Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056198.t1 | XP_013445083.1 | 98.4 | 313 | 5 | 0 | 1 | 313 | 1 | 313 | 4.40E-168 | 600.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056198.t1 | P51074 | 68.2 | 314 | 99 | 1 | 1 | 313 | 1 | 314 | 3.6e-118 | 426.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056198.t1 | O65848 | 98.4 | 313 | 5 | 0 | 1 | 313 | 1 | 313 | 3.2e-168 | 600.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049611 | MS.gene056198 | 0.817653 | 2.95E-52 | -1.69E-46 |
| MS.gene050082 | MS.gene056198 | 0.815239 | 1.02E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene056198 | -0.833415 | 5.40E-56 | -1.69E-46 |
| MS.gene050496 | MS.gene056198 | -0.841492 | 4.60E-58 | -1.69E-46 |
| MS.gene05104 | MS.gene056198 | 0.807528 | 4.84E-50 | -1.69E-46 |
| MS.gene051268 | MS.gene056198 | -0.802985 | 4.33E-49 | -1.69E-46 |
| MS.gene051651 | MS.gene056198 | 0.805058 | 1.60E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene056198 | 0.820877 | 5.44E-53 | -1.69E-46 |
| MS.gene053479 | MS.gene056198 | -0.845879 | 3.08E-59 | -1.69E-46 |
| MS.gene05589 | MS.gene056198 | -0.813089 | 3.05E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene056200 | 0.853852 | 1.82E-61 | -1.69E-46 |
| MS.gene056198 | MS.gene056387 | -0.828435 | 9.00E-55 | -1.69E-46 |
| MS.gene056198 | MS.gene056504 | -0.823996 | 1.02E-53 | -1.69E-46 |
| MS.gene056198 | MS.gene056694 | 0.810199 | 1.30E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene056697 | 0.800796 | 1.22E-48 | -1.69E-46 |
| MS.gene056198 | MS.gene056856 | 0.804602 | 2.00E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene057717 | 0.804698 | 1.91E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene057768 | 0.804449 | 2.15E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene058068 | 0.808094 | 3.67E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene058157 | -0.81243 | 4.26E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene058382 | 0.834098 | 3.65E-56 | -1.69E-46 |
| MS.gene056198 | MS.gene059023 | -0.802248 | 6.14E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene05926 | 0.80118 | 1.02E-48 | -1.69E-46 |
| MS.gene056198 | MS.gene06000 | -0.817258 | 3.62E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene060405 | 0.811919 | 5.50E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene061044 | 0.816996 | 4.15E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene061683 | 0.817664 | 2.93E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene061777 | 0.854097 | 1.54E-61 | -1.69E-46 |
| MS.gene056198 | MS.gene062121 | 0.805242 | 1.47E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene063674 | 0.807811 | 4.21E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene064062 | 0.813401 | 2.61E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene064707 | -0.823878 | 1.09E-53 | -1.69E-46 |
| MS.gene056198 | MS.gene065973 | 0.811473 | 6.88E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene066309 | 0.826446 | 2.70E-54 | -1.69E-46 |
| MS.gene056198 | MS.gene066358 | 0.811891 | 5.58E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene066359 | 0.821038 | 4.99E-53 | -1.69E-46 |
| MS.gene056198 | MS.gene069855 | -0.804863 | 1.76E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene069874 | 0.806042 | 9.97E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene07042 | 0.80252 | 5.40E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene071307 | -0.816412 | 5.60E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene071308 | -0.830114 | 3.52E-55 | -1.69E-46 |
| MS.gene056198 | MS.gene071403 | 0.815416 | 9.35E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene071405 | 0.804321 | 2.28E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene071643 | -0.810243 | 1.27E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene072007 | -0.815074 | 1.11E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene072875 | -0.812055 | 5.14E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene07302 | -0.803377 | 3.59E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene074291 | -0.821798 | 3.33E-53 | -1.69E-46 |
| MS.gene056198 | MS.gene074380 | -0.831782 | 1.37E-55 | -1.69E-46 |
| MS.gene056198 | MS.gene07440 | -0.803202 | 3.90E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene07443 | -0.801197 | 1.01E-48 | -1.69E-46 |
| MS.gene056198 | MS.gene07612 | 0.808047 | 3.75E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene08238 | 0.811034 | 8.57E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene08407 | 0.80694 | 6.44E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene08658 | 0.814486 | 1.50E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene08766 | -0.800775 | 1.23E-48 | -1.69E-46 |
| MS.gene056198 | MS.gene09072 | 0.804182 | 2.44E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene09795 | -0.832977 | 6.95E-56 | -1.69E-46 |
| MS.gene056198 | MS.gene09797 | -0.839745 | 1.32E-57 | -1.69E-46 |
| MS.gene056198 | MS.gene20109 | -0.80596 | 1.04E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene20813 | -0.800612 | 1.33E-48 | -1.69E-46 |
| MS.gene056198 | MS.gene20816 | -0.811557 | 6.60E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene22588 | -0.812897 | 3.37E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene22903 | -0.84386 | 1.08E-58 | -1.69E-46 |
| MS.gene056198 | MS.gene22911 | -0.845655 | 3.55E-59 | -1.69E-46 |
| MS.gene056198 | MS.gene24024 | -0.808543 | 2.94E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene24236 | 0.802238 | 6.17E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene24420 | 0.803367 | 3.61E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene24521 | 0.839747 | 1.32E-57 | -1.69E-46 |
| MS.gene056198 | MS.gene24522 | 0.836884 | 7.20E-57 | -1.69E-46 |
| MS.gene056198 | MS.gene26474 | 0.815388 | 9.48E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene26475 | 0.823787 | 1.15E-53 | -1.69E-46 |
| MS.gene056198 | MS.gene27790 | 0.838056 | 3.61E-57 | -1.69E-46 |
| MS.gene056198 | MS.gene28077 | 0.827149 | 1.84E-54 | -1.69E-46 |
| MS.gene056198 | MS.gene28334 | -0.839528 | 1.50E-57 | -1.69E-46 |
| MS.gene056198 | MS.gene28431 | 0.800271 | 1.56E-48 | -1.69E-46 |
| MS.gene056198 | MS.gene28603 | 0.802563 | 5.29E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene28802 | 0.808008 | 3.82E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene29925 | -0.818325 | 2.08E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene29927 | -0.820185 | 7.84E-53 | -1.69E-46 |
| MS.gene056198 | MS.gene30217 | 0.814834 | 1.26E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene30456 | 0.827271 | 1.72E-54 | -1.69E-46 |
| MS.gene056198 | MS.gene30459 | 0.819033 | 1.44E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene31061 | 0.828111 | 1.08E-54 | -1.69E-46 |
| MS.gene056198 | MS.gene31869 | -0.815932 | 7.17E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene33980 | 0.807349 | 5.28E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene35828 | 0.804834 | 1.79E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene35853 | 0.813384 | 2.63E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene36337 | -0.802455 | 5.56E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene37775 | 0.809921 | 1.49E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene38118 | 0.808494 | 3.01E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene41234 | -0.804471 | 2.13E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene42301 | -0.801917 | 7.18E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene43619 | -0.814019 | 1.91E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene44877 | 0.800093 | 1.69E-48 | -1.69E-46 |
| MS.gene056198 | MS.gene45482 | 0.813401 | 2.61E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene45607 | -0.800356 | 1.50E-48 | -1.69E-46 |
| MS.gene056198 | MS.gene45776 | 0.892139 | 2.09E-74 | -1.69E-46 |
| MS.gene056198 | MS.gene45779 | 0.880174 | 6.82E-70 | -1.69E-46 |
| MS.gene056198 | MS.gene46066 | 0.811535 | 6.67E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene46880 | -0.82753 | 1.49E-54 | -1.69E-46 |
| MS.gene056198 | MS.gene47902 | 0.80176 | 7.73E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene49425 | 0.803735 | 3.03E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene50073 | 0.810779 | 9.73E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene50264 | 0.827993 | 1.15E-54 | -1.69E-46 |
| MS.gene056198 | MS.gene50526 | -0.804667 | 1.94E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene50620 | 0.824906 | 6.26E-54 | -1.69E-46 |
| MS.gene056198 | MS.gene51150 | -0.803231 | 3.85E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene51748 | 0.806403 | 8.37E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene51887 | -0.819418 | 1.17E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene52027 | 0.808844 | 2.54E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene52976 | -0.807937 | 3.96E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene53435 | 0.804218 | 2.40E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene53595 | -0.813016 | 3.17E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene54068 | -0.805838 | 1.10E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene54574 | 0.801468 | 8.88E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene55079 | 0.805886 | 1.07E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene55697 | 0.833572 | 4.94E-56 | -1.69E-46 |
| MS.gene056198 | MS.gene55731 | -0.814666 | 1.37E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene55899 | 0.811785 | 5.88E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene56389 | 0.821129 | 4.76E-53 | -1.69E-46 |
| MS.gene056198 | MS.gene57291 | 0.855249 | 7.16E-62 | -1.69E-46 |
| MS.gene056198 | MS.gene58111 | 0.811395 | 7.15E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene58466 | -0.807142 | 5.84E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene59037 | 0.84414 | 9.09E-59 | -1.69E-46 |
| MS.gene056198 | MS.gene59475 | -0.806364 | 8.53E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene59657 | -0.820046 | 8.43E-53 | -1.69E-46 |
| MS.gene056198 | MS.gene60041 | 0.809242 | 2.08E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene60176 | -0.802101 | 6.58E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene60177 | -0.804851 | 1.77E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene61144 | -0.803835 | 2.88E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene61626 | 0.815755 | 7.86E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene62750 | -0.801797 | 7.60E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene63050 | -0.810378 | 1.19E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene63408 | -0.802505 | 5.43E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene63638 | 0.809587 | 1.76E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene63642 | 0.818016 | 2.44E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene64069 | 0.817353 | 3.45E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene65822 | 0.803755 | 3.00E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene66304 | 0.816647 | 4.97E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene66761 | 0.816922 | 4.31E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene67145 | 0.809415 | 1.91E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene68071 | -0.818609 | 1.79E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene69450 | -0.820167 | 7.91E-53 | -1.69E-46 |
| MS.gene056198 | MS.gene69468 | -0.814843 | 1.25E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene70257 | 0.805291 | 1.43E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene70809 | -0.819956 | 8.85E-53 | -1.69E-46 |
| MS.gene056198 | MS.gene71621 | -0.81643 | 5.55E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene73910 | -0.84615 | 2.60E-59 | -1.69E-46 |
| MS.gene056198 | MS.gene74028 | 0.80933 | 2.00E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene74352 | 0.829938 | 3.89E-55 | -1.69E-46 |
| MS.gene056198 | MS.gene74906 | 0.800612 | 1.33E-48 | -1.69E-46 |
| MS.gene056198 | MS.gene75365 | 0.815014 | 1.15E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene76418 | -0.804125 | 2.51E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene76539 | 0.802605 | 5.18E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene77768 | 0.818151 | 2.28E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene77774 | 0.812805 | 3.52E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene78356 | 0.820809 | 5.64E-53 | -1.69E-46 |
| MS.gene056198 | MS.gene78768 | 0.816633 | 5.00E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene79178 | 0.813068 | 3.09E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene79518 | 0.826384 | 2.80E-54 | -1.69E-46 |
| MS.gene056198 | MS.gene80239 | -0.815852 | 7.48E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene80476 | 0.805219 | 1.48E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene81725 | 0.806493 | 8.01E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene82778 | 0.801991 | 6.93E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene83941 | -0.800098 | 1.69E-48 | -1.69E-46 |
| MS.gene056198 | MS.gene84157 | 0.833159 | 6.26E-56 | -1.69E-46 |
| MS.gene056198 | MS.gene84585 | 0.804604 | 1.99E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene85154 | 0.809943 | 1.47E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene85496 | 0.81012 | 1.35E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene86145 | 0.800716 | 1.27E-48 | -1.69E-46 |
| MS.gene056198 | MS.gene86293 | -0.804532 | 2.07E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene86914 | -0.82408 | 9.80E-54 | -1.69E-46 |
| MS.gene056198 | MS.gene88666 | 0.811409 | 7.10E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene88812 | -0.808143 | 3.58E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene88880 | 0.802196 | 6.29E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene88882 | 0.803079 | 4.14E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene88958 | -0.802007 | 6.88E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene89722 | -0.81092 | 9.07E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene91236 | 0.804142 | 2.49E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene91317 | 0.86396 | 1.71E-64 | -1.69E-46 |
| MS.gene056198 | MS.gene91915 | -0.809084 | 2.25E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene92210 | 0.818531 | 1.87E-52 | -1.69E-46 |
| MS.gene056198 | MS.gene93105 | 0.801438 | 9.00E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene93265 | -0.810229 | 1.28E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene93924 | 0.805466 | 1.32E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene94623 | -0.806304 | 8.78E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene95132 | 0.811731 | 6.05E-51 | -1.69E-46 |
| MS.gene056198 | MS.gene95478 | 0.822022 | 2.96E-53 | -1.69E-46 |
| MS.gene056198 | MS.gene96299 | 0.80204 | 6.78E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene96549 | -0.8095 | 1.84E-50 | -1.69E-46 |
| MS.gene056198 | MS.gene96701 | 0.84995 | 2.33E-60 | -1.69E-46 |
| MS.gene056198 | MS.gene97437 | 0.803474 | 3.43E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene98077 | 0.801202 | 1.01E-48 | -1.69E-46 |
| MS.gene056198 | MS.gene98907 | 0.800202 | 1.61E-48 | -1.69E-46 |
| MS.gene056198 | MS.gene99043 | 0.847324 | 1.24E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056198.t1 | MTR_8g038210 | 98.403 | 313 | 5 | 0 | 1 | 313 | 1 | 313 | 0.0 | 625 |
| MS.gene056198.t1 | MTR_8g038210 | 94.569 | 313 | 17 | 0 | 1 | 313 | 1 | 313 | 0.0 | 600 |
| MS.gene056198.t1 | MTR_8g038220 | 76.433 | 314 | 73 | 1 | 1 | 313 | 1 | 314 | 1.84e-177 | 493 |
| MS.gene056198.t1 | MTR_8g038220 | 75.478 | 314 | 75 | 2 | 1 | 313 | 1 | 313 | 6.43e-174 | 484 |
| MS.gene056198.t1 | MTR_3g018780 | 71.656 | 314 | 88 | 1 | 1 | 313 | 1 | 314 | 1.05e-165 | 463 |
| MS.gene056198.t1 | MTR_3g018790 | 68.471 | 314 | 98 | 1 | 1 | 313 | 1 | 314 | 4.45e-158 | 444 |
| MS.gene056198.t1 | MTR_8g038180 | 70.513 | 312 | 91 | 1 | 1 | 311 | 1 | 312 | 2.32e-157 | 442 |
| MS.gene056198.t1 | MTR_3g018790 | 67.769 | 242 | 77 | 1 | 73 | 313 | 19 | 260 | 2.35e-117 | 338 |
| MS.gene056198.t1 | MTR_0276s0050 | 51.111 | 315 | 152 | 2 | 1 | 313 | 1 | 315 | 4.74e-101 | 299 |
| MS.gene056198.t1 | MTR_2g031980 | 45.367 | 313 | 170 | 1 | 1 | 312 | 1 | 313 | 1.12e-97 | 291 |
| MS.gene056198.t1 | MTR_5g063670 | 47.115 | 312 | 163 | 2 | 1 | 310 | 1 | 312 | 1.49e-96 | 288 |
| MS.gene056198.t1 | MTR_3g018920 | 56.667 | 210 | 60 | 1 | 1 | 210 | 1 | 179 | 3.70e-78 | 236 |
| MS.gene056198.t1 | MTR_8g038150 | 40.823 | 316 | 182 | 2 | 1 | 311 | 1 | 316 | 1.01e-75 | 235 |
| MS.gene056198.t1 | MTR_8g107640 | 36.825 | 315 | 197 | 2 | 1 | 313 | 1 | 315 | 5.18e-68 | 215 |
| MS.gene056198.t1 | MTR_1g033560 | 37.460 | 315 | 193 | 4 | 1 | 312 | 1 | 314 | 2.99e-65 | 208 |
| MS.gene056198.t1 | MTR_6g071605 | 37.500 | 312 | 193 | 2 | 1 | 310 | 1 | 312 | 3.72e-64 | 205 |
| MS.gene056198.t1 | MTR_6g071615 | 36.859 | 312 | 195 | 2 | 1 | 310 | 1 | 312 | 6.09e-61 | 197 |
| MS.gene056198.t1 | MTR_1g112520 | 34.615 | 312 | 202 | 2 | 1 | 310 | 1 | 312 | 2.17e-57 | 187 |
| MS.gene056198.t1 | MTR_6g071595 | 35.235 | 298 | 192 | 1 | 14 | 310 | 15 | 312 | 2.44e-55 | 182 |
| MS.gene056198.t1 | MTR_8g038170 | 35.647 | 317 | 178 | 7 | 13 | 311 | 4 | 312 | 8.14e-49 | 165 |
| MS.gene056198.t1 | MTR_8g038170 | 35.647 | 317 | 178 | 7 | 13 | 311 | 4 | 312 | 8.14e-49 | 165 |
| MS.gene056198.t1 | MTR_3g018925 | 71.134 | 97 | 28 | 0 | 217 | 313 | 13 | 109 | 9.45e-41 | 138 |
| MS.gene056198.t1 | MTR_6g071595 | 33.191 | 235 | 156 | 1 | 14 | 247 | 15 | 249 | 7.59e-39 | 138 |
| MS.gene056198.t1 | MTR_6g028030 | 26.984 | 315 | 213 | 7 | 8 | 311 | 2 | 310 | 1.61e-27 | 109 |
| MS.gene056198.t1 | MTR_8g038090 | 51.389 | 72 | 30 | 2 | 243 | 311 | 22 | 91 | 2.34e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056198.t1 | AT5G12380 | 54.662 | 311 | 140 | 1 | 1 | 310 | 1 | 311 | 8.35e-123 | 355 |
| MS.gene056198.t1 | AT1G35720 | 50.789 | 317 | 151 | 4 | 1 | 313 | 1 | 316 | 4.94e-106 | 312 |
| MS.gene056198.t1 | AT5G10230 | 51.603 | 312 | 149 | 2 | 1 | 310 | 1 | 312 | 1.65e-105 | 311 |
| MS.gene056198.t1 | AT5G10220 | 50.316 | 316 | 153 | 3 | 1 | 312 | 1 | 316 | 3.28e-101 | 300 |
| MS.gene056198.t1 | AT5G65020 | 50.799 | 313 | 151 | 3 | 1 | 310 | 1 | 313 | 3.62e-101 | 300 |
| MS.gene056198.t1 | AT5G65020 | 50.347 | 288 | 141 | 2 | 25 | 310 | 11 | 298 | 3.73e-92 | 276 |
| MS.gene056198.t1 | AT2G38760 | 40.881 | 318 | 180 | 3 | 1 | 310 | 1 | 318 | 3.25e-77 | 239 |
| MS.gene056198.t1 | AT1G68090 | 34.824 | 313 | 201 | 3 | 1 | 310 | 1 | 313 | 9.49e-58 | 189 |
| MS.gene056198.t1 | AT2G38750 | 33.117 | 308 | 180 | 7 | 25 | 313 | 19 | 319 | 5.18e-42 | 148 |
| MS.gene056198.t1 | AT2G38750 | 33.117 | 308 | 180 | 7 | 25 | 313 | 2 | 302 | 5.73e-42 | 147 |
| MS.gene056198.t1 | AT1G68090 | 33.600 | 250 | 163 | 3 | 1 | 247 | 1 | 250 | 1.73e-40 | 142 |
Find 76 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCAGTTTGTGCCAATTT+TGG | 0.171052 | 8.1:-65574453 | None:intergenic |
| CTCACATTCAAGAGCTCTTC+GGG | 0.248352 | 8.1:-65574132 | None:intergenic |
| GCACTCCTTGGAGGAAGATT+TGG | 0.307016 | 8.1:+65574179 | MS.gene056198:CDS |
| TGATGAGATCAATCCAAAAT+TGG | 0.309418 | 8.1:+65574440 | MS.gene056198:CDS |
| TGGGGCTAGTGACTGCATTT+AGG | 0.332932 | 8.1:+65574409 | MS.gene056198:CDS |
| GAAAACTGTGATAACAATAC+TGG | 0.337613 | 8.1:+65573797 | MS.gene056198:CDS |
| TGCGGAGCGTGATGCTGTTT+TGG | 0.342220 | 8.1:+65574044 | MS.gene056198:CDS |
| CAGCATCTTCATTGGGAGAA+TGG | 0.357218 | 8.1:-65573516 | None:intergenic |
| GGCGAAGATGGCCGGAGGTA+TGG | 0.357715 | 8.1:-65574206 | None:intergenic |
| AATGGTTGCTGGGAGCAATA+AGG | 0.357762 | 8.1:-65573498 | None:intergenic |
| AAGTTCCTTCTCACTCTCTT+GGG | 0.374265 | 8.1:+65575206 | MS.gene056198:CDS |
| GAAGTTCCTTCTCACTCTCT+TGG | 0.390889 | 8.1:+65575205 | MS.gene056198:CDS |
| AGATCCTTATAGCTTCTTCA+TGG | 0.393379 | 8.1:-65574515 | None:intergenic |
| GAAGCCATGAAGAAGCTATA+AGG | 0.406370 | 8.1:+65574511 | MS.gene056198:CDS |
| GTTGTGGCCAAGGAAACTTC+AGG | 0.410461 | 8.1:+65575173 | MS.gene056198:CDS |
| TAGAGCTTCAGCATCTTCAT+TGG | 0.413067 | 8.1:-65573524 | None:intergenic |
| TCTCACATTCAAGAGCTCTT+CGG | 0.418637 | 8.1:-65574133 | None:intergenic |
| GGTTGAATGTCGCAATCAGC+TGG | 0.437648 | 8.1:-65574557 | None:intergenic |
| ATAATCCCCTGAAGTTTCCT+TGG | 0.438084 | 8.1:-65575180 | None:intergenic |
| TTCATTGGGAGAATGGTTGC+TGG | 0.439937 | 8.1:-65573509 | None:intergenic |
| AGAGCTTCAGCATCTTCATT+GGG | 0.446820 | 8.1:-65573523 | None:intergenic |
| GCGAAGATGGCCGGAGGTAT+GGG | 0.459868 | 8.1:-65574205 | None:intergenic |
| ACTTGCCTGGCGAAGATGGC+CGG | 0.459954 | 8.1:-65574214 | None:intergenic |
| AAGGACTTGCCTGGCGAAGA+TGG | 0.468874 | 8.1:-65574218 | None:intergenic |
| TACCTCCGGCCATCTTCGCC+AGG | 0.472503 | 8.1:+65574209 | MS.gene056198:CDS |
| TGAGATCAAAGGAGACTTTG+AGG | 0.477521 | 8.1:+65573905 | MS.gene056198:CDS |
| ATGGTTGCTGGGAGCAATAA+GGG | 0.478955 | 8.1:-65573497 | None:intergenic |
| TTAATCTTTACAGAAGCTGT+TGG | 0.488422 | 8.1:+65574686 | MS.gene056198:intron |
| TTACAGAAGCTGTTGGATGA+AGG | 0.491044 | 8.1:+65574693 | MS.gene056198:intron |
| TGAGGATCTTATCAAACGAT+TGG | 0.500715 | 8.1:+65573878 | MS.gene056198:CDS |
| AAATTGGCACAAACTGAAGC+TGG | 0.505178 | 8.1:+65574456 | MS.gene056198:CDS |
| AGGATCTGATGAATTTCAAA+AGG | 0.509384 | 8.1:+65574713 | MS.gene056198:CDS |
| GATTTGGCTGCCCATACCTC+CGG | 0.515934 | 8.1:+65574195 | MS.gene056198:CDS |
| CAAACGCTACAAGCACTCCT+TGG | 0.517630 | 8.1:+65574167 | MS.gene056198:CDS |
| CTATAAGGATCTTGACTACA+AGG | 0.521148 | 8.1:+65574526 | MS.gene056198:CDS |
| TTATGAAGGCATTTATAATG+AGG | 0.522283 | 8.1:+65573860 | MS.gene056198:CDS |
| TCTTGAGCATGTTGTGGCCA+AGG | 0.526240 | 8.1:+65575163 | MS.gene056198:CDS |
| CGAGATGCAATCAAGAAGGT+TGG | 0.532695 | 8.1:+65575044 | MS.gene056198:CDS |
| GTGACTGCATTTAGGTATGT+TGG | 0.533407 | 8.1:+65574417 | MS.gene056198:CDS |
| CAAATCAGAAAAGCTTATGA+AGG | 0.541965 | 8.1:+65573846 | MS.gene056198:CDS |
| TCATGTCAAGTACTATGAAA+AGG | 0.546698 | 8.1:+65574767 | MS.gene056198:CDS |
| AAAACAGCATCACGCTCCGC+AGG | 0.547985 | 8.1:-65574042 | None:intergenic |
| ACGCTACAAGCACTCCTTGG+AGG | 0.551063 | 8.1:+65574170 | MS.gene056198:CDS |
| TTGTGGCCAAGGAAACTTCA+GGG | 0.559821 | 8.1:+65575174 | MS.gene056198:CDS |
| TTTATTATATACCTTAGTGA+TGG | 0.564240 | 8.1:-65574604 | None:intergenic |
| TCATTGGGAGAATGGTTGCT+GGG | 0.565172 | 8.1:-65573508 | None:intergenic |
| TCATGGTACTTCCATCACTA+AGG | 0.567292 | 8.1:+65574593 | MS.gene056198:CDS |
| AGATGCTGAAGCTCTAAGAA+AGG | 0.567867 | 8.1:+65573531 | MS.gene056198:CDS |
| AACAGAAAGCTGTGTACCGT+TGG | 0.569853 | 8.1:+65574010 | MS.gene056198:intron |
| AGCTGGAATTCTTCATGAGT+CGG | 0.569893 | 8.1:+65574473 | MS.gene056198:CDS |
| GAGTCGGTGAAAGAGAAGAA+AGG | 0.571277 | 8.1:+65574489 | MS.gene056198:CDS |
| TGGCCACAACATGCTCAAGA+AGG | 0.574445 | 8.1:-65575160 | None:intergenic |
| AGTTCCTTCTCACTCTCTTG+GGG | 0.584889 | 8.1:+65575207 | MS.gene056198:CDS |
| GTTGAATGTCGCAATCAGCT+GGG | 0.586442 | 8.1:-65574556 | None:intergenic |
| GCAAATGTTGCTATCAAGAG+TGG | 0.587800 | 8.1:+65574066 | MS.gene056198:CDS |
| CGATTGGAATCTGAGATCAA+AGG | 0.597023 | 8.1:+65573894 | MS.gene056198:CDS |
| TGTCCTTCTTGAGCATGTTG+TGG | 0.597064 | 8.1:+65575157 | MS.gene056198:CDS |
| ATCATTGAAGCAACGAATGG+TGG | 0.602219 | 8.1:-65574745 | None:intergenic |
| CAAGAAGGTTGGAACTGATG+AGG | 0.603021 | 8.1:+65575055 | MS.gene056198:CDS |
| GGCAGCCAAATCTTCCTCCA+AGG | 0.611461 | 8.1:-65574184 | None:intergenic |
| GAGCTCTGCTCACAATCACA+CGG | 0.617837 | 8.1:-65575088 | None:intergenic |
| TCACATTCAAGAGCTCTTCG+GGG | 0.618657 | 8.1:-65574131 | None:intergenic |
| GCTCTAAGAAAGGCTTTCGA+AGG | 0.621766 | 8.1:+65573541 | MS.gene056198:CDS |
| TACCATGAGTCTCTCTGTAG+CGG | 0.635249 | 8.1:-65574578 | None:intergenic |
| AAAACTGTGATAACAATACT+GGG | 0.637154 | 8.1:+65573798 | MS.gene056198:CDS |
| GTGCTTGTAGCGTTTGACGT+AGG | 0.638713 | 8.1:-65574160 | None:intergenic |
| CCGTTGGATACTTGAACCTG+CGG | 0.640493 | 8.1:+65574026 | MS.gene056198:CDS |
| CACATTCAAGAGCTCTTCGG+GGG | 0.640631 | 8.1:-65574130 | None:intergenic |
| GGTGCGAGATGCAATCAAGA+AGG | 0.643809 | 8.1:+65575040 | MS.gene056198:CDS |
| CTTTCCCCAAGAGAGTGAGA+AGG | 0.653124 | 8.1:-65575211 | None:intergenic |
| AGCTCTGCTCACAATCACAC+GGG | 0.668833 | 8.1:-65575087 | None:intergenic |
| CCGCAGGTTCAAGTATCCAA+CGG | 0.676153 | 8.1:-65574026 | None:intergenic |
| ATGATCATTGAAGCAACGAA+TGG | 0.676992 | 8.1:-65574748 | None:intergenic |
| TGTGGCCAAGGAAACTTCAG+GGG | 0.678511 | 8.1:+65575175 | MS.gene056198:CDS |
| TGCCTGGCGAAGATGGCCGG+AGG | 0.679116 | 8.1:-65574211 | None:intergenic |
| AACCGCTACAGAGAGACTCA+TGG | 0.682685 | 8.1:+65574576 | MS.gene056198:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTACATATATGAAAATT+AGG | + | chr8.1:65574312-65574331 | MS.gene056198:intron | 10.0% |
| !! | TTATGTTGTATTAAAATTGA+TGG | + | chr8.1:65573741-65573760 | MS.gene056198:intron | 15.0% |
| !!! | TTAATTTTGATACATTGTTA+AGG | + | chr8.1:65574821-65574840 | MS.gene056198:intron | 15.0% |
| !! | CACTAAGGTATATAATAAAA+AGG | + | chr8.1:65574608-65574627 | MS.gene056198:intron | 20.0% |
| !! | GTCTATAAACAAGAAAAAAA+GGG | - | chr8.1:65573577-65573596 | None:intergenic | 20.0% |
| !! | TCTATAAACAAGAAAAAAAG+GGG | - | chr8.1:65573576-65573595 | None:intergenic | 20.0% |
| !! | TTAAAATGACTAATGAAGTT+TGG | - | chr8.1:65573651-65573670 | None:intergenic | 20.0% |
| !! | TTTATTATATACCTTAGTGA+TGG | - | chr8.1:65574607-65574626 | None:intergenic | 20.0% |
| ! | AAAACTGTGATAACAATACT+GGG | + | chr8.1:65573798-65573817 | MS.gene056198:CDS | 25.0% |
| ! | AATATGCAATATTAGATCGT+GGG | + | chr8.1:65574261-65574280 | MS.gene056198:intron | 25.0% |
| ! | AGATATAATCTATAGGACTA+TGG | - | chr8.1:65573604-65573623 | None:intergenic | 25.0% |
| ! | AGTATGGTACTAAATCAATA+TGG | - | chr8.1:65573933-65573952 | None:intergenic | 25.0% |
| ! | CATATTGTTAGAAGAGTTAA+TGG | - | chr8.1:65574247-65574266 | None:intergenic | 25.0% |
| ! | GGTCTATAAACAAGAAAAAA+AGG | - | chr8.1:65573578-65573597 | None:intergenic | 25.0% |
| ! | GTTGTACATTGAAAACAAAT+CGG | + | chr8.1:65574849-65574868 | MS.gene056198:intron | 25.0% |
| ! | TGATGACAGATATAATCTAT+AGG | - | chr8.1:65573611-65573630 | None:intergenic | 25.0% |
| ! | TGTGATATTTCTTGAAATCA+TGG | + | chr8.1:65574347-65574366 | MS.gene056198:intron | 25.0% |
| ! | TTAGAAGAGTTAATGGAAAA+AGG | - | chr8.1:65574240-65574259 | None:intergenic | 25.0% |
| !!! | ATGATTCATTTTTGTAGGAT+GGG | + | chr8.1:65573764-65573783 | MS.gene056198:intron | 25.0% |
| !!! | TTATGAAGGCATTTATAATG+AGG | + | chr8.1:65573860-65573879 | MS.gene056198:CDS | 25.0% |
| ACAGCTTCTGTAAAGATTAA+AGG | - | chr8.1:65574686-65574705 | None:intergenic | 30.0% | |
| AGGATCTGATGAATTTCAAA+AGG | + | chr8.1:65574713-65574732 | MS.gene056198:CDS | 30.0% | |
| CAAAAACTACAATGTCATTG+TGG | + | chr8.1:65574089-65574108 | MS.gene056198:CDS | 30.0% | |
| CAAATCAGAAAAGCTTATGA+AGG | + | chr8.1:65573846-65573865 | MS.gene056198:CDS | 30.0% | |
| CAATATGCAATATTAGATCG+TGG | + | chr8.1:65574260-65574279 | MS.gene056198:intron | 30.0% | |
| CAGCTTCTGTAAAGATTAAA+GGG | - | chr8.1:65574685-65574704 | None:intergenic | 30.0% | |
| GAAAACTGTGATAACAATAC+TGG | + | chr8.1:65573797-65573816 | MS.gene056198:CDS | 30.0% | |
| TCATGTCAAGTACTATGAAA+AGG | + | chr8.1:65574767-65574786 | MS.gene056198:CDS | 30.0% | |
| TGATGAGATCAATCCAAAAT+TGG | + | chr8.1:65574440-65574459 | MS.gene056198:CDS | 30.0% | |
| TTAATCTTTACAGAAGCTGT+TGG | + | chr8.1:65574686-65574705 | MS.gene056198:intron | 30.0% | |
| ! | ACATTTTCTGATCATATCGT+AGG | + | chr8.1:65575016-65575035 | MS.gene056198:intron | 30.0% |
| ! | ATCATGGTTTCTTGATTTTG+TGG | + | chr8.1:65574363-65574382 | MS.gene056198:intron | 30.0% |
| ! | CTAGCACAACATTTTATGAA+TGG | - | chr8.1:65574877-65574896 | None:intergenic | 30.0% |
| !! | AAACATCTGAGATGACTTTT+AGG | - | chr8.1:65575121-65575140 | None:intergenic | 30.0% |
| !! | GATGATTCATTTTTGTAGGA+TGG | + | chr8.1:65573763-65573782 | MS.gene056198:intron | 30.0% |
| !! | GATGGATGATTCATTTTTGT+AGG | + | chr8.1:65573759-65573778 | MS.gene056198:intron | 30.0% |
| !! | TGATTCATTTTTGTAGGATG+GGG | + | chr8.1:65573765-65573784 | MS.gene056198:intron | 30.0% |
| !!! | TTGATTTTTTGAGCAGCTTT+TGG | + | chr8.1:65574386-65574405 | MS.gene056198:intron | 30.0% |
| AGATCCTTATAGCTTCTTCA+TGG | - | chr8.1:65574518-65574537 | None:intergenic | 35.0% | |
| ATATGAATAGTTGCGATGTG+TGG | - | chr8.1:65574944-65574963 | None:intergenic | 35.0% | |
| ATGATCATTGAAGCAACGAA+TGG | - | chr8.1:65574751-65574770 | None:intergenic | 35.0% | |
| CTAATAGAACATCGACAGTA+TGG | - | chr8.1:65573949-65573968 | None:intergenic | 35.0% | |
| CTATAAGGATCTTGACTACA+AGG | + | chr8.1:65574526-65574545 | MS.gene056198:CDS | 35.0% | |
| TAATCTATAGGACTATGGCA+TGG | - | chr8.1:65573599-65573618 | None:intergenic | 35.0% | |
| TGAGGATCTTATCAAACGAT+TGG | + | chr8.1:65573878-65573897 | MS.gene056198:CDS | 35.0% | |
| ! | TTTTCTGATCATATCGTAGG+TGG | + | chr8.1:65575019-65575038 | MS.gene056198:intron | 35.0% |
| !!! | ATTTTTTGAGCAGCTTTTGG+TGG | + | chr8.1:65574389-65574408 | MS.gene056198:intron | 35.0% |
| !!! | TTTTTTGAGCAGCTTTTGGT+GGG | + | chr8.1:65574390-65574409 | MS.gene056198:intron | 35.0% |
| AAATTGGCACAAACTGAAGC+TGG | + | chr8.1:65574456-65574475 | MS.gene056198:CDS | 40.0% | |
| AAGTTCCTTCTCACTCTCTT+GGG | + | chr8.1:65575206-65575225 | MS.gene056198:CDS | 40.0% | |
| AGAGCTTCAGCATCTTCATT+GGG | - | chr8.1:65573526-65573545 | None:intergenic | 40.0% | |
| AGCTGGAATTCTTCATGAGT+CGG | + | chr8.1:65574473-65574492 | MS.gene056198:CDS | 40.0% | |
| ATAATCCCCTGAAGTTTCCT+TGG | - | chr8.1:65575183-65575202 | None:intergenic | 40.0% | |
| ATCATTGAAGCAACGAATGG+TGG | - | chr8.1:65574748-65574767 | None:intergenic | 40.0% | |
| GAAGCCATGAAGAAGCTATA+AGG | + | chr8.1:65574511-65574530 | MS.gene056198:CDS | 40.0% | |
| GCAAATGTTGCTATCAAGAG+TGG | + | chr8.1:65574066-65574085 | MS.gene056198:CDS | 40.0% | |
| GTGACTGCATTTAGGTATGT+TGG | + | chr8.1:65574417-65574436 | MS.gene056198:CDS | 40.0% | |
| TAATGGAAAAAGGACTTGCC+TGG | - | chr8.1:65574230-65574249 | None:intergenic | 40.0% | |
| TAGAGCTTCAGCATCTTCAT+TGG | - | chr8.1:65573527-65573546 | None:intergenic | 40.0% | |
| TCATGGTACTTCCATCACTA+AGG | + | chr8.1:65574593-65574612 | MS.gene056198:CDS | 40.0% | |
| TCTCACATTCAAGAGCTCTT+CGG | - | chr8.1:65574136-65574155 | None:intergenic | 40.0% | |
| TGAGATCAAAGGAGACTTTG+AGG | + | chr8.1:65573905-65573924 | MS.gene056198:CDS | 40.0% | |
| TTACAGAAGCTGTTGGATGA+AGG | + | chr8.1:65574693-65574712 | MS.gene056198:intron | 40.0% | |
| ! | AGATCGTGGGTTTAAAATCG+CGG | + | chr8.1:65574274-65574293 | MS.gene056198:intron | 40.0% |
| ! | CGATTGGAATCTGAGATCAA+AGG | + | chr8.1:65573894-65573913 | MS.gene056198:CDS | 40.0% |
| ! | GCTTCAGTTTGTGCCAATTT+TGG | - | chr8.1:65574456-65574475 | None:intergenic | 40.0% |
| !! | AGATGCTGAAGCTCTAAGAA+AGG | + | chr8.1:65573531-65573550 | MS.gene056198:CDS | 40.0% |
| !! | TTTTTGAGCAGCTTTTGGTG+GGG | + | chr8.1:65574391-65574410 | MS.gene056198:intron | 40.0% |
| AACAGAAAGCTGTGTACCGT+TGG | + | chr8.1:65574010-65574029 | MS.gene056198:intron | 45.0% | |
| AATGGTTGCTGGGAGCAATA+AGG | - | chr8.1:65573501-65573520 | None:intergenic | 45.0% | |
| AGTTCCTTCTCACTCTCTTG+GGG | + | chr8.1:65575207-65575226 | MS.gene056198:CDS | 45.0% | |
| ATAGTTGCGATGTGTGGACA+TGG | - | chr8.1:65574938-65574957 | None:intergenic | 45.0% | |
| ATGGTTGCTGGGAGCAATAA+GGG | - | chr8.1:65573500-65573519 | None:intergenic | 45.0% | |
| CAAGAAGGTTGGAACTGATG+AGG | + | chr8.1:65575055-65575074 | MS.gene056198:CDS | 45.0% | |
| CAGCATCTTCATTGGGAGAA+TGG | - | chr8.1:65573519-65573538 | None:intergenic | 45.0% | |
| CGAGATGCAATCAAGAAGGT+TGG | + | chr8.1:65575044-65575063 | MS.gene056198:CDS | 45.0% | |
| CTCACATTCAAGAGCTCTTC+GGG | - | chr8.1:65574135-65574154 | None:intergenic | 45.0% | |
| GAAGTTCCTTCTCACTCTCT+TGG | + | chr8.1:65575205-65575224 | MS.gene056198:CDS | 45.0% | |
| GAGTCGGTGAAAGAGAAGAA+AGG | + | chr8.1:65574489-65574508 | MS.gene056198:CDS | 45.0% | |
| GTTGAATGTCGCAATCAGCT+GGG | - | chr8.1:65574559-65574578 | None:intergenic | 45.0% | |
| TACCATGAGTCTCTCTGTAG+CGG | - | chr8.1:65574581-65574600 | None:intergenic | 45.0% | |
| TCACATTCAAGAGCTCTTCG+GGG | - | chr8.1:65574134-65574153 | None:intergenic | 45.0% | |
| TCATTGGGAGAATGGTTGCT+GGG | - | chr8.1:65573511-65573530 | None:intergenic | 45.0% | |
| TGTCCTTCTTGAGCATGTTG+TGG | + | chr8.1:65575157-65575176 | MS.gene056198:CDS | 45.0% | |
| TTCATTGGGAGAATGGTTGC+TGG | - | chr8.1:65573512-65573531 | None:intergenic | 45.0% | |
| TTGTGGCCAAGGAAACTTCA+GGG | + | chr8.1:65575174-65575193 | MS.gene056198:CDS | 45.0% | |
| !! | GCTCTAAGAAAGGCTTTCGA+AGG | + | chr8.1:65573541-65573560 | MS.gene056198:CDS | 45.0% |
| AACCGCTACAGAGAGACTCA+TGG | + | chr8.1:65574576-65574595 | MS.gene056198:CDS | 50.0% | |
| AGCTCTGCTCACAATCACAC+GGG | - | chr8.1:65575090-65575109 | None:intergenic | 50.0% | |
| CAAACGCTACAAGCACTCCT+TGG | + | chr8.1:65574167-65574186 | MS.gene056198:CDS | 50.0% | |
| CACATTCAAGAGCTCTTCGG+GGG | - | chr8.1:65574133-65574152 | None:intergenic | 50.0% | |
| CCGCAGGTTCAAGTATCCAA+CGG | - | chr8.1:65574029-65574048 | None:intergenic | 50.0% | |
| CCGTTGGATACTTGAACCTG+CGG | + | chr8.1:65574026-65574045 | MS.gene056198:CDS | 50.0% | |
| CTTTCCCCAAGAGAGTGAGA+AGG | - | chr8.1:65575214-65575233 | None:intergenic | 50.0% | |
| GAGCTCTGCTCACAATCACA+CGG | - | chr8.1:65575091-65575110 | None:intergenic | 50.0% | |
| GCACTCCTTGGAGGAAGATT+TGG | + | chr8.1:65574179-65574198 | MS.gene056198:CDS | 50.0% | |
| GGTGCGAGATGCAATCAAGA+AGG | + | chr8.1:65575040-65575059 | MS.gene056198:CDS | 50.0% | |
| GGTTGAATGTCGCAATCAGC+TGG | - | chr8.1:65574560-65574579 | None:intergenic | 50.0% | |
| GTGCTTGTAGCGTTTGACGT+AGG | - | chr8.1:65574163-65574182 | None:intergenic | 50.0% | |
| GTTGTGGCCAAGGAAACTTC+AGG | + | chr8.1:65575173-65575192 | MS.gene056198:CDS | 50.0% | |
| TCTTGAGCATGTTGTGGCCA+AGG | + | chr8.1:65575163-65575182 | MS.gene056198:CDS | 50.0% | |
| TGGCCACAACATGCTCAAGA+AGG | - | chr8.1:65575163-65575182 | None:intergenic | 50.0% | |
| TGTGGCCAAGGAAACTTCAG+GGG | + | chr8.1:65575175-65575194 | MS.gene056198:CDS | 50.0% | |
| ! | TGGGGCTAGTGACTGCATTT+AGG | + | chr8.1:65574409-65574428 | MS.gene056198:CDS | 50.0% |
| AAAACAGCATCACGCTCCGC+AGG | - | chr8.1:65574045-65574064 | None:intergenic | 55.0% | |
| AAGGACTTGCCTGGCGAAGA+TGG | - | chr8.1:65574221-65574240 | None:intergenic | 55.0% | |
| ACGCTACAAGCACTCCTTGG+AGG | + | chr8.1:65574170-65574189 | MS.gene056198:CDS | 55.0% | |
| GATTTGGCTGCCCATACCTC+CGG | + | chr8.1:65574195-65574214 | MS.gene056198:CDS | 55.0% | |
| GGCAGCCAAATCTTCCTCCA+AGG | - | chr8.1:65574187-65574206 | None:intergenic | 55.0% | |
| !! | TGCGGAGCGTGATGCTGTTT+TGG | + | chr8.1:65574044-65574063 | MS.gene056198:CDS | 55.0% |
| ACTTGCCTGGCGAAGATGGC+CGG | - | chr8.1:65574217-65574236 | None:intergenic | 60.0% | |
| ! | GCGAAGATGGCCGGAGGTAT+GGG | - | chr8.1:65574208-65574227 | None:intergenic | 60.0% |
| GGCGAAGATGGCCGGAGGTA+TGG | - | chr8.1:65574209-65574228 | None:intergenic | 65.0% | |
| TACCTCCGGCCATCTTCGCC+AGG | + | chr8.1:65574209-65574228 | MS.gene056198:CDS | 65.0% | |
| TGCCTGGCGAAGATGGCCGG+AGG | - | chr8.1:65574214-65574233 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 65573490 | 65575241 | 65573490 | ID=MS.gene056198 |
| chr8.1 | mRNA | 65573490 | 65575241 | 65573490 | ID=MS.gene056198.t1;Parent=MS.gene056198 |
| chr8.1 | exon | 65573490 | 65573562 | 65573490 | ID=MS.gene056198.t1.exon1;Parent=MS.gene056198.t1 |
| chr8.1 | CDS | 65573490 | 65573562 | 65573490 | ID=cds.MS.gene056198.t1;Parent=MS.gene056198.t1 |
| chr8.1 | exon | 65573781 | 65573926 | 65573781 | ID=MS.gene056198.t1.exon2;Parent=MS.gene056198.t1 |
| chr8.1 | CDS | 65573781 | 65573926 | 65573781 | ID=cds.MS.gene056198.t1;Parent=MS.gene056198.t1 |
| chr8.1 | exon | 65574015 | 65574230 | 65574015 | ID=MS.gene056198.t1.exon3;Parent=MS.gene056198.t1 |
| chr8.1 | CDS | 65574015 | 65574230 | 65574015 | ID=cds.MS.gene056198.t1;Parent=MS.gene056198.t1 |
| chr8.1 | exon | 65574402 | 65574614 | 65574402 | ID=MS.gene056198.t1.exon4;Parent=MS.gene056198.t1 |
| chr8.1 | CDS | 65574402 | 65574614 | 65574402 | ID=cds.MS.gene056198.t1;Parent=MS.gene056198.t1 |
| chr8.1 | exon | 65574699 | 65574788 | 65574699 | ID=MS.gene056198.t1.exon5;Parent=MS.gene056198.t1 |
| chr8.1 | CDS | 65574699 | 65574788 | 65574699 | ID=cds.MS.gene056198.t1;Parent=MS.gene056198.t1 |
| chr8.1 | exon | 65575038 | 65575241 | 65575038 | ID=MS.gene056198.t1.exon6;Parent=MS.gene056198.t1 |
| chr8.1 | CDS | 65575038 | 65575241 | 65575038 | ID=cds.MS.gene056198.t1;Parent=MS.gene056198.t1 |
| Gene Sequence |
| Protein sequence |
