Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36023.t1 | XP_013445513.1 | 98 | 654 | 13 | 0 | 1 | 654 | 1 | 654 | 0.00E+00 | 1207.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36023.t1 | P51281 | 43.3 | 563 | 293 | 5 | 67 | 607 | 6 | 564 | 4.4e-118 | 426.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36023.t1 | A0A072TPV0 | 98.0 | 654 | 13 | 0 | 1 | 654 | 1 | 654 | 0.0e+00 | 1207.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050060 | MS.gene36023 | 0.82145 | 4.01E-53 | -1.69E-46 |
| MS.gene051525 | MS.gene36023 | 0.816999 | 4.14E-52 | -1.69E-46 |
| MS.gene053912 | MS.gene36023 | 0.805284 | 1.44E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene36023 | 0.805417 | 1.35E-49 | -1.69E-46 |
| MS.gene055539 | MS.gene36023 | 0.81255 | 4.01E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene36023 | 0.808293 | 3.33E-50 | -1.69E-46 |
| MS.gene055744 | MS.gene36023 | 0.813937 | 1.99E-51 | -1.69E-46 |
| MS.gene056514 | MS.gene36023 | 0.810793 | 9.66E-51 | -1.69E-46 |
| MS.gene057825 | MS.gene36023 | 0.821166 | 4.67E-53 | -1.69E-46 |
| MS.gene058120 | MS.gene36023 | 0.819497 | 1.13E-52 | -1.69E-46 |
| MS.gene058700 | MS.gene36023 | 0.815457 | 9.16E-52 | -1.69E-46 |
| MS.gene05886 | MS.gene36023 | 0.840677 | 7.53E-58 | -1.69E-46 |
| MS.gene059420 | MS.gene36023 | 0.801588 | 8.39E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36023.t1 | MTR_8g463650 | 98.012 | 654 | 13 | 0 | 1 | 654 | 1 | 654 | 0.0 | 1299 |
| MS.gene36023.t1 | MTR_8g463650 | 98.182 | 550 | 10 | 0 | 1 | 550 | 1 | 550 | 0.0 | 1091 |
| MS.gene36023.t1 | MTR_8g463650 | 97.996 | 449 | 9 | 0 | 1 | 449 | 1 | 449 | 0.0 | 894 |
| MS.gene36023.t1 | MTR_8g463650 | 97.778 | 450 | 10 | 0 | 1 | 450 | 1 | 450 | 0.0 | 893 |
| MS.gene36023.t1 | MTR_1g111400 | 49.204 | 628 | 280 | 10 | 54 | 654 | 71 | 686 | 0.0 | 559 |
| MS.gene36023.t1 | MTR_1g111400 | 68.196 | 327 | 103 | 1 | 54 | 379 | 71 | 397 | 9.20e-157 | 460 |
| MS.gene36023.t1 | MTR_1g076810 | 54.114 | 316 | 142 | 2 | 67 | 380 | 329 | 643 | 1.72e-111 | 350 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36023.t1 | AT1G73170 | 64.441 | 599 | 200 | 6 | 62 | 654 | 75 | 666 | 0.0 | 738 |
| MS.gene36023.t1 | AT1G73170 | 64.250 | 593 | 199 | 6 | 62 | 648 | 75 | 660 | 0.0 | 727 |
| MS.gene36023.t1 | AT1G73170 | 64.906 | 530 | 173 | 6 | 131 | 654 | 16 | 538 | 0.0 | 652 |
| MS.gene36023.t1 | AT3G10420 | 49.676 | 618 | 250 | 12 | 66 | 652 | 95 | 682 | 0.0 | 564 |
| MS.gene36023.t1 | AT3G10420 | 54.721 | 466 | 181 | 6 | 66 | 515 | 95 | 546 | 4.24e-173 | 504 |
| MS.gene36023.t1 | AT1G73170 | 57.644 | 399 | 156 | 6 | 262 | 654 | 1 | 392 | 1.47e-139 | 413 |
| MS.gene36023.t1 | AT1G33290 | 54.859 | 319 | 139 | 3 | 65 | 380 | 43 | 359 | 4.49e-117 | 355 |
| MS.gene36023.t1 | AT1G33290 | 57.143 | 287 | 118 | 3 | 97 | 380 | 1 | 285 | 1.27e-110 | 335 |
| MS.gene36023.t1 | AT1G33290 | 55.114 | 176 | 75 | 2 | 65 | 237 | 43 | 217 | 3.43e-58 | 198 |
Find 169 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTGGACATCAGCTCTTTC+TGG | 0.094485 | 8.1:+51996010 | None:intergenic |
| ATCGAAGTGGTTATGGATTT+AGG | 0.116241 | 8.1:-51999955 | MS.gene36023:CDS |
| TATTACCTTTGTCACATAAA+TGG | 0.152091 | 8.1:+51994078 | None:intergenic |
| GGGTCTTCTTTGTTGCTTAT+TGG | 0.180077 | 8.1:-51999682 | MS.gene36023:CDS |
| ACTGTGGATGCTATTCTTTC+AGG | 0.198781 | 8.1:-51996233 | MS.gene36023:intron |
| GGTCTTCTTTGTTGCTTATT+GGG | 0.199941 | 8.1:-51999681 | MS.gene36023:CDS |
| CGCATCCTGCCATCCCATTA+TGG | 0.215129 | 8.1:-51992020 | MS.gene36023:CDS |
| ATTAACAGCCCTCTTGAAAA+TGG | 0.252129 | 8.1:-51996058 | MS.gene36023:CDS |
| CCGTTGGCTCGGTTTCCTTC+CGG | 0.254779 | 8.1:-51999925 | MS.gene36023:CDS |
| TCGAAGTGGTTATGGATTTA+GGG | 0.258702 | 8.1:-51999954 | MS.gene36023:CDS |
| CGTTGGCTCGGTTTCCTTCC+GGG | 0.267249 | 8.1:-51999924 | MS.gene36023:CDS |
| TGCTAAATTGTTGCAAGATT+TGG | 0.284013 | 8.1:-51999713 | MS.gene36023:CDS |
| TTATGTTGCATATCAGAATT+AGG | 0.292765 | 8.1:+51999499 | None:intergenic |
| CGTGTTGGTAGAGCAATTTC+AGG | 0.295190 | 8.1:-51999739 | MS.gene36023:CDS |
| GTGATTGTAATTGATGAAAT+TGG | 0.303910 | 8.1:-51999439 | MS.gene36023:CDS |
| GGATGAGGCGGACGTTGAAC+TGG | 0.320467 | 8.1:-52000049 | MS.gene36023:CDS |
| AATCGGAAAGGCACAATTAT+TGG | 0.322543 | 8.1:-51999772 | MS.gene36023:CDS |
| TGCAGCCATTGCTTCAAGTT+TGG | 0.323033 | 8.1:+51999414 | None:intergenic |
| TCGACAAGTTAGAGGATTCT+TGG | 0.326762 | 8.1:-51995955 | MS.gene36023:CDS |
| GTGATTCATCTTGCCTGGTT+TGG | 0.328198 | 8.1:+51995993 | None:intergenic |
| GCGTTTGCTGTCTCTATTGC+CGG | 0.328483 | 8.1:-52000025 | MS.gene36023:CDS |
| TCTTCATCTCAATCAACTTT+CGG | 0.330340 | 8.1:-52000196 | MS.gene36023:CDS |
| TCATTTCATCCGACCCATAA+TGG | 0.339902 | 8.1:+51992006 | None:intergenic |
| TCAAGAGGGCTGTTAATAAC+AGG | 0.345206 | 8.1:+51996064 | None:intergenic |
| TTCGGAGAAGGCTGATGCTT+TGG | 0.359335 | 8.1:-51993879 | MS.gene36023:CDS |
| ATTACCTTTGTCACATAAAT+GGG | 0.366924 | 8.1:+51994079 | None:intergenic |
| GATGAAGCGTTTGGGTGATA+TGG | 0.374183 | 8.1:+52000164 | None:intergenic |
| CATTTCATCCGACCCATAAT+GGG | 0.385612 | 8.1:+51992007 | None:intergenic |
| GCATCCTGCCATCCCATTAT+GGG | 0.387057 | 8.1:-51992019 | MS.gene36023:CDS |
| TCTACTACCAAGGTCATATC+AGG | 0.388222 | 8.1:-51992126 | MS.gene36023:CDS |
| GTTGCCTATCGACAAGTTAG+AGG | 0.389073 | 8.1:-51995963 | MS.gene36023:CDS |
| ATCTCAATCAACTTTCGGTT+CGG | 0.392919 | 8.1:-52000191 | MS.gene36023:CDS |
| CTCATTTCAGGAGGCAAGAA+TGG | 0.393669 | 8.1:-51992189 | MS.gene36023:intron |
| CTACTACTGACCCGCAAAAC+GGG | 0.397718 | 8.1:+52000087 | None:intergenic |
| CAAAGGTGATTCATCTTGCC+TGG | 0.410302 | 8.1:+51995988 | None:intergenic |
| TGAATATCCTCGACAGTGAT+TGG | 0.418994 | 8.1:+51999880 | None:intergenic |
| TTTCTCATCATCCTCCTCTT+CGG | 0.420671 | 8.1:-52000128 | MS.gene36023:CDS |
| TCCTCCGACAAGCATCTCTA+AGG | 0.423005 | 8.1:+51999312 | None:intergenic |
| GATATACCTCATGCTGGAAT+AGG | 0.423066 | 8.1:-51999544 | MS.gene36023:CDS |
| ATCACCACCAATCTCATTAG+AGG | 0.425171 | 8.1:+51999570 | None:intergenic |
| CGACAAGTTAGAGGATTCTT+GGG | 0.427000 | 8.1:-51995954 | MS.gene36023:CDS |
| GATGTTGATCGAAGTGGTTA+TGG | 0.427730 | 8.1:-51999962 | MS.gene36023:CDS |
| CAGCTTGTTGCTACTGCTCA+TGG | 0.431260 | 8.1:-51999367 | MS.gene36023:CDS |
| GGGAATATCATGAGATTTGA+AGG | 0.432385 | 8.1:+51994099 | None:intergenic |
| TGCCGGAGGAGATGCGGAGG+CGG | 0.434542 | 8.1:-52000008 | MS.gene36023:CDS |
| CTTCTGAACACCCCTGCGGC+TGG | 0.435088 | 8.1:+51996349 | None:intergenic |
| TTACTAAGTGATTATGAAGA+TGG | 0.436078 | 8.1:-51993938 | MS.gene36023:CDS |
| TTGTTGCTTATTGGGCCTCC+AGG | 0.437743 | 8.1:-51999673 | MS.gene36023:CDS |
| TCGATCAACATCTGCACCTC+CGG | 0.448125 | 8.1:+51999973 | None:intergenic |
| TGTGGGGTGATGAAGCGTTT+GGG | 0.453774 | 8.1:+52000156 | None:intergenic |
| AACGGGAACCGTTCGATGTA+GGG | 0.455576 | 8.1:+52000104 | None:intergenic |
| GATGCTTGTCGGAGGAATAC+AGG | 0.455736 | 8.1:-51999305 | MS.gene36023:intron |
| AGATCCACAGGTTCTCCCTT+AGG | 0.456772 | 8.1:+51992146 | None:intergenic |
| TAGCATCCACAGTTGCTTCA+AGG | 0.456922 | 8.1:+51996243 | None:intergenic |
| TTAGAGGCAACTGTTATTCA+AGG | 0.457196 | 8.1:-51994238 | MS.gene36023:CDS |
| GGATAAGTGCTATTAGAAAT+CGG | 0.458559 | 8.1:-51999789 | MS.gene36023:CDS |
| GTGTGGGGTGATGAAGCGTT+TGG | 0.465133 | 8.1:+52000155 | None:intergenic |
| CTTCTTTAGCTTTGATTGCA+AGG | 0.467700 | 8.1:+51994141 | None:intergenic |
| GTCGATACCTCTAATGAGAT+TGG | 0.472826 | 8.1:-51999577 | MS.gene36023:CDS |
| GGAGAAGGCTGATGCTTTGG+AGG | 0.473559 | 8.1:-51993876 | MS.gene36023:intron |
| AATTGATAAGATAAAAGATT+CGG | 0.476265 | 8.1:-51993897 | MS.gene36023:CDS |
| TAATTCTGATATGCAACATA+AGG | 0.478444 | 8.1:-51999497 | MS.gene36023:CDS |
| ACCCGCCTCCGCATCTCCTC+CGG | 0.481061 | 8.1:+52000006 | None:intergenic |
| TTGCAAGATTTGGTTCAAGA+TGG | 0.482249 | 8.1:-51999703 | MS.gene36023:CDS |
| GATGAGGCGGACGTTGAACT+GGG | 0.482426 | 8.1:-52000048 | MS.gene36023:CDS |
| CATGAGATTTGAAGGCAGCT+TGG | 0.494708 | 8.1:+51994107 | None:intergenic |
| TTATCCGACCGGTTTGGATG+AGG | 0.497048 | 8.1:-52000064 | MS.gene36023:CDS |
| TAATATTATCAGTCAATTGA+AGG | 0.498483 | 8.1:+51994185 | None:intergenic |
| ACTACTACTGACCCGCAAAA+CGG | 0.498767 | 8.1:+52000086 | None:intergenic |
| GTTAACTACTCAGGCAGTAA+AGG | 0.501409 | 8.1:+51991882 | None:intergenic |
| AAACGGGAACCGTTCGATGT+AGG | 0.503135 | 8.1:+52000103 | None:intergenic |
| TCAGGTAGTATCACTTCAGC+TGG | 0.503831 | 8.1:-51992108 | MS.gene36023:CDS |
| TAGTAGTTATCCGACCGGTT+TGG | 0.505919 | 8.1:-52000070 | MS.gene36023:CDS |
| GCAACATAAGGTATTGATAG+AGG | 0.506491 | 8.1:-51999485 | MS.gene36023:CDS |
| GAAGTTGTTCAGTGAGCCAT+TGG | 0.508518 | 8.1:+51991914 | None:intergenic |
| CCTTCCTTAGAGATGCTTGT+CGG | 0.509943 | 8.1:-51999316 | MS.gene36023:CDS |
| GAGATGAAGAGGCCAGCCGC+AGG | 0.510798 | 8.1:-51996361 | MS.gene36023:CDS |
| AGATGAAGATGAAGATGAAG+TGG | 0.510945 | 8.1:+52000210 | None:intergenic |
| ATCACTTAGTAATGCTCGTA+TGG | 0.512371 | 8.1:+51993949 | None:intergenic |
| AACGTCCGCCTCATCCAAAC+CGG | 0.512831 | 8.1:+52000056 | None:intergenic |
| GCCGGAGGAGATGCGGAGGC+GGG | 0.513333 | 8.1:-52000007 | MS.gene36023:CDS |
| TGCAAGATTTGGTTCAAGAT+GGG | 0.516388 | 8.1:-51999702 | MS.gene36023:CDS |
| CCGACCCATAATGGGATGGC+AGG | 0.518186 | 8.1:+51992015 | None:intergenic |
| TCCTCCAATGGTAGTTCCAA+TGG | 0.522859 | 8.1:-51991930 | MS.gene36023:CDS |
| TCCACTCTAGACAAGTTCGT+TGG | 0.523174 | 8.1:-51993987 | MS.gene36023:intron |
| AGAGCATGTAGTGATTCCTA+AGG | 0.524157 | 8.1:-51992162 | MS.gene36023:CDS |
| GAGGCGGGTGAGTGAGCATC+CGG | 0.526019 | 8.1:-51999992 | MS.gene36023:CDS |
| TGAGCCATTGGAACTACCAT+TGG | 0.527973 | 8.1:+51991926 | None:intergenic |
| CAGGGAAATAGCTCGGATGC+TGG | 0.528836 | 8.1:-51999629 | MS.gene36023:CDS |
| CTCAACTGCACAACTAAATG+TGG | 0.529670 | 8.1:+51996301 | None:intergenic |
| CTTATTGGGCCTCCAGGTGT+AGG | 0.530531 | 8.1:-51999667 | MS.gene36023:CDS |
| CTCTATTGCCGGAGGAGATG+CGG | 0.530688 | 8.1:-52000014 | MS.gene36023:CDS |
| ATTGGTCTTACTTGTCGTGT+TGG | 0.531485 | 8.1:-51999754 | MS.gene36023:CDS |
| ACTGCACAACTAAATGTGGA+TGG | 0.536530 | 8.1:+51996305 | None:intergenic |
| TAGGGAGGAAACCGTTGGCT+CGG | 0.536669 | 8.1:-51999936 | MS.gene36023:CDS |
| GTTGGCTCGGTTTCCTTCCG+GGG | 0.537510 | 8.1:-51999923 | MS.gene36023:CDS |
| CTCTGATATAACAAAATCCC+CGG | 0.538114 | 8.1:+51999906 | None:intergenic |
| GACCTTGGTAGTAGATCCAC+AGG | 0.542220 | 8.1:+51992134 | None:intergenic |
| TTTGCTGTCGACAATCGAGC+AGG | 0.543380 | 8.1:-51999832 | MS.gene36023:CDS |
| TACTAAGTGATTATGAAGAT+GGG | 0.545344 | 8.1:-51993937 | MS.gene36023:CDS |
| TATTCAGTATGCTACTGCTC+AGG | 0.546998 | 8.1:-51999863 | MS.gene36023:CDS |
| CCACAGTTGCTTCAAGGCTG+CGG | 0.548338 | 8.1:+51996249 | None:intergenic |
| CAAGTACAATTGCACAGCGT+GGG | 0.549408 | 8.1:-51999393 | MS.gene36023:CDS |
| TAGAGGCAACTGTTATTCAA+GGG | 0.552419 | 8.1:-51994237 | MS.gene36023:CDS |
| GGGTGTTCAGAAGACAGTAC+TGG | 0.553635 | 8.1:-51996339 | MS.gene36023:CDS |
| CAGTATGCTACTGCTCAGGT+TGG | 0.554666 | 8.1:-51999859 | MS.gene36023:CDS |
| GCCATTGGAACTACCATTGG+AGG | 0.557625 | 8.1:+51991929 | None:intergenic |
| GGATTTAGGGAGGAAACCGT+TGG | 0.558714 | 8.1:-51999941 | MS.gene36023:CDS |
| AGATGAAGATGAAGTGGAAG+TGG | 0.561414 | 8.1:+52000216 | None:intergenic |
| TAAAATGAAGTCTCAAGAGC+CGG | 0.561416 | 8.1:-51996107 | MS.gene36023:CDS |
| TGGTACCAAACTTGAAGCAA+TGG | 0.569043 | 8.1:-51999419 | MS.gene36023:CDS |
| CGATGTAGGGACCGAAGAGG+AGG | 0.577122 | 8.1:+52000117 | None:intergenic |
| TGTGACACTCGGAGATGAAG+AGG | 0.577205 | 8.1:-51996372 | MS.gene36023:CDS |
| AGCGAACATGTTAACTACTC+AGG | 0.579641 | 8.1:+51991873 | None:intergenic |
| GATGAAGAGGCCAGCCGCAG+GGG | 0.581177 | 8.1:-51996359 | MS.gene36023:CDS |
| CTGCACAACTAAATGTGGAT+GGG | 0.583853 | 8.1:+51996306 | None:intergenic |
| CCGACAAGCATCTCTAAGGA+AGG | 0.585042 | 8.1:+51999316 | None:intergenic |
| TCATCAATTACAATCACTTG+CGG | 0.586983 | 8.1:+51999445 | None:intergenic |
| GTCAGTAGTAGTTATCCGAC+CGG | 0.587951 | 8.1:-52000075 | MS.gene36023:CDS |
| AGATGAAGAGGCCAGCCGCA+GGG | 0.590275 | 8.1:-51996360 | MS.gene36023:CDS |
| CGATCATCAGGGAAATAGCT+CGG | 0.590622 | 8.1:-51999636 | MS.gene36023:CDS |
| GAATCCTCTAACTTGTCGAT+AGG | 0.595648 | 8.1:+51995959 | None:intergenic |
| GATACTACCTGATATGACCT+TGG | 0.596520 | 8.1:+51992119 | None:intergenic |
| GATGATGAGAAAAGATGTGT+GGG | 0.598303 | 8.1:+52000139 | None:intergenic |
| AGAGGCAACTGTTATTCAAG+GGG | 0.598583 | 8.1:-51994236 | MS.gene36023:CDS |
| TATTCCCATTTATGTGACAA+AGG | 0.600386 | 8.1:-51994083 | MS.gene36023:intron |
| GATGGTGATATACCTCATGC+TGG | 0.600726 | 8.1:-51999550 | MS.gene36023:CDS |
| GAGCATGTAGTGATTCCTAA+GGG | 0.603170 | 8.1:-51992161 | MS.gene36023:CDS |
| CCGTAACAAAATAGACGAAG+TGG | 0.607647 | 8.1:+51995920 | None:intergenic |
| CCGGAAGGAAACCGAGCCAA+CGG | 0.610121 | 8.1:+51999925 | None:intergenic |
| CCTGCCATCCCATTATGGGT+CGG | 0.610753 | 8.1:-51992015 | MS.gene36023:CDS |
| AACAGCCCTCTTGAAAATGG+TGG | 0.613001 | 8.1:-51996055 | MS.gene36023:CDS |
| TAAGATAAAAGATTCGGAGA+AGG | 0.614698 | 8.1:-51993891 | MS.gene36023:CDS |
| ATTGGAACTACCATTGGAGG+AGG | 0.616066 | 8.1:+51991932 | None:intergenic |
| TCCTTAGAGATGCTTGTCGG+AGG | 0.617094 | 8.1:-51999313 | MS.gene36023:CDS |
| TCCGACCGGTTTGGATGAGG+CGG | 0.617326 | 8.1:-52000061 | MS.gene36023:CDS |
| TCTAATGAGATTGGTGGTGA+TGG | 0.617726 | 8.1:-51999568 | MS.gene36023:CDS |
| CCGCAGCCTTGAAGCAACTG+TGG | 0.618168 | 8.1:-51996249 | MS.gene36023:CDS |
| TCTTCGGTCCCTACATCGAA+CGG | 0.620973 | 8.1:-52000112 | MS.gene36023:CDS |
| AAGTGGTTATGGATTTAGGG+AGG | 0.621141 | 8.1:-51999951 | MS.gene36023:CDS |
| ATTGACTGATAATATTAGTG+AGG | 0.621563 | 8.1:-51994179 | MS.gene36023:CDS |
| AAAGAGCTGATGTCCAAACC+AGG | 0.623407 | 8.1:-51996006 | MS.gene36023:CDS |
| GCGGGTGAGTGAGCATCCGG+AGG | 0.624763 | 8.1:-51999989 | MS.gene36023:CDS |
| GATTCCTAAGGGAGAACCTG+TGG | 0.626298 | 8.1:-51992150 | MS.gene36023:CDS |
| GATGAAGATGAAGTGGAAGT+GGG | 0.626760 | 8.1:+52000217 | None:intergenic |
| GTAGCTATCAACTAGAAGCA+AGG | 0.627614 | 8.1:-51992076 | MS.gene36023:CDS |
| TTGTCGATAGGCAACATCAA+AGG | 0.629330 | 8.1:+51995971 | None:intergenic |
| TTTGCTGTCTCTATTGCCGG+AGG | 0.631793 | 8.1:-52000022 | MS.gene36023:CDS |
| AGAGTATCCAATCACTGTCG+AGG | 0.633378 | 8.1:-51999887 | MS.gene36023:CDS |
| GATATAACAAAATCCCCGGA+AGG | 0.634335 | 8.1:+51999910 | None:intergenic |
| AAGACAGTACTGGAGAGGAA+AGG | 0.639051 | 8.1:-51996329 | MS.gene36023:CDS |
| GCAAGTACAATTGCACAGCG+TGG | 0.640676 | 8.1:-51999394 | MS.gene36023:CDS |
| TCATCCGACCCATAATGGGA+TGG | 0.643172 | 8.1:+51992011 | None:intergenic |
| GGTGCAGATGTTGATCGAAG+TGG | 0.648291 | 8.1:-51999968 | MS.gene36023:CDS |
| TCAATTTAGAGTGTGACACT+CGG | 0.648790 | 8.1:-51996383 | MS.gene36023:intron |
| ACAGTTGAAAATGAATGATG+CGG | 0.649292 | 8.1:-51994209 | MS.gene36023:CDS |
| TTCAGAAGACAGTACTGGAG+AGG | 0.649684 | 8.1:-51996334 | MS.gene36023:CDS |
| GCAGTACCTATTCCAGCATG+AGG | 0.651345 | 8.1:+51999538 | None:intergenic |
| TCCGCCTCATCCAAACCGGT+CGG | 0.657090 | 8.1:+52000060 | None:intergenic |
| AACCTGTGGATCTACTACCA+AGG | 0.661137 | 8.1:-51992136 | MS.gene36023:CDS |
| AGTGCTATTAGAAATCGGAA+AGG | 0.666759 | 8.1:-51999784 | MS.gene36023:CDS |
| GGATGATGAGAAAAGATGTG+TGG | 0.669142 | 8.1:+52000138 | None:intergenic |
| TATTGCCGGAGGAGATGCGG+AGG | 0.670017 | 8.1:-52000011 | MS.gene36023:CDS |
| GAATCAGTAGAACATTGCAT+CGG | 0.670062 | 8.1:-51999810 | MS.gene36023:CDS |
| GATACCTCTAATGAGATTGG+TGG | 0.671807 | 8.1:-51999574 | MS.gene36023:CDS |
| ATGAGGCGGACGTTGAACTG+GGG | 0.688023 | 8.1:-52000047 | MS.gene36023:CDS |
| GTTCGATGTAGGGACCGAAG+AGG | 0.696918 | 8.1:+52000114 | None:intergenic |
| CTGTCTTCTGAACACCCCTG+CGG | 0.755967 | 8.1:+51996345 | None:intergenic |
| ATGATGAGAAAAGATGTGTG+GGG | 0.800838 | 8.1:+52000140 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 51991887 | 52000253 | 51991887 | ID=MS.gene36023 |
| chr8.1 | mRNA | 51991887 | 52000253 | 51991887 | ID=MS.gene36023.t1;Parent=MS.gene36023 |
| chr8.1 | exon | 51999306 | 52000253 | 51999306 | ID=MS.gene36023.t1.exon1;Parent=MS.gene36023.t1 |
| chr8.1 | CDS | 51999306 | 52000253 | 51999306 | ID=cds.MS.gene36023.t1;Parent=MS.gene36023.t1 |
| chr8.1 | exon | 51996234 | 51996396 | 51996234 | ID=MS.gene36023.t1.exon2;Parent=MS.gene36023.t1 |
| chr8.1 | CDS | 51996234 | 51996396 | 51996234 | ID=cds.MS.gene36023.t1;Parent=MS.gene36023.t1 |
| chr8.1 | exon | 51995919 | 51996154 | 51995919 | ID=MS.gene36023.t1.exon3;Parent=MS.gene36023.t1 |
| chr8.1 | CDS | 51995919 | 51996154 | 51995919 | ID=cds.MS.gene36023.t1;Parent=MS.gene36023.t1 |
| chr8.1 | exon | 51994084 | 51994263 | 51994084 | ID=MS.gene36023.t1.exon4;Parent=MS.gene36023.t1 |
| chr8.1 | CDS | 51994084 | 51994263 | 51994084 | ID=cds.MS.gene36023.t1;Parent=MS.gene36023.t1 |
| chr8.1 | exon | 51993877 | 51993999 | 51993877 | ID=MS.gene36023.t1.exon5;Parent=MS.gene36023.t1 |
| chr8.1 | CDS | 51993877 | 51993999 | 51993877 | ID=cds.MS.gene36023.t1;Parent=MS.gene36023.t1 |
| chr8.1 | exon | 51991887 | 51992201 | 51991887 | ID=MS.gene36023.t1.exon6;Parent=MS.gene36023.t1 |
| chr8.1 | CDS | 51991887 | 51992201 | 51991887 | ID=cds.MS.gene36023.t1;Parent=MS.gene36023.t1 |
| Gene Sequence |
| Protein sequence |
