Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37074.t1 | XP_013467665.1 | 96.6 | 293 | 7 | 1 | 1 | 290 | 1 | 293 | 3.10E-160 | 574.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37074.t1 | Q7F8R0 | 58.9 | 299 | 100 | 7 | 4 | 287 | 6 | 296 | 3.4e-86 | 319.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37074.t1 | A0A072VIQ3 | 96.6 | 293 | 7 | 1 | 1 | 290 | 1 | 293 | 2.3e-160 | 574.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene37074.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049669 | MS.gene37074 | -0.803698 | 3.08E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene37074 | -0.806532 | 7.86E-50 | -1.69E-46 |
| MS.gene052586 | MS.gene37074 | -0.803957 | 2.72E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene37074 | 0.838504 | 2.77E-57 | -1.69E-46 |
| MS.gene053647 | MS.gene37074 | -0.809574 | 1.77E-50 | -1.69E-46 |
| MS.gene054291 | MS.gene37074 | 0.817318 | 3.51E-52 | -1.69E-46 |
| MS.gene054467 | MS.gene37074 | -0.804054 | 2.60E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene37074 | -0.852354 | 4.88E-61 | -1.69E-46 |
| MS.gene057026 | MS.gene37074 | -0.819691 | 1.02E-52 | -1.69E-46 |
| MS.gene061040 | MS.gene37074 | 0.80525 | 1.46E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37074.t1 | MTR_1g053960 | 96.587 | 293 | 7 | 1 | 1 | 290 | 1 | 293 | 0.0 | 575 |
| MS.gene37074.t1 | MTR_1g053960 | 96.035 | 227 | 6 | 1 | 67 | 290 | 1 | 227 | 7.79e-159 | 441 |
| MS.gene37074.t1 | MTR_7g093130 | 70.395 | 304 | 70 | 9 | 1 | 287 | 1 | 301 | 9.58e-136 | 386 |
| MS.gene37074.t1 | MTR_1g116940 | 58.462 | 260 | 95 | 6 | 40 | 290 | 3 | 258 | 6.89e-100 | 293 |
| MS.gene37074.t1 | MTR_7g093130 | 70.940 | 234 | 52 | 7 | 67 | 287 | 1 | 231 | 8.40e-100 | 292 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37074.t1 | AT3G12130 | 51.495 | 301 | 81 | 9 | 1 | 290 | 1 | 247 | 3.69e-82 | 248 |
| MS.gene37074.t1 | AT5G06770 | 51.402 | 214 | 88 | 7 | 87 | 290 | 10 | 217 | 1.90e-58 | 186 |
| MS.gene37074.t1 | AT5G06770 | 71.698 | 53 | 15 | 0 | 20 | 72 | 4 | 56 | 7.50e-21 | 89.0 |
| MS.gene37074.t1 | AT5G06770 | 51.402 | 214 | 88 | 7 | 87 | 290 | 32 | 239 | 2.96e-58 | 187 |
| MS.gene37074.t1 | AT5G06770 | 67.949 | 78 | 19 | 2 | 1 | 72 | 1 | 78 | 9.04e-29 | 110 |
| MS.gene37074.t1 | AT5G06770 | 51.741 | 201 | 81 | 7 | 100 | 290 | 18 | 212 | 6.42e-55 | 177 |
| MS.gene37074.t1 | AT5G06770 | 51.741 | 201 | 81 | 7 | 100 | 290 | 18 | 212 | 6.42e-55 | 177 |
| MS.gene37074.t1 | AT5G06770 | 51.741 | 201 | 81 | 7 | 100 | 290 | 18 | 212 | 6.42e-55 | 177 |
| MS.gene37074.t1 | AT3G12130 | 63.924 | 158 | 49 | 4 | 139 | 290 | 20 | 175 | 2.17e-53 | 172 |
| MS.gene37074.t1 | AT5G06770 | 59.333 | 150 | 56 | 4 | 141 | 290 | 23 | 167 | 3.66e-51 | 166 |
Find 97 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTCAATGTTTCTAAGATT+TGG | 0.218015 | 1.4:+39718891 | None:intergenic |
| TCTGCTGAAGGCTGCAAATT+TGG | 0.233846 | 1.4:-39719197 | MS.gene37074:CDS |
| TTGGTCTTGATGTTTCTTCC+AGG | 0.287578 | 1.4:+39718744 | None:intergenic |
| ATGTTTCTTCCAGGTGCGGC+TGG | 0.289209 | 1.4:+39718753 | None:intergenic |
| CCCATTCACCATGGGCAAAA+TGG | 0.307326 | 1.4:+39719165 | None:intergenic |
| GTTCAATGTTTCTAAGATTT+GGG | 0.309393 | 1.4:+39718892 | None:intergenic |
| GATCAGTGTAGAAGCTTCTT+TGG | 0.311263 | 1.4:-39719006 | MS.gene37074:CDS |
| GGAGCACCCAGGGTGGATTT+AGG | 0.312131 | 1.4:+39718789 | None:intergenic |
| TAAGATTTGGGTCAGATTCA+TGG | 0.329032 | 1.4:+39718904 | None:intergenic |
| CAGGTTTAAGATTCATCATC+TGG | 0.330164 | 1.4:+39719306 | None:intergenic |
| ACTGATCTTGGCAGTGGAAT+TGG | 0.339065 | 1.4:+39719022 | None:intergenic |
| GCTAAAGGATCCTGCACATT+TGG | 0.348312 | 1.4:-39718705 | MS.gene37074:CDS |
| CCCTCGTTTGCGGGCATCCA+TGG | 0.349169 | 1.4:+39722265 | None:intergenic |
| CACTTCTCACATCATGTTCC+CGG | 0.349238 | 1.4:-39719347 | MS.gene37074:CDS |
| ATCAACCCTCCCTCGTTTGC+GGG | 0.354317 | 1.4:+39722256 | None:intergenic |
| GGTCGAGTTGAGGCTCCTTC+TGG | 0.361759 | 1.4:-39719068 | MS.gene37074:CDS |
| TTGAAAATTTGACTCCTGTT+TGG | 0.371380 | 1.4:+39718934 | None:intergenic |
| AGGGTTGATGCTGCTGTTAA+TGG | 0.373294 | 1.4:-39722242 | MS.gene37074:CDS |
| TCTTTGGCTGGAGCTATCAT+TGG | 0.389153 | 1.4:-39718990 | MS.gene37074:CDS |
| GTTGAGGCTCCTTCTGGTCT+AGG | 0.393390 | 1.4:-39719062 | MS.gene37074:CDS |
| TCCACCCTGGGTGCTCCTGC+TGG | 0.401990 | 1.4:-39718783 | MS.gene37074:CDS |
| AGCATTGCTGGCTGTCCATT+TGG | 0.402746 | 1.4:-39719380 | MS.gene37074:CDS |
| GGTGGGGCGGCAACATTTCT+AGG | 0.421558 | 1.4:+39719275 | None:intergenic |
| GGTCTAGGCGGTACTAGCTT+TGG | 0.431440 | 1.4:-39719047 | MS.gene37074:CDS |
| AGAAGCTTCTACACTGATCT+TGG | 0.443492 | 1.4:+39719010 | None:intergenic |
| AGCAAAATTCTCACACAGCT+TGG | 0.448378 | 1.4:+39718725 | None:intergenic |
| GCCGCTGAATTGCGAAAGAT+AGG | 0.451271 | 1.4:-39718657 | MS.gene37074:CDS |
| GGTGGTGGCCCAGCCGCACC+TGG | 0.454343 | 1.4:-39718762 | MS.gene37074:CDS |
| CTGGGTGCTCCTGCTGGTGG+TGG | 0.456820 | 1.4:-39718777 | MS.gene37074:CDS |
| GCAACAGAAATGGACTCAAC+TGG | 0.458170 | 1.4:-39721250 | MS.gene37074:intron |
| CATCAACCCTCCCTCGTTTG+CGG | 0.460993 | 1.4:+39722255 | None:intergenic |
| CTTAGAAACATTGAACTTGA+GGG | 0.465557 | 1.4:-39718885 | MS.gene37074:CDS |
| GGCATACGACCAACATTTGT+AGG | 0.466912 | 1.4:+39719092 | None:intergenic |
| ACAAATGTTGGTCGTATGCC+TGG | 0.469504 | 1.4:-39719089 | MS.gene37074:CDS |
| GCGGCTGGGCCACCACCAGC+AGG | 0.473223 | 1.4:+39718768 | None:intergenic |
| TTCGCAATTCAGCGGCTCCA+TGG | 0.475467 | 1.4:+39718664 | None:intergenic |
| AGTGTAGAAGCTTCTTTGGC+TGG | 0.476113 | 1.4:-39719002 | MS.gene37074:CDS |
| CCAACATTTGTAGGTGCCAT+TGG | 0.476227 | 1.4:+39719101 | None:intergenic |
| AAGCAGATATGTCGCCAAAC+AGG | 0.477279 | 1.4:-39718948 | MS.gene37074:CDS |
| TGTTTCTTCCAGGTGCGGCT+GGG | 0.483249 | 1.4:+39718754 | None:intergenic |
| TGCCCCACCTAAATCCACCC+TGG | 0.484995 | 1.4:-39718796 | MS.gene37074:CDS |
| TCATCAACTGATGGAGCAAA+AGG | 0.487156 | 1.4:+39719131 | None:intergenic |
| AAGTGACAACCCTCACCAAA+TGG | 0.487932 | 1.4:+39719365 | None:intergenic |
| TCGCAATTCAGCGGCTCCAT+GGG | 0.491844 | 1.4:+39718665 | None:intergenic |
| GCCCCACCTAAATCCACCCT+GGG | 0.494162 | 1.4:-39718795 | MS.gene37074:CDS |
| TGCTGGCTGTCCATTTGGTG+AGG | 0.513418 | 1.4:-39719375 | MS.gene37074:CDS |
| GGCTGGAGCTATCATTGGAA+AGG | 0.517932 | 1.4:-39718985 | MS.gene37074:CDS |
| CCATTGTTAGAGACTGGTGG+TGG | 0.518004 | 1.4:+39719257 | None:intergenic |
| ACATTTCTAGGAGGTGCAGC+AGG | 0.522238 | 1.4:+39719287 | None:intergenic |
| GCTGGCTGTCCATTTGGTGA+GGG | 0.526668 | 1.4:-39719374 | MS.gene37074:CDS |
| TCTTAGAAACATTGAACTTG+AGG | 0.528176 | 1.4:-39718886 | MS.gene37074:CDS |
| ACATCTTTCTCCAAATGTGC+AGG | 0.531941 | 1.4:+39718695 | None:intergenic |
| ACCCTGGGTGCTCCTGCTGG+TGG | 0.535033 | 1.4:-39718780 | MS.gene37074:CDS |
| GCTGGAGCTATCATTGGAAA+GGG | 0.536163 | 1.4:-39718984 | MS.gene37074:CDS |
| CACCCAGGGTGGATTTAGGT+GGG | 0.536478 | 1.4:+39718793 | None:intergenic |
| ACCGAGTTCCCATTCACCAT+GGG | 0.537718 | 1.4:+39719157 | None:intergenic |
| GGCAACGGCATTATAACCAC+CGG | 0.537881 | 1.4:+39719328 | None:intergenic |
| ACCACCAGCAGGAGCACCCA+GGG | 0.538705 | 1.4:+39718779 | None:intergenic |
| GCACCCAGGGTGGATTTAGG+TGG | 0.545220 | 1.4:+39718792 | None:intergenic |
| GCCCATGGTGAATGGGAACT+CGG | 0.546163 | 1.4:-39719158 | MS.gene37074:CDS |
| AACAAGTTTAATTCTGCTGA+AGG | 0.547801 | 1.4:-39719209 | MS.gene37074:CDS |
| TCCTATCTTTCGCAATTCAG+CGG | 0.550243 | 1.4:+39718656 | None:intergenic |
| GCAGAACCATTGTTAGAGAC+TGG | 0.559543 | 1.4:+39719251 | None:intergenic |
| CTAGTACCGCCTAGACCAGA+AGG | 0.560068 | 1.4:+39719053 | None:intergenic |
| TGGATGCCCGCAAACGAGGG+AGG | 0.563890 | 1.4:-39722262 | MS.gene37074:CDS |
| AAGATTCATCATCTGGGCAA+CGG | 0.568550 | 1.4:+39719313 | None:intergenic |
| GGACGGTGATCATCAACTGA+TGG | 0.568940 | 1.4:+39719122 | None:intergenic |
| CCAATGGCACCTACAAATGT+TGG | 0.569357 | 1.4:-39719101 | MS.gene37074:CDS |
| TTCTACACTGATCTTGGCAG+TGG | 0.569888 | 1.4:+39719016 | None:intergenic |
| ACCATGGATGCCCGCAAACG+AGG | 0.575371 | 1.4:-39722266 | MS.gene37074:CDS |
| CATTTGTAGGTGCCATTGGA+CGG | 0.575412 | 1.4:+39719105 | None:intergenic |
| GGATGCCCGCAAACGAGGGA+GGG | 0.582958 | 1.4:-39722261 | MS.gene37074:CDS |
| CACCACCAGCAGGAGCACCC+AGG | 0.583302 | 1.4:+39718778 | None:intergenic |
| CCATGGATGCCCGCAAACGA+GGG | 0.583791 | 1.4:-39722265 | MS.gene37074:CDS |
| GAAAGATGTCACTTTGCCCA+TGG | 0.584192 | 1.4:-39718681 | MS.gene37074:CDS |
| CTTGATGTTTCTTCCAGGTG+CGG | 0.585145 | 1.4:+39718749 | None:intergenic |
| GAAATGGACTCAACTGGTGT+AGG | 0.590424 | 1.4:-39721244 | MS.gene37074:CDS |
| AGGTTTAAGATTCATCATCT+GGG | 0.591191 | 1.4:+39719307 | None:intergenic |
| AATTAAACTTGTTACATATG+CGG | 0.591258 | 1.4:+39719219 | None:intergenic |
| CCACCACCAGTCTCTAACAA+TGG | 0.591961 | 1.4:-39719257 | MS.gene37074:CDS |
| TACCGAGTTCCCATTCACCA+TGG | 0.592664 | 1.4:+39719156 | None:intergenic |
| AGTTGATGATCACCGTCCAA+TGG | 0.605823 | 1.4:-39719117 | MS.gene37074:CDS |
| ATTGTTAGAGACTGGTGGTG+GGG | 0.606388 | 1.4:+39719259 | None:intergenic |
| GAAGGAGCCTCAACTCGACC+AGG | 0.607588 | 1.4:+39719071 | None:intergenic |
| TCGTATGCCTGGTCGAGTTG+AGG | 0.614018 | 1.4:-39719078 | MS.gene37074:CDS |
| GGAGCTATCATTGGAAAGGG+TGG | 0.621933 | 1.4:-39718981 | MS.gene37074:CDS |
| GTTAGAGACTGGTGGTGGGG+CGG | 0.623695 | 1.4:+39719262 | None:intergenic |
| CATTGTTAGAGACTGGTGGT+GGG | 0.635968 | 1.4:+39719258 | None:intergenic |
| ACCCAGGGTGGATTTAGGTG+GGG | 0.640360 | 1.4:+39718794 | None:intergenic |
| AATTGCACAAGCAAGTAACA+TGG | 0.648235 | 1.4:-39718850 | MS.gene37074:CDS |
| TCCGTCAAGAAAACCAAACA+AGG | 0.648477 | 1.4:-39722218 | MS.gene37074:intron |
| GCAACGGCATTATAACCACC+GGG | 0.654418 | 1.4:+39719329 | None:intergenic |
| TTCTCACATCATGTTCCCGG+TGG | 0.667160 | 1.4:-39719344 | MS.gene37074:CDS |
| GGGGCGGCAACATTTCTAGG+AGG | 0.676956 | 1.4:+39719278 | None:intergenic |
| ACCAGCAGGAGCACCCAGGG+TGG | 0.680551 | 1.4:+39718782 | None:intergenic |
| GAACCATTGTTAGAGACTGG+TGG | 0.695821 | 1.4:+39719254 | None:intergenic |
| GAGGCTCCTTCTGGTCTAGG+CGG | 0.707296 | 1.4:-39719059 | MS.gene37074:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATTACAAATTTATTTATA+TGG | + | chr1.4:39718934-39718953 | None:intergenic | 10.0% |
| !! | TTAAAAATATTTGTTTAGAT+AGG | + | chr1.4:39719741-39719760 | None:intergenic | 10.0% |
| !!! | CTTTTAAGTAATAATATTTT+TGG | + | chr1.4:39719562-39719581 | None:intergenic | 10.0% |
| !!! | TATTTTTTAAATTTAGTTGT+TGG | - | chr1.4:39718855-39718874 | MS.gene37074:CDS | 10.0% |
| !! | AATAAATAAAAAGTTTGAAG+AGG | + | chr1.4:39718732-39718751 | None:intergenic | 15.0% |
| !! | CTATTTACAAGATAATAAAA+TGG | - | chr1.4:39720083-39720102 | MS.gene37074:intron | 15.0% |
| !!! | AAAAGAAAGAATAAGATTTT+TGG | - | chr1.4:39719577-39719596 | MS.gene37074:intron | 15.0% |
| !!! | AGATTTTAAAAATTACAATC+TGG | + | chr1.4:39720307-39720326 | None:intergenic | 15.0% |
| !!! | TTAAGTTTCTTTTAGATAAA+GGG | + | chr1.4:39719395-39719414 | None:intergenic | 15.0% |
| !!! | TTTAAGTTTCTTTTAGATAA+AGG | + | chr1.4:39719396-39719415 | None:intergenic | 15.0% |
| !!! | TTTTCATAACAATAATACTT+TGG | - | chr1.4:39721462-39721481 | MS.gene37074:intron | 15.0% |
| !! | ACAGAATAATGGTTTATTAA+TGG | - | chr1.4:39719875-39719894 | MS.gene37074:intron | 20.0% |
| !! | ATATTATAGGCAATGATATA+TGG | - | chr1.4:39720994-39721013 | MS.gene37074:intron | 20.0% |
| !! | ATCAAATTGTAACAGAATAA+TGG | - | chr1.4:39719864-39719883 | MS.gene37074:intron | 20.0% |
| !! | GTTTAGTCAATTAAGAAATA+CGG | - | chr1.4:39720488-39720507 | MS.gene37074:intron | 20.0% |
| !! | TTACAAGATAATAAAATGGT+TGG | - | chr1.4:39720087-39720106 | MS.gene37074:intron | 20.0% |
| !! | TTTAATTGATGTAACATAAC+AGG | + | chr1.4:39720852-39720871 | None:intergenic | 20.0% |
| !!! | AATTAAACTTGTTACATATG+CGG | + | chr1.4:39721697-39721716 | None:intergenic | 20.0% |
| !!! | CAATTACGGTTTATAATTTT+GGG | + | chr1.4:39719419-39719438 | None:intergenic | 20.0% |
| !!! | TTAAACAGTTTTTTAAGTTC+AGG | + | chr1.4:39719219-39719238 | None:intergenic | 20.0% |
| !!! | TTATTTTGATAGTAGTTAAC+AGG | - | chr1.4:39721413-39721432 | MS.gene37074:intron | 20.0% |
| ! | AACAAAATTTACAGTCGTAA+AGG | + | chr1.4:39720404-39720423 | None:intergenic | 25.0% |
| ! | AACTACTTAGTTGAAGTAAT+AGG | + | chr1.4:39720212-39720231 | None:intergenic | 25.0% |
| ! | ACATTCCTATATTCTTCTTA+AGG | - | chr1.4:39721367-39721386 | MS.gene37074:intron | 25.0% |
| ! | ACTACTTAGTTGAAGTAATA+GGG | + | chr1.4:39720211-39720230 | None:intergenic | 25.0% |
| ! | AGCAAGATTTACAGTAATTA+AGG | + | chr1.4:39719993-39720012 | None:intergenic | 25.0% |
| ! | ATATCAATGGCTATAACAAT+TGG | + | chr1.4:39721116-39721135 | None:intergenic | 25.0% |
| ! | ATGTTAGTATTAAAGAGAGT+TGG | + | chr1.4:39720793-39720812 | None:intergenic | 25.0% |
| ! | ATTAAGAAATACGGAATTCT+TGG | - | chr1.4:39720497-39720516 | MS.gene37074:intron | 25.0% |
| ! | GCTGATAAGTCATTATTAAA+TGG | + | chr1.4:39720018-39720037 | None:intergenic | 25.0% |
| ! | GGAAAAAGATAATAAATTGC+AGG | - | chr1.4:39719902-39719921 | MS.gene37074:intron | 25.0% |
| ! | TAATGGTTTATTAATGGAGT+TGG | - | chr1.4:39719881-39719900 | MS.gene37074:intron | 25.0% |
| ! | TAGTTAACAGGAAATGAAAA+GGG | - | chr1.4:39721425-39721444 | MS.gene37074:intron | 25.0% |
| !! | ATATCAACTAAAGAAGCATA+TGG | + | chr1.4:39719022-39719041 | None:intergenic | 25.0% |
| !! | ATGTGTAATTTTCAACTGTT+GGG | - | chr1.4:39721227-39721246 | MS.gene37074:CDS | 25.0% |
| !! | GAATGTTATTTGTTAGCTTA+TGG | + | chr1.4:39721143-39721162 | None:intergenic | 25.0% |
| !! | GCAATTACGGTTTATAATTT+TGG | + | chr1.4:39719420-39719439 | None:intergenic | 25.0% |
| !! | TTAATGTTTTGCAACAGAAA+TGG | - | chr1.4:39719653-39719672 | MS.gene37074:intron | 25.0% |
| !! | TTACGACTGTAAATTTTGTT+TGG | - | chr1.4:39720404-39720423 | MS.gene37074:intron | 25.0% |
| !! | TTCTTTTAGATAAAGGGAAT+CGG | + | chr1.4:39719389-39719408 | None:intergenic | 25.0% |
| !!! | AGTTCAATGTTTCTAAGATT+TGG | + | chr1.4:39722025-39722044 | None:intergenic | 25.0% |
| !!! | GTTCAATGTTTCTAAGATTT+GGG | + | chr1.4:39722024-39722043 | None:intergenic | 25.0% |
| !!! | TACGACTGTAAATTTTGTTT+GGG | - | chr1.4:39720405-39720424 | MS.gene37074:intron | 25.0% |
| !!! | TTCTTTCCTTTAGTTTTTCT+TGG | - | chr1.4:39720667-39720686 | MS.gene37074:intron | 25.0% |
| AACAAGTTTAATTCTGCTGA+AGG | - | chr1.4:39721704-39721723 | MS.gene37074:intron | 30.0% | |
| AGATTAGAACCTGAAAAACT+TGG | + | chr1.4:39719715-39719734 | None:intergenic | 30.0% | |
| AGTTAACAGGAAATGAAAAG+GGG | - | chr1.4:39721426-39721445 | MS.gene37074:intron | 30.0% | |
| ATCTAATTCTGCATCTTAAC+TGG | - | chr1.4:39719799-39719818 | MS.gene37074:intron | 30.0% | |
| CAACAGTTGAAAATTACACA+TGG | + | chr1.4:39721228-39721247 | None:intergenic | 30.0% | |
| CATCTCTTGTAGCATATTAT+AGG | - | chr1.4:39720981-39721000 | MS.gene37074:intron | 30.0% | |
| CTACTTAGTTGAAGTAATAG+GGG | + | chr1.4:39720210-39720229 | None:intergenic | 30.0% | |
| CTTAGAAACATTGAACTTGA+GGG | - | chr1.4:39722028-39722047 | MS.gene37074:intron | 30.0% | |
| CTTGTAAATAGCTTACCAAT+TGG | + | chr1.4:39720074-39720093 | None:intergenic | 30.0% | |
| GAAAAACTAAAGGAAAGAAC+AGG | + | chr1.4:39720666-39720685 | None:intergenic | 30.0% | |
| GATAATAAAATGGTTGGATC+AGG | - | chr1.4:39720093-39720112 | MS.gene37074:intron | 30.0% | |
| GTAGTTAACAGGAAATGAAA+AGG | - | chr1.4:39721424-39721443 | MS.gene37074:intron | 30.0% | |
| GTGTCTAAAAGATAACTTCA+TGG | - | chr1.4:39720139-39720158 | MS.gene37074:intron | 30.0% | |
| TAAATAGCTTACCAATTGGA+AGG | + | chr1.4:39720070-39720089 | None:intergenic | 30.0% | |
| TACTTAGTTGAAGTAATAGG+GGG | + | chr1.4:39720209-39720228 | None:intergenic | 30.0% | |
| TCAGTGTAATTACAAGTGTT+GGG | - | chr1.4:39719101-39719120 | MS.gene37074:CDS | 30.0% | |
| TCTAATTCTGCATCTTAACT+GGG | - | chr1.4:39719800-39719819 | MS.gene37074:intron | 30.0% | |
| TCTGTGTTCTTGAATTTGAA+AGG | - | chr1.4:39718757-39718776 | MS.gene37074:CDS | 30.0% | |
| TCTTAGAAACATTGAACTTG+AGG | - | chr1.4:39722027-39722046 | MS.gene37074:intron | 30.0% | |
| TGCAAAACAAGAAAACATCA+TGG | + | chr1.4:39721514-39721533 | None:intergenic | 30.0% | |
| TTATAACCAGTCAGATAATG+CGG | + | chr1.4:39721185-39721204 | None:intergenic | 30.0% | |
| TTCAGTGTAATTACAAGTGT+TGG | - | chr1.4:39719100-39719119 | MS.gene37074:CDS | 30.0% | |
| TTCATCAACTAAAATCCCAT+TGG | - | chr1.4:39720937-39720956 | MS.gene37074:intron | 30.0% | |
| TTCCACCTTAAGAAGAATAT+AGG | + | chr1.4:39721375-39721394 | None:intergenic | 30.0% | |
| TTCCTATATTCTTCTTAAGG+TGG | - | chr1.4:39721370-39721389 | MS.gene37074:intron | 30.0% | |
| TTGAAAATTTGACTCCTGTT+TGG | + | chr1.4:39721982-39722001 | None:intergenic | 30.0% | |
| TTGGTAGAAGGTTCAATATT+AGG | - | chr1.4:39720516-39720535 | MS.gene37074:intron | 30.0% | |
| TTGTTATAGCCATTGATATG+TGG | - | chr1.4:39721117-39721136 | MS.gene37074:intron | 30.0% | |
| TTGTTGGATTCATGTTTGTT+TGG | - | chr1.4:39718871-39718890 | MS.gene37074:CDS | 30.0% | |
| ! | AGCTTTTGGTAAAACATTAG+AGG | - | chr1.4:39720238-39720257 | MS.gene37074:intron | 30.0% |
| ! | AGGTTTAAGATTCATCATCT+GGG | + | chr1.4:39721609-39721628 | None:intergenic | 30.0% |
| ! | CATGTGTAATTTTCAACTGT+TGG | - | chr1.4:39721226-39721245 | MS.gene37074:CDS | 30.0% |
| ! | TCAACCATCTTTTCTTCAAT+AGG | - | chr1.4:39720760-39720779 | MS.gene37074:intron | 30.0% |
| ! | TCTTTAGTTGATATGAAGCA+CGG | - | chr1.4:39719028-39719047 | MS.gene37074:CDS | 30.0% |
| ! | TTTAGGATGATTGCTTCAAT+TGG | - | chr1.4:39719471-39719490 | MS.gene37074:intron | 30.0% |
| !! | AAAAACCTCGTTTTAAACAC+CGG | - | chr1.4:39719348-39719367 | MS.gene37074:CDS | 30.0% |
| !! | AAGTAGTTCTATCAAGCTTT+TGG | - | chr1.4:39720224-39720243 | MS.gene37074:intron | 30.0% |
| !! | GTGTTTTGTTCACATAAATC+TGG | - | chr1.4:39720557-39720576 | MS.gene37074:intron | 30.0% |
| !!! | AACAATTGGTTTTCTTTCAG+AGG | + | chr1.4:39721102-39721121 | None:intergenic | 30.0% |
| !!! | ACAATTGGTTTTCTTTCAGA+GGG | + | chr1.4:39721101-39721120 | None:intergenic | 30.0% |
| AAATTACAATCTGGTGAGAG+CGG | + | chr1.4:39720298-39720317 | None:intergenic | 35.0% | |
| AACACAGAACAAGCAATCAA+AGG | + | chr1.4:39720436-39720455 | None:intergenic | 35.0% | |
| AACCATATCATATCCACCAA+AGG | + | chr1.4:39721063-39721082 | None:intergenic | 35.0% | |
| AACCTGAAAAACTTGGTACA+AGG | + | chr1.4:39719708-39719727 | None:intergenic | 35.0% | |
| AATACGGAATTCTTGGTAGA+AGG | - | chr1.4:39720504-39720523 | MS.gene37074:intron | 35.0% | |
| AATTGCACAAGCAAGTAACA+TGG | - | chr1.4:39722063-39722082 | MS.gene37074:intron | 35.0% | |
| ACTATATCAACCTTCAACTC+AGG | + | chr1.4:39719525-39719544 | None:intergenic | 35.0% | |
| AGATGAGAAAAACCAATGGT+AGG | + | chr1.4:39720966-39720985 | None:intergenic | 35.0% | |
| AGCACCTATTGAAGAAAAGA+TGG | + | chr1.4:39720767-39720786 | None:intergenic | 35.0% | |
| ATAAATTGCAGGAAGATCCA+TGG | - | chr1.4:39719913-39719932 | MS.gene37074:intron | 35.0% | |
| ATAGGCAATGATATATGGTG+TGG | - | chr1.4:39720999-39721018 | MS.gene37074:intron | 35.0% | |
| ATGGAAGCAATGATCTATGT+TGG | + | chr1.4:39721209-39721228 | None:intergenic | 35.0% | |
| CAAGAGATGAGAAAAACCAA+TGG | + | chr1.4:39720970-39720989 | None:intergenic | 35.0% | |
| CTATATCAACCTTCAACTCA+GGG | + | chr1.4:39719524-39719543 | None:intergenic | 35.0% | |
| GAACAACTAAAACACTGCAA+TGG | + | chr1.4:39720603-39720622 | None:intergenic | 35.0% | |
| GGAAGACCAAGAAAAACTAA+AGG | + | chr1.4:39720676-39720695 | None:intergenic | 35.0% | |
| GGTGAAAAAGAAACCTTGTT+TGG | + | chr1.4:39718711-39718730 | None:intergenic | 35.0% | |
| GTAGTGTGTTATCTAACCTT+TGG | - | chr1.4:39721044-39721063 | MS.gene37074:intron | 35.0% | |
| TAAGATTTGGGTCAGATTCA+TGG | + | chr1.4:39722012-39722031 | None:intergenic | 35.0% | |
| TCGGTTGTAATTGATGTATC+CGG | + | chr1.4:39719370-39719389 | None:intergenic | 35.0% | |
| TGAATTTCACATGACAAGCA+TGG | + | chr1.4:39718999-39719018 | None:intergenic | 35.0% | |
| TTAGACACAGACGCATAATT+TGG | + | chr1.4:39720127-39720146 | None:intergenic | 35.0% | |
| ! | AACCTTTGGTGGATATGATA+TGG | - | chr1.4:39721058-39721077 | MS.gene37074:intron | 35.0% |
| ! | AATCTAGACTTAGCTGGTTT+GGG | + | chr1.4:39720741-39720760 | None:intergenic | 35.0% |
| ! | CAGGTTTAAGATTCATCATC+TGG | + | chr1.4:39721610-39721629 | None:intergenic | 35.0% |
| ! | CAGTGTAATTACAAGTGTTG+GGG | - | chr1.4:39719102-39719121 | MS.gene37074:CDS | 35.0% |
| ! | CTGTGTGAGAATTTTGCTAA+AGG | - | chr1.4:39722193-39722212 | MS.gene37074:intron | 35.0% |
| ! | GGGTATTCTAAGCTTTATAC+AGG | - | chr1.4:39719820-39719839 | MS.gene37074:intron | 35.0% |
| !! | TCAGAGAGTGTTCAAAGTTT+AGG | - | chr1.4:39719454-39719473 | MS.gene37074:intron | 35.0% |
| !!! | ACCTTGTTTGGTTTTCTTGA+CGG | + | chr1.4:39718699-39718718 | None:intergenic | 35.0% |
| AACCAATGGTAGGTTTCCAA+TGG | + | chr1.4:39720956-39720975 | None:intergenic | 40.0% | |
| AAGATTCATCATCTGGGCAA+CGG | + | chr1.4:39721603-39721622 | None:intergenic | 40.0% | |
| ACATCTTTCTCCAAATGTGC+AGG | + | chr1.4:39722221-39722240 | None:intergenic | 40.0% | |
| ACCAATGGTAGGTTTCCAAT+GGG | + | chr1.4:39720955-39720974 | None:intergenic | 40.0% | |
| AGAAGCTTCTACACTGATCT+TGG | + | chr1.4:39721906-39721925 | None:intergenic | 40.0% | |
| AGACTTCTGCATCATGTACA+AGG | - | chr1.4:39720871-39720890 | MS.gene37074:intron | 40.0% | |
| AGCAAAATTCTCACACAGCT+TGG | + | chr1.4:39722191-39722210 | None:intergenic | 40.0% | |
| AGCTTATGGCCACATATCAA+TGG | + | chr1.4:39721129-39721148 | None:intergenic | 40.0% | |
| ATAGCTTACCAATTGGAAGG+TGG | + | chr1.4:39720067-39720086 | None:intergenic | 40.0% | |
| ATTTAGTGTTCCCATTGCCA+TGG | + | chr1.4:39719933-39719952 | None:intergenic | 40.0% | |
| CGGATCAGAACAATGACTAT+CGG | + | chr1.4:39721165-39721184 | None:intergenic | 40.0% | |
| GAATCTAGACTTAGCTGGTT+TGG | + | chr1.4:39720742-39720761 | None:intergenic | 40.0% | |
| GACTTCTGCATCATGTACAA+GGG | - | chr1.4:39720872-39720891 | MS.gene37074:intron | 40.0% | |
| GATCAGTGTAGAAGCTTCTT+TGG | - | chr1.4:39721907-39721926 | MS.gene37074:intron | 40.0% | |
| GATGAAACCAGATCAACTCA+TGG | + | chr1.4:39720923-39720942 | None:intergenic | 40.0% | |
| GCACAACTCTGTTGCAATTA+CGG | + | chr1.4:39719433-39719452 | None:intergenic | 40.0% | |
| GTGTGTTATCTAACCTTTGG+TGG | - | chr1.4:39721047-39721066 | MS.gene37074:intron | 40.0% | |
| TAGCTTACCAATTGGAAGGT+GGG | + | chr1.4:39720066-39720085 | None:intergenic | 40.0% | |
| TCATCAACTGATGGAGCAAA+AGG | + | chr1.4:39721785-39721804 | None:intergenic | 40.0% | |
| TCCGTCAAGAAAACCAAACA+AGG | - | chr1.4:39718695-39718714 | MS.gene37074:CDS | 40.0% | |
| TCCTATCTTTCGCAATTCAG+CGG | + | chr1.4:39722260-39722279 | None:intergenic | 40.0% | |
| TGCTTGTTCTGTGTTTACGT+AGG | - | chr1.4:39720441-39720460 | MS.gene37074:intron | 40.0% | |
| TGGTTGAATCTAGACTTAGC+TGG | + | chr1.4:39720747-39720766 | None:intergenic | 40.0% | |
| TTCGACAACAGAGTTTCAGA+GGG | + | chr1.4:39719248-39719267 | None:intergenic | 40.0% | |
| TTGCTTCAACCTATGAAGCA+CGG | + | chr1.4:39719166-39719185 | None:intergenic | 40.0% | |
| ! | ATTGCTTCAATTGGAAGCAC+AGG | - | chr1.4:39719480-39719499 | MS.gene37074:intron | 40.0% |
| ! | ATTTTCAACTGTTGGGCACT+TGG | - | chr1.4:39721234-39721253 | MS.gene37074:CDS | 40.0% |
| ! | TGTATCCGGTGTTTAAAACG+AGG | + | chr1.4:39719356-39719375 | None:intergenic | 40.0% |
| ! | TTTTCAACTGTTGGGCACTT+GGG | - | chr1.4:39721235-39721254 | MS.gene37074:CDS | 40.0% |
| !! | AGCCTTGTACCAAGTTTTTC+AGG | - | chr1.4:39719703-39719722 | MS.gene37074:intron | 40.0% |
| !! | TCACTGGAATTTGCTATCGA+TGG | - | chr1.4:39719272-39719291 | MS.gene37074:CDS | 40.0% |
| !! | TTGGTCTTGATGTTTCTTCC+AGG | + | chr1.4:39722172-39722191 | None:intergenic | 40.0% |
| !! | TTGGTTTTCTTTCAGAGGGA+GGG | + | chr1.4:39721097-39721116 | None:intergenic | 40.0% |
| !!! | ATTGGTTTTCTTTCAGAGGG+AGG | + | chr1.4:39721098-39721117 | None:intergenic | 40.0% |
| !!! | TTCTTGTTTTGCAGCATTGC+TGG | - | chr1.4:39721521-39721540 | MS.gene37074:intron | 40.0% |
| AAGCAGATATGTCGCCAAAC+AGG | - | chr1.4:39721965-39721984 | MS.gene37074:intron | 45.0% | |
| AAGTGACAACCCTCACCAAA+TGG | + | chr1.4:39721551-39721570 | None:intergenic | 45.0% | |
| ACAAATGTTGGTCGTATGCC+TGG | - | chr1.4:39721824-39721843 | MS.gene37074:intron | 45.0% | |
| ACTGATCTTGGCAGTGGAAT+TGG | + | chr1.4:39721894-39721913 | None:intergenic | 45.0% | |
| AGTGTAGAAGCTTCTTTGGC+TGG | - | chr1.4:39721911-39721930 | MS.gene37074:intron | 45.0% | |
| CACTTCTCACATCATGTTCC+CGG | - | chr1.4:39721566-39721585 | MS.gene37074:intron | 45.0% | |
| CAGGTGATTAGACTTGACTG+TGG | + | chr1.4:39720833-39720852 | None:intergenic | 45.0% | |
| CATTGTTAGAGACTGGTGGT+GGG | + | chr1.4:39721658-39721677 | None:intergenic | 45.0% | |
| CCAATGCTACAAAGCTGATC+AGG | + | chr1.4:39720363-39720382 | None:intergenic | 45.0% | |
| CCAATGGCACCTACAAATGT+TGG | - | chr1.4:39721812-39721831 | MS.gene37074:intron | 45.0% | |
| CTTCGACAACAGAGTTTCAG+AGG | + | chr1.4:39719249-39719268 | None:intergenic | 45.0% | |
| CTTGATGTTTCTTCCAGGTG+CGG | + | chr1.4:39722167-39722186 | None:intergenic | 45.0% | |
| GAACCATTGTTAGAGACTGG+TGG | + | chr1.4:39721662-39721681 | None:intergenic | 45.0% | |
| GCAGAACCATTGTTAGAGAC+TGG | + | chr1.4:39721665-39721684 | None:intergenic | 45.0% | |
| GCTAAAGGATCCTGCACATT+TGG | - | chr1.4:39722208-39722227 | MS.gene37074:intron | 45.0% | |
| GCTGGAGCTATCATTGGAAA+GGG | - | chr1.4:39721929-39721948 | MS.gene37074:intron | 45.0% | |
| GGCATACGACCAACATTTGT+AGG | + | chr1.4:39721824-39721843 | None:intergenic | 45.0% | |
| TCCCATTGGAAACCTACCAT+TGG | - | chr1.4:39720951-39720970 | MS.gene37074:intron | 45.0% | |
| TCTGATCCGCATTATCTGAC+TGG | - | chr1.4:39721176-39721195 | MS.gene37074:intron | 45.0% | |
| TCTGCTGAAGGCTGCAAATT+TGG | - | chr1.4:39721716-39721735 | MS.gene37074:intron | 45.0% | |
| TCTGTTGTCGAAGTAGTCAC+TGG | - | chr1.4:39719256-39719275 | MS.gene37074:CDS | 45.0% | |
| TCTTTGGCTGGAGCTATCAT+TGG | - | chr1.4:39721923-39721942 | MS.gene37074:intron | 45.0% | |
| TGATGAACCCACCTTCCAAT+TGG | - | chr1.4:39720056-39720075 | MS.gene37074:intron | 45.0% | |
| TTCTACACTGATCTTGGCAG+TGG | + | chr1.4:39721900-39721919 | None:intergenic | 45.0% | |
| ! | AGGAGAGTACAACAGTAGGA+GGG | + | chr1.4:39720709-39720728 | None:intergenic | 45.0% |
| ! | AGTGAGGAGAGTACAACAGT+AGG | + | chr1.4:39720713-39720732 | None:intergenic | 45.0% |
| ! | ATTGTTAGAGACTGGTGGTG+GGG | + | chr1.4:39721657-39721676 | None:intergenic | 45.0% |
| ! | CCAACATTTGTAGGTGCCAT+TGG | + | chr1.4:39721815-39721834 | None:intergenic | 45.0% |
| ! | CCATTTTGCCCATGGTGAAT+GGG | - | chr1.4:39721748-39721767 | MS.gene37074:intron | 45.0% |
| ! | CCTGATCAGCTTTGTAGCAT+TGG | - | chr1.4:39720360-39720379 | MS.gene37074:intron | 45.0% |
| ! | GAAATGGACTCAACTGGTGT+AGG | - | chr1.4:39719669-39719688 | MS.gene37074:intron | 45.0% |
| ! | GATGCAGTTGCGGATTAACT+TGG | - | chr1.4:39721298-39721317 | MS.gene37074:intron | 45.0% |
| ! | GCAACAGAAATGGACTCAAC+TGG | - | chr1.4:39719663-39719682 | MS.gene37074:intron | 45.0% |
| ! | TTCACATGACCCTGAGTTGA+AGG | - | chr1.4:39719512-39719531 | MS.gene37074:intron | 45.0% |
| !! | ACAGACACCATGAGTTGATC+TGG | - | chr1.4:39720913-39720932 | MS.gene37074:intron | 45.0% |
| !! | AGGGTTGATGCTGCTGTTAA+TGG | - | chr1.4:39718671-39718690 | MS.gene37074:CDS | 45.0% |
| !! | AGTTGATGATCACCGTCCAA+TGG | - | chr1.4:39721796-39721815 | MS.gene37074:intron | 45.0% |
| !! | CATTTGTAGGTGCCATTGGA+CGG | + | chr1.4:39721811-39721830 | None:intergenic | 45.0% |
| !! | GAAAGATGTCACTTTGCCCA+TGG | - | chr1.4:39722232-39722251 | MS.gene37074:CDS | 45.0% |
| AAAGAACAGGACCAGAGCAG+TGG | + | chr1.4:39720653-39720672 | None:intergenic | 50.0% | |
| ACCGAGTTCCCATTCACCAT+GGG | + | chr1.4:39721759-39721778 | None:intergenic | 50.0% | |
| ATTAGCAGTATCGCAGCGTC+AGG | + | chr1.4:39719062-39719081 | None:intergenic | 50.0% | |
| CCACCACCAGTCTCTAACAA+TGG | - | chr1.4:39721656-39721675 | MS.gene37074:intron | 50.0% | |
| CCATTGTTAGAGACTGGTGG+TGG | + | chr1.4:39721659-39721678 | None:intergenic | 50.0% | |
| CCCATTCACCATGGGCAAAA+TGG | + | chr1.4:39721751-39721770 | None:intergenic | 50.0% | |
| GCAACGGCATTATAACCACC+GGG | + | chr1.4:39721587-39721606 | None:intergenic | 50.0% | |
| GCAGGAAGATCCATGGCAAT+GGG | - | chr1.4:39719920-39719939 | MS.gene37074:intron | 50.0% | |
| GCCGCTGAATTGCGAAAGAT+AGG | - | chr1.4:39722256-39722275 | MS.gene37074:CDS | 50.0% | |
| GCTTTGCTCTGATGCAGTTG+CGG | - | chr1.4:39721288-39721307 | MS.gene37074:intron | 50.0% | |
| GGACGGTGATCATCAACTGA+TGG | + | chr1.4:39721794-39721813 | None:intergenic | 50.0% | |
| GGAGCTATCATTGGAAAGGG+TGG | - | chr1.4:39721932-39721951 | MS.gene37074:intron | 50.0% | |
| GGCAACGGCATTATAACCAC+CGG | + | chr1.4:39721588-39721607 | None:intergenic | 50.0% | |
| GGCTGGAGCTATCATTGGAA+AGG | - | chr1.4:39721928-39721947 | MS.gene37074:intron | 50.0% | |
| GTACAACAGTAGGAGGGAAG+AGG | + | chr1.4:39720703-39720722 | None:intergenic | 50.0% | |
| TACCGAGTTCCCATTCACCA+TGG | + | chr1.4:39721760-39721779 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | + | chr1.4:39719155-39719174 | None:intergenic | 50.0% | |
| TGCAGGAAGATCCATGGCAA+TGG | - | chr1.4:39719919-39719938 | MS.gene37074:intron | 50.0% | |
| TTAGCAGTATCGCAGCGTCA+GGG | + | chr1.4:39719061-39719080 | None:intergenic | 50.0% | |
| TTCTCACATCATGTTCCCGG+TGG | - | chr1.4:39721569-39721588 | MS.gene37074:intron | 50.0% | |
| ! | ACATTTCTAGGAGGTGCAGC+AGG | + | chr1.4:39721629-39721648 | None:intergenic | 50.0% |
| ! | AGCATTGCTGGCTGTCCATT+TGG | - | chr1.4:39721533-39721552 | MS.gene37074:intron | 50.0% |
| ! | GAGGAGAGTACAACAGTAGG+AGG | + | chr1.4:39720710-39720729 | None:intergenic | 50.0% |
| ! | GCTTCAATTGGAAGCACAGG+TGG | - | chr1.4:39719483-39719502 | MS.gene37074:intron | 50.0% |
| !! | AACCATCGCTCTGGAGCAAA+GGG | + | chr1.4:39720336-39720355 | None:intergenic | 50.0% |
| !! | ATCTGCTGTTTCCACTGCTC+TGG | - | chr1.4:39720639-39720658 | MS.gene37074:intron | 50.0% |
| !! | GCCATTTTGCCCATGGTGAA+TGG | - | chr1.4:39721747-39721766 | MS.gene37074:intron | 50.0% |
| !! | GCTGGTTTGGGCATATAGTG+AGG | + | chr1.4:39720729-39720748 | None:intergenic | 50.0% |
| !! | TACAAGTGTTGGGGTCGTGT+CGG | - | chr1.4:39719111-39719130 | MS.gene37074:CDS | 50.0% |
| !!! | GACAAGTGCCATTTTGCCCA+TGG | - | chr1.4:39721740-39721759 | MS.gene37074:intron | 50.0% |
| ATCAACCCTCCCTCGTTTGC+GGG | + | chr1.4:39718660-39718679 | None:intergenic | 55.0% | |
| ATGTTTCTTCCAGGTGCGGC+TGG | + | chr1.4:39722163-39722182 | None:intergenic | 55.0% | |
| CACGGACACTCCTCGGATTA+GGG | + | chr1.4:39719148-39719167 | None:intergenic | 55.0% | |
| CATCAACCCTCCCTCGTTTG+CGG | + | chr1.4:39718661-39718680 | None:intergenic | 55.0% | |
| CTAGTACCGCCTAGACCAGA+AGG | + | chr1.4:39721863-39721882 | None:intergenic | 55.0% | |
| GCCCATGGTGAATGGGAACT+CGG | - | chr1.4:39721755-39721774 | MS.gene37074:intron | 55.0% | |
| GTTGAGGCTCCTTCTGGTCT+AGG | - | chr1.4:39721851-39721870 | MS.gene37074:intron | 55.0% | |
| TACCTGGACACCCTAATCCG+AGG | - | chr1.4:39719135-39719154 | MS.gene37074:CDS | 55.0% | |
| TCGCAATTCAGCGGCTCCAT+GGG | + | chr1.4:39722251-39722270 | None:intergenic | 55.0% | |
| TGTTTCTTCCAGGTGCGGCT+GGG | + | chr1.4:39722162-39722181 | None:intergenic | 55.0% | |
| TTCGCAATTCAGCGGCTCCA+TGG | + | chr1.4:39722252-39722271 | None:intergenic | 55.0% | |
| ! | ACCCAGGGTGGATTTAGGTG+GGG | + | chr1.4:39722122-39722141 | None:intergenic | 55.0% |
| ! | CACCCAGGGTGGATTTAGGT+GGG | + | chr1.4:39722123-39722142 | None:intergenic | 55.0% |
| ! | GCTGGCTGTCCATTTGGTGA+GGG | - | chr1.4:39721539-39721558 | MS.gene37074:intron | 55.0% |
| ! | GGTCTAGGCGGTACTAGCTT+TGG | - | chr1.4:39721866-39721885 | MS.gene37074:intron | 55.0% |
| ! | TCGTATGCCTGGTCGAGTTG+AGG | - | chr1.4:39721835-39721854 | MS.gene37074:intron | 55.0% |
| ! | TGCTGGCTGTCCATTTGGTG+AGG | - | chr1.4:39721538-39721557 | MS.gene37074:intron | 55.0% |
| !! | ACCATCGCTCTGGAGCAAAG+GGG | + | chr1.4:39720335-39720354 | None:intergenic | 55.0% |
| !! | CAACCATCGCTCTGGAGCAA+AGG | + | chr1.4:39720337-39720356 | None:intergenic | 55.0% |
| !! | GAGGAGTGTCCGTGCTTCAT+AGG | - | chr1.4:39719154-39719173 | MS.gene37074:CDS | 55.0% |
| CAGTAGGAGGGAAGAGGCAG+AGG | + | chr1.4:39720697-39720716 | None:intergenic | 60.0% | |
| GAAGGAGCCTCAACTCGACC+AGG | + | chr1.4:39721845-39721864 | None:intergenic | 60.0% | |
| GAGGCTCCTTCTGGTCTAGG+CGG | - | chr1.4:39721854-39721873 | MS.gene37074:intron | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | + | chr1.4:39719149-39719168 | None:intergenic | 60.0% | |
| GCCCCACCTAAATCCACCCT+GGG | - | chr1.4:39722118-39722137 | MS.gene37074:intron | 60.0% | |
| GGTGGGGCGGCAACATTTCT+AGG | + | chr1.4:39721641-39721660 | None:intergenic | 60.0% | |
| TCAGGACGCAACCATCGCTC+TGG | + | chr1.4:39720345-39720364 | None:intergenic | 60.0% | |
| TCCCCTTTGCTCCAGAGCGA+TGG | - | chr1.4:39720331-39720350 | MS.gene37074:intron | 60.0% | |
| TGCCCCACCTAAATCCACCC+TGG | - | chr1.4:39722117-39722136 | MS.gene37074:intron | 60.0% | |
| TTGGGGTCGTGTCGGATACC+TGG | - | chr1.4:39719119-39719138 | MS.gene37074:CDS | 60.0% | |
| ! | CTCCTCGGATTAGGGTGTCC+AGG | + | chr1.4:39719140-39719159 | None:intergenic | 60.0% |
| ! | GCACCCAGGGTGGATTTAGG+TGG | + | chr1.4:39722124-39722143 | None:intergenic | 60.0% |
| ! | GGAGCACCCAGGGTGGATTT+AGG | + | chr1.4:39722127-39722146 | None:intergenic | 60.0% |
| ! | GGGGCGGCAACATTTCTAGG+AGG | + | chr1.4:39721638-39721657 | None:intergenic | 60.0% |
| !! | GGTCGAGTTGAGGCTCCTTC+TGG | - | chr1.4:39721845-39721864 | MS.gene37074:intron | 60.0% |
| !! | GTTAGAGACTGGTGGTGGGG+CGG | + | chr1.4:39721654-39721673 | None:intergenic | 60.0% |
| GGATGCCCGCAAACGAGGGA+GGG | - | chr1.4:39718652-39718671 | MS.gene37074:CDS | 65.0% | |
| TGGATGCCCGCAAACGAGGG+AGG | - | chr1.4:39718651-39718670 | MS.gene37074:CDS | 65.0% | |
| !! | ACCACCAGCAGGAGCACCCA+GGG | + | chr1.4:39722137-39722156 | None:intergenic | 65.0% |
| ACCCTGGGTGCTCCTGCTGG+TGG | - | chr1.4:39722133-39722152 | MS.gene37074:intron | 70.0% | |
| CTGGGTGCTCCTGCTGGTGG+TGG | - | chr1.4:39722136-39722155 | MS.gene37074:intron | 70.0% | |
| TCCACCCTGGGTGCTCCTGC+TGG | - | chr1.4:39722130-39722149 | MS.gene37074:intron | 70.0% | |
| !! | ACCAGCAGGAGCACCCAGGG+TGG | + | chr1.4:39722134-39722153 | None:intergenic | 70.0% |
| !! | CACCACCAGCAGGAGCACCC+AGG | + | chr1.4:39722138-39722157 | None:intergenic | 70.0% |
| ! | GCGGCTGGGCCACCACCAGC+AGG | + | chr1.4:39722148-39722167 | None:intergenic | 80.0% |
| !! | GGTGGTGGCCCAGCCGCACC+TGG | - | chr1.4:39722151-39722170 | MS.gene37074:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 39718650 | 39722285 | 39718650 | ID=MS.gene37074 |
| chr1.4 | mRNA | 39718650 | 39722285 | 39718650 | ID=MS.gene37074.t1;Parent=MS.gene37074 |
| chr1.4 | exon | 39722219 | 39722285 | 39722219 | ID=MS.gene37074.t1.exon1;Parent=MS.gene37074.t1 |
| chr1.4 | CDS | 39722219 | 39722285 | 39722219 | ID=cds.MS.gene37074.t1;Parent=MS.gene37074.t1 |
| chr1.4 | exon | 39721211 | 39721265 | 39721211 | ID=MS.gene37074.t1.exon2;Parent=MS.gene37074.t1 |
| chr1.4 | CDS | 39721211 | 39721265 | 39721211 | ID=cds.MS.gene37074.t1;Parent=MS.gene37074.t1 |
| chr1.4 | exon | 39718650 | 39719400 | 39718650 | ID=MS.gene37074.t1.exon3;Parent=MS.gene37074.t1 |
| chr1.4 | CDS | 39718650 | 39719400 | 39718650 | ID=cds.MS.gene37074.t1;Parent=MS.gene37074.t1 |
| Gene Sequence |
| Protein sequence |
