gene059974 | MS.gene35959 | 0.810415 | 1.17E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene35959 | 0.800093 | 1.69E-48 | -1.69E-46 |
| MS.gene061051 | MS.gene35959 | -0.806521 | 7.90E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35959.t1 | MTR_8g467540 | 97.845 | 232 | 5 | 0 | 1 | 232 | 107 | 338 | 3.50e-163 | 454 |
| MS.gene35959.t1 | MTR_8g467540 | 97.845 | 232 | 5 | 0 | 1 | 232 | 107 | 338 | 3.50e-163 | 454 |
| MS.gene35959.t1 | MTR_8g467540 | 96.257 | 187 | 7 | 0 | 1 | 187 | 107 | 293 | 2.90e-127 | 362 |
| MS.gene35959.t1 | MTR_1g099420 | 27.027 | 222 | 141 | 4 | 4 | 216 | 131 | 340 | 8.50e-16 | 75.5 |
| MS.gene35959.t1 | MTR_8g099085 | 28.708 | 209 | 130 | 4 | 14 | 216 | 146 | 341 | 2.14e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35959.t1 | AT1G14270 | 71.179 | 229 | 66 | 0 | 3 | 231 | 17 | 245 | 2.52e-120 | 342 |
| MS.gene35959.t1 | AT1G14270 | 72.072 | 222 | 62 | 0 | 10 | 231 | 4 | 225 | 8.06e-119 | 338 |
| MS.gene35959.t1 | AT1G14270 | 72.072 | 222 | 62 | 0 | 10 | 231 | 4 | 225 | 8.06e-119 | 338 |
| MS.gene35959.t1 | AT1G14270 | 71.179 | 229 | 66 | 0 | 3 | 231 | 123 | 351 | 3.37e-118 | 341 |
| MS.gene35959.t1 | AT5G60750 | 36.634 | 101 | 64 | 0 | 116 | 216 | 245 | 345 | 1.06e-14 | 72.4 |
| MS.gene35959.t1 | AT2G20725 | 30.496 | 141 | 92 | 3 | 71 | 210 | 160 | 295 | 2.71e-13 | 68.2 |
Find 59 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTATTAACCTCTCTTTC+TGG | 0.150480 | 8.2:-41575765 | None:intergenic |
| TTATGACGTCCCTAACTAAA+TGG | 0.263174 | 8.2:+41576632 | MS.gene35959:CDS |
| ATAGTCAATACCATTTAGTT+AGG | 0.285869 | 8.2:-41576642 | None:intergenic |
| TGATTGGTTCTTCAAGTATC+AGG | 0.292070 | 8.2:+41576295 | MS.gene35959:CDS |
| CCGGAAGGCTTCTTCAAATA+TGG | 0.295934 | 8.2:+41575425 | MS.gene35959:CDS |
| GTTCGCTTGCTTCCGTTGAT+TGG | 0.314505 | 8.2:+41576279 | MS.gene35959:CDS |
| TTTCCCCAGTTGTTTGTTCT+AGG | 0.316372 | 8.2:+41578087 | MS.gene35959:CDS |
| ATCCATGCGTTCTGGAATTC+AGG | 0.327070 | 8.2:+41579000 | MS.gene35959:CDS |
| TCATCTAGACTTAGCATATC+AGG | 0.332861 | 8.2:-41574472 | None:intergenic |
| CCATATTTGAAGAAGCCTTC+CGG | 0.342881 | 8.2:-41575425 | None:intergenic |
| AATTATTAACCTCTCTTTCT+GGG | 0.349933 | 8.2:-41575764 | None:intergenic |
| CATATTTGAAGAAGCCTTCC+GGG | 0.354286 | 8.2:-41575424 | None:intergenic |
| GCCCTTGCTCATCTCACTCC+TGG | 0.357636 | 8.2:+41578060 | MS.gene35959:CDS |
| CTATCACTATCCATGCGTTC+TGG | 0.361995 | 8.2:+41578992 | MS.gene35959:CDS |
| TGGGCAGGAGTTGGACTTGT+TGG | 0.375501 | 8.2:+41575684 | MS.gene35959:CDS |
| AGAGTTACTCTTTATAGATC+AGG | 0.375744 | 8.2:+41574501 | MS.gene35959:CDS |
| TCATTGTAGCACTGCTTGTT+TGG | 0.385945 | 8.2:+41576552 | MS.gene35959:intron |
| CAAAGAATTATTGCAGAGAT+AGG | 0.389285 | 8.2:+41579385 | MS.gene35959:CDS |
| CAATACCTAGAACAAACAAC+TGG | 0.406876 | 8.2:-41578092 | None:intergenic |
| CTGTCAATCCAATGGCAACT+AGG | 0.408494 | 8.2:-41575710 | None:intergenic |
| GCTTGTTTGGTGGGCATCAC+AGG | 0.412495 | 8.2:+41576565 | MS.gene35959:CDS |
| AAAACTTTGTTGCAGATTTG+AGG | 0.419511 | 8.2:+41575628 | MS.gene35959:intron |
| TCAGGTCGAATTCCTAGATA+TGG | 0.420060 | 8.2:-41574454 | None:intergenic |
| ATTACTTCTCACTGTTCTCC+AGG | 0.428065 | 8.2:+41579029 | MS.gene35959:CDS |
| ATCACAACTGCTGCTGTACT+TGG | 0.428269 | 8.2:+41575365 | MS.gene35959:CDS |
| AAACTTTGTTGCAGATTTGA+GGG | 0.442966 | 8.2:+41575629 | MS.gene35959:intron |
| GCAACAGCTCTACCATATCT+AGG | 0.449313 | 8.2:+41574442 | MS.gene35959:CDS |
| CTAGTTGCCATTGGATTGAC+AGG | 0.461884 | 8.2:+41575711 | MS.gene35959:CDS |
| TATGCTAAGTCTAGATGAAA+AGG | 0.474035 | 8.2:+41574477 | MS.gene35959:CDS |
| TGTAGCACTGCTTGTTTGGT+GGG | 0.474550 | 8.2:+41576556 | MS.gene35959:intron |
| TTGAAGAAGCCTTCCGGGAG+TGG | 0.477325 | 8.2:-41575419 | None:intergenic |
| CAGAACGCATGGATAGTGAT+AGG | 0.480341 | 8.2:-41578991 | None:intergenic |
| GAGTTACTCTTTATAGATCA+GGG | 0.497821 | 8.2:+41574502 | MS.gene35959:CDS |
| TTGTAGCACTGCTTGTTTGG+TGG | 0.499611 | 8.2:+41576555 | MS.gene35959:intron |
| GTTGGTGCCCTAGTTGCCAT+TGG | 0.499917 | 8.2:+41575702 | MS.gene35959:CDS |
| GCACTAAGGATGATAGCAAC+TGG | 0.517625 | 8.2:-41578027 | None:intergenic |
| CAACACTTACCAACCACTCC+CGG | 0.519933 | 8.2:+41575406 | MS.gene35959:CDS |
| TAGTCAATACCATTTAGTTA+GGG | 0.520958 | 8.2:-41576641 | None:intergenic |
| TGTCAATCCAATGGCAACTA+GGG | 0.527968 | 8.2:-41575709 | None:intergenic |
| GGGCAAACACAGCCGCACTA+AGG | 0.529534 | 8.2:-41578041 | None:intergenic |
| CTCCTGAATTCCAGAACGCA+TGG | 0.532129 | 8.2:-41579002 | None:intergenic |
| AAAACTGTCTCCTCAAGAAG+TGG | 0.553996 | 8.2:-41576598 | None:intergenic |
| GGATAGTGATAGGAGTGAGA+AGG | 0.554636 | 8.2:-41578981 | None:intergenic |
| TGGAGAGACCCCAGAAAGAG+AGG | 0.563644 | 8.2:+41575755 | MS.gene35959:CDS |
| AGAAGCCTTCCGGGAGTGGT+TGG | 0.572115 | 8.2:-41575415 | None:intergenic |
| TGTGTTGACAGGTTTGGTTG+AGG | 0.582341 | 8.2:+41574420 | MS.gene35959:intron |
| ATTATTAACCTCTCTTTCTG+GGG | 0.595502 | 8.2:-41575763 | None:intergenic |
| AGGATGATAGCAACTGGTGT+AGG | 0.610354 | 8.2:-41578021 | None:intergenic |
| ACCAGGAGTGAGATGAGCAA+GGG | 0.612598 | 8.2:-41578061 | None:intergenic |
| GCCTATTCTTAGGCGATGGG+AGG | 0.615596 | 8.2:+41573951 | None:intergenic |
| AACAACTGGGGAAATTCACC+AGG | 0.615952 | 8.2:-41578078 | None:intergenic |
| CACCAGGAGTGAGATGAGCA+AGG | 0.617074 | 8.2:-41578062 | None:intergenic |
| AGCAACTCCTGTCAATCCAA+TGG | 0.617534 | 8.2:-41575718 | None:intergenic |
| AATACCTAGAACAAACAACT+GGG | 0.641783 | 8.2:-41578091 | None:intergenic |
| AGTTACTCTTTATAGATCAG+GGG | 0.648024 | 8.2:+41574503 | MS.gene35959:CDS |
| AGTTGCTATCATCCTTAGTG+CGG | 0.655251 | 8.2:+41578029 | MS.gene35959:CDS |
| ACTTACCAACCACTCCCGGA+AGG | 0.660166 | 8.2:+41575410 | MS.gene35959:CDS |
| ATACTTGAAGAACCAATCAA+CGG | 0.661571 | 8.2:-41576291 | None:intergenic |
| ATACCTAGAACAAACAACTG+GGG | 0.720843 | 8.2:-41578090 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTATTATTATTATTATT+TGG | + | chr8.2:41575338-41575357 | MS.gene35959:intron | 0.0% |
| !! | AAAATTTATTAAGAAATTAC+AGG | - | chr8.2:41576705-41576724 | None:intergenic | 10.0% |
| !! | AAATTTATTAAGAAATTACA+GGG | - | chr8.2:41576704-41576723 | None:intergenic | 10.0% |
| !!! | AATGAATATATGTTTTTTTT+TGG | - | chr8.2:41578463-41578482 | None:intergenic | 10.0% |
| !!! | ATGAATATATGTTTTTTTTT+GGG | - | chr8.2:41578462-41578481 | None:intergenic | 10.0% |
| !!! | TTTTGAATTAGATATTTAAT+GGG | + | chr8.2:41576811-41576830 | MS.gene35959:intron | 10.0% |
| !!! | TTTTTGAATTAGATATTTAA+TGG | + | chr8.2:41576810-41576829 | MS.gene35959:intron | 10.0% |
| !! | AAAATCAAAAACATGAAAAT+GGG | + | chr8.2:41578828-41578847 | MS.gene35959:intron | 15.0% |
| !! | AAATTGAAAATTATTAGGTA+CGG | - | chr8.2:41575258-41575277 | None:intergenic | 15.0% |
| !! | ACAGAAAATTGAAAATTATT+AGG | - | chr8.2:41575263-41575282 | None:intergenic | 15.0% |
| !! | ACATAAATGTAATTCTTATT+TGG | + | chr8.2:41575810-41575829 | MS.gene35959:intron | 15.0% |
| !! | AGTAATCTTAAAAAGAAAAA+AGG | - | chr8.2:41576169-41576188 | None:intergenic | 15.0% |
| !! | TAAAATCAAAAACATGAAAA+TGG | + | chr8.2:41578827-41578846 | MS.gene35959:intron | 15.0% |
| !!! | AAGTTTCATATATAATTTTC+GGG | + | chr8.2:41578206-41578225 | MS.gene35959:intron | 15.0% |
| !!! | AGTATTTTGATATAATTTCT+AGG | - | chr8.2:41578545-41578564 | None:intergenic | 15.0% |
| !!! | CAAGTTTCATATATAATTTT+CGG | + | chr8.2:41578205-41578224 | MS.gene35959:intron | 15.0% |
| !!! | CATAAATGTAATTCTTATTT+GGG | + | chr8.2:41575811-41575830 | MS.gene35959:intron | 15.0% |
| !!! | GTATTTTGATATAATTTCTA+GGG | - | chr8.2:41578544-41578563 | None:intergenic | 15.0% |
| !!! | TAATTTTTGTGATTAACAAT+TGG | + | chr8.2:41576411-41576430 | MS.gene35959:intron | 15.0% |
| !!! | TATATATGAAACTTGTTTAT+TGG | - | chr8.2:41578200-41578219 | None:intergenic | 15.0% |
| !!! | TATCATTTTCTTTTAACTTT+AGG | + | chr8.2:41575146-41575165 | MS.gene35959:intron | 15.0% |
| !!! | TGAATATATGTTTTTTTTTG+GGG | - | chr8.2:41578461-41578480 | None:intergenic | 15.0% |
| !! | AAAACAAGGAAAAATATCTA+AGG | + | chr8.2:41578270-41578289 | MS.gene35959:intron | 20.0% |
| !! | AAACCTTATAAGAACTAAAA+AGG | - | chr8.2:41575992-41576011 | None:intergenic | 20.0% |
| !! | AATGAAGTGAAATAAAAATG+TGG | - | chr8.2:41574591-41574610 | None:intergenic | 20.0% |
| !! | AATGCATTATATGAAATTCA+TGG | + | chr8.2:41575294-41575313 | MS.gene35959:intron | 20.0% |
| !! | AATGTACAAATATTGAACAA+GGG | + | chr8.2:41578238-41578257 | MS.gene35959:intron | 20.0% |
| !! | ATTTATCTTAGATCATTCAA+AGG | + | chr8.2:41575784-41575803 | MS.gene35959:intron | 20.0% |
| !! | CTGTTCTAATCTTAAAAATT+GGG | + | chr8.2:41578518-41578537 | MS.gene35959:intron | 20.0% |
| !! | GATACTTTATAACTATATCA+TGG | + | chr8.2:41577597-41577616 | MS.gene35959:intron | 20.0% |
| !! | GGTCATGTTTATTATTTATT+CGG | - | chr8.2:41577625-41577644 | None:intergenic | 20.0% |
| !! | GTTTCTTTAACCAATATATA+TGG | - | chr8.2:41576755-41576774 | None:intergenic | 20.0% |
| !! | TAGTGATATTACTTCAATAA+TGG | + | chr8.2:41575879-41575898 | MS.gene35959:intron | 20.0% |
| !! | TCAAAAATTGCAAAAGAAAA+CGG | + | chr8.2:41578758-41578777 | MS.gene35959:intron | 20.0% |
| !! | TCTAACACAATAATTGAATA+AGG | + | chr8.2:41577004-41577023 | MS.gene35959:intron | 20.0% |
| !! | TTCACTAAATATTCAAAATG+TGG | + | chr8.2:41577854-41577873 | MS.gene35959:intron | 20.0% |
| !!! | AATATATGTTTTTTTTTGGG+GGG | - | chr8.2:41578459-41578478 | None:intergenic | 20.0% |
| !!! | AATTTTATTGCTTTTTGTGT+CGG | + | chr8.2:41577878-41577897 | MS.gene35959:intron | 20.0% |
| !!! | ATATATTCATTTTAGAAGCA+GGG | + | chr8.2:41578472-41578491 | MS.gene35959:intron | 20.0% |
| !!! | ATATTGAAGTTGTTAGATTT+TGG | - | chr8.2:41576060-41576079 | None:intergenic | 20.0% |
| !!! | CAATTTTTAAGATTAGAACA+GGG | - | chr8.2:41578519-41578538 | None:intergenic | 20.0% |
| !!! | CATTTTTATTTCACTTCATT+TGG | + | chr8.2:41574591-41574610 | MS.gene35959:intron | 20.0% |
| !!! | GAATATATGTTTTTTTTTGG+GGG | - | chr8.2:41578460-41578479 | None:intergenic | 20.0% |
| !!! | GCATATTTTTTTTTCTTGAA+CGG | + | chr8.2:41578322-41578341 | MS.gene35959:intron | 20.0% |
| !!! | TATTGTCTTTGTTTTTTAGA+AGG | + | chr8.2:41578110-41578129 | MS.gene35959:intron | 20.0% |
| ! | AAAAACCTGTTTAACAAACA+AGG | - | chr8.2:41577546-41577565 | None:intergenic | 25.0% |
| ! | AAAGAAAATAATCAGTAGTC+TGG | - | chr8.2:41575095-41575114 | None:intergenic | 25.0% |
| ! | AAAGAATTATTGCAGAGATA+GGG | + | chr8.2:41579386-41579405 | MS.gene35959:CDS | 25.0% |
| ! | AAATTATTAACCTCTCTTTC+TGG | - | chr8.2:41575768-41575787 | None:intergenic | 25.0% |
| ! | AATCATAATTCTCCTATCAA+TGG | + | chr8.2:41576450-41576469 | MS.gene35959:intron | 25.0% |
| ! | AATGATATGAAATCTCTATC+TGG | - | chr8.2:41574958-41574977 | None:intergenic | 25.0% |
| ! | AATTATTAACCTCTCTTTCT+GGG | - | chr8.2:41575767-41575786 | None:intergenic | 25.0% |
| ! | ACAGTCACTCTTAAATATAT+AGG | + | chr8.2:41574854-41574873 | MS.gene35959:intron | 25.0% |
| ! | ATAATGTTATACAGTATACC+TGG | - | chr8.2:41579050-41579069 | None:intergenic | 25.0% |
| ! | ATACTTTCATTGTTTCAAGA+TGG | - | chr8.2:41575217-41575236 | None:intergenic | 25.0% |
| ! | ATAGTCAATACCATTTAGTT+AGG | - | chr8.2:41576645-41576664 | None:intergenic | 25.0% |
| ! | ATGTACAAATATTGAACAAG+GGG | + | chr8.2:41578239-41578258 | MS.gene35959:intron | 25.0% |
| ! | CATGGAAAGTAATTATAACA+CGG | - | chr8.2:41574361-41574380 | None:intergenic | 25.0% |
| ! | CCTGTTCTAATCTTAAAAAT+TGG | + | chr8.2:41578517-41578536 | MS.gene35959:intron | 25.0% |
| ! | CTTAAATATATAGGTGCTTA+TGG | + | chr8.2:41574863-41574882 | MS.gene35959:intron | 25.0% |
| ! | GAATGTACAAATATTGAACA+AGG | + | chr8.2:41578237-41578256 | MS.gene35959:intron | 25.0% |
| ! | GGTTTCATTTCCATATATAT+TGG | + | chr8.2:41576742-41576761 | MS.gene35959:intron | 25.0% |
| ! | GTAGTAATGCAAATATACTT+GGG | + | chr8.2:41574077-41574096 | MS.gene35959:intron | 25.0% |
| ! | GTGATTGTATAAACCATAAA+AGG | + | chr8.2:41577705-41577724 | MS.gene35959:intron | 25.0% |
| ! | TAAATTAATGGCTCAAACTT+AGG | - | chr8.2:41574386-41574405 | None:intergenic | 25.0% |
| ! | TAGATAATTCATAACACGAT+AGG | - | chr8.2:41576105-41576124 | None:intergenic | 25.0% |
| ! | TAGTCAATACCATTTAGTTA+GGG | - | chr8.2:41576644-41576663 | None:intergenic | 25.0% |
| ! | TATGCAAAACAAGAATAGTT+GGG | - | chr8.2:41576906-41576925 | None:intergenic | 25.0% |
| ! | TCAAGTTAGTATTTGCAATT+AGG | + | chr8.2:41579300-41579319 | MS.gene35959:intron | 25.0% |
| ! | TGAATTATTCATTGTTACCA+GGG | + | chr8.2:41577958-41577977 | MS.gene35959:intron | 25.0% |
| ! | TGCAAATACTAACTTGATTT+GGG | - | chr8.2:41579297-41579316 | None:intergenic | 25.0% |
| ! | TGTAGTAATGCAAATATACT+TGG | + | chr8.2:41574076-41574095 | MS.gene35959:intron | 25.0% |
| ! | TTATGCAAAACAAGAATAGT+TGG | - | chr8.2:41576907-41576926 | None:intergenic | 25.0% |
| ! | TTGCAAATACTAACTTGATT+TGG | - | chr8.2:41579298-41579317 | None:intergenic | 25.0% |
| !! | AAACAATGATATCAGTGTTT+TGG | + | chr8.2:41578701-41578720 | MS.gene35959:intron | 25.0% |
| !! | AATATGTGAAGATGACATTT+TGG | + | chr8.2:41574711-41574730 | MS.gene35959:intron | 25.0% |
| !! | AATTTTGTGACATCTTTTCT+AGG | + | chr8.2:41578922-41578941 | MS.gene35959:intron | 25.0% |
| !! | ATTATGTGAAGATGACATTT+TGG | + | chr8.2:41574630-41574649 | MS.gene35959:intron | 25.0% |
| !! | ATTTTGTGACATCTTTTCTA+GGG | + | chr8.2:41578923-41578942 | MS.gene35959:intron | 25.0% |
| !! | CAAATAAAGTACCAAAATCT+GGG | + | chr8.2:41578575-41578594 | MS.gene35959:intron | 25.0% |
| !! | GAACCTTTTAATCTTCAAAA+GGG | + | chr8.2:41575651-41575670 | MS.gene35959:CDS | 25.0% |
| !! | TTCAAGTATCAGGTATTTTA+AGG | + | chr8.2:41576305-41576324 | MS.gene35959:intron | 25.0% |
| !! | TTGTCAAAACGTTTTCATTT+AGG | + | chr8.2:41576484-41576503 | MS.gene35959:intron | 25.0% |
| !! | TTTATGAGTTTTTAACCTTG+TGG | + | chr8.2:41576209-41576228 | MS.gene35959:intron | 25.0% |
| !!! | ATATATGTTTTTTTTTGGGG+GGG | - | chr8.2:41578458-41578477 | None:intergenic | 25.0% |
| !!! | CATATATTCATTTTAGAAGC+AGG | + | chr8.2:41578471-41578490 | MS.gene35959:intron | 25.0% |
| !!! | CCAATTTTTAAGATTAGAAC+AGG | - | chr8.2:41578520-41578539 | None:intergenic | 25.0% |
| !!! | GGTCTTTAAAATGTTTAAGA+AGG | - | chr8.2:41578498-41578517 | None:intergenic | 25.0% |
| !!! | TAGCCTTTTTAGTTCTTATA+AGG | + | chr8.2:41575986-41576005 | MS.gene35959:intron | 25.0% |
| !!! | TTGGGTTAAATGTTTTTAGT+GGG | + | chr8.2:41575829-41575848 | MS.gene35959:intron | 25.0% |
| !!! | TTGGTGTTGATGTTAATAAA+AGG | + | chr8.2:41576974-41576993 | MS.gene35959:intron | 25.0% |
| !!! | TTTGGGTTAAATGTTTTTAG+TGG | + | chr8.2:41575828-41575847 | MS.gene35959:intron | 25.0% |
| !!! | TTTTTTTGCTCTTGACTTTT+TGG | + | chr8.2:41576721-41576740 | MS.gene35959:intron | 25.0% |
| AAAACTTTGTTGCAGATTTG+AGG | + | chr8.2:41575628-41575647 | MS.gene35959:intron | 30.0% | |
| AAACATAAACAACTAAAGCG+AGG | - | chr8.2:41577936-41577955 | None:intergenic | 30.0% | |
| AAACTTTGTTGCAGATTTGA+GGG | + | chr8.2:41575629-41575648 | MS.gene35959:intron | 30.0% | |
| AAAGAAAACGGTGAGAAAAA+CGG | + | chr8.2:41578770-41578789 | MS.gene35959:intron | 30.0% | |
| AACTCCTGACAAAATGTTTA+AGG | - | chr8.2:41577471-41577490 | None:intergenic | 30.0% | |
| AATACCTAGAACAAACAACT+GGG | - | chr8.2:41578094-41578113 | None:intergenic | 30.0% | |
| AATACTGAGGAATGTGAATT+GGG | + | chr8.2:41577179-41577198 | MS.gene35959:intron | 30.0% | |
| AATCATTAAGTCAGAATCGT+TGG | + | chr8.2:41579135-41579154 | MS.gene35959:intron | 30.0% | |
| AATTGTTGGATGAAATAGGA+TGG | - | chr8.2:41579211-41579230 | None:intergenic | 30.0% | |
| ACACAAAATTTCATTCTCTG+AGG | + | chr8.2:41577378-41577397 | MS.gene35959:intron | 30.0% | |
| AGAGTTACTCTTTATAGATC+AGG | + | chr8.2:41574501-41574520 | MS.gene35959:CDS | 30.0% | |
| AGGTTCCTTATTGTTAATTG+TGG | + | chr8.2:41576333-41576352 | MS.gene35959:intron | 30.0% | |
| AGTCTGGATAAACTTCTATA+TGG | - | chr8.2:41575079-41575098 | None:intergenic | 30.0% | |
| AGTTACTCTTTATAGATCAG+GGG | + | chr8.2:41574503-41574522 | MS.gene35959:CDS | 30.0% | |
| ATAATTCATAACACGATAGG+AGG | - | chr8.2:41576102-41576121 | None:intergenic | 30.0% | |
| ATAATTGAAACCATCCAACT+TGG | + | chr8.2:41577100-41577119 | MS.gene35959:intron | 30.0% | |
| ATACTTGAAGAACCAATCAA+CGG | - | chr8.2:41576294-41576313 | None:intergenic | 30.0% | |
| ATCTAGTTGAATCCATACAT+AGG | - | chr8.2:41575194-41575213 | None:intergenic | 30.0% | |
| ATGCAAAACAAGAATAGTTG+GGG | - | chr8.2:41576905-41576924 | None:intergenic | 30.0% | |
| ATTATTAACCTCTCTTTCTG+GGG | - | chr8.2:41575766-41575785 | None:intergenic | 30.0% | |
| ATTCTTCTTTCTCCATTGAT+AGG | - | chr8.2:41576465-41576484 | None:intergenic | 30.0% | |
| ATTGGGATTTCGAATCATTA+CGG | + | chr8.2:41579089-41579108 | MS.gene35959:intron | 30.0% | |
| CAAAGAATTATTGCAGAGAT+AGG | + | chr8.2:41579385-41579404 | MS.gene35959:CDS | 30.0% | |
| CAAAGCCACAATTAACAATA+AGG | - | chr8.2:41576341-41576360 | None:intergenic | 30.0% | |
| CTTAAAGGAGAAGATCTATA+TGG | - | chr8.2:41577790-41577809 | None:intergenic | 30.0% | |
| GAACACAAAATGAAGATATC+AGG | - | chr8.2:41574325-41574344 | None:intergenic | 30.0% | |
| GAGTTACTCTTTATAGATCA+GGG | + | chr8.2:41574502-41574521 | MS.gene35959:CDS | 30.0% | |
| GTGAATTATTCATTGTTACC+AGG | + | chr8.2:41577957-41577976 | MS.gene35959:intron | 30.0% | |
| TACAGGGAACTAAATGTAAA+AGG | - | chr8.2:41576688-41576707 | None:intergenic | 30.0% | |
| TATGCTAAGTCTAGATGAAA+AGG | + | chr8.2:41574477-41574496 | MS.gene35959:CDS | 30.0% | |
| TCGTTATTAATCTCATTGCA+GGG | + | chr8.2:41577996-41578015 | MS.gene35959:intron | 30.0% | |
| TGAGCAATAATTGAAGCAAA+AGG | - | chr8.2:41577817-41577836 | None:intergenic | 30.0% | |
| TGCAACTGTGTATAAAATCA+GGG | - | chr8.2:41579353-41579372 | None:intergenic | 30.0% | |
| TGTACAAATATTGAACAAGG+GGG | + | chr8.2:41578240-41578259 | MS.gene35959:intron | 30.0% | |
| TTATACAATCACCATGAGTT+TGG | - | chr8.2:41577697-41577716 | None:intergenic | 30.0% | |
| TTCGTTATTAATCTCATTGC+AGG | + | chr8.2:41577995-41578014 | MS.gene35959:intron | 30.0% | |
| TTGCAACTGTGTATAAAATC+AGG | - | chr8.2:41579354-41579373 | None:intergenic | 30.0% | |
| TTGGAATTGTTGGATGAAAT+AGG | - | chr8.2:41579215-41579234 | None:intergenic | 30.0% | |
| TTTATTGTTCAGTTTGCAAC+TGG | + | chr8.2:41575546-41575565 | MS.gene35959:intron | 30.0% | |
| ! | AAAATGTGGAAGTTGTTTCA+CGG | - | chr8.2:41574658-41574677 | None:intergenic | 30.0% |
| ! | AACTAGTTTGAGCTAAGTAA+GGG | - | chr8.2:41578425-41578444 | None:intergenic | 30.0% |
| ! | ACAAAGTTTTTACCGTTGAA+TGG | - | chr8.2:41575618-41575637 | None:intergenic | 30.0% |
| ! | ACATTTTTGTCTCTTGCATA+TGG | + | chr8.2:41577491-41577510 | MS.gene35959:intron | 30.0% |
| ! | ACCTTTCAAGCCTATTTTAT+GGG | + | chr8.2:41576023-41576042 | MS.gene35959:intron | 30.0% |
| ! | AGGTCACAAAAATCCTTTTA+TGG | - | chr8.2:41577721-41577740 | None:intergenic | 30.0% |
| ! | ATTTTTCTTGAGTTTCCATC+AGG | + | chr8.2:41577437-41577456 | MS.gene35959:intron | 30.0% |
| ! | CATATGGAGAAAATTTGCTT+GGG | + | chr8.2:41577507-41577526 | MS.gene35959:intron | 30.0% |
| ! | CCAAATAAAGTACCAAAATC+TGG | + | chr8.2:41578574-41578593 | MS.gene35959:intron | 30.0% |
| ! | CTTTTAATCTTCAAAAGGGT+TGG | + | chr8.2:41575655-41575674 | MS.gene35959:CDS | 30.0% |
| ! | GCTAGATGCATTAAGTTTTT+AGG | + | chr8.2:41575040-41575059 | MS.gene35959:intron | 30.0% |
| ! | GGAACCTTTTAATCTTCAAA+AGG | + | chr8.2:41575650-41575669 | MS.gene35959:CDS | 30.0% |
| ! | TCACAATAAGTTGGAATTGT+TGG | - | chr8.2:41579225-41579244 | None:intergenic | 30.0% |
| ! | TGATTTTATACACAGTTGCA+AGG | + | chr8.2:41579353-41579372 | MS.gene35959:intron | 30.0% |
| ! | TTTTTCTTGAGTTTCCATCA+GGG | + | chr8.2:41577438-41577457 | MS.gene35959:intron | 30.0% |
| !! | ATGTGTTGCTAGTCTTTATT+GGG | + | chr8.2:41579072-41579091 | MS.gene35959:intron | 30.0% |
| !! | CAACCCTTTTGAAGATTAAA+AGG | - | chr8.2:41575657-41575676 | None:intergenic | 30.0% |
| !! | CCAGATTTTGGTACTTTATT+TGG | - | chr8.2:41578577-41578596 | None:intergenic | 30.0% |
| !! | GACAACTGATATTTTAAGCA+TGG | + | chr8.2:41579168-41579187 | MS.gene35959:intron | 30.0% |
| !! | TCAATAATGGTTCTAAGTAG+TGG | + | chr8.2:41575892-41575911 | MS.gene35959:intron | 30.0% |
| !! | TGTTTTAGATACACAGTAGA+TGG | - | chr8.2:41578898-41578917 | None:intergenic | 30.0% |
| !!! | GGAAAGTTTTTTAGCATAGA+AGG | + | chr8.2:41577267-41577286 | MS.gene35959:intron | 30.0% |
| !!! | TAGTTTTTTCTCCTTTGTTC+AGG | + | chr8.2:41578371-41578390 | MS.gene35959:intron | 30.0% |
| !!! | TCAGGTATTTTAAGGTATCT+AGG | + | chr8.2:41576313-41576332 | MS.gene35959:intron | 30.0% |
| !!! | TTTTTGTGTCGGTTATTTAG+AGG | + | chr8.2:41577889-41577908 | MS.gene35959:intron | 30.0% |
| AAATTATTAGGTACGGACAG+TGG | - | chr8.2:41575251-41575270 | None:intergenic | 35.0% | |
| AACCTGTTTAACAAACAAGG+TGG | - | chr8.2:41577543-41577562 | None:intergenic | 35.0% | |
| AATCACCATGAGTTTGGTTA+GGG | - | chr8.2:41577691-41577710 | None:intergenic | 35.0% | |
| AATGTGAATTGGGATCAACA+TGG | + | chr8.2:41577189-41577208 | MS.gene35959:intron | 35.0% | |
| ACAAAAGAACACGAGTTTGT+TGG | + | chr8.2:41576955-41576974 | MS.gene35959:intron | 35.0% | |
| ACCCATAAAATAGGCTTGAA+AGG | - | chr8.2:41576027-41576046 | None:intergenic | 35.0% | |
| ACCTGTTTAACAAACAAGGT+GGG | - | chr8.2:41577542-41577561 | None:intergenic | 35.0% | |
| ACTGCCTGGGAATAAATTAA+TGG | - | chr8.2:41574398-41574417 | None:intergenic | 35.0% | |
| AGAAAAAAGTCTCACTTGTG+AGG | - | chr8.2:41576786-41576805 | None:intergenic | 35.0% | |
| AGAGGAAAAGTGATTACTCT+TGG | + | chr8.2:41577907-41577926 | MS.gene35959:intron | 35.0% | |
| AGTCACTTGCTTGAAAATCT+GGG | - | chr8.2:41576518-41576537 | None:intergenic | 35.0% | |
| ATACCTAGAACAAACAACTG+GGG | - | chr8.2:41578093-41578112 | None:intergenic | 35.0% | |
| ATGTGAATTGGGATCAACAT+GGG | + | chr8.2:41577190-41577209 | MS.gene35959:intron | 35.0% | |
| ATTCACATTCCTCAGTATTC+AGG | - | chr8.2:41577178-41577197 | None:intergenic | 35.0% | |
| CAATACCTAGAACAAACAAC+TGG | - | chr8.2:41578095-41578114 | None:intergenic | 35.0% | |
| CTAAAGATAAAGCAGTAGTC+TGG | - | chr8.2:41574992-41575011 | None:intergenic | 35.0% | |
| GAATACTGAGGAATGTGAAT+TGG | + | chr8.2:41577178-41577197 | MS.gene35959:intron | 35.0% | |
| GCAACTGTGTATAAAATCAG+GGG | - | chr8.2:41579352-41579371 | None:intergenic | 35.0% | |
| GCAATAATTGAAGCAAAAGG+TGG | - | chr8.2:41577814-41577833 | None:intergenic | 35.0% | |
| TAAAATAGGCTTGAAAGGTG+AGG | - | chr8.2:41576022-41576041 | None:intergenic | 35.0% | |
| TCATCTAGACTTAGCATATC+AGG | - | chr8.2:41574475-41574494 | None:intergenic | 35.0% | |
| TGAGCCATTAATTTATTCCC+AGG | + | chr8.2:41574391-41574410 | MS.gene35959:intron | 35.0% | |
| TGATGCTTACTTCCATTCAA+CGG | + | chr8.2:41575603-41575622 | MS.gene35959:intron | 35.0% | |
| TGCAAAACAAGAATAGTTGG+GGG | - | chr8.2:41576904-41576923 | None:intergenic | 35.0% | |
| TTATGACGTCCCTAACTAAA+TGG | + | chr8.2:41576632-41576651 | MS.gene35959:CDS | 35.0% | |
| TTCACATTCCTCAGTATTCA+GGG | - | chr8.2:41577177-41577196 | None:intergenic | 35.0% | |
| TTTGAGCTAAGTAAGGGATA+AGG | - | chr8.2:41578419-41578438 | None:intergenic | 35.0% | |
| ! | AAATGTGGAAGTTGTTTCAC+GGG | - | chr8.2:41574657-41574676 | None:intergenic | 35.0% |
| ! | ACTAGCTCTTAAAATCACCA+AGG | - | chr8.2:41577406-41577425 | None:intergenic | 35.0% |
| ! | ACTGACTCAACCCATAAAAT+AGG | - | chr8.2:41576036-41576055 | None:intergenic | 35.0% |
| ! | CAACTAGTTTGAGCTAAGTA+AGG | - | chr8.2:41578426-41578445 | None:intergenic | 35.0% |
| ! | CACCTTTCAAGCCTATTTTA+TGG | + | chr8.2:41576022-41576041 | MS.gene35959:intron | 35.0% |
| ! | CTTACAAGTCAGTTTTTGTG+AGG | + | chr8.2:41575933-41575952 | MS.gene35959:intron | 35.0% |
| ! | GAATGAGAAAATTTTTGCCC+TGG | - | chr8.2:41577978-41577997 | None:intergenic | 35.0% |
| ! | GCATATGGAGAAAATTTGCT+TGG | + | chr8.2:41577506-41577525 | MS.gene35959:intron | 35.0% |
| ! | TAAAGTATCCACTGCCATTT+AGG | - | chr8.2:41577586-41577605 | None:intergenic | 35.0% |
| ! | TGATTGGTTCTTCAAGTATC+AGG | + | chr8.2:41576295-41576314 | MS.gene35959:CDS | 35.0% |
| ! | TTAACTAGTTGGCCTATGTA+TGG | + | chr8.2:41575179-41575198 | MS.gene35959:intron | 35.0% |
| ! | TTGCTTGAAAATCTGGGATA+TGG | - | chr8.2:41576512-41576531 | None:intergenic | 35.0% |
| ! | TTTTTCATGATCTGCGATTG+AGG | + | chr8.2:41574262-41574281 | MS.gene35959:intron | 35.0% |
| !! | AAAACTGACTTGTAAGGTGA+AGG | - | chr8.2:41575929-41575948 | None:intergenic | 35.0% |
| !! | AAACTGACTTGTAAGGTGAA+GGG | - | chr8.2:41575928-41575947 | None:intergenic | 35.0% |
| !! | AGGAAGTTAGGTTGTTTTGT+AGG | - | chr8.2:41577741-41577760 | None:intergenic | 35.0% |
| !! | CATGTGTTGCTAGTCTTTAT+TGG | + | chr8.2:41579071-41579090 | MS.gene35959:intron | 35.0% |
| !! | CATTTGGTCATTGACTTGTT+AGG | + | chr8.2:41574607-41574626 | MS.gene35959:intron | 35.0% |
| !! | CTCACAAAAACTGACTTGTA+AGG | - | chr8.2:41575935-41575954 | None:intergenic | 35.0% |
| !!! | AAATGTTTTTAGTGGGTGTG+AGG | + | chr8.2:41575836-41575855 | MS.gene35959:intron | 35.0% |
| AAAACTGTCTCCTCAAGAAG+TGG | - | chr8.2:41576601-41576620 | None:intergenic | 40.0% | |
| AACATCTCTTGCTTGTGGAT+TGG | + | chr8.2:41574002-41574021 | MS.gene35959:intron | 40.0% | |
| AACCACCTAAAGTTGTTGCT+TGG | - | chr8.2:41577764-41577783 | None:intergenic | 40.0% | |
| AAGTTCACTTTGCAGCTTGT+TGG | + | chr8.2:41575523-41575542 | MS.gene35959:intron | 40.0% | |
| ACAGTTTCCTCACTCCTAAA+TGG | + | chr8.2:41577569-41577588 | MS.gene35959:intron | 40.0% | |
| ACATCTCTTGCTTGTGGATT+GGG | + | chr8.2:41574003-41574022 | MS.gene35959:intron | 40.0% | |
| ACGATAGAAATCCCTACTGT+CGG | - | chr8.2:41579261-41579280 | None:intergenic | 40.0% | |
| ACTACACTATAGCACCTCTT+TGG | - | chr8.2:41574122-41574141 | None:intergenic | 40.0% | |
| ACTGCAACTATCTGCAAGTT+TGG | - | chr8.2:41576385-41576404 | None:intergenic | 40.0% | |
| AGCACAATTCATTACGACAG+AGG | - | chr8.2:41577646-41577665 | None:intergenic | 40.0% | |
| AGCACACACTCACAATAAGT+TGG | - | chr8.2:41579234-41579253 | None:intergenic | 40.0% | |
| AGTTGCTATCATCCTTAGTG+CGG | + | chr8.2:41578029-41578048 | MS.gene35959:CDS | 40.0% | |
| ATAGGATGGCTCATGATTTC+AGG | - | chr8.2:41579197-41579216 | None:intergenic | 40.0% | |
| ATGGCTCAAACTTAGGAACA+TGG | - | chr8.2:41574379-41574398 | None:intergenic | 40.0% | |
| ATTACTTCTCACTGTTCTCC+AGG | + | chr8.2:41579029-41579048 | MS.gene35959:CDS | 40.0% | |
| CAATCACCATGAGTTTGGTT+AGG | - | chr8.2:41577692-41577711 | None:intergenic | 40.0% | |
| CAGAATCGTTGGATGAAGAT+CGG | + | chr8.2:41579146-41579165 | MS.gene35959:intron | 40.0% | |
| CAGTCACTTGCTTGAAAATC+TGG | - | chr8.2:41576519-41576538 | None:intergenic | 40.0% | |
| CATATTTGAAGAAGCCTTCC+GGG | - | chr8.2:41575427-41575446 | None:intergenic | 40.0% | |
| CCATATTTGAAGAAGCCTTC+CGG | - | chr8.2:41575428-41575447 | None:intergenic | 40.0% | |
| CTAAGTAAGGGATAAGGAGT+TGG | - | chr8.2:41578413-41578432 | None:intergenic | 40.0% | |
| CTCGCACTCAGAAATATAAG+AGG | - | chr8.2:41574808-41574827 | None:intergenic | 40.0% | |
| CTCTTTATAGATCAGGGGTA+TGG | + | chr8.2:41574508-41574527 | MS.gene35959:intron | 40.0% | |
| CTGGACAAATTTGGTCTAGA+TGG | + | chr8.2:41577213-41577232 | MS.gene35959:intron | 40.0% | |
| GCCAACTAGTTAAAGAGACA+AGG | - | chr8.2:41575172-41575191 | None:intergenic | 40.0% | |
| GCCTTGTCTCTTTAACTAGT+TGG | + | chr8.2:41575168-41575187 | MS.gene35959:intron | 40.0% | |
| GGATTTCTATCGTGCTTTAC+TGG | + | chr8.2:41579268-41579287 | MS.gene35959:intron | 40.0% | |
| TAGCATAGAAGGTAAACTGC+AGG | + | chr8.2:41577278-41577297 | MS.gene35959:intron | 40.0% | |
| TCACTAACATCTCTTGCTTG+TGG | + | chr8.2:41573997-41574016 | MS.gene35959:intron | 40.0% | |
| TCAGGTCGAATTCCTAGATA+TGG | - | chr8.2:41574457-41574476 | None:intergenic | 40.0% | |
| TCATTGTAGCACTGCTTGTT+TGG | + | chr8.2:41576552-41576571 | MS.gene35959:intron | 40.0% | |
| TGGGCAGTAATGTCAAATAG+CGG | + | chr8.2:41574096-41574115 | MS.gene35959:intron | 40.0% | |
| TGGGGTCTCTCCATTAAAAA+AGG | - | chr8.2:41575748-41575767 | None:intergenic | 40.0% | |
| TGTCAATCCAATGGCAACTA+GGG | - | chr8.2:41575712-41575731 | None:intergenic | 40.0% | |
| TGTCTAAGTCTGTGCTTCAT+AGG | + | chr8.2:41577068-41577087 | MS.gene35959:intron | 40.0% | |
| TTCATAACACGATAGGAGGT+TGG | - | chr8.2:41576098-41576117 | None:intergenic | 40.0% | |
| TTCCTCCAAGCAACAACTTT+AGG | + | chr8.2:41577756-41577775 | MS.gene35959:intron | 40.0% | |
| TTGATGCTCTAATGCCAAGT+TGG | - | chr8.2:41577117-41577136 | None:intergenic | 40.0% | |
| TTTCCCCAGTTGTTTGTTCT+AGG | + | chr8.2:41578087-41578106 | MS.gene35959:CDS | 40.0% | |
| ! | ATGGAGAAAATTTGCTTGGG+AGG | + | chr8.2:41577510-41577529 | MS.gene35959:intron | 40.0% |
| ! | CGACTCAAGCATTGTAATTC+TGG | + | chr8.2:41574540-41574559 | MS.gene35959:intron | 40.0% |
| ! | CTCTTATATTTCTGAGTGCG+AGG | + | chr8.2:41574806-41574825 | MS.gene35959:intron | 40.0% |
| ! | CTCTTTGCTGTCATCAATGA+AGG | + | chr8.2:41576871-41576890 | MS.gene35959:intron | 40.0% |
| ! | GAAGCAAAAGGTGGACTTAA+AGG | - | chr8.2:41577805-41577824 | None:intergenic | 40.0% |
| ! | GGCTCCTTAAACATTTTGTC+AGG | + | chr8.2:41577464-41577483 | MS.gene35959:intron | 40.0% |
| ! | TCATTGATGACAGCAAAGAG+AGG | - | chr8.2:41576871-41576890 | None:intergenic | 40.0% |
| ! | TGGAGAAAATTTGCTTGGGA+GGG | + | chr8.2:41577511-41577530 | MS.gene35959:intron | 40.0% |
| !! | ATGACATTTTGGTCCCGTTT+GGG | + | chr8.2:41574722-41574741 | MS.gene35959:intron | 40.0% |
| !! | CAGTTTTGTGTTGACAGGTT+TGG | + | chr8.2:41574414-41574433 | MS.gene35959:intron | 40.0% |
| !!! | ATGTTTTTTTTTGGGGGGGA+GGG | - | chr8.2:41578454-41578473 | None:intergenic | 40.0% |
| !!! | CTTTTCTAGGGAGTGCTTTA+GGG | + | chr8.2:41578935-41578954 | MS.gene35959:intron | 40.0% |
| !!! | GTTGCTGCGTCCTTTTTTAA+TGG | + | chr8.2:41575735-41575754 | MS.gene35959:CDS | 40.0% |
| !!! | TATGTTTTTTTTTGGGGGGG+AGG | - | chr8.2:41578455-41578474 | None:intergenic | 40.0% |
| !!! | TCAAAAGGGTTGGCTTTTGT+GGG | + | chr8.2:41575665-41575684 | MS.gene35959:CDS | 40.0% |
| !!! | TCTTTTCTAGGGAGTGCTTT+AGG | + | chr8.2:41578934-41578953 | MS.gene35959:intron | 40.0% |
| !!! | TTCAAAAGGGTTGGCTTTTG+TGG | + | chr8.2:41575664-41575683 | MS.gene35959:CDS | 40.0% |
| AACAACTGGGGAAATTCACC+AGG | - | chr8.2:41578081-41578100 | None:intergenic | 45.0% | |
| AACCACCCTAACCAAACTCA+TGG | + | chr8.2:41577683-41577702 | MS.gene35959:intron | 45.0% | |
| ACAGACTTAGACACGAACAC+CGG | - | chr8.2:41577061-41577080 | None:intergenic | 45.0% | |
| ACATTGCCTCGAAATCTCGA+GGG | - | chr8.2:41578601-41578620 | None:intergenic | 45.0% | |
| AGAAGATTGGAAGGGAAGCT+AGG | + | chr8.2:41578662-41578681 | MS.gene35959:intron | 45.0% | |
| AGCAACTCCTGTCAATCCAA+TGG | - | chr8.2:41575721-41575740 | None:intergenic | 45.0% | |
| AGGATGATAGCAACTGGTGT+AGG | - | chr8.2:41578024-41578043 | None:intergenic | 45.0% | |
| ATCACAACTGCTGCTGTACT+TGG | + | chr8.2:41575365-41575384 | MS.gene35959:CDS | 45.0% | |
| ATGTCAAATAGCGGCCAAAG+AGG | + | chr8.2:41574105-41574124 | MS.gene35959:intron | 45.0% | |
| CAGAACGCATGGATAGTGAT+AGG | - | chr8.2:41578994-41579013 | None:intergenic | 45.0% | |
| CCAGAAGCTGGAAAATACAC+GGG | + | chr8.2:41577246-41577265 | MS.gene35959:intron | 45.0% | |
| CCCTAGAGAGAAGATTGGAA+GGG | + | chr8.2:41578654-41578673 | MS.gene35959:intron | 45.0% | |
| CCCTTCCAATCTTCTCTCTA+GGG | - | chr8.2:41578657-41578676 | None:intergenic | 45.0% | |
| CCGGAAGGCTTCTTCAAATA+TGG | + | chr8.2:41575425-41575444 | MS.gene35959:CDS | 45.0% | |
| CGATTGAGGATGCTGTACTT+AGG | + | chr8.2:41574276-41574295 | MS.gene35959:intron | 45.0% | |
| CTAGTTGCCATTGGATTGAC+AGG | + | chr8.2:41575711-41575730 | MS.gene35959:CDS | 45.0% | |
| CTATCACTATCCATGCGTTC+TGG | + | chr8.2:41578992-41579011 | MS.gene35959:CDS | 45.0% | |
| CTCCAAGCAACAACTTTAGG+TGG | + | chr8.2:41577759-41577778 | MS.gene35959:intron | 45.0% | |
| CTGAGCTTCAAAACCCAAAC+GGG | - | chr8.2:41574738-41574757 | None:intergenic | 45.0% | |
| CTGGGTTCAAACCTGAACAA+AGG | - | chr8.2:41578385-41578404 | None:intergenic | 45.0% | |
| CTGTCAACACAAAACTGCCT+GGG | - | chr8.2:41574411-41574430 | None:intergenic | 45.0% | |
| CTGTCAATCCAATGGCAACT+AGG | - | chr8.2:41575713-41575732 | None:intergenic | 45.0% | |
| CTTGAGTTTCCATCAGGGTT+GGG | + | chr8.2:41577443-41577462 | MS.gene35959:intron | 45.0% | |
| GAAAACGGTGAGAAAAACGG+TGG | + | chr8.2:41578773-41578792 | MS.gene35959:intron | 45.0% | |
| GAAACTGTTTGCCATTCCCA+AGG | - | chr8.2:41573979-41573998 | None:intergenic | 45.0% | |
| GACGGTTATTAAGGCGTACA+AGG | - | chr8.2:41578635-41578654 | None:intergenic | 45.0% | |
| GCAACAGCTCTACCATATCT+AGG | + | chr8.2:41574442-41574461 | MS.gene35959:CDS | 45.0% | |
| GCACTAAGGATGATAGCAAC+TGG | - | chr8.2:41578030-41578049 | None:intergenic | 45.0% | |
| GCCAGAAGCTGGAAAATACA+CGG | + | chr8.2:41577245-41577264 | MS.gene35959:intron | 45.0% | |
| GCTGAGCTTCAAAACCCAAA+CGG | - | chr8.2:41574739-41574758 | None:intergenic | 45.0% | |
| GGATAGTGATAGGAGTGAGA+AGG | - | chr8.2:41578984-41579003 | None:intergenic | 45.0% | |
| GGGACGTCATAAAAAAGCCT+CGG | - | chr8.2:41576624-41576643 | None:intergenic | 45.0% | |
| TCCCTAGAGAGAAGATTGGA+AGG | + | chr8.2:41578653-41578672 | MS.gene35959:intron | 45.0% | |
| TCCCTTCCAATCTTCTCTCT+AGG | - | chr8.2:41578658-41578677 | None:intergenic | 45.0% | |
| TCTTGAGTTTCCATCAGGGT+TGG | + | chr8.2:41577442-41577461 | MS.gene35959:intron | 45.0% | |
| TGATAGAGCCCTGAATACTG+AGG | + | chr8.2:41577166-41577185 | MS.gene35959:intron | 45.0% | |
| TGTAGCACTGCTTGTTTGGT+GGG | + | chr8.2:41576556-41576575 | MS.gene35959:intron | 45.0% | |
| TTGTAGCACTGCTTGTTTGG+TGG | + | chr8.2:41576555-41576574 | MS.gene35959:intron | 45.0% | |
| ! | CACCTAAAGTTGTTGCTTGG+AGG | - | chr8.2:41577761-41577780 | None:intergenic | 45.0% |
| ! | CATCTCTTGCTTGTGGATTG+GGG | + | chr8.2:41574004-41574023 | MS.gene35959:intron | 45.0% |
| ! | CGTTTTTGCTCCACTTCTTG+AGG | + | chr8.2:41576588-41576607 | MS.gene35959:CDS | 45.0% |
| ! | CTCTCTAGGGACGGTTATTA+AGG | - | chr8.2:41578644-41578663 | None:intergenic | 45.0% |
| ! | CTTTGTTCAGGTTTGAACCC+AGG | + | chr8.2:41578383-41578402 | MS.gene35959:intron | 45.0% |
| ! | GATAAGGAGTTGGAGTACCT+GGG | - | chr8.2:41578403-41578422 | None:intergenic | 45.0% |
| ! | GCCCACCTTGTTTGTTAAAC+AGG | + | chr8.2:41577538-41577557 | MS.gene35959:intron | 45.0% |
| ! | GGAGAAAATTTGCTTGGGAG+GGG | + | chr8.2:41577512-41577531 | MS.gene35959:intron | 45.0% |
| ! | GTTGTTGCTTGGAGGAAGTT+AGG | - | chr8.2:41577753-41577772 | None:intergenic | 45.0% |
| ! | TCCAATCTTCTCTCTAGGGA+CGG | - | chr8.2:41578653-41578672 | None:intergenic | 45.0% |
| ! | TGCTCTAATGCCAAGTTGGA+TGG | - | chr8.2:41577113-41577132 | None:intergenic | 45.0% |
| ! | TGTGTTGACAGGTTTGGTTG+AGG | + | chr8.2:41574420-41574439 | MS.gene35959:intron | 45.0% |
| ! | TTTCATTCTCTGAGGAGCCT+TGG | + | chr8.2:41577386-41577405 | MS.gene35959:intron | 45.0% |
| !! | ATCCATGCGTTCTGGAATTC+AGG | + | chr8.2:41579000-41579019 | MS.gene35959:CDS | 45.0% |
| !! | CAACATGGGCTGGACAAATT+TGG | + | chr8.2:41577204-41577223 | MS.gene35959:intron | 45.0% |
| !! | CTTGTCGACTTGTTTGTGTC+CGG | + | chr8.2:41577039-41577058 | MS.gene35959:intron | 45.0% |
| !! | GATGACATTTTGGTCCCGTT+TGG | + | chr8.2:41574721-41574740 | MS.gene35959:intron | 45.0% |
| !!! | TGTTTTTAGTGGGTGTGAGG+AGG | + | chr8.2:41575839-41575858 | MS.gene35959:intron | 45.0% |
| AACTGCAGGTCATTATGCCC+AGG | + | chr8.2:41577292-41577311 | MS.gene35959:intron | 50.0% | |
| ACCAGGAGTGAGATGAGCAA+GGG | - | chr8.2:41578064-41578083 | None:intergenic | 50.0% | |
| ACCGTCCCTAGAGAGAAGAT+TGG | + | chr8.2:41578649-41578668 | MS.gene35959:intron | 50.0% | |
| ACGATAGGAGGTTGGCAACA+TGG | - | chr8.2:41576090-41576109 | None:intergenic | 50.0% | |
| ACTGCAGGTCATTATGCCCA+GGG | + | chr8.2:41577293-41577312 | MS.gene35959:intron | 50.0% | |
| CAACACTTACCAACCACTCC+CGG | + | chr8.2:41575406-41575425 | MS.gene35959:CDS | 50.0% | |
| CACATTGCCTCGAAATCTCG+AGG | - | chr8.2:41578602-41578621 | None:intergenic | 50.0% | |
| CACCATGAGTTTGGTTAGGG+TGG | - | chr8.2:41577688-41577707 | None:intergenic | 50.0% | |
| CCTGTCAACACAAAACTGCC+TGG | - | chr8.2:41574412-41574431 | None:intergenic | 50.0% | |
| CTCCTGAATTCCAGAACGCA+TGG | - | chr8.2:41579005-41579024 | None:intergenic | 50.0% | |
| GAATTGGGATCAACATGGGC+TGG | + | chr8.2:41577194-41577213 | MS.gene35959:intron | 50.0% | |
| GCTAGTAAGAGCTCTCCACA+AGG | - | chr8.2:41576227-41576246 | None:intergenic | 50.0% | |
| GCTGCTTCACATGATGCTCA+TGG | + | chr8.2:41575011-41575030 | MS.gene35959:intron | 50.0% | |
| GGTTTATTCTCGCCAGAAGC+TGG | + | chr8.2:41577234-41577253 | MS.gene35959:intron | 50.0% | |
| GTGTGCTTTCTCCGACAGTA+GGG | + | chr8.2:41579247-41579266 | MS.gene35959:intron | 50.0% | |
| GTTCGCTTGCTTCCGTTGAT+TGG | + | chr8.2:41576279-41576298 | MS.gene35959:CDS | 50.0% | |
| TCCTCACTCCTAAATGGCAG+TGG | + | chr8.2:41577575-41577594 | MS.gene35959:intron | 50.0% | |
| TGTGTGCTTTCTCCGACAGT+AGG | + | chr8.2:41579246-41579265 | MS.gene35959:intron | 50.0% | |
| TTTAAGGAGCCCAACCCTGA+TGG | - | chr8.2:41577455-41577474 | None:intergenic | 50.0% | |
| ! | AATCTCGAGGGCCCAGATTT+TGG | - | chr8.2:41578589-41578608 | None:intergenic | 50.0% |
| ! | CCCGTGTATTTTCCAGCTTC+TGG | - | chr8.2:41577249-41577268 | None:intergenic | 50.0% |
| ! | CTTGAGGAGACAGTTTTCCG+AGG | + | chr8.2:41576604-41576623 | MS.gene35959:CDS | 50.0% |
| ! | GGATAAGGAGTTGGAGTACC+TGG | - | chr8.2:41578404-41578423 | None:intergenic | 50.0% |
| ! | TCCACTGCCATTTAGGAGTG+AGG | - | chr8.2:41577579-41577598 | None:intergenic | 50.0% |
| !! | CCAGGCAGTTTTGTGTTGAC+AGG | + | chr8.2:41574409-41574428 | MS.gene35959:intron | 50.0% |
| !! | GGTTCTAAGTAGTGGCCAGT+GGG | + | chr8.2:41575900-41575919 | MS.gene35959:intron | 50.0% |
| !! | TGGTTCTAAGTAGTGGCCAG+TGG | + | chr8.2:41575899-41575918 | MS.gene35959:intron | 50.0% |
| ACTTACCAACCACTCCCGGA+AGG | + | chr8.2:41575410-41575429 | MS.gene35959:CDS | 55.0% | |
| CACCAGGAGTGAGATGAGCA+AGG | - | chr8.2:41578065-41578084 | None:intergenic | 55.0% | |
| TGGAGAGACCCCAGAAAGAG+AGG | + | chr8.2:41575755-41575774 | MS.gene35959:CDS | 55.0% | |
| TGGGCAGGAGTTGGACTTGT+TGG | + | chr8.2:41575684-41575703 | MS.gene35959:CDS | 55.0% | |
| TTGAAGAAGCCTTCCGGGAG+TGG | - | chr8.2:41575422-41575441 | None:intergenic | 55.0% | |
| ! | ATTATGCCCAGGGAGCGTGT+TGG | + | chr8.2:41577303-41577322 | MS.gene35959:intron | 55.0% |
| ! | GCTTGTTTGGTGGGCATCAC+AGG | + | chr8.2:41576565-41576584 | MS.gene35959:CDS | 55.0% |
| ! | GTTGGTGCCCTAGTTGCCAT+TGG | + | chr8.2:41575702-41575721 | MS.gene35959:CDS | 55.0% |
| ! | TGGCTTTTGTGGGCAGGAGT+TGG | + | chr8.2:41575675-41575694 | MS.gene35959:CDS | 55.0% |
| ! | TGTTGGTGAGGGAGGGTTTG+AGG | + | chr8.2:41577320-41577339 | MS.gene35959:intron | 55.0% |
| !! | GTAAGGTGAAGGGTACCCAC+TGG | - | chr8.2:41575918-41575937 | None:intergenic | 55.0% |
| !!! | AAGGGTTGGCTTTTGTGGGC+AGG | + | chr8.2:41575669-41575688 | MS.gene35959:CDS | 55.0% |
| AGAAGCCTTCCGGGAGTGGT+TGG | - | chr8.2:41575418-41575437 | None:intergenic | 60.0% | |
| GCCCTTGCTCATCTCACTCC+TGG | + | chr8.2:41578060-41578079 | MS.gene35959:CDS | 60.0% | |
| GGGCAAACACAGCCGCACTA+AGG | - | chr8.2:41578044-41578063 | None:intergenic | 60.0% | |
| TCTGGGCCCTCGAGATTTCG+AGG | + | chr8.2:41578592-41578611 | MS.gene35959:intron | 60.0% | |
| CCCTCACCAACACGCTCCCT+GGG | - | chr8.2:41577312-41577331 | None:intergenic | 65.0% | |
| TCCCTCACCAACACGCTCCC+TGG | - | chr8.2:41577313-41577332 | None:intergenic | 65.0% | |
| ! | AGGGAGCGTGTTGGTGAGGG+AGG | + | chr8.2:41577312-41577331 | MS.gene35959:intron | 65.0% |
| ! | CCCAGGGAGCGTGTTGGTGA+GGG | + | chr8.2:41577309-41577328 | MS.gene35959:intron | 65.0% |
| ! | GGGAGCGTGTTGGTGAGGGA+GGG | + | chr8.2:41577313-41577332 | MS.gene35959:intron | 65.0% |
| ! | GCCCAGGGAGCGTGTTGGTG+AGG | + | chr8.2:41577308-41577327 | MS.gene35959:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 41573966 | 41579406 | 41573966 | ID=MS.gene35959 |
| chr8.2 | mRNA | 41573966 | 41579406 | 41573966 | ID=MS.gene35959.t1;Parent=MS.gene35959 |
| chr8.2 | exon | 41573966 | 41573972 | 41573966 | ID=MS.gene35959.t1.exon1;Parent=MS.gene35959.t1 |
| chr8.2 | CDS | 41573966 | 41573972 | 41573966 | ID=cds.MS.gene35959.t1;Parent=MS.gene35959.t1 |
| chr8.2 | exon | 41574431 | 41574524 | 41574431 | ID=MS.gene35959.t1.exon2;Parent=MS.gene35959.t1 |
| chr8.2 | CDS | 41574431 | 41574524 | 41574431 | ID=cds.MS.gene35959.t1;Parent=MS.gene35959.t1 |
| chr8.2 | exon | 41575364 | 41575446 | 41575364 | ID=MS.gene35959.t1.exon3;Parent=MS.gene35959.t1 |
| chr8.2 | CDS | 41575364 | 41575446 | 41575364 | ID=cds.MS.gene35959.t1;Parent=MS.gene35959.t1 |
| chr8.2 | exon | 41575643 | 41575776 | 41575643 | ID=MS.gene35959.t1.exon4;Parent=MS.gene35959.t1 |
| chr8.2 | CDS | 41575643 | 41575776 | 41575643 | ID=cds.MS.gene35959.t1;Parent=MS.gene35959.t1 |
| chr8.2 | exon | 41576267 | 41576316 | 41576267 | ID=MS.gene35959.t1.exon5;Parent=MS.gene35959.t1 |
| chr8.2 | CDS | 41576267 | 41576316 | 41576267 | ID=cds.MS.gene35959.t1;Parent=MS.gene35959.t1 |
| chr8.2 | exon | 41576561 | 41576653 | 41576561 | ID=MS.gene35959.t1.exon6;Parent=MS.gene35959.t1 |
| chr8.2 | CDS | 41576561 | 41576653 | 41576561 | ID=cds.MS.gene35959.t1;Parent=MS.gene35959.t1 |
| chr8.2 | exon | 41578017 | 41578108 | 41578017 | ID=MS.gene35959.t1.exon7;Parent=MS.gene35959.t1 |
| chr8.2 | CDS | 41578017 | 41578108 | 41578017 | ID=cds.MS.gene35959.t1;Parent=MS.gene35959.t1 |
| chr8.2 | exon | 41578944 | 41579050 | 41578944 | ID=MS.gene35959.t1.exon8;Parent=MS.gene35959.t1 |
| chr8.2 | CDS | 41578944 | 41579050 | 41578944 | ID=cds.MS.gene35959.t1;Parent=MS.gene35959.t1 |
| chr8.2 | exon | 41579368 | 41579406 | 41579368 | ID=MS.gene35959.t1.exon9;Parent=MS.gene35959.t1 |
| chr8.2 | CDS | 41579368 | 41579406 | 41579368 | ID=cds.MS.gene35959.t1;Parent=MS.gene35959.t1 |
| Gene Sequence |
| Protein sequence |
