AlfalfaGEDB | MS.gene36778

M. sativa cultivar XinJiangDaYe / MS.gene36778

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005634 GO:0006355 GO:0008150 GO:0008270 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0045893 GO:0045935 GO:0046872 GO:0046914 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0110165 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
PFAM: PF00320.30

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36778.t1	XP_003627002.1	99.7	290	1	0	1	290	1	290	1.00E-165	592.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36778.t1	O82632	50.0	272	96	11	33	290	16	261	3.1e-54	213.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36778.t1	G7LFY2	99.7	290	1	0	1	290	1	290	7.3e-166	592.8

TFs/TRs:

Gene ID	Type	Classification
MS.gene36778.t1	TF	C2C2-GATA

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049298	MS.gene36778	0.845256	4.55E-59	-1.69E-46
MS.gene050710	MS.gene36778	0.840623	7.78E-58	-1.69E-46
MS.gene051914	MS.gene36778	0.81011	1.36E-50	-1.69E-46
MS.gene052169	MS.gene36778	0.830799	2.40E-55	-1.69E-46
MS.gene052209	MS.gene36778	0.83818	3.35E-57	-1.69E-46
MS.gene054662	MS.gene36778	0.844722	6.34E-59	-1.69E-46
MS.gene054941	MS.gene36778	0.845686	3.48E-59	-1.69E-46
MS.gene05652	MS.gene36778	0.86011	2.60E-63	-1.69E-46
MS.gene057367	MS.gene36778	0.827366	1.63E-54	-1.69E-46
MS.gene057669	MS.gene36778	0.87466	5.68E-68	-1.69E-46
MS.gene058418	MS.gene36778	0.803254	3.81E-49	-1.69E-46
MS.gene05926	MS.gene36778	0.845254	4.55E-59	-1.69E-46
MS.gene05960	MS.gene36778	0.805972	1.03E-49	-1.69E-46
MS.gene059616	MS.gene36778	0.836679	8.12E-57	-1.69E-46
MS.gene060291	MS.gene36778	0.802947	4.41E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36778.t1	MTR_8g013950	99.125	343	2	1	1	343	1	342	0.0	708
MS.gene36778.t1	MTR_1g006650	46.154	338	134	12	35	343	26	344	5.04e-82	253
MS.gene36778.t1	MTR_3g109760	44.837	368	128	11	1	343	1	318	3.87e-81	250
MS.gene36778.t1	MTR_8g076340	39.362	282	119	7	31	295	41	287	5.81e-48	163
MS.gene36778.t1	MTR_4g071590	38.489	278	120	10	33	295	39	280	6.27e-43	150
MS.gene36778.t1	MTR_4g471590	38.489	278	120	10	33	295	39	280	6.27e-43	150
MS.gene36778.t1	MTR_5g021340	39.916	238	81	6	102	295	150	369	2.54e-40	146
MS.gene36778.t1	MTR_3g117380	37.319	276	130	6	33	295	53	298	7.92e-40	143
MS.gene36778.t1	MTR_6g032830	38.889	234	77	11	115	292	35	258	1.64e-35	130
MS.gene36778.t1	MTR_1g046680	58.824	119	44	3	179	295	126	241	6.74e-35	128
MS.gene36778.t1	MTR_1g094930	81.538	65	12	0	226	290	147	211	2.51e-33	124
MS.gene36778.t1	MTR_5g007600	76.389	72	17	0	225	296	258	329	2.72e-33	126
MS.gene36778.t1	MTR_5g007600	40.426	188	89	5	112	289	46	220	1.17e-29	116
MS.gene36778.t1	MTR_1g094930	72.973	74	20	0	226	299	242	315	9.88e-33	124
MS.gene36778.t1	MTR_7g085410	75.385	65	16	0	226	290	188	252	4.93e-31	118
MS.gene36778.t1	MTR_4g058910	64.198	81	29	0	212	292	300	380	1.46e-29	117
MS.gene36778.t1	MTR_1g116010	75.385	65	16	0	226	290	164	228	1.95e-29	113
MS.gene36778.t1	MTR_2g094600	75.385	65	16	0	226	290	216	280	2.36e-29	115
MS.gene36778.t1	MTR_7g446110	53.947	76	34	1	213	287	173	248	3.93e-21	91.3
MS.gene36778.t1	MTR_7g445950	32.044	181	94	5	107	287	30	181	8.32e-19	83.2
MS.gene36778.t1	MTR_7g446070	30.939	181	108	4	107	287	30	193	1.08e-18	83.2
MS.gene36778.t1	MTR_7g445980	60.000	60	23	1	230	288	37	96	8.43e-18	78.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene36778.t1	AT4G32890	48.160	326	121	13	33	343	16	308	3.02e-82	252
MS.gene36778.t1	AT5G25830	45.152	361	103	15	35	343	14	331	6.64e-72	226
MS.gene36778.t1	AT3G60530	48.792	207	58	8	101	298	63	230	7.25e-49	164
MS.gene36778.t1	AT2G45050	44.495	218	68	5	104	300	68	253	7.01e-48	162
MS.gene36778.t1	AT5G66320	41.277	235	79	6	102	294	100	317	6.75e-41	146
MS.gene36778.t1	AT5G66320	41.277	235	79	6	102	294	100	317	6.75e-41	146
MS.gene36778.t1	AT4G36240	38.745	271	104	9	35	293	11	231	6.11e-40	141
MS.gene36778.t1	AT4G34680	44.503	191	70	5	107	295	93	249	7.20e-39	139
MS.gene36778.t1	AT4G34680	44.503	191	70	5	107	295	93	249	7.20e-39	139
MS.gene36778.t1	AT1G08010	76.056	71	17	0	226	296	220	290	1.09e-33	126
MS.gene36778.t1	AT1G08010	76.056	71	17	0	226	296	220	290	1.09e-33	126
MS.gene36778.t1	AT1G08010	76.056	71	17	0	226	296	220	290	1.09e-33	126
MS.gene36778.t1	AT3G24050	77.941	68	15	0	225	292	193	260	1.68e-33	125
MS.gene36778.t1	AT3G54810	60.000	95	36	1	226	320	229	321	5.97e-32	122
MS.gene36778.t1	AT3G54810	60.000	95	36	1	226	320	229	321	5.97e-32	122
MS.gene36778.t1	AT3G51080	73.913	69	18	0	226	294	221	289	7.84e-31	119
MS.gene36778.t1	AT1G08000	74.627	67	17	0	226	292	218	284	1.22e-30	118
MS.gene36778.t1	AT1G08000	74.627	67	17	0	226	292	218	284	1.22e-30	118
MS.gene36778.t1	AT3G45170	57.143	77	33	0	218	294	107	183	5.15e-26	103
MS.gene36778.t1	AT2G28340	68.254	63	20	0	228	290	193	255	4.96e-25	102
MS.gene36778.t1	AT3G06740	32.990	97	40	2	226	307	41	127	3.08e-11	61.2

Find 88 sgRNAs with CRISPR-Local

Find 108 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTCCTGGTAGAGGTGTTTC+TGG	0.198536	8.2:-79076139	None:intergenic
GGAAGAGTCGGTGGAATTTC+CGG	0.199866	8.2:-79075692	None:intergenic
AAGGCTCACACGGTGGTTTC+TGG	0.227381	8.2:-79075594	None:intergenic
CTCTTTACAGTATGATGATA+TGG	0.231727	8.2:+79075931	MS.gene36778:intron
GGAGGCACAATTGTTCCTTA+TGG	0.277726	8.2:+79075772	MS.gene36778:CDS
ACACGCATTGCAGAGTGTTT+TGG	0.286863	8.2:-79076353	None:intergenic
CTTCCAGAACATTCCACATT+TGG	0.294560	8.2:-79076271	None:intergenic
GAATTCTCATAGGAAAGTTT+TGG	0.321671	8.2:+79076456	MS.gene36778:CDS
GACGTTTCTCCGGCGAGAAT+TGG	0.344010	8.2:-79075564	None:intergenic
AGGCGCGTGGACCAGTCTCC+TGG	0.390976	8.2:-79076190	None:intergenic
GTATGATGATATGGCGGAAC+TGG	0.396674	8.2:+79075940	MS.gene36778:intron
GATCCAAATGTGGAATGTTC+TGG	0.398960	8.2:+79076268	MS.gene36778:CDS
AGCTGTAACTCCTCTGGCTC+TGG	0.416860	8.2:+79075733	MS.gene36778:CDS
CACGCGCTGCTCCAGGAGAC+TGG	0.436417	8.2:+79076179	MS.gene36778:CDS
AAACGCTCACGCGCTGCTCC+AGG	0.438274	8.2:+79076172	MS.gene36778:CDS
AGACATAATCGCGTCAGCAT+TGG	0.443947	8.2:-79075644	None:intergenic
ATCAATTATCATCATCATTG+TGG	0.463155	8.2:+79076601	MS.gene36778:CDS
TACTTTGTCGGTGGCTACTA+CGG	0.465894	8.2:+79075529	MS.gene36778:CDS
AAGACGCCGCAGTGGAGAAC+AGG	0.467796	8.2:+79076319	MS.gene36778:CDS
CGAAGCATTCGAATTCTCAT+AGG	0.477067	8.2:+79076446	MS.gene36778:CDS
TCCGGTGATGTTCAACTCAC+CGG	0.479652	8.2:+79075799	MS.gene36778:CDS
TCAATTATCATCATCATTGT+GGG	0.480828	8.2:+79076602	MS.gene36778:CDS
GAAGCACAAGATTACTTTGT+CGG	0.482794	8.2:+79075517	MS.gene36778:CDS
CACCGGAGAACTCTGTGTTC+CGG	0.489493	8.2:+79075816	MS.gene36778:CDS
TGGTCACCGTGACGTTTCTC+CGG	0.491927	8.2:-79075574	None:intergenic
AAAACATTGCAACTTCTCTC+CGG	0.498282	8.2:+79076013	MS.gene36778:CDS
CGGTTTAACAGCACCGGCGC+CGG	0.503197	8.2:-79076032	None:intergenic
GATGAAGATTCCGGTGTTTG+CGG	0.503689	8.2:-79076052	None:intergenic
TAAGTCCGGTAGGTTGGTGC+CGG	0.508279	8.2:+79076387	MS.gene36778:CDS
TTGCAACTTCTCTCCGGCGC+CGG	0.510336	8.2:+79076019	MS.gene36778:CDS
TCTGGTGGTGATAACCGCTT+TGG	0.512040	8.2:+79075751	MS.gene36778:CDS
GAAATCAAGTAAATCATCAA+TGG	0.517205	8.2:-79075620	None:intergenic
GTTGACAGCTGTAACTCCTC+TGG	0.518284	8.2:+79075727	MS.gene36778:CDS
GGTGGTGATAACCGCTTTGG+AGG	0.525558	8.2:+79075754	MS.gene36778:CDS
TGCTTCGCCGATACAAAAGT+TGG	0.526129	8.2:-79076430	None:intergenic
CTCGCCGCCGGTCGATACTC+CGG	0.528513	8.2:-79076406	None:intergenic
TCCGGTGAGTTGAACATCAC+CGG	0.532904	8.2:-79075800	None:intergenic
GTCGGTGGCTACTACGGTGC+CGG	0.534317	8.2:+79075535	MS.gene36778:CDS
TACCGGAACACAGAGTTCTC+CGG	0.534601	8.2:-79075818	None:intergenic
CTGGTAGAGGTGTTTCTGGA+CGG	0.544153	8.2:-79076135	None:intergenic
CGTCCAGAAACACCTCTACC+AGG	0.545940	8.2:+79076136	MS.gene36778:CDS
GGAATGGCTTTCGAATTTCG+TGG	0.546230	8.2:+79075961	MS.gene36778:CDS
TCGGTGGAAGATGAAGATTC+CGG	0.552072	8.2:-79076061	None:intergenic
TTCTTCGATAACAATGTCGC+CGG	0.552150	8.2:+79075673	MS.gene36778:CDS
ATACTCCGGCACCAACCTAC+CGG	0.552745	8.2:-79076392	None:intergenic
GAGGTTTAAGTCCGGTAGGT+TGG	0.552850	8.2:+79076381	MS.gene36778:CDS
GTTTCGTCGGTGGAGAATGA+AGG	0.553392	8.2:-79076091	None:intergenic
GCTGTCAACAGCGGTGACAT+TGG	0.554444	8.2:-79075713	None:intergenic
GCGCGTCGGGGAGATGAAGT+AGG	0.565923	8.2:-79076210	None:intergenic
TGTAACTCCTCTGGCTCTGG+TGG	0.567338	8.2:+79075736	MS.gene36778:CDS
GCAGTGGAGAACAGGACCGA+TGG	0.568184	8.2:+79076327	MS.gene36778:CDS
AGCGGTGACATTGGAAGAGT+CGG	0.570500	8.2:-79075704	None:intergenic
TGCTGTTAAACCGCAAACAC+CGG	0.571815	8.2:+79076042	MS.gene36778:CDS
TGTTTGCGGTTTAACAGCAC+CGG	0.574755	8.2:-79076038	None:intergenic
ATGATATGGCGGAACTGGAA+TGG	0.580000	8.2:+79075945	MS.gene36778:CDS
ACAAAAGTTGGACTCGCCGC+CGG	0.580278	8.2:-79076418	None:intergenic
CAGTGGAGAACAGGACCGAT+GGG	0.585257	8.2:+79076328	MS.gene36778:CDS
TAGATAACATGTCTAAACTC+TGG	0.596187	8.2:-79076625	None:intergenic
GTTGGTGCCGGAGTATCGAC+CGG	0.600084	8.2:+79076399	MS.gene36778:CDS
GTTATCACCACCAGAGCCAG+AGG	0.602646	8.2:-79075743	None:intergenic
GAATGAAGGAAGTGTGTCGG+TGG	0.610970	8.2:-79076077	None:intergenic
AGTAAATCATCAATGGCGAA+AGG	0.614239	8.2:-79075613	None:intergenic
TCAATGGCGAAAGGCTCACA+CGG	0.620341	8.2:-79075604	None:intergenic
CGGCGAAAACCAATTCTCGC+CGG	0.631060	8.2:+79075555	MS.gene36778:CDS
GCACAAGATTACTTTGTCGG+TGG	0.638723	8.2:+79075520	MS.gene36778:CDS
GTTACGAGCAGTTTCGTCGG+TGG	0.641102	8.2:-79076101	None:intergenic
TGTGGTGTGAGGTTTAAGTC+CGG	0.641447	8.2:+79076373	MS.gene36778:CDS
GTGTGAGGTTTAAGTCCGGT+AGG	0.641902	8.2:+79076377	MS.gene36778:CDS
GGGGAGATGAAGTAGGCGCG+TGG	0.645736	8.2:-79076203	None:intergenic
TCTGCAATGCGTGTGGTGTG+AGG	0.651426	8.2:+79076362	MS.gene36778:CDS
AAAATGTCTCCACTGCGGCA+CGG	0.653917	8.2:+79076294	MS.gene36778:CDS
AGCGTTACGAGCAGTTTCGT+CGG	0.655792	8.2:-79076104	None:intergenic
AAAGCGTGAGGATCCAAATG+TGG	0.658111	8.2:+79076258	MS.gene36778:CDS
TTCTCGCCGGAGAAACGTCA+CGG	0.659546	8.2:+79075568	MS.gene36778:CDS
GCGTCTTATCCGTGCCGCAG+TGG	0.667437	8.2:-79076303	None:intergenic
GCTGACGCGATTATGTCTGA+CGG	0.674746	8.2:+79075649	MS.gene36778:CDS
GGTGACATTGGAAGAGTCGG+TGG	0.674783	8.2:-79075701	None:intergenic
GGAGTTACAGCTGTCAACAG+CGG	0.684832	8.2:-79075722	None:intergenic
GCACGGATAAGACGCCGCAG+TGG	0.685559	8.2:+79076311	MS.gene36778:CDS
AAAACACTCTGCAATGCGTG+TGG	0.694406	8.2:+79076355	MS.gene36778:CDS
GGAGAATGAAGGAAGTGTGT+CGG	0.695811	8.2:-79076080	None:intergenic
TTCGGCGTTTCATCTAACGG+TGG	0.696201	8.2:+79076568	MS.gene36778:CDS
TTTACAGTATGATGATATGG+CGG	0.707206	8.2:+79075934	MS.gene36778:intron
GGTGCCGGAGTATCGACCGG+CGG	0.709828	8.2:+79076402	MS.gene36778:CDS
GAACAATTGTGCCTCCAAAG+CGG	0.725448	8.2:-79075765	None:intergenic
ATCGGTCCTGTTCTCCACTG+CGG	0.751264	8.2:-79076325	None:intergenic
ATGGCGAAAGGCTCACACGG+TGG	0.757233	8.2:-79075601	None:intergenic
GGAAGAAAATGTCTCCACTG+CGG	0.780752	8.2:+79076289	MS.gene36778:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ACTTCAACTATCATCAATTA+CGG	-	chr8.2:79075876-79075895	None:intergenic	25.0%
!	ATCAATTATCATCATCATTG+TGG	+	chr8.2:79076601-79076620	MS.gene36778:CDS	25.0%
!	GAAATCAAGTAAATCATCAA+TGG	-	chr8.2:79075623-79075642	None:intergenic	25.0%
!	TCAATTATCATCATCATTGT+GGG	+	chr8.2:79076602-79076621	MS.gene36778:CDS	25.0%
!	TTAGTGACATTATTACTTAC+CGG	-	chr8.2:79075838-79075857	None:intergenic	25.0%
!!	TTCACGATTGGATAATTTTT+CGG	-	chr8.2:79076238-79076257	None:intergenic	25.0%
	CTCTTTACAGTATGATGATA+TGG	+	chr8.2:79075931-79075950	MS.gene36778:intron	30.0%
	TAGATAACATGTCTAAACTC+TGG	-	chr8.2:79076628-79076647	None:intergenic	30.0%
	TTTACAGTATGATGATATGG+CGG	+	chr8.2:79075934-79075953	MS.gene36778:intron	30.0%
!	ATGAGTCACAGTTCAATTTT+CGG	+	chr8.2:79076550-79076569	MS.gene36778:CDS	30.0%
!	ATTGTTCCTTATGGTTTTTC+CGG	+	chr8.2:79075781-79075800	MS.gene36778:CDS	30.0%
!	GAATTCTCATAGGAAAGTTT+TGG	+	chr8.2:79076456-79076475	MS.gene36778:CDS	30.0%
!	TGTTTTCAATTCTTCTTCAG+CGG	-	chr8.2:79075999-79076018	None:intergenic	30.0%
	AAAACATTGCAACTTCTCTC+CGG	+	chr8.2:79076013-79076032	MS.gene36778:CDS	35.0%
	AGTAAATCATCAATGGCGAA+AGG	-	chr8.2:79075616-79075635	None:intergenic	35.0%
	GAAGCACAAGATTACTTTGT+CGG	+	chr8.2:79075517-79075536	MS.gene36778:CDS	35.0%
!	ATTTTCGGCGTTTCATCTAA+CGG	+	chr8.2:79076565-79076584	MS.gene36778:CDS	35.0%
!!	ACGATTGGATAATTTTTCGG+TGG	-	chr8.2:79076235-79076254	None:intergenic	35.0%
	ACATCACCGGAAAAACCATA+AGG	-	chr8.2:79075790-79075809	None:intergenic	40.0%
	CTTCCAGAACATTCCACATT+TGG	-	chr8.2:79076274-79076293	None:intergenic	40.0%
	GATCCAAATGTGGAATGTTC+TGG	+	chr8.2:79076268-79076287	MS.gene36778:CDS	40.0%
	TTCTTCGATAACAATGTCGC+CGG	+	chr8.2:79075673-79075692	MS.gene36778:CDS	40.0%
!	CGAAGCATTCGAATTCTCAT+AGG	+	chr8.2:79076446-79076465	MS.gene36778:CDS	40.0%
	AAAACACTCTGCAATGCGTG+TGG	+	chr8.2:79076355-79076374	MS.gene36778:CDS	45.0%
	AAAGCGTGAGGATCCAAATG+TGG	+	chr8.2:79076258-79076277	MS.gene36778:CDS	45.0%
	AGACATAATCGCGTCAGCAT+TGG	-	chr8.2:79075647-79075666	None:intergenic	45.0%
	GAACAATTGTGCCTCCAAAG+CGG	-	chr8.2:79075768-79075787	None:intergenic	45.0%
	GATGAAGATTCCGGTGTTTG+CGG	-	chr8.2:79076055-79076074	None:intergenic	45.0%
	GCACAAGATTACTTTGTCGG+TGG	+	chr8.2:79075520-79075539	MS.gene36778:CDS	45.0%
	GGAAGAAAATGTCTCCACTG+CGG	+	chr8.2:79076289-79076308	MS.gene36778:CDS	45.0%
	GGAATGGCTTTCGAATTTCG+TGG	+	chr8.2:79075961-79075980	MS.gene36778:CDS	45.0%
	TACTTTGTCGGTGGCTACTA+CGG	+	chr8.2:79075529-79075548	MS.gene36778:CDS	45.0%
	TCGGTGGAAGATGAAGATTC+CGG	-	chr8.2:79076064-79076083	None:intergenic	45.0%
	TGCTGTTAAACCGCAAACAC+CGG	+	chr8.2:79076042-79076061	MS.gene36778:CDS	45.0%
	TGCTTCGCCGATACAAAAGT+TGG	-	chr8.2:79076433-79076452	None:intergenic	45.0%
	TGTGGTGTGAGGTTTAAGTC+CGG	+	chr8.2:79076373-79076392	MS.gene36778:CDS	45.0%
	TGTTTGCGGTTTAACAGCAC+CGG	-	chr8.2:79076041-79076060	None:intergenic	45.0%
!	ATGATATGGCGGAACTGGAA+TGG	+	chr8.2:79075945-79075964	MS.gene36778:CDS	45.0%
!	GGAGAATGAAGGAAGTGTGT+CGG	-	chr8.2:79076083-79076102	None:intergenic	45.0%
!	GGAGGCACAATTGTTCCTTA+TGG	+	chr8.2:79075772-79075791	MS.gene36778:CDS	45.0%
!	GGCGAGTCCAACTTTTGTAT+CGG	+	chr8.2:79076423-79076442	MS.gene36778:CDS	45.0%
!	GTATGATGATATGGCGGAAC+TGG	+	chr8.2:79075940-79075959	MS.gene36778:intron	45.0%
!	TCCAATCGTGAAAAAGCGTG+AGG	+	chr8.2:79076246-79076265	MS.gene36778:CDS	45.0%
!!	ACACGCATTGCAGAGTGTTT+TGG	-	chr8.2:79076356-79076375	None:intergenic	45.0%
!!	ATAATTTTTCGGTGGCGCGT+CGG	-	chr8.2:79076227-79076246	None:intergenic	45.0%
!!	CACGCATTGCAGAGTGTTTT+GGG	-	chr8.2:79076355-79076374	None:intergenic	45.0%
!!	TTTCCTGGTAGAGGTGTTTC+TGG	-	chr8.2:79076142-79076161	None:intergenic	45.0%
!!!	TCCTCACGCTTTTTCACGAT+TGG	-	chr8.2:79076250-79076269	None:intergenic	45.0%
	AAAATGTCTCCACTGCGGCA+CGG	+	chr8.2:79076294-79076313	MS.gene36778:CDS	50.0%
	AGCGGTGACATTGGAAGAGT+CGG	-	chr8.2:79075707-79075726	None:intergenic	50.0%
	AGCGTTACGAGCAGTTTCGT+CGG	-	chr8.2:79076107-79076126	None:intergenic	50.0%
	GAGGTTTAAGTCCGGTAGGT+TGG	+	chr8.2:79076381-79076400	MS.gene36778:CDS	50.0%
	GCTGACGCGATTATGTCTGA+CGG	+	chr8.2:79075649-79075668	MS.gene36778:CDS	50.0%
	GGAAGAGTCGGTGGAATTTC+CGG	-	chr8.2:79075695-79075714	None:intergenic	50.0%
	GGAGTTACAGCTGTCAACAG+CGG	-	chr8.2:79075725-79075744	None:intergenic	50.0%
	GTGTGAGGTTTAAGTCCGGT+AGG	+	chr8.2:79076377-79076396	MS.gene36778:CDS	50.0%
	GTTGACAGCTGTAACTCCTC+TGG	+	chr8.2:79075727-79075746	MS.gene36778:CDS	50.0%
	GTTTCGTCGGTGGAGAATGA+AGG	-	chr8.2:79076094-79076113	None:intergenic	50.0%
	TACCGGAACACAGAGTTCTC+CGG	-	chr8.2:79075821-79075840	None:intergenic	50.0%
	TCAATGGCGAAAGGCTCACA+CGG	-	chr8.2:79075607-79075626	None:intergenic	50.0%
	TCCGGTGATGTTCAACTCAC+CGG	+	chr8.2:79075799-79075818	MS.gene36778:CDS	50.0%
	TTCGGCGTTTCATCTAACGG+TGG	+	chr8.2:79076568-79076587	MS.gene36778:CDS	50.0%
!	CTACGTGCTTTTCCTGGTAG+AGG	-	chr8.2:79076151-79076170	None:intergenic	50.0%
!	GAATGAAGGAAGTGTGTCGG+TGG	-	chr8.2:79076080-79076099	None:intergenic	50.0%
!	TCCGGTGAGTTGAACATCAC+CGG	-	chr8.2:79075803-79075822	None:intergenic	50.0%
!	TCTGGTGGTGATAACCGCTT+TGG	+	chr8.2:79075751-79075770	MS.gene36778:CDS	50.0%
!!	CAGAGTGTTTTGGGTCCCAT+CGG	-	chr8.2:79076346-79076365	None:intergenic	50.0%
!!	CGTTTGCTACGTGCTTTTCC+TGG	-	chr8.2:79076157-79076176	None:intergenic	50.0%
!!	CTGGTAGAGGTGTTTCTGGA+CGG	-	chr8.2:79076138-79076157	None:intergenic	50.0%
!!	TAATTTTTCGGTGGCGCGTC+GGG	-	chr8.2:79076226-79076245	None:intergenic	50.0%
	AAGGCTCACACGGTGGTTTC+TGG	-	chr8.2:79075597-79075616	None:intergenic	55.0%
	ACAAAAGTTGGACTCGCCGC+CGG	-	chr8.2:79076421-79076440	None:intergenic	55.0%
	ATACTCCGGCACCAACCTAC+CGG	-	chr8.2:79076395-79076414	None:intergenic	55.0%
	ATCGGTCCTGTTCTCCACTG+CGG	-	chr8.2:79076328-79076347	None:intergenic	55.0%
	CACCGGAGAACTCTGTGTTC+CGG	+	chr8.2:79075816-79075835	MS.gene36778:CDS	55.0%
	CAGTGGAGAACAGGACCGAT+GGG	+	chr8.2:79076328-79076347	MS.gene36778:CDS	55.0%
	CGGCGAAAACCAATTCTCGC+CGG	+	chr8.2:79075555-79075574	MS.gene36778:CDS	55.0%
	CGTCCAGAAACACCTCTACC+AGG	+	chr8.2:79076136-79076155	MS.gene36778:CDS	55.0%
	GACGTTTCTCCGGCGAGAAT+TGG	-	chr8.2:79075567-79075586	None:intergenic	55.0%
	GCTGTCAACAGCGGTGACAT+TGG	-	chr8.2:79075716-79075735	None:intergenic	55.0%
	GGTGACATTGGAAGAGTCGG+TGG	-	chr8.2:79075704-79075723	None:intergenic	55.0%
	GGTGGTGATAACCGCTTTGG+AGG	+	chr8.2:79075754-79075773	MS.gene36778:CDS	55.0%
	GTTACGAGCAGTTTCGTCGG+TGG	-	chr8.2:79076104-79076123	None:intergenic	55.0%
	GTTATCACCACCAGAGCCAG+AGG	-	chr8.2:79075746-79075765	None:intergenic	55.0%
	TCTGCAATGCGTGTGGTGTG+AGG	+	chr8.2:79076362-79076381	MS.gene36778:CDS	55.0%
	TGGTCACCGTGACGTTTCTC+CGG	-	chr8.2:79075577-79075596	None:intergenic	55.0%
	TTCTCGCCGGAGAAACGTCA+CGG	+	chr8.2:79075568-79075587	MS.gene36778:CDS	55.0%
!	AGCTGTAACTCCTCTGGCTC+TGG	+	chr8.2:79075733-79075752	MS.gene36778:CDS	55.0%
!!	AATTTTTCGGTGGCGCGTCG+GGG	-	chr8.2:79076225-79076244	None:intergenic	55.0%
!!	TAAGTCCGGTAGGTTGGTGC+CGG	+	chr8.2:79076387-79076406	MS.gene36778:CDS	55.0%
!!	TGTAACTCCTCTGGCTCTGG+TGG	+	chr8.2:79075736-79075755	MS.gene36778:CDS	55.0%
!!!	CGGCGAGAATTGGTTTTCGC+CGG	-	chr8.2:79075557-79075576	None:intergenic	55.0%
	AAGACGCCGCAGTGGAGAAC+AGG	+	chr8.2:79076319-79076338	MS.gene36778:CDS	60.0%
	ATGGCGAAAGGCTCACACGG+TGG	-	chr8.2:79075604-79075623	None:intergenic	60.0%
	GCAGTGGAGAACAGGACCGA+TGG	+	chr8.2:79076327-79076346	MS.gene36778:CDS	60.0%
	TTGCAACTTCTCTCCGGCGC+CGG	+	chr8.2:79076019-79076038	MS.gene36778:CDS	60.0%
!!	GTTGGTGCCGGAGTATCGAC+CGG	+	chr8.2:79076399-79076418	MS.gene36778:CDS	60.0%
	AAACGCTCACGCGCTGCTCC+AGG	+	chr8.2:79076172-79076191	MS.gene36778:CDS	65.0%
	GCACGGATAAGACGCCGCAG+TGG	+	chr8.2:79076311-79076330	MS.gene36778:CDS	65.0%
	GCGCGTCGGGGAGATGAAGT+AGG	-	chr8.2:79076213-79076232	None:intergenic	65.0%
	GCGTCTTATCCGTGCCGCAG+TGG	-	chr8.2:79076306-79076325	None:intergenic	65.0%
	GGGGAGATGAAGTAGGCGCG+TGG	-	chr8.2:79076206-79076225	None:intergenic	65.0%
	GTCGGTGGCTACTACGGTGC+CGG	+	chr8.2:79075535-79075554	MS.gene36778:CDS	65.0%
!!	CGGTTTAACAGCACCGGCGC+CGG	-	chr8.2:79076035-79076054	None:intergenic	65.0%
	AGGCGCGTGGACCAGTCTCC+TGG	-	chr8.2:79076193-79076212	None:intergenic	70.0%
	CACGCGCTGCTCCAGGAGAC+TGG	+	chr8.2:79076179-79076198	MS.gene36778:CDS	70.0%
	CTCGCCGCCGGTCGATACTC+CGG	-	chr8.2:79076409-79076428	None:intergenic	70.0%
!!	GGTGCCGGAGTATCGACCGG+CGG	+	chr8.2:79076402-79076421	MS.gene36778:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.2	gene	79075514	79076648	79075514	ID=MS.gene36778
chr8.2	mRNA	79075514	79076648	79075514	ID=MS.gene36778.t1;Parent=MS.gene36778
chr8.2	exon	79075514	79075837	79075514	ID=MS.gene36778.t1.exon1;Parent=MS.gene36778.t1
chr8.2	CDS	79075514	79075837	79075514	ID=cds.MS.gene36778.t1;Parent=MS.gene36778.t1
chr8.2	exon	79075941	79076648	79075941	ID=MS.gene36778.t1.exon2;Parent=MS.gene36778.t1
chr8.2	CDS	79075941	79076648	79075941	ID=cds.MS.gene36778.t1;Parent=MS.gene36778.t1

Gene Sequence

>MS.gene36778

ATGGAAGCACAAGATTACTTTGTCGGTGGCTACTACGGTGCCGGCGAAAACCAATTCTCGCCGGAGAAACGTCACGGTGACCAGAAACCACCGTGTGAGCCTTTCGCCATTGATGATTTACTTGATTTCTCCAATGCTGACGCGATTATGTCTGACGGTTTCTTCGATAACAATGTCGCCGGAAATTCCACCGACTCTTCCAATGTCACCGCTGTTGACAGCTGTAACTCCTCTGGCTCTGGTGGTGATAACCGCTTTGGAGGCACAATTGTTCCTTATGGTTTTTCCGGTGATGTTCAACTCACCGGAGAACTCTGTGTTCCGGTAAGTAATAATGTCACTAATTCAGCTTAATTTAACCGTAATTGATGATAGTTGAAGTTCAATTTCGAATTATGAAACTGAATTTGAATTTTACTCTTTACAGTATGATGATATGGCGGAACTGGAATGGCTTTCGAATTTCGTGGAAGATTCATACTCCGCTGAAGAAGAATTGAAAACATTGCAACTTCTCTCCGGCGCCGGTGCTGTTAAACCGCAAACACCGGAATCTTCATCTTCCACCGACACACTTCCTTCATTCTCCACCGACGAAACTGCTCGTAACGCTTCATTTCTCCGTCCAGAAACACCTCTACCAGGAAAAGCACGTAGCAAACGCTCACGCGCTGCTCCAGGAGACTGGTCCACGCGCCTACTTCATCTCCCCGACGCGCCACCGAAAAATTATCCAATCGTGAAAAAGCGTGAGGATCCAAATGTGGAATGTTCTGGAAGAAAATGTCTCCACTGCGGCACGGATAAGACGCCGCAGTGGAGAACAGGACCGATGGGACCCAAAACACTCTGCAATGCGTGTGGTGTGAGGTTTAAGTCCGGTAGGTTGGTGCCGGAGTATCGACCGGCGGCGAGTCCAACTTTTGTATCGGCGAAGCATTCGAATTCTCATAGGAAAGTTTTGGAACTTCGAAGACAGAAAGAGATGCAAAGATCATCACAGCATCATCATCATCATCATCAACATCAACAGCTTATGAGTCACAGTTCAATTTTCGGCGTTTCATCTAACGGTGGAGATGATTTCATCAATTATCATCATCATTGTGGGCCAGAGTTTAGACATGTTATCTAG

Protein sequence

>MS.gene36778.t1

MEAQDYFVGGYYGAGENQFSPEKRHGDQKPPCEPFAIDDLLDFSNADAIMSDGFFDNNVAGNSTDSSNVTAVDSCNSSGSGGDNRFGGTIVPYGFSGDVQLTGELCVPYDDMAELEWLSNFVEDSYSAEEELKTLQLLSGAGAVKPQTPESSSSTDTLPSFSTDETARNASFLRPETPLPGKARSKRSRAAPGDWSTRLLHLPDAPPKNYPIVKKREDPNVECSGRKCLHCGTDKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPAASPTFVSAKHSNSHRKVLELRRQKEMQRSSQHHHHHHQHQQLMSHSSIFGVSSNGGDDFINYHHHCGPEFRHVI