AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059616


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059616.t1 MTR_6g087980 99.522 209 1 0 1 209 1 209 5.22e-157 432
MS.gene059616.t1 MTR_3g078260 76.471 204 45 2 2 205 4 204 3.93e-117 332
MS.gene059616.t1 MTR_4g073250 75.000 200 47 1 1 200 1 197 2.65e-113 322
MS.gene059616.t1 MTR_2g090875 81.461 178 33 0 1 178 1 178 1.20e-109 312
MS.gene059616.t1 MTR_8g075240 79.775 178 36 0 1 178 1 178 2.21e-106 304
MS.gene059616.t1 MTR_4g088055 78.652 178 38 0 1 178 1 178 6.81e-106 303
MS.gene059616.t1 MTR_5g022600 79.213 178 37 0 1 178 1 178 9.25e-105 300
MS.gene059616.t1 MTR_3g078260 87.395 119 15 0 2 120 4 122 2.67e-76 226
MS.gene059616.t1 MTR_3g096350 32.584 178 105 5 7 181 13 178 4.85e-27 102
MS.gene059616.t1 MTR_7g103070 32.967 182 107 5 8 185 18 188 6.05e-26 100
MS.gene059616.t1 MTR_8g093740 32.402 179 106 5 6 181 13 179 3.41e-25 97.8
MS.gene059616.t1 MTR_6g021790 32.597 181 108 5 1 179 1 169 3.81e-25 97.8
MS.gene059616.t1 MTR_2g027660 32.558 172 102 5 1 170 1 160 4.05e-24 95.1
MS.gene059616.t1 MTR_1g115325 31.737 167 101 5 6 170 15 170 1.03e-23 94.4
MS.gene059616.t1 MTR_1g068740 31.737 167 101 5 6 170 15 170 1.56e-23 94.0
MS.gene059616.t1 MTR_1g094220 32.203 177 105 6 7 180 32 196 2.28e-23 92.8
MS.gene059616.t1 MTR_1g068730 31.737 167 101 5 6 170 15 170 2.42e-23 93.2
MS.gene059616.t1 MTR_8g006970 32.335 167 99 5 6 170 8 162 4.77e-23 91.7
MS.gene059616.t1 MTR_8g006970 31.220 205 116 8 6 197 22 214 7.33e-23 92.0
MS.gene059616.t1 MTR_7g100020 31.138 167 102 5 6 170 15 170 9.64e-23 91.7
MS.gene059616.t1 MTR_1g029450 30.726 179 109 5 6 181 17 183 9.95e-23 91.7
MS.gene059616.t1 MTR_1g094220 32.164 171 101 6 7 174 32 190 1.16e-22 91.3
MS.gene059616.t1 MTR_1g094220 32.164 171 101 6 7 174 32 190 1.40e-22 90.9
MS.gene059616.t1 MTR_2g101890 31.250 208 119 7 6 198 10 208 4.30e-22 89.7
MS.gene059616.t1 MTR_1g094220 32.353 170 100 6 7 173 32 189 4.59e-22 90.5
MS.gene059616.t1 MTR_8g103550 32.222 180 107 6 8 184 11 178 6.79e-22 89.0
MS.gene059616.t1 MTR_1g090717 30.244 205 117 8 8 197 17 210 8.00e-22 89.4
MS.gene059616.t1 MTR_1g062760 31.319 182 109 6 8 185 16 185 8.53e-22 89.0
MS.gene059616.t1 MTR_1g097420 29.327 208 123 6 6 198 8 206 1.34e-21 88.6
MS.gene059616.t1 MTR_4g063160 31.953 169 100 6 6 170 15 172 1.38e-21 88.6
MS.gene059616.t1 MTR_7g081700 31.138 167 101 5 6 170 8 162 1.62e-21 88.2
MS.gene059616.t1 MTR_8g031660 31.395 172 104 5 1 170 1 160 1.92e-21 88.2
MS.gene059616.t1 MTR_4g098950 33.939 165 95 5 8 170 11 163 3.45e-21 87.4
MS.gene059616.t1 MTR_8g031870 29.651 172 107 5 1 170 1 160 3.72e-21 87.0
MS.gene059616.t1 MTR_3g069510 31.551 187 114 5 6 190 12 186 5.64e-21 87.0
MS.gene059616.t1 MTR_8g090215 35.152 165 93 5 8 170 11 163 6.91e-21 86.7
MS.gene059616.t1 MTR_8g031830 30.409 171 105 5 1 169 1 159 7.13e-21 86.3
MS.gene059616.t1 MTR_4g012940 30.769 208 120 7 6 198 8 206 1.14e-20 85.9
MS.gene059616.t1 MTR_8g031680 29.651 172 107 5 1 170 1 160 1.76e-20 85.5
MS.gene059616.t1 MTR_4g069850 29.612 206 122 5 6 197 8 204 2.65e-20 85.1
MS.gene059616.t1 MTR_4g064897 29.293 198 123 6 6 201 12 194 3.76e-20 84.7
MS.gene059616.t1 MTR_5g013900 33.939 165 95 5 8 170 11 163 4.20e-20 84.7
MS.gene059616.t1 MTR_2g005500 28.814 177 109 6 1 172 1 165 4.98e-20 84.3
MS.gene059616.t1 MTR_2g096550 28.947 190 120 6 6 191 15 193 5.32e-20 84.3
MS.gene059616.t1 MTR_3g087160 34.545 165 94 5 8 170 11 163 5.47e-20 84.3
MS.gene059616.t1 MTR_2g083860 36.364 121 74 3 6 124 13 132 7.01e-20 84.3
MS.gene059616.t1 MTR_8g089985 29.412 187 118 5 8 192 19 193 7.84e-20 84.3
MS.gene059616.t1 MTR_4g079350 37.500 128 77 3 6 131 13 139 8.74e-20 84.0
MS.gene059616.t1 MTR_8g027220 38.971 136 73 5 8 134 28 162 1.34e-19 84.0
MS.gene059616.t1 MTR_3g086980 28.877 187 119 5 8 192 18 192 1.54e-19 83.6
MS.gene059616.t1 MTR_2g005510 30.435 184 114 5 6 187 15 186 2.71e-19 82.8
MS.gene059616.t1 MTR_4g088090 36.290 124 76 3 6 127 13 135 2.90e-19 82.4
MS.gene059616.t1 MTR_8g036220 30.526 190 118 5 6 193 16 193 2.94e-19 82.8
MS.gene059616.t1 MTR_1g068740 33.077 130 84 3 6 133 15 143 2.97e-19 82.0
MS.gene059616.t1 MTR_1g068730 34.146 123 78 3 6 126 15 136 3.11e-19 81.3
MS.gene059616.t1 MTR_2g075950 36.364 121 74 3 6 124 13 132 3.69e-19 82.4
MS.gene059616.t1 MTR_2g014990 30.270 185 113 6 6 187 13 184 4.79e-19 82.0
MS.gene059616.t1 MTR_7g117910 37.302 126 76 3 8 131 22 146 5.89e-19 81.6
MS.gene059616.t1 MTR_3g064390 31.138 167 97 5 8 170 12 164 1.23e-18 80.5
MS.gene059616.t1 MTR_5g076590 30.539 167 98 5 8 170 12 164 1.75e-18 80.1
MS.gene059616.t1 MTR_1g052475 37.607 117 70 3 8 122 17 132 3.33e-18 79.7
MS.gene059616.t1 MTR_8g092020 28.986 207 123 6 6 198 12 208 4.24e-18 79.3
MS.gene059616.t1 MTR_8g093740 32.117 137 80 3 47 181 21 146 4.47e-18 78.6
MS.gene059616.t1 MTR_1g097420 29.442 197 115 6 17 198 46 233 5.55e-18 79.3
MS.gene059616.t1 MTR_3g096350 33.898 118 74 3 7 121 13 129 7.84e-18 77.4
MS.gene059616.t1 MTR_3g096350 33.898 118 74 3 7 121 13 129 8.49e-18 77.0
MS.gene059616.t1 MTR_2g102060 29.697 165 102 5 8 170 12 164 1.03e-17 78.2
MS.gene059616.t1 MTR_8g107070 30.108 186 116 5 6 189 14 187 1.14e-17 79.3
MS.gene059616.t1 MTR_0262s0050 37.607 117 70 3 8 122 17 132 1.27e-17 78.2
MS.gene059616.t1 MTR_7g051940 29.834 181 113 5 6 184 13 181 1.66e-17 77.8
MS.gene059616.t1 MTR_1g078200 28.421 190 122 5 6 193 14 191 3.14e-17 77.4
MS.gene059616.t1 MTR_3g064390 34.959 123 73 4 8 126 12 131 3.61e-17 75.5
MS.gene059616.t1 MTR_6g079550 27.979 193 125 5 6 196 12 192 9.15e-17 75.9
MS.gene059616.t1 MTR_7g103070 31.387 137 81 3 47 181 2 127 9.39e-17 74.3
MS.gene059616.t1 MTR_7g405790 27.586 203 133 5 6 206 15 205 9.41e-17 75.9
MS.gene059616.t1 MTR_2g090865 35.537 121 75 3 6 124 11 130 3.41e-15 71.6
MS.gene059616.t1 MTR_4g099470 32.609 138 79 5 35 170 13 138 4.65e-15 70.5
MS.gene059616.t1 MTR_3g107717 33.051 118 77 2 7 123 14 130 6.32e-14 68.2
MS.gene059616.t1 MTR_3g107713 33.051 118 77 2 7 123 14 130 6.52e-14 68.2
MS.gene059616.t1 MTR_3g107707 33.051 118 77 2 7 123 14 130 6.86e-14 68.2
MS.gene059616.t1 MTR_6g039490 24.757 206 133 5 6 198 8 204 1.04e-13 67.8
MS.gene059616.t1 MTR_1g072280 27.684 177 118 4 5 180 11 178 4.55e-12 64.7
MS.gene059616.t1 MTR_7g094810 26.738 187 103 3 7 180 9 174 8.91e-12 63.9
MS.gene059616.t1 MTR_7g094810 26.738 187 103 3 7 180 9 174 9.15e-12 63.9
MS.gene059616.t1 MTR_7g094810 26.738 187 103 3 7 180 9 174 9.25e-12 63.5
MS.gene059616.t1 MTR_7g094810 26.738 187 103 3 7 180 9 174 1.06e-11 63.5
MS.gene059616.t1 MTR_7g094810 26.738 187 103 3 7 180 9 174 1.07e-11 63.5
MS.gene059616.t1 MTR_1g082870 27.011 174 119 3 7 180 17 182 7.33e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059616.t1 AT4G28950 91.429 210 15 2 1 209 1 208 2.30e-142 395
MS.gene059616.t1 AT3G48040 77.451 204 45 1 2 205 4 206 2.41e-114 325
MS.gene059616.t1 AT5G62880 82.682 179 31 0 2 180 4 182 1.01e-111 318
MS.gene059616.t1 AT4G35020 79.558 181 37 0 1 181 1 181 1.36e-109 312
MS.gene059616.t1 AT4G35020 79.558 181 37 0 1 181 1 181 1.36e-109 312
MS.gene059616.t1 AT4G35020 79.558 181 37 0 1 181 1 181 1.36e-109 312
MS.gene059616.t1 AT3G51300 80.337 178 35 0 1 178 1 178 1.11e-107 307
MS.gene059616.t1 AT1G75840 80.337 178 35 0 1 178 1 178 1.62e-106 304
MS.gene059616.t1 AT5G45970 78.212 179 39 0 1 179 1 179 2.00e-106 304
MS.gene059616.t1 AT1G20090 80.114 176 35 0 3 178 2 177 8.03e-106 303
MS.gene059616.t1 AT2G17800 79.213 178 37 0 1 178 1 178 1.24e-105 302
MS.gene059616.t1 AT2G17800 79.213 178 37 0 1 178 1 178 1.24e-105 302
MS.gene059616.t1 AT4G35950 78.090 178 39 0 1 178 1 178 2.28e-104 299
MS.gene059616.t1 AT5G62880 82.036 167 30 0 2 168 4 170 9.77e-103 295
MS.gene059616.t1 AT3G48040 83.436 163 27 0 2 164 4 166 2.49e-102 293
MS.gene059616.t1 AT2G44690 70.256 195 54 1 6 200 18 208 8.08e-99 285
MS.gene059616.t1 AT3G51290 79.310 145 30 0 34 178 635 779 5.85e-79 251
MS.gene059616.t1 AT4G35020 83.333 120 20 0 1 120 1 120 8.82e-74 220
MS.gene059616.t1 AT4G35020 83.333 120 20 0 1 120 1 120 8.82e-74 220
MS.gene059616.t1 AT4G35860 33.889 180 104 6 1 177 1 168 1.19e-26 102
MS.gene059616.t1 AT3G54840 33.898 177 102 6 7 180 34 198 2.57e-24 95.5
MS.gene059616.t1 AT4G17170 32.558 172 102 5 1 170 1 160 2.58e-24 95.9
MS.gene059616.t1 AT3G54840 34.524 168 95 6 7 171 34 189 3.82e-24 94.7
MS.gene059616.t1 AT3G54840 33.714 175 101 6 9 180 2 164 1.37e-23 92.8
MS.gene059616.t1 AT5G03530 30.097 206 116 8 8 197 15 208 1.71e-23 93.6
MS.gene059616.t1 AT5G03530 30.097 206 116 8 8 197 15 208 1.71e-23 93.6
MS.gene059616.t1 AT3G46060 31.737 167 101 5 6 170 15 170 1.95e-23 93.6
MS.gene059616.t1 AT3G46060 31.737 167 101 5 6 170 15 170 1.95e-23 93.6
MS.gene059616.t1 AT3G46060 31.737 167 101 5 6 170 15 170 1.95e-23 93.6
MS.gene059616.t1 AT5G45130 34.731 167 91 5 8 170 12 164 3.55e-23 92.4
MS.gene059616.t1 AT4G39890 35.542 166 92 5 8 170 11 164 3.79e-23 92.8
MS.gene059616.t1 AT5G59840 30.682 176 109 5 6 179 15 179 6.09e-23 92.4
MS.gene059616.t1 AT4G17160 30.814 172 105 5 1 170 1 160 1.14e-22 91.3
MS.gene059616.t1 AT1G73640 35.928 167 93 5 6 170 13 167 2.32e-22 91.3
MS.gene059616.t1 AT3G53610 30.114 176 110 5 6 179 15 179 2.47e-22 90.9
MS.gene059616.t1 AT3G53610 30.114 176 110 5 6 179 15 179 2.47e-22 90.9
MS.gene059616.t1 AT3G53610 30.114 176 110 5 6 179 15 179 2.47e-22 90.9
MS.gene059616.t1 AT1G02130 32.335 167 99 5 6 170 8 162 2.49e-22 90.5
MS.gene059616.t1 AT5G45130 34.545 165 90 5 10 170 22 172 3.25e-22 90.1
MS.gene059616.t1 AT1G22740 30.392 204 122 6 6 198 8 202 4.13e-22 89.7
MS.gene059616.t1 AT1G43890 29.050 179 112 5 6 181 13 179 4.19e-22 90.1
MS.gene059616.t1 AT1G43890 29.050 179 112 5 6 181 13 179 4.19e-22 90.1
MS.gene059616.t1 AT1G43890 29.050 179 112 5 6 181 13 179 4.19e-22 90.1
MS.gene059616.t1 AT3G18820 30.583 206 120 6 6 197 8 204 6.04e-22 89.4
MS.gene059616.t1 AT4G19640 33.533 167 93 5 8 170 12 164 9.78e-22 88.6
MS.gene059616.t1 AT4G17530 29.902 204 119 8 6 197 8 199 1.61e-21 88.2
MS.gene059616.t1 AT1G16920 38.843 121 71 3 6 124 13 132 2.37e-21 88.2
MS.gene059616.t1 AT5G47200 29.902 204 119 8 6 197 8 199 2.45e-21 87.8
MS.gene059616.t1 AT1G07410 31.551 187 114 6 6 190 12 186 2.66e-21 87.8
MS.gene059616.t1 AT1G18200 33.333 171 100 5 6 174 13 171 5.51e-21 87.4
MS.gene059616.t1 AT3G11730 30.178 169 104 5 6 172 8 164 7.40e-21 86.7
MS.gene059616.t1 AT5G59150 33.149 181 107 6 6 184 12 180 1.12e-20 86.3
MS.gene059616.t1 AT3G16100 31.401 207 119 7 6 198 8 205 1.22e-20 85.9
MS.gene059616.t1 AT2G22290 35.152 165 93 5 8 170 11 163 3.50e-20 84.7
MS.gene059616.t1 AT5G45750 28.638 213 129 6 6 207 13 213 5.16e-20 84.7
MS.gene059616.t1 AT5G64990 34.545 165 94 5 8 170 9 161 5.66e-20 84.3
MS.gene059616.t1 AT3G09900 31.818 176 107 5 6 179 15 179 6.15e-20 84.3
MS.gene059616.t1 AT4G18430 39.516 124 72 3 6 127 13 135 6.42e-20 84.3
MS.gene059616.t1 AT1G52280 30.097 206 121 7 6 197 8 204 6.56e-20 84.0
MS.gene059616.t1 AT5G03520 32.386 176 106 5 6 179 15 179 8.35e-20 84.0
MS.gene059616.t1 AT3G46830 29.834 181 113 5 6 184 12 180 9.35e-20 84.0
MS.gene059616.t1 AT3G46830 29.834 181 113 5 6 184 12 180 9.35e-20 84.0
MS.gene059616.t1 AT1G09630 31.522 184 112 5 6 187 12 183 1.16e-19 83.6
MS.gene059616.t1 AT3G15060 38.525 122 72 3 8 127 15 135 1.24e-19 83.6
MS.gene059616.t1 AT5G60860 29.891 184 115 4 6 187 13 184 1.53e-19 83.2
MS.gene059616.t1 AT2G44610 33.939 165 95 4 8 170 11 163 1.97e-19 82.8
MS.gene059616.t1 AT4G18800 29.348 184 116 5 6 187 13 184 2.53e-19 82.8
MS.gene059616.t1 AT5G65270 28.723 188 120 5 8 193 19 194 3.31e-19 82.8
MS.gene059616.t1 AT1G06400 36.364 121 74 3 6 124 13 132 3.56e-19 82.4
MS.gene059616.t1 AT4G19640 34.483 145 87 5 8 147 12 153 4.98e-19 81.3
MS.gene059616.t1 AT2G21880 30.270 185 114 5 6 184 9 184 6.10e-19 81.6
MS.gene059616.t1 AT5G10260 33.333 165 96 5 8 170 11 163 7.90e-19 81.3
MS.gene059616.t1 AT5G47520 28.000 200 130 5 2 199 10 197 7.94e-19 81.6
MS.gene059616.t1 AT4G19640 35.938 128 75 4 8 131 12 136 8.01e-19 79.7
MS.gene059616.t1 AT3G12160 38.462 117 69 3 8 122 17 132 1.28e-18 80.9
MS.gene059616.t1 AT1G28550 37.903 124 74 3 6 127 13 135 1.36e-18 80.9
MS.gene059616.t1 AT1G49300 29.126 206 123 6 6 197 8 204 1.49e-18 80.5
MS.gene059616.t1 AT1G49300 29.126 206 123 6 6 197 8 204 1.49e-18 80.5
MS.gene059616.t1 AT2G31680 30.055 183 114 5 6 186 12 182 1.69e-18 80.5
MS.gene059616.t1 AT4G39990 27.624 181 117 5 8 186 19 187 1.72e-18 80.9
MS.gene059616.t1 AT2G43130 29.508 183 115 5 6 186 12 182 2.48e-18 80.1
MS.gene059616.t1 AT2G33870 37.903 124 74 3 6 127 13 135 3.19e-18 79.7
MS.gene059616.t1 AT4G35860 34.586 133 73 5 47 177 2 122 4.25e-18 78.2
MS.gene059616.t1 AT4G09720 28.342 187 119 5 6 186 8 185 4.37e-18 79.3
MS.gene059616.t1 AT1G05810 29.508 183 115 5 6 186 12 182 5.58e-18 79.3
MS.gene059616.t1 AT4G09720 27.604 192 119 4 6 186 8 190 5.80e-18 79.0
MS.gene059616.t1 AT1G05810 29.508 183 115 5 6 186 58 228 8.07e-18 79.7
MS.gene059616.t1 AT5G64990 33.140 172 94 6 8 170 9 168 2.37e-17 77.4
MS.gene059616.t1 AT5G47960 35.897 117 72 3 8 122 17 132 3.69e-17 77.0
MS.gene059616.t1 AT4G09720 26.768 198 119 4 6 186 8 196 4.31e-17 76.6
MS.gene059616.t1 AT1G01200 37.607 117 70 3 8 122 30 145 6.59e-17 76.6
MS.gene059616.t1 AT3G07410 29.282 181 114 5 6 184 12 180 2.07e-16 75.1
MS.gene059616.t1 AT5G55080 30.909 165 99 5 7 170 14 164 3.43e-16 74.3
MS.gene059616.t1 AT5G27540 25.843 178 124 3 3 180 14 183 1.26e-15 75.1
MS.gene059616.t1 AT5G27540 25.843 178 124 3 3 180 14 183 1.26e-15 75.1
MS.gene059616.t1 AT3G09910 28.571 182 114 6 8 185 15 184 5.32e-15 70.9
MS.gene059616.t1 AT3G09910 28.571 182 114 6 8 185 15 184 5.32e-15 70.9
MS.gene059616.t1 AT3G09910 28.571 182 114 6 8 185 15 184 5.32e-15 70.9
MS.gene059616.t1 AT5G03520 32.090 134 79 4 47 179 47 169 2.03e-14 69.3
MS.gene059616.t1 AT3G09910 29.480 173 106 6 8 176 15 175 2.63e-14 68.9
MS.gene059616.t1 AT3G09910 29.480 173 106 6 8 176 15 175 2.63e-14 68.9
MS.gene059616.t1 AT5G59150 33.094 139 80 5 47 184 3 129 3.68e-14 67.8
MS.gene059616.t1 AT5G20020 33.051 118 77 2 7 123 14 130 4.15e-14 68.9
MS.gene059616.t1 AT5G55190 33.051 118 77 2 7 123 14 130 5.30e-14 68.6
MS.gene059616.t1 AT5G20010 33.051 118 77 2 7 123 14 130 6.30e-14 68.2
MS.gene059616.t1 AT3G63150 28.571 175 115 5 7 180 15 180 2.22e-13 68.6
MS.gene059616.t1 AT2G21880 29.697 165 101 5 26 184 4 159 3.44e-13 65.9
MS.gene059616.t1 AT2G21880 29.697 165 101 5 26 184 4 159 3.44e-13 65.9

Find 47 sgRNAs with CRISPR-Local

Find 171 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATGGAAGCATTGTGAATT+TGG 0.222822 6.2:-87376272 MS.gene059616:CDS
CTTGGCATTTCTTTCCTCCT+TGG 0.280179 6.2:+87374183 None:intergenic
GCATTGTGAATTTGGGACTA+TGG 0.282030 6.2:-87376264 MS.gene059616:CDS
ACAAGAACAATAGGTACATT+AGG 0.299783 6.2:+87374781 None:intergenic
GTTCTTGTTGGTACAAAGTT+AGG 0.299968 6.2:-87374766 MS.gene059616:intron
AATGTACCTATTGTTCTTGT+TGG 0.323342 6.2:-87374778 MS.gene059616:CDS
TACAGTGGGAAATTTGTTAC+TGG 0.346209 6.2:+87376946 None:intergenic
GGGGCGAATCTACGCAATTC+TGG 0.349508 6.2:+87374802 None:intergenic
CAAGAACAATAGGTACATTA+GGG 0.361461 6.2:+87374782 None:intergenic
AGGTTGGAGAACAACCTTAA+TGG 0.368247 6.2:+87374206 None:intergenic
TCAACCTGCTATAATCTTCT+TGG 0.373752 6.2:+87376100 None:intergenic
GGCATTTCTTTCCTCCTTGG+AGG 0.381404 6.2:+87374186 None:intergenic
TTTGTACCAACAAGAACAAT+AGG 0.394922 6.2:+87374772 None:intergenic
TTTCTTTCCTCCTTGGAGGT+TGG 0.434085 6.2:+87374190 None:intergenic
CACTTACACAAACGAGCAAC+CGG 0.448127 6.2:+87374140 None:intergenic
CTATGAAAATGTTCTTAAGA+AGG 0.449203 6.2:-87376013 MS.gene059616:intron
TTGAGGCCACTGAGCTATAG+AGG 0.451519 6.2:-87376081 MS.gene059616:CDS
GAAGAACTGAGGAAACAAAT+TGG 0.458019 6.2:-87374416 MS.gene059616:CDS
AAGAAATGCCAAGGAAGAAA+AGG 0.469586 6.2:-87374173 MS.gene059616:CDS
GATGGAAGCATTGTGAATTT+GGG 0.471347 6.2:-87376271 MS.gene059616:CDS
CATTGTGAATTTGGGACTAT+GGG 0.489001 6.2:-87376263 MS.gene059616:CDS
ATGCAGCTCGAAGACTCAAC+AGG 0.495930 6.2:-87374375 MS.gene059616:intron
CAGGCCAAGAAGATTATAGC+AGG 0.520528 6.2:-87376104 MS.gene059616:CDS
CAAGGAAGAAAAGGCAAAGA+AGG 0.532454 6.2:-87374164 MS.gene059616:CDS
TGGGTATTTCGCTGATCACA+CGG 0.534095 6.2:-87374622 MS.gene059616:CDS
ACTGTTGGTGATGGTGCTGT+TGG 0.537659 6.2:-87376995 MS.gene059616:CDS
AAGAAAAGGCAAAGAAGGTC+CGG 0.538145 6.2:-87374159 MS.gene059616:CDS
TTCATTAAATGTGTCACTGT+TGG 0.541909 6.2:-87377010 MS.gene059616:CDS
TAATGTTATAACATCGGCTG+AGG 0.555932 6.2:-87374595 MS.gene059616:intron
TACTGCAGGGGTATTGTGTG+TGG 0.556494 6.2:-87373499 MS.gene059616:intron
CTAAAATTATCAAATACTGT+TGG 0.567683 6.2:+87376310 None:intergenic
TAGATCTTCGTGAAGATCGT+GGG 0.575680 6.2:-87374641 MS.gene059616:CDS
AGTGCAAATGTAGCTGTGGA+TGG 0.578876 6.2:-87376289 MS.gene059616:CDS
AAGAAGATTATAGCAGGTTG+AGG 0.589934 6.2:-87376098 MS.gene059616:CDS
AAATGTGTCACTGTTGGTGA+TGG 0.594720 6.2:-87377004 MS.gene059616:CDS
TGCAGGGGTATTGTGTGTGG+AGG 0.599349 6.2:-87373496 MS.gene059616:intron
AGGTTGTTCTCCAACCTCCA+AGG 0.601575 6.2:-87374200 MS.gene059616:CDS
CAAGGAGGAAAGAAATGCCA+AGG 0.611296 6.2:-87374182 MS.gene059616:CDS
TTAGATCTTCGTGAAGATCG+TGG 0.614731 6.2:-87374642 MS.gene059616:intron
TTGGGACTATGGGACACTGC+AGG 0.615110 6.2:-87376253 MS.gene059616:intron
GGGTATTTCGCTGATCACAC+GGG 0.620364 6.2:-87374621 MS.gene059616:CDS
GGGATATAATGTTATAACAT+CGG 0.624206 6.2:-87374601 MS.gene059616:CDS
CTTTGTAGGGAGAAGAACTG+AGG 0.678121 6.2:-87374427 MS.gene059616:intron
TCTGCTCCTCTATAGCTCAG+TGG 0.686899 6.2:+87376075 None:intergenic
TTGTTCTCCAACCTCCAAGG+AGG 0.708915 6.2:-87374197 MS.gene059616:CDS
CGAGCTGCATTCGATGTACG+CGG 0.710580 6.2:+87374388 None:intergenic
AAGAACAATAGGTACATTAG+GGG 0.717784 6.2:+87374783 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTAATTTTT+GGG - chr6.2:87374160-87374179 MS.gene059616:CDS 0.0%
!!! TTTTTTTTTTTTTTAATTTT+TGG - chr6.2:87374159-87374178 MS.gene059616:CDS 0.0%
!! AAAGATCAAAAATTAAAAAA+TGG + chr6.2:87373643-87373662 None:intergenic 10.0%
!! AAGATCAAAAATTAAAAAAT+GGG + chr6.2:87373642-87373661 None:intergenic 10.0%
!! AATTATCAAATAAATTGATA+GGG - chr6.2:87375121-87375140 MS.gene059616:intron 10.0%
!! ATTATAAAAATTACAGAAAT+AGG + chr6.2:87375459-87375478 None:intergenic 10.0%
!! TAATTATCAAATAAATTGAT+AGG - chr6.2:87375120-87375139 MS.gene059616:intron 10.0%
!! TAGGAAATTTATATAATATA+TGG + chr6.2:87373608-87373627 None:intergenic 10.0%
!!! AAAATTTATTGATTAGAAAA+AGG - chr6.2:87374322-87374341 MS.gene059616:intron 10.0%
!!! ACATTTTTTATAAACTTTTT+CGG - chr6.2:87373773-87373792 MS.gene059616:intron 10.0%
!! AATGTAATCTTAAACATAAA+TGG - chr6.2:87375284-87375303 MS.gene059616:intron 15.0%
!! AGATCAAAAATTAAAAAATG+GGG + chr6.2:87373641-87373660 None:intergenic 15.0%
!! ATGATTCAATTTCAAATTAT+AGG + chr6.2:87376406-87376425 None:intergenic 15.0%
!! ATGTAATCTTAAACATAAAT+GGG - chr6.2:87375285-87375304 MS.gene059616:intron 15.0%
!! TATTTATTATGGTTTCAAAT+AGG + chr6.2:87375098-87375117 None:intergenic 15.0%
!! TGATTAGTATATATAGTTTA+CGG - chr6.2:87376510-87376529 MS.gene059616:intron 15.0%
!!! AAAAGAAAAAGTATTATAAG+AGG + chr6.2:87374546-87374565 None:intergenic 15.0%
!!! ATTTTCTTTTTGTTGAAAAA+AGG + chr6.2:87374307-87374326 None:intergenic 15.0%
!!! CATTTTCTTTAAATTAGTTA+TGG + chr6.2:87376707-87376726 None:intergenic 15.0%
!!! CTAATTCAAAATTAATTTGA+AGG - chr6.2:87376486-87376505 MS.gene059616:intron 15.0%
!! AAAAAGAAGAAATATTACAG+TGG + chr6.2:87373580-87373599 None:intergenic 20.0%
!! AAAAGAAGAAATATTACAGT+GGG + chr6.2:87373579-87373598 None:intergenic 20.0%
!! CAAACTTTACCTTTATAATT+AGG - chr6.2:87375328-87375347 MS.gene059616:intron 20.0%
!! CATAAACACTTATATGATAA+TGG - chr6.2:87374824-87374843 MS.gene059616:intron 20.0%
!! CTAAAATTATCAAATACTGT+TGG + chr6.2:87374201-87374220 None:intergenic 20.0%
!! TAAACAAGTTAATCTTTGTA+GGG - chr6.2:87376068-87376087 MS.gene059616:CDS 20.0%
!! TATTAAAATCCAATTATGTC+AGG - chr6.2:87376174-87376193 MS.gene059616:intron 20.0%
!! TCTAAATATGTTAATGTTAC+TGG - chr6.2:87374135-87374154 MS.gene059616:intron 20.0%
!! TGATCACTTATACTAATATA+GGG - chr6.2:87373989-87374008 MS.gene059616:intron 20.0%
!! TGATTAGAAAAAGGAAAAAA+AGG - chr6.2:87374331-87374350 MS.gene059616:intron 20.0%
!! TGCTATTATTAACGTATATT+AGG - chr6.2:87376779-87376798 MS.gene059616:intron 20.0%
!! TGTAATCTTAAACATAAATG+GGG - chr6.2:87375286-87375305 MS.gene059616:intron 20.0%
!! TTAAACAAGTTAATCTTTGT+AGG - chr6.2:87376067-87376086 MS.gene059616:CDS 20.0%
!!! ATTTTGTACTTTTATTGATC+TGG - chr6.2:87375785-87375804 MS.gene059616:intron 20.0%
!!! TAAATTTGACAACACATTTT+TGG - chr6.2:87375356-87375375 MS.gene059616:intron 20.0%
!!! TATGATTTTTGATTTGTGTA+AGG - chr6.2:87374062-87374081 MS.gene059616:intron 20.0%
!!! TTTTCTCTTGTTTCTATTTT+TGG - chr6.2:87374577-87374596 MS.gene059616:intron 20.0%
!!! TTTTTTTTTTCAATGTTTGC+AGG - chr6.2:87374385-87374404 MS.gene059616:CDS 20.0%
! AATTAAGCACATGATAACAT+TGG + chr6.2:87374027-87374046 None:intergenic 25.0%
! AGTAAGGAAATTAGATTGTT+AGG - chr6.2:87376545-87376564 MS.gene059616:intron 25.0%
! ATACGTTAATAATAGCAAAG+AGG + chr6.2:87376776-87376795 None:intergenic 25.0%
! CTATGAAAATGTTCTTAAGA+AGG - chr6.2:87374495-87374514 MS.gene059616:intron 25.0%
! CTGATCACTTATACTAATAT+AGG - chr6.2:87373988-87374007 MS.gene059616:intron 25.0%
! GGGATATAATGTTATAACAT+CGG - chr6.2:87375907-87375926 MS.gene059616:intron 25.0%
! GTTATAACAGTATAAAACGA+TGG + chr6.2:87375966-87375985 None:intergenic 25.0%
! TAGATTCACAAAAATCAGTT+CGG + chr6.2:87376747-87376766 None:intergenic 25.0%
! TGAATCATACTTCTAATCAT+TGG - chr6.2:87376418-87376437 MS.gene059616:intron 25.0%
! TTGTAGATAGAAACTATAGA+AGG - chr6.2:87374935-87374954 MS.gene059616:intron 25.0%
! TTTAGTGCACCTAATTATAA+AGG + chr6.2:87375340-87375359 None:intergenic 25.0%
! TTTCATAAGTTCTTCAAGAT+AGG - chr6.2:87373801-87373820 MS.gene059616:intron 25.0%
!! TTTTTAACAGTCCTGATATT+CGG + chr6.2:87376824-87376843 None:intergenic 25.0%
!! TTTTTCTCTTGATAGGTTAA+AGG + chr6.2:87375812-87375831 None:intergenic 25.0%
!!! AAAATGGGGAAACTTTTTTT+AGG + chr6.2:87373627-87373646 None:intergenic 25.0%
!!! ACGGAGATTTTTTAATAGTA+AGG - chr6.2:87376529-87376548 MS.gene059616:intron 25.0%
!!! TCAAGTTGAAAATGAATCTT+TGG - chr6.2:87375177-87375196 MS.gene059616:intron 25.0%
!!! TTTTTTAATTTTTGGGTTGC+AGG - chr6.2:87374167-87374186 MS.gene059616:CDS 25.0%
!!! TTTTTTGTTTTCTCTTTCAG+TGG - chr6.2:87375680-87375699 MS.gene059616:intron 25.0%
AAAAAAACGAACCGAATATC+AGG - chr6.2:87376810-87376829 MS.gene059616:intron 30.0%
AAATTAGATTGTTAGGCAAG+TGG - chr6.2:87376552-87376571 MS.gene059616:intron 30.0%
AACATGAAGAAATCCAAACA+AGG + chr6.2:87374632-87374651 None:intergenic 30.0%
AAGAACAATAGGTACATTAG+GGG + chr6.2:87375728-87375747 None:intergenic 30.0%
AATAAGCTGTTTATCCAAAC+AGG - chr6.2:87373927-87373946 MS.gene059616:intron 30.0%
AATGTACCTATTGTTCTTGT+TGG - chr6.2:87375730-87375749 MS.gene059616:intron 30.0%
ACAAGAACAATAGGTACATT+AGG + chr6.2:87375730-87375749 None:intergenic 30.0%
ACATGAAGAAATCCAAACAA+GGG + chr6.2:87374631-87374650 None:intergenic 30.0%
ACTATATACTATGAGCTAGT+TGG - chr6.2:87373691-87373710 MS.gene059616:intron 30.0%
ATAAGCTGTTTATCCAAACA+GGG - chr6.2:87373928-87373947 MS.gene059616:intron 30.0%
CAAGAACAATAGGTACATTA+GGG + chr6.2:87375729-87375748 None:intergenic 30.0%
CATAAAAGACCTGACATAAT+TGG + chr6.2:87376186-87376205 None:intergenic 30.0%
GTTGAAAATGAATCTTTGGT+TGG - chr6.2:87375181-87375200 MS.gene059616:intron 30.0%
TCGATTCAAAAACACAGAAT+CGG + chr6.2:87376683-87376702 None:intergenic 30.0%
TGGTGAGAATGATCTATTAT+TGG + chr6.2:87375547-87375566 None:intergenic 30.0%
TTGTGTAAGGATTCTAATTC+TGG - chr6.2:87374075-87374094 MS.gene059616:intron 30.0%
TTTCTCTTTGCAGAATCTTA+TGG - chr6.2:87376217-87376236 MS.gene059616:intron 30.0%
TTTGTACCAACAAGAACAAT+AGG + chr6.2:87375739-87375758 None:intergenic 30.0%
! AGGTCTTTTATGATGTATGT+TGG - chr6.2:87376194-87376213 MS.gene059616:intron 30.0%
! TAGTCTCTTTTTCTCTTGAT+AGG + chr6.2:87375819-87375838 None:intergenic 30.0%
! TTCAAATTGGTTTAGCAGTT+TGG + chr6.2:87376848-87376867 None:intergenic 30.0%
! TTCATTAAATGTGTCACTGT+TGG - chr6.2:87373498-87373517 MS.gene059616:intron 30.0%
!! ATAAGTTTTGTGAGACTGTT+TGG - chr6.2:87373746-87373765 MS.gene059616:intron 30.0%
!! TAATGTTCTTAGCTCTAGAT+CGG - chr6.2:87375641-87375660 MS.gene059616:intron 30.0%
!! TGTTTTTGATACTGCCATTA+AGG - chr6.2:87376288-87376307 MS.gene059616:CDS 30.0%
!! TTTGCATGTTGGTGATAAAT+GGG - chr6.2:87374897-87374916 MS.gene059616:intron 30.0%
!!! CTATCTTCTTTTTTACTGCA+GGG - chr6.2:87376996-87377015 MS.gene059616:CDS 30.0%
!!! TATCTTCTTTTTTACTGCAG+GGG - chr6.2:87376997-87377016 MS.gene059616:CDS 30.0%
!!! TCTATCTTCTTTTTTACTGC+AGG - chr6.2:87376995-87377014 MS.gene059616:CDS 30.0%
AAGAAATGCCAAGGAAGAAA+AGG - chr6.2:87376335-87376354 MS.gene059616:intron 35.0%
AAGAAGATTATAGCAGGTTG+AGG - chr6.2:87374410-87374429 MS.gene059616:CDS 35.0%
ACAAACCATTAACACGAGTT+TGG + chr6.2:87376628-87376647 None:intergenic 35.0%
AGATAGAAGTCAACAAGCTA+TGG + chr6.2:87375216-87375235 None:intergenic 35.0%
ATCATCAAGTAGCTATCACT+AGG + chr6.2:87375243-87375262 None:intergenic 35.0%
ATCGAGCGTTTATATCAGTT+TGG + chr6.2:87376657-87376676 None:intergenic 35.0%
CATAACATAGAGATCTACCT+CGG - chr6.2:87375565-87375584 MS.gene059616:intron 35.0%
CTTATTTCCATAAGCTTGTC+AGG - chr6.2:87374721-87374740 MS.gene059616:intron 35.0%
GAAGAACTGAGGAAACAAAT+TGG - chr6.2:87376092-87376111 MS.gene059616:CDS 35.0%
GAGGAAGCAAAGAAATAGTT+AGG + chr6.2:87374527-87374546 None:intergenic 35.0%
GTACAAAGTTAGGTAAGCAA+GGG - chr6.2:87375752-87375771 MS.gene059616:intron 35.0%
GTTCTTGTTGGTACAAAGTT+AGG - chr6.2:87375742-87375761 MS.gene059616:intron 35.0%
TCAACCTGCTATAATCTTCT+TGG + chr6.2:87374411-87374430 None:intergenic 35.0%
TGAAAAGAACTGAACTGTGA+TGG - chr6.2:87376874-87376893 MS.gene059616:intron 35.0%
TTGTTCATATAGACCCTGTT+TGG + chr6.2:87373944-87373963 None:intergenic 35.0%
! AGTGATAGCTACTTGATGAT+AGG - chr6.2:87375243-87375262 MS.gene059616:intron 35.0%
! AGTTAGATTTTGCCCTTGTT+TGG - chr6.2:87374616-87374635 MS.gene059616:CDS 35.0%
! CATTGTGAATTTGGGACTAT+GGG - chr6.2:87374245-87374264 MS.gene059616:intron 35.0%
! GTGATAGCTACTTGATGATA+GGG - chr6.2:87375244-87375263 MS.gene059616:intron 35.0%
! TAATGTTATAACATCGGCTG+AGG - chr6.2:87375913-87375932 MS.gene059616:intron 35.0%
! TTTTAGTGCAAATGTAGCTG+TGG - chr6.2:87374215-87374234 MS.gene059616:CDS 35.0%
!! GATGGAAGCATTGTGAATTT+GGG - chr6.2:87374237-87374256 MS.gene059616:intron 35.0%
!! GTTTGCATGTTGGTGATAAA+TGG - chr6.2:87374896-87374915 MS.gene059616:intron 35.0%
!! TACAGTGGGAAATTTGTTAC+TGG + chr6.2:87373565-87373584 None:intergenic 35.0%
!! TCATTGGTCTTTGCATTTGA+TGG - chr6.2:87376434-87376453 MS.gene059616:intron 35.0%
AACATGCAAACACAGGTTCA+TGG + chr6.2:87374887-87374906 None:intergenic 40.0%
AAGAAAAGGCAAAGAAGGTC+CGG - chr6.2:87376349-87376368 MS.gene059616:intron 40.0%
AAGCTTTCCTGACAAGCTTA+TGG + chr6.2:87374731-87374750 None:intergenic 40.0%
ACTGACCAAACTCGTGTTAA+TGG - chr6.2:87376620-87376639 MS.gene059616:intron 40.0%
AGGTTGGAGAACAACCTTAA+TGG + chr6.2:87376305-87376324 None:intergenic 40.0%
ATGAACCTGTGTTTGCATGT+TGG - chr6.2:87374886-87374905 MS.gene059616:intron 40.0%
CAAGGAAGAAAAGGCAAAGA+AGG - chr6.2:87376344-87376363 MS.gene059616:intron 40.0%
CGAGGTAGATCTCTATGTTA+TGG + chr6.2:87375567-87375586 None:intergenic 40.0%
GCTTATTTGATGTGTTAGCG+AGG - chr6.2:87376013-87376032 MS.gene059616:intron 40.0%
GGTACAAAGTTAGGTAAGCA+AGG - chr6.2:87375751-87375770 MS.gene059616:intron 40.0%
GTTTCGTCAAACTGTTGTTG+TGG + chr6.2:87376602-87376621 None:intergenic 40.0%
TAGAAGTCAACAAGCTATGG+TGG + chr6.2:87375213-87375232 None:intergenic 40.0%
TAGATCTTCGTGAAGATCGT+GGG - chr6.2:87375867-87375886 MS.gene059616:intron 40.0%
TATCACCAACATGCAAACAC+AGG + chr6.2:87374894-87374913 None:intergenic 40.0%
TCACTTGTGACACTGTTTGA+GGG - chr6.2:87374654-87374673 MS.gene059616:intron 40.0%
TTAGATCTTCGTGAAGATCG+TGG - chr6.2:87375866-87375885 MS.gene059616:intron 40.0%
TTAGGCAAGTGGTTCAATTC+AGG - chr6.2:87376563-87376582 MS.gene059616:intron 40.0%
TTCACTTGTGACACTGTTTG+AGG - chr6.2:87374653-87374672 MS.gene059616:intron 40.0%
! AAATGTGTCACTGTTGGTGA+TGG - chr6.2:87373504-87373523 MS.gene059616:intron 40.0%
! ACTCGTGTTAATGGTTTGTC+TGG - chr6.2:87376629-87376648 MS.gene059616:intron 40.0%
! CAGTTCAGTTCTTTTCAGTG+CGG + chr6.2:87376871-87376890 None:intergenic 40.0%
! CTTCTTTGCCTTTTCTTCCT+TGG + chr6.2:87376346-87376365 None:intergenic 40.0%
! CTTTTCAGTGCGGTTCAAAT+TGG + chr6.2:87376861-87376880 None:intergenic 40.0%
! GCATTGTGAATTTGGGACTA+TGG - chr6.2:87374244-87374263 MS.gene059616:intron 40.0%
! GTTTTGTGAGACTGTTTGGA+AGG - chr6.2:87373750-87373769 MS.gene059616:intron 40.0%
! TTATAACATCGGCTGAGGTT+TGG - chr6.2:87375918-87375937 MS.gene059616:intron 40.0%
! TTGGTGATAAATGGGAGGAA+AGG - chr6.2:87374905-87374924 MS.gene059616:intron 40.0%
!! GGATGGAAGCATTGTGAATT+TGG - chr6.2:87374236-87374255 MS.gene059616:intron 40.0%
ACATCTCAGATTCACGTGAC+AGG + chr6.2:87376932-87376951 None:intergenic 45.0%
AGTGCAAATGTAGCTGTGGA+TGG - chr6.2:87374219-87374238 MS.gene059616:CDS 45.0%
CAAGGAGGAAAGAAATGCCA+AGG - chr6.2:87376326-87376345 MS.gene059616:intron 45.0%
CACTTACACAAACGAGCAAC+CGG + chr6.2:87376371-87376390 None:intergenic 45.0%
CAGGCCAAGAAGATTATAGC+AGG - chr6.2:87374404-87374423 MS.gene059616:CDS 45.0%
CTTGGCATTTCTTTCCTCCT+TGG + chr6.2:87376328-87376347 None:intergenic 45.0%
CTTTGTAGGGAGAAGAACTG+AGG - chr6.2:87376081-87376100 MS.gene059616:CDS 45.0%
GCAAGTGGTTCAATTCAGGA+AGG - chr6.2:87376567-87376586 MS.gene059616:intron 45.0%
TGCAAACACAGGTTCATGGT+TGG + chr6.2:87374883-87374902 None:intergenic 45.0%
TGGGTATTTCGCTGATCACA+CGG - chr6.2:87375886-87375905 MS.gene059616:intron 45.0%
TTTCTTTCCTCCTTGGAGGT+TGG + chr6.2:87376321-87376340 None:intergenic 45.0%
!! GCATGTTGGTGATAAATGGG+AGG - chr6.2:87374900-87374919 MS.gene059616:intron 45.0%
!! TGATAATTATTTATTTATTA+TGG + chr6.2:87375109-87375128 None:intergenic 5.0%
!!! GTAATTTTTATAATAATTTT+GGG - chr6.2:87375465-87375484 MS.gene059616:intron 5.0%
!!! TGTAATTTTTATAATAATTT+TGG - chr6.2:87375464-87375483 MS.gene059616:intron 5.0%
AGGTTGTTCTCCAACCTCCA+AGG - chr6.2:87376308-87376327 MS.gene059616:CDS 50.0%
ATGCAGCTCGAAGACTCAAC+AGG - chr6.2:87376133-87376152 MS.gene059616:intron 50.0%
GGCATTTCTTTCCTCCTTGG+AGG + chr6.2:87376325-87376344 None:intergenic 50.0%
GGGTATTTCGCTGATCACAC+GGG - chr6.2:87375887-87375906 MS.gene059616:intron 50.0%
TCTGCTCCTCTATAGCTCAG+TGG + chr6.2:87374436-87374455 None:intergenic 50.0%
TTGAGGCCACTGAGCTATAG+AGG - chr6.2:87374427-87374446 MS.gene059616:intron 50.0%
TTGTTCTCCAACCTCCAAGG+AGG - chr6.2:87376311-87376330 MS.gene059616:CDS 50.0%
! AGGTAGCTTGCGAACTCAAC+TGG + chr6.2:87376912-87376931 None:intergenic 50.0%
!! ACTGTTGGTGATGGTGCTGT+TGG - chr6.2:87373513-87373532 MS.gene059616:intron 50.0%
!! TACTGCAGGGGTATTGTGTG+TGG - chr6.2:87377009-87377028 MS.gene059616:CDS 50.0%
AGATCTACCTCGGCATTGCG+AGG - chr6.2:87375575-87375594 MS.gene059616:intron 55.0%
CGAGCTGCATTCGATGTACG+CGG + chr6.2:87376123-87376142 None:intergenic 55.0%
GGGGCGAATCTACGCAATTC+TGG + chr6.2:87375709-87375728 None:intergenic 55.0%
TTGGGACTATGGGACACTGC+AGG - chr6.2:87374255-87374274 MS.gene059616:intron 55.0%
!! TGCAGGGGTATTGTGTGTGG+AGG - chr6.2:87377012-87377031 MS.gene059616:CDS 55.0%
CAGAAAGCCTCGCAATGCCG+AGG + chr6.2:87375585-87375604 None:intergenic 60.0%
CTCGGCATTGCGAGGCTTTC+TGG - chr6.2:87375583-87375602 MS.gene059616:intron 60.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 87373483 87377047 87373483 ID=MS.gene059616
chr6.2 mRNA 87373483 87377047 87373483 ID=MS.gene059616.t1;Parent=MS.gene059616
chr6.2 exon 87376949 87377047 87376949 ID=MS.gene059616.t1.exon1;Parent=MS.gene059616.t1
chr6.2 CDS 87376949 87377047 87376949 ID=cds.MS.gene059616.t1;Parent=MS.gene059616.t1
chr6.2 exon 87376254 87376341 87376254 ID=MS.gene059616.t1.exon2;Parent=MS.gene059616.t1
chr6.2 CDS 87376254 87376341 87376254 ID=cds.MS.gene059616.t1;Parent=MS.gene059616.t1
chr6.2 exon 87376014 87376123 87376014 ID=MS.gene059616.t1.exon3;Parent=MS.gene059616.t1
chr6.2 CDS 87376014 87376123 87376014 ID=cds.MS.gene059616.t1;Parent=MS.gene059616.t1
chr6.2 exon 87374767 87374830 87374767 ID=MS.gene059616.t1.exon4;Parent=MS.gene059616.t1
chr6.2 CDS 87374767 87374830 87374767 ID=cds.MS.gene059616.t1;Parent=MS.gene059616.t1
chr6.2 exon 87374596 87374660 87374596 ID=MS.gene059616.t1.exon5;Parent=MS.gene059616.t1
chr6.2 CDS 87374596 87374660 87374596 ID=cds.MS.gene059616.t1;Parent=MS.gene059616.t1
chr6.2 exon 87374376 87374441 87374376 ID=MS.gene059616.t1.exon6;Parent=MS.gene059616.t1
chr6.2 CDS 87374376 87374441 87374376 ID=cds.MS.gene059616.t1;Parent=MS.gene059616.t1
chr6.2 exon 87374147 87374253 87374147 ID=MS.gene059616.t1.exon7;Parent=MS.gene059616.t1
chr6.2 CDS 87374147 87374253 87374147 ID=cds.MS.gene059616.t1;Parent=MS.gene059616.t1
chr6.2 exon 87373483 87373513 87373483 ID=MS.gene059616.t1.exon8;Parent=MS.gene059616.t1
chr6.2 CDS 87373483 87373513 87373483 ID=cds.MS.gene059616.t1;Parent=MS.gene059616.t1
Gene Sequence

>MS.gene059616

ATGAGTGCTTCAAAGTTCATTAAATGTGTCACTGTTGGTGATGGTGCTGTTGGAAAAACTTGCATGCTCATTTGTTACACCAGTAACAAATTTCCCACTGTAATATTTCTTCTTTTTATCATCCATATATTATATAAATTTCCTAAAAAAAGTTTCCCCATTTTTTAATTTTTGATCTTTTATTATTTAGTTGTTTTTCTGTCTTCAAACTATATACTATGAGCTAGTTGGATTGACTTAATTTTCGTTTATCTACTGATATTATAAGTTTTGTGAGACTGTTTGGAAGGACATTTTTTATAAACTTTTTCGGCTTATTTTCATAAGTTCTTCAAGATAGGTTATGACATATACAAAAACAATTTAATTTTATTTAATTTTATATTTTGCTATAAAAATAGCTTTTGTAGCTTATACATAAGTGCTTATTATGATAAGCTGCAAAATAAGCTGTTTATCCAAACAGGGTCTATATGAACAAGATAAATATTTGAACATTTTAATGCTGATCACTTATACTAATATAGGGTCATTTTTTATTCCAATGTTATCATGTGCTTAATTATATCTTTTACAGCTTATGATTTTTGATTTGTGTAAGGATTCTAATTCTGGTAATCTTATGATTTTTTTTTTTTTTGATAATTTTTTTTCTAAATATGTTAATGTTACTGGTTTTTTTTTTTTTTTAATTTTTGGGTTGCAGGATTATATACCAACAGTATTTGATAATTTTAGTGCAAATGTAGCTGTGGATGGAAGCATTGTGAATTTGGGACTATGGGACACTGCAGGTACTTAAAACTTTGTTTTGATTTTTTCCTTTTTTCAACAAAAAGAAAATTTATTGATTAGAAAAAGGAAAAAAAGGAATTTTTTTGTTCATAATTAATTTGATGCTTTTTTTTTTTTCAATGTTTGCAGGCCAAGAAGATTATAGCAGGTTGAGGCCACTGAGCTATAGAGGAGCAGATATATTTGTATTAGCATTTTCATTGATTAGTAGAGCTAGCTATGAAAATGTTCTTAAGAAGGTTCATGCCTAACTATTTCTTTGCTTCCTCTTATAATACTTTTTCTTTTTATTTAATTTATTTTCTCTTGTTTCTATTTTTGGATTCATGTTTTCTAAAAGTTAGATTTTGCCCTTGTTTGGATTTCTTCATGTTTTTCACTTGTGACACTGTTTGAGGGAGTTTATGAAAACAACTTACGACATGTGCATAAACTGTTTTTAGCTTATTTCCATAAGCTTGTCAGGAAAGCTTATGAAAACAACTCATAACTTTATATGAAAACAGTTTAACTATGTTTTATCTTTTGTCAAAGAAATAACTTATACATAAACACTTATATGATAATGGTTTATGTAAGAAACGCTTAATTGAGCTGTTTATCCAACCATGAACCTGTGTTTGCATGTTGGTGATAAATGGGAGGAAAGGAAAATAGTTGTAGATAGAAACTATAGAAGGAAGTTCACAATGCAAAACATTATCTTGTGCTAGATGAAATATGTTGCTTAAAATATTTGTTAATGTTTAGTACTATTTTGTTACAATTGTTAAAAAGTGAAACTTAAAATTTGAAATGCTGAAAGTGTCTCTTGCAACCTATTTGAAACCATAATAAATAAATAATTATCAAATAAATTGATAGGGACATTATGCAGACAATATTTCAAAACATAGAAATCAAGTTGAAAATGAATCTTTGGTTGGTTTTTTCCACCATAGCTTGTTGACTTCTATCTTATGCCTAGTGATAGCTACTTGATGATAGGGAAAGAAAATTATTAGCTAATGTAATCTTAAACATAAATGGGGTGTCATATTTTATTAATTTCAAACTTTACCTTTATAATTAGGTGCACTAAATTTGACAACACATTTTTGGTAAAGATATCACTAAAATTTACTATTGATAATTGATAGAATGATGCATTTTCTTTAAGCATAAGTTTGCAATTGTTTCCTATTTCTGTAATTTTTATAATAATTTTGGGTCTGCTTATGACTTACACTGTCTAACAATTGCACATTTTCATTGTATTCATAATTACCAATAATAGATCATTCTCACCATAACATAGAGATCTACCTCGGCATTGCGAGGCTTTCTGGTGTATCAGAACACATAACATTCATGCACATGCATTTAATGTTCTTAGCTCTAGATCGGTTATTCATTTCGACTTTTTTTTGTTTTCTCTTTCAGTGGATGCCAGAATTGCGTAGATTCGCCCCTAATGTACCTATTGTTCTTGTTGGTACAAAGTTAGGTAAGCAAGGGCTCATACAAAATTTTGTACTTTTATTGATCTGGTCCTTTAACCTATCAAGAGAAAAAGAGACTAATGACATAAAGTATTGAATTGTTGATTTTAGATCTTCGTGAAGATCGTGGGTATTTCGCTGATCACACGGGATATAATGTTATAACATCGGCTGAGGTTTGGATTCTTCATACTTGTTTTTTCTCCATCGTTTTATACTGTTATAACACTTGATTGATGTTGCATCGTTCAATAGCTTATTTGATGTGTTAGCGAGGTTCGTTAAGATTAACATCTTAAGCGCATTTATTAAACAAGTTAATCTTTGTAGGGAGAAGAACTGAGGAAACAAATTGGTGCAGCCGCGTACATCGAATGCAGCTCGAAGACTCAACAGGTAGCATGTTTAAATTTGATATTAAAATCCAATTATGTCAGGTCTTTTATGATGTATGTTGGTTTCTCTTTGCAGAATCTTATGGCAAATAGAATCTAATTTAATGTGTTTATATGATTTAGAATGTGAAAGCTGTTTTTGATACTGCCATTAAGGTTGTTCTCCAACCTCCAAGGAGGAAAGAAATGCCAAGGAAGAAAAGGCAAAGAAGGTCCGGTTGCTCGTTTGTGTAAGTGTCGTCTCTTGCTCCTATAATTTGAAATTGAATCATACTTCTAATCATTGGTCTTTGCATTTGATGGATGTTATTCTCATATTTACTTATATAGTTCTAATTCAAAATTAATTTGAAGGTTGATTAGTATATATAGTTTACGGAGATTTTTTAATAGTAAGGAAATTAGATTGTTAGGCAAGTGGTTCAATTCAGGAAGGAAAACTGAACCACAACAACAGTTTGACGAAACTGACCAAACTCGTGTTAATGGTTTGTCTGGTACCAAACTGATATAAACGCTCGATGCTCCGATTCTGTGTTTTTGAATCGAACCATAACTAATTTAAAGAAAATGAAGCGCACTTATTCAAACCGAACTGATTTTTGTGAATCTAATTTTACCTCTTTGCTATTATTAACGTATATTAGGACTGTTAAAAAAAAACGAACCGAATATCAGGACTGTTAAAAAACCAAACTGCTAAACCAATTTGAACCGCACTGAAAAGAACTGAACTGTGATGGATAGTTCACGAACCAGTTGAGTTCGCAAGCTACCTGTCACGTGAATCTGAGATGTTATCGTACACTTGTTTACATTTGACTGTATGTTAACACTAACATCTATCTTCTTTTTTACTGCAGGGGTATTGTGTGTGGAGGTTGTGCTGCTTAA

Protein sequence

>MS.gene059616.t1

MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGSIVNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKLDLREDRGYFADHTGYNVITSAEGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRKEMPRKKRQRRSGCSFVGIVCGGCAA