Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37775.t1 | AES76306.1 | 40.6 | 549 | 117 | 7 | 56 | 601 | 426 | 768 | 1.10E-82 | 318.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37775.t1 | G7KJR2 | 40.6 | 549 | 117 | 7 | 56 | 601 | 426 | 768 | 8.0e-83 | 318.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050496 | MS.gene37775 | -0.815708 | 8.05E-52 | -1.69E-46 |
MS.gene050612 | MS.gene37775 | -0.803174 | 3.95E-49 | -1.69E-46 |
MS.gene05104 | MS.gene37775 | 0.82692 | 2.08E-54 | -1.69E-46 |
MS.gene051138 | MS.gene37775 | 0.811917 | 5.51E-51 | -1.69E-46 |
MS.gene051651 | MS.gene37775 | 0.816317 | 5.89E-52 | -1.69E-46 |
MS.gene05589 | MS.gene37775 | -0.806102 | 9.68E-50 | -1.69E-46 |
MS.gene056198 | MS.gene37775 | 0.809921 | 1.49E-50 | -1.69E-46 |
MS.gene056504 | MS.gene37775 | -0.809082 | 2.26E-50 | -1.69E-46 |
MS.gene056856 | MS.gene37775 | 0.828124 | 1.07E-54 | -1.69E-46 |
MS.gene056857 | MS.gene37775 | 0.811181 | 7.96E-51 | -1.69E-46 |
MS.gene058603 | MS.gene37775 | 0.801618 | 8.27E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37775.t1 | MTR_6g075870 | 58.896 | 326 | 101 | 8 | 56 | 376 | 426 | 723 | 1.15e-103 | 337 |
MS.gene37775.t1 | MTR_6g075870 | 62.441 | 213 | 69 | 3 | 396 | 601 | 560 | 768 | 2.96e-72 | 252 |
MS.gene37775.t1 | MTR_6g075870 | 52.542 | 177 | 79 | 4 | 603 | 775 | 588 | 763 | 1.72e-42 | 166 |
MS.gene37775.t1 | MTR_6g078620 | 53.982 | 226 | 58 | 5 | 396 | 606 | 27 | 221 | 7.04e-61 | 205 |
MS.gene37775.t1 | MTR_6g078620 | 43.902 | 205 | 70 | 6 | 180 | 376 | 4 | 171 | 5.34e-37 | 139 |
MS.gene37775.t1 | MTR_6g078620 | 39.106 | 179 | 73 | 4 | 605 | 776 | 64 | 213 | 3.57e-25 | 105 |
MS.gene37775.t1 | MTR_6g078770 | 52.653 | 245 | 97 | 6 | 365 | 606 | 40 | 268 | 1.92e-60 | 208 |
MS.gene37775.t1 | MTR_6g078770 | 60.656 | 122 | 47 | 1 | 255 | 376 | 98 | 218 | 3.30e-36 | 140 |
MS.gene37775.t1 | MTR_6g078770 | 46.296 | 162 | 86 | 1 | 611 | 771 | 93 | 254 | 4.95e-31 | 125 |
MS.gene37775.t1 | MTR_6g078610 | 52.727 | 220 | 90 | 3 | 397 | 603 | 532 | 750 | 4.57e-55 | 204 |
MS.gene37775.t1 | MTR_6g078610 | 52.593 | 135 | 63 | 1 | 239 | 373 | 567 | 700 | 1.93e-30 | 129 |
MS.gene37775.t1 | MTR_6g078610 | 40.984 | 183 | 102 | 3 | 595 | 771 | 557 | 739 | 1.70e-25 | 113 |
MS.gene37775.t1 | MTR_6g078630 | 40.000 | 280 | 126 | 7 | 76 | 341 | 28 | 279 | 6.59e-47 | 169 |
MS.gene37775.t1 | MTR_6g078630 | 53.846 | 143 | 49 | 1 | 396 | 521 | 137 | 279 | 2.17e-37 | 142 |
MS.gene37775.t1 | MTR_6g078630 | 45.545 | 101 | 52 | 2 | 603 | 700 | 178 | 278 | 1.86e-17 | 84.0 |
MS.gene37775.t1 | MTR_6g078770 | 42.857 | 245 | 90 | 7 | 365 | 606 | 40 | 237 | 1.21e-39 | 149 |
MS.gene37775.t1 | MTR_6g078770 | 62.000 | 100 | 37 | 1 | 255 | 354 | 98 | 196 | 2.27e-28 | 117 |
MS.gene37775.t1 | MTR_6g078770 | 35.802 | 162 | 72 | 2 | 611 | 771 | 93 | 223 | 6.82e-17 | 83.2 |
MS.gene37775.t1 | MTR_6g078580 | 53.472 | 144 | 61 | 2 | 53 | 196 | 11 | 148 | 2.44e-39 | 143 |
MS.gene37775.t1 | MTR_5g073840 | 47.222 | 144 | 74 | 2 | 446 | 589 | 18 | 159 | 1.57e-29 | 119 |
MS.gene37775.t1 | MTR_5g073840 | 47.863 | 117 | 59 | 2 | 257 | 373 | 9 | 123 | 3.64e-23 | 100 |
MS.gene37775.t1 | MTR_5g073840 | 35.294 | 153 | 97 | 2 | 627 | 778 | 18 | 169 | 9.76e-17 | 81.6 |
MS.gene37775.t1 | MTR_5g073620 | 42.949 | 156 | 87 | 1 | 446 | 601 | 18 | 171 | 2.11e-29 | 126 |
MS.gene37775.t1 | MTR_5g073620 | 49.550 | 111 | 54 | 2 | 266 | 376 | 18 | 126 | 8.69e-22 | 102 |
MS.gene37775.t1 | MTR_5g073620 | 33.721 | 172 | 107 | 4 | 608 | 776 | 2 | 169 | 5.55e-17 | 86.3 |
MS.gene37775.t1 | MTR_5g074450 | 44.156 | 154 | 84 | 1 | 446 | 599 | 18 | 169 | 7.15e-27 | 116 |
MS.gene37775.t1 | MTR_5g074450 | 50.435 | 115 | 52 | 3 | 266 | 377 | 18 | 130 | 2.13e-22 | 102 |
MS.gene37775.t1 | MTR_5g074450 | 32.927 | 164 | 108 | 2 | 621 | 783 | 12 | 174 | 1.11e-12 | 71.6 |
MS.gene37775.t1 | MTR_5g073920 | 41.975 | 162 | 88 | 3 | 446 | 607 | 18 | 173 | 3.83e-26 | 115 |
MS.gene37775.t1 | MTR_5g073920 | 47.328 | 131 | 59 | 4 | 248 | 376 | 1 | 123 | 1.97e-20 | 97.1 |
MS.gene37775.t1 | MTR_5g073920 | 32.192 | 146 | 94 | 2 | 627 | 771 | 18 | 159 | 1.93e-13 | 74.7 |
MS.gene37775.t1 | MTR_5g073880 | 42.636 | 129 | 72 | 1 | 446 | 574 | 19 | 145 | 4.24e-26 | 108 |
MS.gene37775.t1 | MTR_5g073880 | 41.732 | 127 | 71 | 2 | 251 | 376 | 3 | 127 | 8.71e-21 | 93.6 |
MS.gene37775.t1 | MTR_5g073880 | 36.154 | 130 | 78 | 3 | 607 | 735 | 2 | 127 | 2.31e-15 | 77.4 |
MS.gene37775.t1 | MTR_5g093530 | 39.759 | 166 | 96 | 2 | 446 | 611 | 19 | 180 | 2.18e-25 | 112 |
MS.gene37775.t1 | MTR_5g093530 | 47.287 | 129 | 61 | 3 | 251 | 376 | 3 | 127 | 1.24e-20 | 97.1 |
MS.gene37775.t1 | MTR_5g093530 | 32.386 | 176 | 108 | 4 | 607 | 778 | 2 | 170 | 1.28e-14 | 78.2 |
MS.gene37775.t1 | MTR_3g464010 | 40.385 | 156 | 87 | 2 | 439 | 590 | 11 | 164 | 2.31e-25 | 112 |
MS.gene37775.t1 | MTR_3g464010 | 45.600 | 125 | 66 | 2 | 252 | 376 | 4 | 126 | 2.63e-20 | 96.7 |
MS.gene37775.t1 | MTR_3g464010 | 31.214 | 173 | 110 | 4 | 611 | 778 | 5 | 173 | 8.10e-15 | 79.0 |
MS.gene37775.t1 | MTR_5g074130 | 39.344 | 183 | 98 | 3 | 446 | 626 | 19 | 190 | 9.48e-25 | 110 |
MS.gene37775.t1 | MTR_5g074130 | 45.926 | 135 | 63 | 4 | 249 | 377 | 1 | 131 | 3.76e-21 | 99.4 |
MS.gene37775.t1 | MTR_5g074130 | 32.955 | 176 | 107 | 4 | 607 | 778 | 2 | 170 | 8.48e-15 | 79.0 |
MS.gene37775.t1 | MTR_5g073460 | 39.024 | 164 | 94 | 2 | 446 | 605 | 18 | 179 | 2.11e-24 | 109 |
MS.gene37775.t1 | MTR_5g073460 | 42.149 | 121 | 64 | 2 | 258 | 376 | 10 | 126 | 5.23e-18 | 89.4 |
MS.gene37775.t1 | MTR_5g073460 | 34.211 | 152 | 96 | 3 | 627 | 776 | 18 | 167 | 1.32e-14 | 78.2 |
MS.gene37775.t1 | MTR_5g074090 | 38.514 | 148 | 90 | 1 | 446 | 593 | 18 | 164 | 2.81e-24 | 102 |
MS.gene37775.t1 | MTR_5g074090 | 41.463 | 123 | 62 | 4 | 258 | 376 | 11 | 127 | 3.32e-17 | 82.4 |
MS.gene37775.t1 | MTR_5g074090 | 29.885 | 174 | 111 | 4 | 627 | 794 | 18 | 186 | 1.66e-12 | 68.6 |
MS.gene37775.t1 | MTR_5g074200 | 38.125 | 160 | 97 | 1 | 443 | 602 | 12 | 169 | 4.05e-24 | 104 |
MS.gene37775.t1 | MTR_5g074200 | 44.262 | 122 | 65 | 2 | 255 | 376 | 5 | 123 | 1.06e-20 | 94.4 |
MS.gene37775.t1 | MTR_5g074200 | 31.169 | 154 | 104 | 2 | 624 | 776 | 12 | 164 | 8.70e-14 | 73.9 |
MS.gene37775.t1 | MTR_5g073480 | 37.821 | 156 | 95 | 1 | 446 | 601 | 18 | 171 | 4.53e-24 | 108 |
MS.gene37775.t1 | MTR_5g073480 | 41.600 | 125 | 71 | 2 | 252 | 376 | 4 | 126 | 1.32e-18 | 90.9 |
MS.gene37775.t1 | MTR_5g073480 | 30.137 | 146 | 100 | 2 | 627 | 771 | 18 | 162 | 4.33e-12 | 70.1 |
MS.gene37775.t1 | MTR_5g073860 | 44.915 | 118 | 62 | 2 | 439 | 556 | 25 | 139 | 8.25e-23 | 101 |
MS.gene37775.t1 | MTR_5g073860 | 43.697 | 119 | 60 | 3 | 257 | 373 | 23 | 136 | 1.47e-20 | 95.1 |
MS.gene37775.t1 | MTR_5g073860 | 36.842 | 114 | 61 | 5 | 627 | 735 | 32 | 139 | 3.00e-11 | 66.6 |
MS.gene37775.t1 | MTR_5g074190 | 35.955 | 178 | 109 | 2 | 438 | 615 | 7 | 179 | 6.69e-22 | 100 |
MS.gene37775.t1 | MTR_5g074190 | 43.089 | 123 | 62 | 4 | 253 | 373 | 1 | 117 | 4.52e-17 | 85.5 |
MS.gene37775.t1 | MTR_5g074190 | 28.947 | 152 | 103 | 3 | 627 | 776 | 15 | 163 | 5.89e-11 | 66.2 |
MS.gene37775.t1 | MTR_5g073960 | 36.471 | 170 | 106 | 1 | 446 | 615 | 18 | 185 | 8.84e-21 | 96.3 |
MS.gene37775.t1 | MTR_5g073960 | 44.643 | 112 | 59 | 3 | 253 | 363 | 4 | 113 | 8.96e-18 | 87.0 |
MS.gene37775.t1 | MTR_5g073610 | 35.669 | 157 | 99 | 2 | 446 | 601 | 18 | 173 | 1.39e-19 | 91.3 |
MS.gene37775.t1 | MTR_5g073610 | 36.134 | 119 | 75 | 1 | 258 | 376 | 10 | 127 | 7.93e-14 | 73.9 |
MS.gene37775.t1 | MTR_5g073610 | 30.058 | 173 | 110 | 5 | 609 | 776 | 3 | 169 | 1.87e-12 | 69.7 |
MS.gene37775.t1 | MTR_5g073810 | 35.032 | 157 | 100 | 2 | 446 | 601 | 18 | 173 | 1.77e-19 | 92.4 |
MS.gene37775.t1 | MTR_5g073810 | 39.496 | 119 | 71 | 1 | 258 | 376 | 10 | 127 | 1.30e-16 | 83.6 |
MS.gene37775.t1 | MTR_5g073810 | 37.168 | 113 | 64 | 3 | 627 | 735 | 18 | 127 | 2.33e-11 | 67.0 |
MS.gene37775.t1 | MTR_5g074150 | 35.417 | 144 | 91 | 1 | 446 | 589 | 29 | 170 | 2.16e-18 | 86.3 |
MS.gene37775.t1 | MTR_5g074150 | 38.053 | 113 | 64 | 2 | 266 | 376 | 29 | 137 | 2.48e-13 | 71.2 |
MS.gene37775.t1 | MTR_5g074150 | 26.519 | 181 | 119 | 4 | 602 | 778 | 10 | 180 | 1.19e-11 | 66.2 |
MS.gene37775.t1 | MTR_5g073750 | 34.868 | 152 | 96 | 2 | 446 | 596 | 18 | 167 | 4.22e-18 | 85.9 |
MS.gene37775.t1 | MTR_5g073750 | 36.134 | 119 | 74 | 1 | 258 | 376 | 10 | 126 | 8.70e-15 | 76.3 |
MS.gene37775.t1 | MTR_5g073750 | 32.450 | 151 | 99 | 3 | 627 | 775 | 18 | 167 | 2.42e-12 | 68.9 |
MS.gene37775.t1 | MTR_5g074070 | 37.063 | 143 | 68 | 3 | 446 | 588 | 18 | 138 | 8.98e-14 | 72.4 |
MS.gene37775.t1 | MTR_8g075440 | 34.010 | 197 | 96 | 9 | 74 | 248 | 33 | 217 | 1.47e-12 | 72.0 |
MS.gene37775.t1 | MTR_5g093540 | 31.724 | 145 | 71 | 2 | 446 | 590 | 15 | 131 | 1.72e-12 | 68.6 |
MS.gene37775.t1 | MTR_5g073830 | 50.746 | 67 | 33 | 0 | 267 | 333 | 19 | 85 | 1.17e-11 | 65.5 |
MS.gene37775.t1 | MTR_5g073660 | 53.226 | 62 | 28 | 1 | 258 | 318 | 29 | 90 | 3.04e-11 | 65.5 |
MS.gene37775.t1 | MTR_5g073820 | 63.265 | 49 | 18 | 0 | 266 | 314 | 37 | 85 | 8.64e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 144 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATTCCCACGCTTTAATTAA+TGG | 0.126379 | 6.3:+72591386 | None:intergenic |
CATCACTTTGACAAGCTTAA+TGG | 0.172696 | 6.3:-72591270 | MS.gene37775:CDS |
CTTGAATAACTTTGCGAGTT+TGG | 0.175758 | 6.3:+72599828 | None:intergenic |
CCTTCTTTCAATCGATTATT+TGG | 0.211188 | 6.3:-72599704 | MS.gene37775:CDS |
TCAAGTTATGATTTCACTTA+TGG | 0.216045 | 6.3:-72591498 | MS.gene37775:CDS |
TGGGAAGGCTCCCCTTCTAT+TGG | 0.233147 | 6.3:+72601078 | None:intergenic |
GGGAAGGCTCCCCTTCTATT+GGG | 0.234887 | 6.3:+72601079 | None:intergenic |
AAACAATATGCTGGTTAATA+TGG | 0.278038 | 6.3:+72591871 | None:intergenic |
GGTGTGTTCTCATATTTCTT+AGG | 0.278645 | 6.3:-72591641 | MS.gene37775:CDS |
TCGGAAACACTACGTGAAAT+TGG | 0.281415 | 6.3:+72599857 | None:intergenic |
ATTCAAAGCTTTCACTAGAT+TGG | 0.287781 | 6.3:+72600827 | None:intergenic |
CCTTCTTTCGACCGATTAAT+AGG | 0.293258 | 6.3:-72591941 | MS.gene37775:CDS |
TTGAATAACTTTGCGAGTTT+GGG | 0.294985 | 6.3:+72599829 | None:intergenic |
TTCAAAGCTTTCACTAGATT+GGG | 0.295824 | 6.3:+72600828 | None:intergenic |
TGAGAAGTTTGAGAATCTTC+TGG | 0.306868 | 6.3:+72592058 | None:intergenic |
GAAATTACACTCAGTATGTT+AGG | 0.310028 | 6.3:+72599491 | None:intergenic |
GAAACAGCACTCAGTGTGTT+AGG | 0.334695 | 6.3:+72591191 | None:intergenic |
AACCCTAGCTATATATATAA+AGG | 0.344448 | 6.3:-72601056 | MS.gene37775:CDS |
TATAATGTTGATTTCACTTA+GGG | 0.369235 | 6.3:-72599804 | MS.gene37775:CDS |
TACAATCTTGCATTAGTCAT+TGG | 0.369875 | 6.3:-72601112 | MS.gene37775:CDS |
TTCAAATGGTGCATTTGCTT+TGG | 0.377370 | 6.3:-72599471 | MS.gene37775:CDS |
AAAGGATATTCGTGGGAGTA+TGG | 0.377721 | 6.3:-72600570 | MS.gene37775:CDS |
TAAAGCGTGGGAATCTTTCA+TGG | 0.381576 | 6.3:-72591378 | MS.gene37775:CDS |
GGCTTTATGTCATGTATTGT+TGG | 0.382557 | 6.3:-72599749 | MS.gene37775:CDS |
GAGGCACAGTCCCCAATAGA+AGG | 0.386955 | 6.3:-72601090 | MS.gene37775:CDS |
GTTCCCACCTTCCTATTAAT+CGG | 0.390118 | 6.3:+72591930 | None:intergenic |
TGCAAATGTTCACAATCAAT+TGG | 0.397001 | 6.3:-72591070 | MS.gene37775:CDS |
TTTAAGTTTAAATCTGAGAT+TGG | 0.401312 | 6.3:-72591662 | MS.gene37775:CDS |
TTCAAACGCTGCGTTTGCTT+TGG | 0.402687 | 6.3:-72591708 | MS.gene37775:CDS |
ATCTTCATCCTCATTGATAA+AGG | 0.403752 | 6.3:+72600788 | None:intergenic |
TTTCCTTTATATATATAGCT+AGG | 0.405656 | 6.3:+72601053 | None:intergenic |
ATGTTCCCTATGTTCTCAAT+TGG | 0.405865 | 6.3:-72591101 | MS.gene37775:CDS |
CGTGAAATTGGAGAAACTTC+AGG | 0.410441 | 6.3:+72599869 | None:intergenic |
GGCCTTATGTCAAGTTTAGT+TGG | 0.413107 | 6.3:-72591986 | MS.gene37775:CDS |
TGAATGCCATAAAAGAATCT+AGG | 0.424378 | 6.3:-72600758 | MS.gene37775:CDS |
TTCAACTGTTAACCATCAAC+TGG | 0.434082 | 6.3:-72591607 | MS.gene37775:CDS |
TTTATATATATAGCTAGGGT+TGG | 0.435997 | 6.3:+72601058 | None:intergenic |
TACTCCCACGAATATCCTTT+AGG | 0.437556 | 6.3:+72600573 | None:intergenic |
CACACTGAGTGCTGTTTCAA+AGG | 0.440916 | 6.3:-72591186 | MS.gene37775:CDS |
AGGAAGGTGGGAACCTTTCA+AGG | 0.441327 | 6.3:-72591921 | MS.gene37775:CDS |
CCTATTAATCGGTCGAAAGA+AGG | 0.441820 | 6.3:+72591941 | None:intergenic |
TATCAACAATATCGTGGAAC+AGG | 0.444945 | 6.3:-72592257 | MS.gene37775:CDS |
AAGAAGTTGCACAATCTTTG+CGG | 0.445919 | 6.3:-72591807 | MS.gene37775:CDS |
TGGAAGGTGGAATCCTTTCA+AGG | 0.450209 | 6.3:-72599684 | MS.gene37775:CDS |
TTTCTTACTGCATTGTGTAA+AGG | 0.451298 | 6.3:+72592211 | None:intergenic |
CCAAATAATCGATTGAAAGA+AGG | 0.455550 | 6.3:+72599704 | None:intergenic |
GAGACGACTTGGAGAGTAGT+TGG | 0.457566 | 6.3:-72599770 | MS.gene37775:CDS |
GAAACTACACTCAGTATGTC+AGG | 0.458831 | 6.3:+72591728 | None:intergenic |
CCCGGCTGGTATTTCAAAGA+TGG | 0.461026 | 6.3:-72600495 | MS.gene37775:CDS |
TCTCTATGTAGCGTTGTCCT+TGG | 0.462768 | 6.3:-72599657 | MS.gene37775:CDS |
CAAATAATCGATTGAAAGAA+GGG | 0.463180 | 6.3:+72599705 | None:intergenic |
GTTCCCATTCTTGTTCAATA+CGG | 0.468736 | 6.3:-72600684 | MS.gene37775:CDS |
CTCTCCGTATTGAACAAGAA+TGG | 0.469553 | 6.3:+72600680 | None:intergenic |
AACCAACTAAACTTGACATA+AGG | 0.474130 | 6.3:+72591984 | None:intergenic |
GTTGAATGTGGTGACCGCTT+TGG | 0.475982 | 6.3:+72591308 | None:intergenic |
TTTCTTACTGTGGTGTGTAA+AGG | 0.477614 | 6.3:+72600060 | None:intergenic |
TTATCACTTTCCACAGGGAT+TGG | 0.478626 | 6.3:-72591839 | MS.gene37775:CDS |
CTTTCAATCGATTATTTGGA+AGG | 0.479828 | 6.3:-72599700 | MS.gene37775:CDS |
TTATAATGTTGATTTCACTT+AGG | 0.485786 | 6.3:-72599805 | MS.gene37775:CDS |
GTAAAGCCAATTGAGAACAT+AGG | 0.488876 | 6.3:+72591095 | None:intergenic |
TGATTCAAGCTGAGACGACT+TGG | 0.494057 | 6.3:-72599781 | MS.gene37775:CDS |
GATGTCTTGAGGATGCTTAA+TGG | 0.496116 | 6.3:-72600090 | MS.gene37775:CDS |
TTCCTTTATATATATAGCTA+GGG | 0.496173 | 6.3:+72601054 | None:intergenic |
TTATATATATAGCTAGGGTT+GGG | 0.497153 | 6.3:+72601059 | None:intergenic |
ATTGAACAAGAATGGGAACT+TGG | 0.499810 | 6.3:+72600688 | None:intergenic |
ATACTGAGTGTAATTTCAAA+TGG | 0.499920 | 6.3:-72599485 | MS.gene37775:CDS |
CGGTAAGTTTGATCATGATA+AGG | 0.500587 | 6.3:-72591126 | MS.gene37775:CDS |
CTGCTTTGCAAACAATATGC+TGG | 0.504645 | 6.3:+72591862 | None:intergenic |
GGAAGGCTCCCCTTCTATTG+GGG | 0.508434 | 6.3:+72601080 | None:intergenic |
GAATATCCTTTAGGATCGTC+CGG | 0.509658 | 6.3:+72600582 | None:intergenic |
GAGACGACATGGAGAGTAGT+TGG | 0.511616 | 6.3:-72591464 | MS.gene37775:CDS |
CCTGCAGTGTCGTGTGTTCG+TGG | 0.511939 | 6.3:+72595987 | None:intergenic |
TGACCGCTTTGGAAACAATA+TGG | 0.513448 | 6.3:+72591319 | None:intergenic |
CTATTAATCGGTCGAAAGAA+GGG | 0.513698 | 6.3:+72591942 | None:intergenic |
TAAAGCCAATTGAGAACATA+GGG | 0.513735 | 6.3:+72591096 | None:intergenic |
CTTTCGACCGATTAATAGGA+AGG | 0.514540 | 6.3:-72591937 | MS.gene37775:CDS |
GAGACCACATGGAGAGTAGT+TGG | 0.519167 | 6.3:-72592007 | MS.gene37775:CDS |
TCTCCGTATTGAACAAGAAT+GGG | 0.520188 | 6.3:+72600681 | None:intergenic |
CGATCCATTAATTAAAGCGT+GGG | 0.522600 | 6.3:-72591390 | MS.gene37775:CDS |
CTTGAGTATCAAAGTGCTGT+GGG | 0.523746 | 6.3:-72590991 | MS.gene37775:CDS |
GCATGCTTTATCACTTCAGA+AGG | 0.525876 | 6.3:+72600621 | None:intergenic |
AATCTTGCATTAGTCATTGG+AGG | 0.527523 | 6.3:-72601109 | MS.gene37775:CDS |
TGCATACAAAATTTATGCTC+CGG | 0.528633 | 6.3:-72600601 | MS.gene37775:CDS |
CCCATCTTTGAAATACCAGC+CGG | 0.530072 | 6.3:+72600494 | None:intergenic |
AAGCAGTTATCACTTTCCAC+AGG | 0.534315 | 6.3:-72591845 | MS.gene37775:CDS |
TAATAGCTGAAAAGCCCGGC+TGG | 0.535983 | 6.3:-72600509 | MS.gene37775:CDS |
AACTACTCTCCATGTCGTCT+CGG | 0.538016 | 6.3:+72591466 | None:intergenic |
TCAAAGCTTTCACTAGATTG+GGG | 0.558218 | 6.3:+72600829 | None:intergenic |
TCTTGAGTATCAAAGTGCTG+TGG | 0.558740 | 6.3:-72590992 | MS.gene37775:CDS |
CCGGCTGGTATTTCAAAGAT+GGG | 0.563027 | 6.3:-72600494 | MS.gene37775:intron |
TGTTTCAAGCCGAGACGACA+TGG | 0.563601 | 6.3:-72591475 | MS.gene37775:CDS |
ACATAGAGAAAGGCCTTGAA+AGG | 0.564073 | 6.3:+72599671 | None:intergenic |
GGACAACGCTACATAGAGAA+AGG | 0.568008 | 6.3:+72599661 | None:intergenic |
ATATATAGCTAGGGTTGGGA+AGG | 0.568056 | 6.3:+72601063 | None:intergenic |
GAGCAGACAACCATAGATGA+TGG | 0.568549 | 6.3:+72591568 | None:intergenic |
ACAAGAATGGGAACTTGGAA+TGG | 0.568949 | 6.3:+72600693 | None:intergenic |
CCACGAACACACGACACTGC+AGG | 0.569872 | 6.3:-72595987 | MS.gene37775:intron |
CACACTGATAGATGTTAGCT+AGG | 0.571213 | 6.3:+72600942 | None:intergenic |
TTAATTAATGGATCGAAACA+AGG | 0.574546 | 6.3:+72591398 | None:intergenic |
CGACCGATTAATAGGAAGGT+GGG | 0.577006 | 6.3:-72591933 | MS.gene37775:CDS |
TTCTACGACAGAGCCGTGGA+TGG | 0.577115 | 6.3:-72591755 | MS.gene37775:CDS |
TATGCTGGTTAATATGGCTA+AGG | 0.578966 | 6.3:+72591877 | None:intergenic |
ACATTAAGCTTGCACAAACT+CGG | 0.579038 | 6.3:-72591146 | MS.gene37775:CDS |
CTAAGGACAACACTATATAG+AGG | 0.579448 | 6.3:+72591894 | None:intergenic |
CTGCAGTGTCGTGTGTTCGT+GGG | 0.579478 | 6.3:+72595988 | None:intergenic |
ATATAGAGGAAGACCTTGAA+AGG | 0.580546 | 6.3:+72591908 | None:intergenic |
ACGATCCTAAAGGATATTCG+TGG | 0.586304 | 6.3:-72600578 | MS.gene37775:CDS |
TCAATCGATTATTTGGAAGG+TGG | 0.586519 | 6.3:-72599697 | MS.gene37775:CDS |
TATGCTCCGGACGATCCTAA+AGG | 0.588176 | 6.3:-72600588 | MS.gene37775:CDS |
TCCTTAAGTTTGCACAAGAG+CGG | 0.589091 | 6.3:-72596035 | MS.gene37775:intron |
GTGAAAGCTTTGAATGAGAG+AGG | 0.589406 | 6.3:-72600819 | MS.gene37775:CDS |
AGGCACAGTCCCCAATAGAA+GGG | 0.590820 | 6.3:-72601089 | MS.gene37775:CDS |
TTTGCGAGTTTGGGAAACAT+CGG | 0.592371 | 6.3:+72599838 | None:intergenic |
TCTATAATAGCTGAAAAGCC+CGG | 0.599371 | 6.3:-72600513 | MS.gene37775:CDS |
TCGATCCATTAATTAAAGCG+TGG | 0.599960 | 6.3:-72591391 | MS.gene37775:CDS |
ATATCGTGGAACAGGTCTCA+AGG | 0.603796 | 6.3:-72592249 | MS.gene37775:CDS |
AGTTGAACATTCCGTGTGGA+AGG | 0.603820 | 6.3:+72599596 | None:intergenic |
TACAACGACACAGCCGTGAG+TGG | 0.606720 | 6.3:-72599518 | MS.gene37775:CDS |
CCATCTTTGAAATACCAGCC+GGG | 0.611233 | 6.3:+72600495 | None:intergenic |
CAAAGCTTTCACTAGATTGG+GGG | 0.612417 | 6.3:+72600830 | None:intergenic |
CAAGATTATCAACAATATCG+TGG | 0.614990 | 6.3:-72592263 | MS.gene37775:CDS |
TCGACCGATTAATAGGAAGG+TGG | 0.615536 | 6.3:-72591934 | MS.gene37775:CDS |
ATATAAAGACAGAGACCACA+TGG | 0.619565 | 6.3:-72592018 | MS.gene37775:CDS |
CATCCTCATTGATAAAGGTG+CGG | 0.627376 | 6.3:+72600793 | None:intergenic |
ACAGCACTTTGATACTCAAG+AGG | 0.629807 | 6.3:+72590994 | None:intergenic |
GGCACAGTCCCCAATAGAAG+GGG | 0.632637 | 6.3:-72601088 | MS.gene37775:CDS |
CGATCCTAAAGGATATTCGT+GGG | 0.636948 | 6.3:-72600577 | MS.gene37775:CDS |
CCACCATATTGTTTCCAAAG+CGG | 0.642819 | 6.3:-72591322 | MS.gene37775:CDS |
AGCAGTTATCACTTTCCACA+GGG | 0.648279 | 6.3:-72591844 | MS.gene37775:CDS |
TATGGTGGTTAAGATGGCCA+AGG | 0.649196 | 6.3:+72599640 | None:intergenic |
TCAAGAGGCATACAAAACAA+AGG | 0.655165 | 6.3:+72591009 | None:intergenic |
ATTCTTCTACGACAGAGCCG+TGG | 0.655506 | 6.3:-72591759 | MS.gene37775:CDS |
CTTGTTATCGTGCAGGTTTG+GGG | 0.667527 | 6.3:-72599899 | MS.gene37775:intron |
AATCCGCACCTTTATCAATG+AGG | 0.670824 | 6.3:-72600796 | MS.gene37775:CDS |
AGATTGTTGAAGATGTCTTG+AGG | 0.674191 | 6.3:-72600101 | MS.gene37775:CDS |
TTTGAGATGACCAATCCCTG+TGG | 0.674879 | 6.3:+72591829 | None:intergenic |
AGCGGTCACCACATTCAACA+TGG | 0.680361 | 6.3:-72591304 | MS.gene37775:CDS |
AGAAGGCATCACCTTCCACA+CGG | 0.683751 | 6.3:-72599607 | MS.gene37775:CDS |
GATAATCATCAAAACCACAA+AGG | 0.684961 | 6.3:+72599556 | None:intergenic |
TGAGCATACCATGTTGAATG+TGG | 0.685368 | 6.3:+72591296 | None:intergenic |
TTATACGACAGAGATATGAA+AGG | 0.688282 | 6.3:-72591218 | MS.gene37775:CDS |
CCGCTTTGGAAACAATATGG+TGG | 0.693265 | 6.3:+72591322 | None:intergenic |
TTTGAGTTGAACATTCCGTG+TGG | 0.720357 | 6.3:+72599592 | None:intergenic |
AAGGCCAACTACTCTCCATG+TGG | 0.732274 | 6.3:+72592003 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.3 | gene | 72590971 | 72601170 | 72590971 | ID=MS.gene37775 |
chr6.3 | mRNA | 72590971 | 72601170 | 72590971 | ID=MS.gene37775.t1;Parent=MS.gene37775 |
chr6.3 | exon | 72600947 | 72601170 | 72600947 | ID=MS.gene37775.t1.exon1;Parent=MS.gene37775.t1 |
chr6.3 | CDS | 72600947 | 72601170 | 72600947 | ID=cds.MS.gene37775.t1;Parent=MS.gene37775.t1 |
chr6.3 | exon | 72600495 | 72600857 | 72600495 | ID=MS.gene37775.t1.exon2;Parent=MS.gene37775.t1 |
chr6.3 | CDS | 72600495 | 72600857 | 72600495 | ID=cds.MS.gene37775.t1;Parent=MS.gene37775.t1 |
chr6.3 | exon | 72600068 | 72600152 | 72600068 | ID=MS.gene37775.t1.exon3;Parent=MS.gene37775.t1 |
chr6.3 | CDS | 72600068 | 72600152 | 72600068 | ID=cds.MS.gene37775.t1;Parent=MS.gene37775.t1 |
chr6.3 | exon | 72599466 | 72599906 | 72599466 | ID=MS.gene37775.t1.exon4;Parent=MS.gene37775.t1 |
chr6.3 | CDS | 72599466 | 72599906 | 72599466 | ID=cds.MS.gene37775.t1;Parent=MS.gene37775.t1 |
chr6.3 | exon | 72595988 | 72596049 | 72595988 | ID=MS.gene37775.t1.exon5;Parent=MS.gene37775.t1 |
chr6.3 | CDS | 72595988 | 72596049 | 72595988 | ID=cds.MS.gene37775.t1;Parent=MS.gene37775.t1 |
chr6.3 | exon | 72592219 | 72592303 | 72592219 | ID=MS.gene37775.t1.exon6;Parent=MS.gene37775.t1 |
chr6.3 | CDS | 72592219 | 72592303 | 72592219 | ID=cds.MS.gene37775.t1;Parent=MS.gene37775.t1 |
chr6.3 | exon | 72590971 | 72592095 | 72590971 | ID=MS.gene37775.t1.exon7;Parent=MS.gene37775.t1 |
chr6.3 | CDS | 72590971 | 72592095 | 72590971 | ID=cds.MS.gene37775.t1;Parent=MS.gene37775.t1 |
Gene Sequence |
Protein sequence |