Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38223.t1 | XP_012568708.1 | 63.5 | 674 | 134 | 7 | 1 | 666 | 1366 | 1935 | 2.50E-221 | 778.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38223.t1 | A0A1S3DZT9 | 63.5 | 674 | 134 | 7 | 1 | 666 | 1366 | 1935 | 1.8e-221 | 778.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049993 | MS.gene38223 | 0.839897 | 1.20E-57 | -1.69E-46 |
| MS.gene051208 | MS.gene38223 | 0.809817 | 1.57E-50 | -1.69E-46 |
| MS.gene052011 | MS.gene38223 | -0.829921 | 3.93E-55 | -1.69E-46 |
| MS.gene053330 | MS.gene38223 | 0.813855 | 2.07E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene38223 | 0.812169 | 4.85E-51 | -1.69E-46 |
| MS.gene054719 | MS.gene38223 | 0.801771 | 7.69E-49 | -1.69E-46 |
| MS.gene055217 | MS.gene38223 | 0.874688 | 5.55E-68 | -1.69E-46 |
| MS.gene055358 | MS.gene38223 | 0.829712 | 4.42E-55 | -1.69E-46 |
| MS.gene055488 | MS.gene38223 | -0.815395 | 9.45E-52 | -1.69E-46 |
| MS.gene056442 | MS.gene38223 | 0.813628 | 2.32E-51 | -1.69E-46 |
| MS.gene058885 | MS.gene38223 | 0.80505 | 1.61E-49 | -1.69E-46 |
| MS.gene059683 | MS.gene38223 | 0.809994 | 1.44E-50 | -1.69E-46 |
| MS.gene060038 | MS.gene38223 | 0.806979 | 6.32E-50 | -1.69E-46 |
| MS.gene061114 | MS.gene38223 | -0.848527 | 5.79E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38223.t1 | MTR_5g085400 | 49.701 | 334 | 133 | 8 | 4 | 323 | 1294 | 1606 | 9.08e-80 | 277 |
| MS.gene38223.t1 | MTR_5g085400 | 37.662 | 154 | 90 | 3 | 11 | 158 | 981 | 1134 | 2.13e-13 | 74.7 |
| MS.gene38223.t1 | MTR_1g031830 | 32.955 | 440 | 234 | 11 | 1 | 391 | 1153 | 1580 | 7.40e-45 | 173 |
| MS.gene38223.t1 | MTR_3g466750 | 25.727 | 688 | 398 | 22 | 4 | 653 | 1216 | 1828 | 9.37e-43 | 167 |
| MS.gene38223.t1 | MTR_3g062180 | 26.917 | 665 | 398 | 17 | 4 | 649 | 33 | 628 | 1.33e-40 | 157 |
| MS.gene38223.t1 | MTR_3g062140 | 26.395 | 663 | 404 | 16 | 4 | 649 | 1151 | 1746 | 8.42e-40 | 158 |
| MS.gene38223.t1 | MTR_3g063010 | 35.015 | 337 | 186 | 8 | 4 | 326 | 1212 | 1529 | 1.32e-37 | 151 |
| MS.gene38223.t1 | MTR_3g062320 | 33.600 | 375 | 194 | 9 | 4 | 360 | 1021 | 1358 | 1.98e-37 | 150 |
| MS.gene38223.t1 | MTR_3g062230 | 32.031 | 384 | 208 | 11 | 3 | 360 | 163 | 519 | 2.71e-36 | 145 |
| MS.gene38223.t1 | MTR_3g464840 | 27.330 | 633 | 346 | 22 | 27 | 642 | 1142 | 1677 | 5.58e-36 | 146 |
| MS.gene38223.t1 | MTR_3g436180 | 34.091 | 264 | 156 | 6 | 4 | 259 | 26 | 279 | 6.22e-36 | 138 |
| MS.gene38223.t1 | MTR_3g062420 | 33.143 | 350 | 196 | 12 | 3 | 329 | 1219 | 1553 | 2.14e-34 | 141 |
| MS.gene38223.t1 | MTR_3g451150 | 30.400 | 375 | 225 | 9 | 1 | 358 | 1188 | 1543 | 3.18e-34 | 140 |
| MS.gene38223.t1 | MTR_3g452250 | 30.400 | 375 | 225 | 9 | 1 | 358 | 1188 | 1543 | 3.18e-34 | 140 |
| MS.gene38223.t1 | MTR_3g062090 | 27.397 | 511 | 298 | 14 | 26 | 505 | 1220 | 1688 | 2.94e-33 | 137 |
| MS.gene38223.t1 | MTR_3g062090 | 27.767 | 497 | 289 | 13 | 26 | 494 | 1220 | 1674 | 3.16e-33 | 137 |
| MS.gene38223.t1 | MTR_3g464870 | 29.782 | 413 | 250 | 9 | 27 | 420 | 1148 | 1539 | 2.58e-32 | 134 |
| MS.gene38223.t1 | MTR_0257s0040 | 40.462 | 173 | 98 | 2 | 46 | 218 | 1 | 168 | 2.94e-32 | 123 |
| MS.gene38223.t1 | MTR_3g464870 | 30.025 | 403 | 245 | 8 | 27 | 413 | 1148 | 1529 | 3.16e-32 | 134 |
| MS.gene38223.t1 | MTR_3g467660 | 35.268 | 224 | 131 | 4 | 4 | 220 | 79 | 295 | 2.57e-31 | 125 |
| MS.gene38223.t1 | MTR_3g048593 | 37.073 | 205 | 115 | 3 | 29 | 225 | 19 | 217 | 8.08e-30 | 120 |
| MS.gene38223.t1 | MTR_3g464810 | 38.308 | 201 | 112 | 4 | 27 | 218 | 1108 | 1305 | 5.78e-29 | 124 |
| MS.gene38223.t1 | MTR_3g062980 | 31.232 | 349 | 188 | 12 | 4 | 326 | 119 | 441 | 1.29e-28 | 122 |
| MS.gene38223.t1 | MTR_3g062980 | 37.569 | 181 | 96 | 4 | 4 | 178 | 7 | 176 | 4.82e-24 | 107 |
| MS.gene38223.t1 | MTR_3g062340 | 28.755 | 466 | 217 | 17 | 3 | 386 | 1064 | 1496 | 1.45e-28 | 123 |
| MS.gene38223.t1 | MTR_5g092190 | 37.611 | 226 | 118 | 6 | 4 | 212 | 1039 | 1258 | 1.58e-28 | 123 |
| MS.gene38223.t1 | MTR_3g435040 | 29.211 | 380 | 204 | 12 | 30 | 382 | 942 | 1283 | 3.06e-28 | 122 |
| MS.gene38223.t1 | MTR_3g435040 | 29.211 | 380 | 204 | 12 | 30 | 382 | 1159 | 1500 | 3.56e-28 | 122 |
| MS.gene38223.t1 | MTR_3g435040 | 29.211 | 380 | 204 | 12 | 30 | 382 | 1159 | 1500 | 3.60e-28 | 122 |
| MS.gene38223.t1 | MTR_3g435040 | 29.211 | 380 | 204 | 12 | 30 | 382 | 944 | 1285 | 3.78e-28 | 121 |
| MS.gene38223.t1 | MTR_3g435040 | 29.211 | 380 | 204 | 12 | 30 | 382 | 942 | 1283 | 3.95e-28 | 121 |
| MS.gene38223.t1 | MTR_3g435040 | 30.218 | 321 | 168 | 8 | 30 | 332 | 944 | 1226 | 6.81e-28 | 120 |
| MS.gene38223.t1 | MTR_3g435040 | 30.218 | 321 | 168 | 8 | 30 | 332 | 944 | 1226 | 9.17e-28 | 120 |
| MS.gene38223.t1 | MTR_3g464820 | 36.702 | 188 | 102 | 6 | 46 | 227 | 1 | 177 | 2.65e-26 | 106 |
| MS.gene38223.t1 | MTR_3g464950 | 24.118 | 709 | 411 | 21 | 52 | 654 | 1062 | 1749 | 6.80e-25 | 111 |
| MS.gene38223.t1 | MTR_3g466530 | 41.250 | 160 | 85 | 4 | 59 | 218 | 193 | 343 | 1.50e-24 | 109 |
| MS.gene38223.t1 | MTR_7g026240 | 35.556 | 180 | 100 | 5 | 35 | 205 | 7 | 179 | 7.65e-22 | 97.8 |
| MS.gene38223.t1 | MTR_0043s0080 | 40.845 | 142 | 71 | 3 | 85 | 218 | 5 | 141 | 1.95e-20 | 95.9 |
| MS.gene38223.t1 | MTR_0043s0080 | 40.845 | 142 | 71 | 3 | 85 | 218 | 5 | 141 | 1.99e-20 | 95.5 |
| MS.gene38223.t1 | MTR_3g055210 | 37.234 | 188 | 107 | 6 | 36 | 212 | 969 | 1156 | 2.86e-20 | 96.7 |
| MS.gene38223.t1 | MTR_3g435040 | 39.007 | 141 | 79 | 1 | 30 | 163 | 942 | 1082 | 1.81e-19 | 94.0 |
| MS.gene38223.t1 | MTR_3g466610 | 40.299 | 134 | 74 | 2 | 85 | 218 | 3 | 130 | 2.47e-19 | 92.8 |
| MS.gene38223.t1 | MTR_3g053200 | 36.994 | 173 | 101 | 4 | 33 | 197 | 1023 | 1195 | 6.72e-19 | 92.0 |
| MS.gene38223.t1 | MTR_3g466590 | 34.659 | 176 | 95 | 5 | 85 | 245 | 3 | 173 | 2.94e-18 | 89.4 |
| MS.gene38223.t1 | MTR_3g062050 | 37.222 | 180 | 100 | 3 | 47 | 218 | 186 | 360 | 1.34e-17 | 85.9 |
| MS.gene38223.t1 | MTR_8g464870 | 29.885 | 174 | 116 | 3 | 43 | 212 | 1037 | 1208 | 7.67e-17 | 85.5 |
| MS.gene38223.t1 | MTR_3g464920 | 28.525 | 305 | 190 | 9 | 7 | 296 | 1028 | 1319 | 1.47e-16 | 84.7 |
| MS.gene38223.t1 | MTR_3g055230 | 31.553 | 206 | 124 | 7 | 36 | 228 | 1032 | 1233 | 1.55e-15 | 81.3 |
| MS.gene38223.t1 | MTR_3g055230 | 32.632 | 190 | 115 | 6 | 36 | 212 | 1032 | 1221 | 4.33e-15 | 79.7 |
| MS.gene38223.t1 | MTR_3g055230 | 32.632 | 190 | 115 | 6 | 36 | 212 | 1032 | 1221 | 4.75e-15 | 79.7 |
| MS.gene38223.t1 | MTR_5g036460 | 28.718 | 195 | 98 | 6 | 35 | 212 | 1450 | 1620 | 6.39e-12 | 69.7 |
| MS.gene38223.t1 | MTR_1g006975 | 28.743 | 167 | 108 | 2 | 4 | 159 | 902 | 1068 | 3.68e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 118 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGTTTAGCAAGCGCTTTC+AGG | 0.217760 | 5.3:-78489893 | MS.gene38223:CDS |
| TCTTAAGTTGCTACACATTT+GGG | 0.251090 | 5.3:-78491877 | MS.gene38223:CDS |
| ATCTTAAGTTGCTACACATT+TGG | 0.280013 | 5.3:-78491878 | MS.gene38223:CDS |
| TGGAACAGCTCTAAAATAAA+AGG | 0.288464 | 5.3:-78492032 | MS.gene38223:CDS |
| ATCCGGTGAAACAAGCTTTC+TGG | 0.300650 | 5.3:-78490552 | MS.gene38223:CDS |
| AGGGAAATCTACAACTTCTT+TGG | 0.301309 | 5.3:-78491146 | MS.gene38223:CDS |
| TCCCTTGAGAGAAGTTATTC+AGG | 0.311230 | 5.3:+78491499 | None:intergenic |
| GTTGAAGTTAATGAGAGTTT+TGG | 0.312178 | 5.3:+78491435 | None:intergenic |
| TGCTGAGGAGTAACACTAAC+AGG | 0.312902 | 5.3:+78489817 | None:intergenic |
| TGCAGAATTGAGGGCATATA+AGG | 0.328243 | 5.3:-78489998 | MS.gene38223:CDS |
| CATGAAGTTCCCGCGTTAAC+TGG | 0.337627 | 5.3:+78489644 | None:intergenic |
| TACATCTTGAGTTGGTATAA+TGG | 0.337952 | 5.3:+78490905 | None:intergenic |
| TCAAGTTGGGTCAAACTTGA+TGG | 0.362326 | 5.3:-78490197 | MS.gene38223:CDS |
| ATATAAGGACTTTGATGATA+TGG | 0.363547 | 5.3:-78489983 | MS.gene38223:CDS |
| TGTGATTTGCAGAATATTGA+TGG | 0.368808 | 5.3:-78490812 | MS.gene38223:intron |
| TAGCTTCATCACATAGTCTA+TGG | 0.373685 | 5.3:+78489782 | None:intergenic |
| ATGATCAAATACTCCAGTTC+AGG | 0.374579 | 5.3:+78491636 | None:intergenic |
| TTGAAGGGTCGTAGAATGTT+TGG | 0.375627 | 5.3:+78491902 | None:intergenic |
| TCAAATACTTTCTCCAGATT+AGG | 0.377194 | 5.3:+78491603 | None:intergenic |
| AAAGTATTTGAATGTCAAAA+AGG | 0.379083 | 5.3:-78491591 | MS.gene38223:CDS |
| TACCAGAGCTGACCTATATA+TGG | 0.380462 | 5.3:-78491932 | MS.gene38223:CDS |
| AGCCGGTGAAACAAGCTTTC+TGG | 0.380647 | 5.3:-78490982 | MS.gene38223:CDS |
| TTTGGCACCCTTCCATATAT+AGG | 0.384335 | 5.3:+78491920 | None:intergenic |
| ACTCACTCCAAGCCTAGTTA+TGG | 0.392178 | 5.3:-78490259 | MS.gene38223:CDS |
| TCGGCTAATACAGAAGATAA+TGG | 0.401947 | 5.3:-78490301 | MS.gene38223:CDS |
| TGTTGGAATCTGTTGCTGTT+TGG | 0.402862 | 5.3:-78492052 | MS.gene38223:CDS |
| CGTTCATTGGAAGTTGATCT+TGG | 0.407313 | 5.3:+78492000 | None:intergenic |
| AAAGTTGTAGATTTCCCTCT+TGG | 0.415577 | 5.3:+78490713 | None:intergenic |
| ACAATTATGCACAAATAGAT+TGG | 0.423604 | 5.3:+78491458 | None:intergenic |
| TTTGACTATTGCAGAATTGA+GGG | 0.426025 | 5.3:-78490007 | MS.gene38223:CDS |
| CTTTGACTATTGCAGAATTG+AGG | 0.426070 | 5.3:-78490008 | MS.gene38223:CDS |
| CATAAATCAAGATCCTAATC+TGG | 0.429048 | 5.3:-78491616 | MS.gene38223:CDS |
| CTGGTAAATTGACCAAGTTC+AGG | 0.431730 | 5.3:+78491949 | None:intergenic |
| AGTTACAGAAGGCGCTTTGT+CGG | 0.435626 | 5.3:-78490320 | MS.gene38223:CDS |
| CGCATTACAGTGTGATGGAT+TGG | 0.436667 | 5.3:-78491784 | MS.gene38223:CDS |
| CTCACTCCAAGCCTAGTTAT+GGG | 0.437054 | 5.3:-78490258 | MS.gene38223:CDS |
| AAAATCAAAACATTTATTCT+GGG | 0.442019 | 5.3:+78489579 | None:intergenic |
| CTGGACCAGCATTGTGAGCT+CGG | 0.442116 | 5.3:-78490533 | MS.gene38223:CDS |
| GTTGCTTGCCGTACGTTCAT+TGG | 0.443510 | 5.3:+78491987 | None:intergenic |
| ACGTACGGCAAGCAACTTCA+TGG | 0.446669 | 5.3:-78491980 | MS.gene38223:CDS |
| AACTTGGATTCGACAGGTCA+TGG | 0.449311 | 5.3:-78489756 | MS.gene38223:CDS |
| TGAGAGAAGTTATTCAGGTT+GGG | 0.455274 | 5.3:+78491504 | None:intergenic |
| GCCAGTGCACGTTCCACCTC+AGG | 0.456389 | 5.3:+78489697 | None:intergenic |
| AGTCAAGAAAGCCGCTTTGT+CGG | 0.458199 | 5.3:-78490747 | MS.gene38223:CDS |
| ACCCCACGAGTTTCCTGAAC+TGG | 0.464861 | 5.3:-78491649 | MS.gene38223:CDS |
| AAGTTTAGCAAGCGCTTTCA+GGG | 0.469085 | 5.3:-78489892 | MS.gene38223:CDS |
| TTGTTTCACCGGATGATTGT+TGG | 0.475337 | 5.3:+78490561 | None:intergenic |
| TCCTGAGGTGGAACGTGCAC+TGG | 0.475516 | 5.3:-78489698 | MS.gene38223:CDS |
| GTCCAGAAAGCTTGTTTCAC+CGG | 0.475893 | 5.3:+78490550 | None:intergenic |
| GACAGCATTGAGATTCCTCC+AGG | 0.478697 | 5.3:-78490142 | MS.gene38223:intron |
| GTCCAGAAAGCTTGTTTCAC+CGG | 0.478868 | 5.3:+78490980 | None:intergenic |
| CATGTCCCCATAACTAGGCT+TGG | 0.498120 | 5.3:+78490252 | None:intergenic |
| TTAGCAAGCGCTTTCAGGGT+TGG | 0.499736 | 5.3:-78489888 | MS.gene38223:CDS |
| TTGAGAGAAGTTATTCAGGT+TGG | 0.504707 | 5.3:+78491503 | None:intergenic |
| GCAAGCATGTCCCCATAACT+AGG | 0.505070 | 5.3:+78490247 | None:intergenic |
| TTTCTCCGAGCTCACAATGC+TGG | 0.507382 | 5.3:+78490528 | None:intergenic |
| CTATTCAACTTGGATTCGAC+AGG | 0.508123 | 5.3:-78489762 | MS.gene38223:CDS |
| AGTTATGATTCAGAACTAAG+AGG | 0.510622 | 5.3:-78491166 | MS.gene38223:CDS |
| TACATCATGAGTTGGTAGAA+TGG | 0.512003 | 5.3:+78490475 | None:intergenic |
| ATATTACATACATCTTGAGT+TGG | 0.512236 | 5.3:+78490897 | None:intergenic |
| AATATTACATGTTTAAGTTG+TGG | 0.514677 | 5.3:+78491537 | None:intergenic |
| TTCCATATATAGGTCAGCTC+TGG | 0.517020 | 5.3:+78491930 | None:intergenic |
| TTTCTCCGAGCTCACGACTC+TGG | 0.518412 | 5.3:+78490958 | None:intergenic |
| TTGATGATAGTATTCAAGTT+GGG | 0.520900 | 5.3:-78490210 | MS.gene38223:CDS |
| TTTGATTTGCAGAATAGTGA+TGG | 0.525821 | 5.3:-78490385 | MS.gene38223:intron |
| TGTGATGAAGCTATTCAACT+TGG | 0.531917 | 5.3:-78489772 | MS.gene38223:CDS |
| AGCGACTGCAGACGAGAAGA+TGG | 0.537411 | 5.3:+78491836 | None:intergenic |
| GTTGATGATAGTATTCAAGT+TGG | 0.538078 | 5.3:-78490211 | MS.gene38223:CDS |
| ATAAATAAACTTACTTGTGA+AGG | 0.541563 | 5.3:+78490665 | None:intergenic |
| GTTATGATTCAGAACTAAGA+GGG | 0.543373 | 5.3:-78491165 | MS.gene38223:CDS |
| AACTTCAACTACTACTGTTG+AGG | 0.544768 | 5.3:-78491421 | MS.gene38223:CDS |
| ACTTGGATTCGACAGGTCAT+GGG | 0.544820 | 5.3:-78489755 | MS.gene38223:CDS |
| GAACGTGCACTGGCACGTCT+TGG | 0.546750 | 5.3:-78489688 | MS.gene38223:CDS |
| CTGGACCAGAGTCGTGAGCT+CGG | 0.551075 | 5.3:-78490963 | MS.gene38223:CDS |
| TTGGTGGGCCAACAATCATC+CGG | 0.556072 | 5.3:-78490569 | MS.gene38223:CDS |
| ATCAACTTCCAATGAACGTA+CGG | 0.557403 | 5.3:-78491995 | MS.gene38223:CDS |
| GAATATTGATGGCGTAACAA+TGG | 0.559278 | 5.3:-78490801 | MS.gene38223:CDS |
| CTTGAATACTATCATCAACA+TGG | 0.563024 | 5.3:+78490215 | None:intergenic |
| GGGTTGGATGTTGAAAACTT+TGG | 0.571826 | 5.3:-78489872 | MS.gene38223:CDS |
| CTAGGATCTTCAACTGAGGT+AGG | 0.571884 | 5.3:+78491808 | None:intergenic |
| TCACAAACTTTACAAAGATG+AGG | 0.572216 | 5.3:+78489916 | None:intergenic |
| ATGGTTAATAGACCTGAACT+TGG | 0.575246 | 5.3:-78491961 | MS.gene38223:CDS |
| GGGGTGCAGAGAAATAGAAC+AGG | 0.579657 | 5.3:+78491667 | None:intergenic |
| GCAGATTATGCAGATACTCG+TGG | 0.580242 | 5.3:-78490039 | MS.gene38223:intron |
| TGTGAGAGAAGACGATGTGG+AGG | 0.581350 | 5.3:-78491568 | MS.gene38223:CDS |
| ATATTACGTACATCATGAGT+TGG | 0.585266 | 5.3:+78490467 | None:intergenic |
| GTAAATAACCTTACTTGTGA+AGG | 0.586002 | 5.3:+78491103 | None:intergenic |
| CTCCAGTTCAGGAAACTCGT+GGG | 0.586004 | 5.3:+78491647 | None:intergenic |
| AGAGCTGACCTATATATGGA+AGG | 0.590238 | 5.3:-78491928 | MS.gene38223:CDS |
| ACCTGAATAACTTCTCTCAA+GGG | 0.591681 | 5.3:-78491500 | MS.gene38223:CDS |
| AGGTGTGAGAGAAGACGATG+TGG | 0.595456 | 5.3:-78491571 | MS.gene38223:CDS |
| CATCACACTGTAATGCGACT+AGG | 0.596988 | 5.3:+78491790 | None:intergenic |
| AACCTGAATAACTTCTCTCA+AGG | 0.599593 | 5.3:-78491501 | MS.gene38223:CDS |
| CTTAAGTTGCTACACATTTG+GGG | 0.599822 | 5.3:-78491876 | MS.gene38223:CDS |
| ACTCCAGTTCAGGAAACTCG+TGG | 0.601936 | 5.3:+78491646 | None:intergenic |
| GAGCTGACCTATATATGGAA+GGG | 0.604023 | 5.3:-78491927 | MS.gene38223:CDS |
| TTGGTGGTTCAACAATCAGC+CGG | 0.605929 | 5.3:-78490999 | MS.gene38223:CDS |
| GCGTCAACGTGTTATAGTCA+AGG | 0.612915 | 5.3:-78489722 | MS.gene38223:CDS |
| TATAGTCAAGGTTCCTGAGG+TGG | 0.615359 | 5.3:-78489710 | MS.gene38223:CDS |
| CTAGTCGCATTACAGTGTGA+TGG | 0.618087 | 5.3:-78491789 | MS.gene38223:CDS |
| ATGCTGCAGAGTTATAATCA+TGG | 0.621048 | 5.3:-78491396 | MS.gene38223:intron |
| TCACTCCAAGCCTAGTTATG+GGG | 0.628918 | 5.3:-78490257 | MS.gene38223:CDS |
| TTGAATACTATCATCAACAT+GGG | 0.629405 | 5.3:+78490216 | None:intergenic |
| CGGCTAATTCAGAACCAAGA+GGG | 0.631775 | 5.3:-78490727 | MS.gene38223:CDS |
| ACAAGTTTCTATGCTTGCAG+AGG | 0.633205 | 5.3:-78489953 | MS.gene38223:CDS |
| GAATAGTGATGGCATAACAA+AGG | 0.634886 | 5.3:-78490374 | MS.gene38223:CDS |
| ATATTAGACGAAGTTACAGA+AGG | 0.646248 | 5.3:-78490331 | MS.gene38223:CDS |
| AACTTGATGGATGAAGAAAG+TGG | 0.646846 | 5.3:-78490184 | MS.gene38223:CDS |
| AGAGACATGACCAGTTAACG+CGG | 0.663360 | 5.3:-78489654 | MS.gene38223:CDS |
| GCGACTAGGATCTTCAACTG+AGG | 0.666779 | 5.3:+78491804 | None:intergenic |
| TTCTGAATTAGCCGACAAAG+CGG | 0.672482 | 5.3:+78490736 | None:intergenic |
| GGATATTTGAGCAACTTCAG+CGG | 0.673206 | 5.3:+78490496 | None:intergenic |
| TGTTATAGTCAAGGTTCCTG+AGG | 0.674238 | 5.3:-78489713 | MS.gene38223:CDS |
| TCCAGTTCAGGAAACTCGTG+GGG | 0.689474 | 5.3:+78491648 | None:intergenic |
| GAGACATGACCAGTTAACGC+GGG | 0.690125 | 5.3:-78489653 | MS.gene38223:CDS |
| TCGGCTAATTCAGAACCAAG+AGG | 0.697961 | 5.3:-78490728 | MS.gene38223:CDS |
| GCTGAGGAGTAACACTAACA+GGG | 0.703986 | 5.3:+78489818 | None:intergenic |
| GTATGTACAGTAAGTCACAG+CGG | 0.858124 | 5.3:+78491272 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGTAATATTATAAAAAAG+TGG | - | chr5.3:78490748-78490767 | MS.gene38223:CDS | 10.0% |
| !! | AAAAATCAAAACATTTATTC+TGG | + | chr5.3:78492057-78492076 | None:intergenic | 15.0% |
| !! | AAAATCAAAACATTTATTCT+GGG | + | chr5.3:78492056-78492075 | None:intergenic | 15.0% |
| !! | AGAATTAGTATTACTATATA+TGG | + | chr5.3:78491013-78491032 | None:intergenic | 15.0% |
| !! | ATAAATAAACTTACTTGTGA+AGG | + | chr5.3:78490970-78490989 | None:intergenic | 20.0% |
| !! | TATATGTAAGTGGTTTATAA+AGG | + | chr5.3:78490566-78490585 | None:intergenic | 20.0% |
| !!! | AAAGTATTTGAATGTCAAAA+AGG | - | chr5.3:78490041-78490060 | MS.gene38223:intron | 20.0% |
| !!! | AATATTACATGTTTAAGTTG+TGG | + | chr5.3:78490098-78490117 | None:intergenic | 20.0% |
| !!! | TATGATTTTGAATACAAACA+AGG | - | chr5.3:78490424-78490443 | MS.gene38223:intron | 20.0% |
| ! | AATATTCTGCAAATCACAAA+AGG | + | chr5.3:78490818-78490837 | None:intergenic | 25.0% |
| ! | ACAATTATGCACAAATAGAT+TGG | + | chr5.3:78490177-78490196 | None:intergenic | 25.0% |
| ! | AGTATTACTATATATGGAAG+TGG | + | chr5.3:78491007-78491026 | None:intergenic | 25.0% |
| ! | AGTATTGCTATATATGTAAG+TGG | + | chr5.3:78490576-78490595 | None:intergenic | 25.0% |
| ! | ATAAAATACCTTCACAAGTA+AGG | - | chr5.3:78490521-78490540 | MS.gene38223:CDS | 25.0% |
| ! | ATATATGGAAGTGGTTATAA+AGG | + | chr5.3:78490998-78491017 | None:intergenic | 25.0% |
| ! | ATATTACATACATCTTGAGT+TGG | + | chr5.3:78490738-78490757 | None:intergenic | 25.0% |
| ! | TATACATATAGAATGGATCA+TGG | + | chr5.3:78491543-78491562 | None:intergenic | 25.0% |
| ! | TTGAATACTATCATCAACAT+GGG | + | chr5.3:78491419-78491438 | None:intergenic | 25.0% |
| !! | ACATTTTAAATAGAAGTTGG+TGG | - | chr5.3:78491047-78491066 | MS.gene38223:intron | 25.0% |
| !! | AGACATGGATTAATATATAG+TGG | + | chr5.3:78490265-78490284 | None:intergenic | 25.0% |
| !! | ATATAAGGACTTTGATGATA+TGG | - | chr5.3:78491649-78491668 | MS.gene38223:CDS | 25.0% |
| !! | GACATGGATTAATATATAGT+GGG | + | chr5.3:78490264-78490283 | None:intergenic | 25.0% |
| !! | TAGCAACTTAAGATTTTGAA+GGG | + | chr5.3:78489748-78489767 | None:intergenic | 25.0% |
| !! | TCGACATTTTAAATAGAAGT+TGG | - | chr5.3:78491044-78491063 | MS.gene38223:intron | 25.0% |
| !! | TGACATTTTCAAATAGAAGT+TGG | - | chr5.3:78490614-78490633 | MS.gene38223:intron | 25.0% |
| !! | TTGATGATAGTATTCAAGTT+GGG | - | chr5.3:78491422-78491441 | MS.gene38223:CDS | 25.0% |
| !!! | AGAATTTGTTATTTCAGACA+GGG | - | chr5.3:78490321-78490340 | MS.gene38223:CDS | 25.0% |
| !!! | CATTTTAAATAGAAGTTGGT+GGG | - | chr5.3:78491048-78491067 | MS.gene38223:intron | 25.0% |
| !!! | TAGAATTTGTTATTTCAGAC+AGG | - | chr5.3:78490320-78490339 | MS.gene38223:CDS | 25.0% |
| ACAAGAATATAATGCTTACC+TGG | + | chr5.3:78491511-78491530 | None:intergenic | 30.0% | |
| AGTTATGATTCAGAACTAAG+AGG | - | chr5.3:78490466-78490485 | MS.gene38223:intron | 30.0% | |
| ATATTACGTACATCATGAGT+TGG | + | chr5.3:78491168-78491187 | None:intergenic | 30.0% | |
| ATATTAGACGAAGTTACAGA+AGG | - | chr5.3:78491301-78491320 | MS.gene38223:intron | 30.0% | |
| ATCACTATTCTGCAAATCAA+AGG | + | chr5.3:78491248-78491267 | None:intergenic | 30.0% | |
| CATAAATCAAGATCCTAATC+TGG | - | chr5.3:78490016-78490035 | MS.gene38223:CDS | 30.0% | |
| CATAATCTGCTAAAACTTGA+AGG | + | chr5.3:78491583-78491602 | None:intergenic | 30.0% | |
| CGAGGTATATACATATAGAA+TGG | + | chr5.3:78491550-78491569 | None:intergenic | 30.0% | |
| CTTGAATACTATCATCAACA+TGG | + | chr5.3:78491420-78491439 | None:intergenic | 30.0% | |
| GTAAATAACCTTACTTGTGA+AGG | + | chr5.3:78490532-78490551 | None:intergenic | 30.0% | |
| GTTATGATTCAGAACTAAGA+GGG | - | chr5.3:78490467-78490486 | MS.gene38223:intron | 30.0% | |
| TCAAATACTTTCTCCAGATT+AGG | + | chr5.3:78490032-78490051 | None:intergenic | 30.0% | |
| TCACAAACTTTACAAAGATG+AGG | + | chr5.3:78491719-78491738 | None:intergenic | 30.0% | |
| TTTGACTATTGCAGAATTGA+GGG | - | chr5.3:78491625-78491644 | MS.gene38223:CDS | 30.0% | |
| ! | ATCTTAAGTTGCTACACATT+TGG | - | chr5.3:78489754-78489773 | MS.gene38223:CDS | 30.0% |
| ! | CATTTTCAAATAGAAGTTGG+TGG | - | chr5.3:78490617-78490636 | MS.gene38223:intron | 30.0% |
| ! | GTAGCAACTTAAGATTTTGA+AGG | + | chr5.3:78489749-78489768 | None:intergenic | 30.0% |
| ! | GTTGAAGTTAATGAGAGTTT+TGG | + | chr5.3:78490200-78490219 | None:intergenic | 30.0% |
| ! | TAATCCATGTCTTGATGATT+TGG | - | chr5.3:78490273-78490292 | MS.gene38223:CDS | 30.0% |
| ! | TCTTAAGTTGCTACACATTT+GGG | - | chr5.3:78489755-78489774 | MS.gene38223:CDS | 30.0% |
| ! | TGTGATTTGCAGAATATTGA+TGG | - | chr5.3:78490820-78490839 | MS.gene38223:intron | 30.0% |
| ! | TTTTGAATACAAACAAGGTG+TGG | - | chr5.3:78490429-78490448 | MS.gene38223:intron | 30.0% |
| !! | GTTGATGATAGTATTCAAGT+TGG | - | chr5.3:78491421-78491440 | MS.gene38223:CDS | 30.0% |
| !! | TACATCTTGAGTTGGTATAA+TGG | + | chr5.3:78490730-78490749 | None:intergenic | 30.0% |
| !! | TGGAACAGCTCTAAAATAAA+AGG | - | chr5.3:78489600-78489619 | MS.gene38223:CDS | 30.0% |
| !! | TTTGATTTGCAGAATAGTGA+TGG | - | chr5.3:78491247-78491266 | MS.gene38223:CDS | 30.0% |
| !!! | AGGGAAATCTACAACTTTTT+TGG | - | chr5.3:78490924-78490943 | MS.gene38223:CDS | 30.0% |
| !!! | GTGAGTTGTTTTTCAAGTTA+CGG | + | chr5.3:78490785-78490804 | None:intergenic | 30.0% |
| AAAGTTGTAGATTTCCCTCT+TGG | + | chr5.3:78490922-78490941 | None:intergenic | 35.0% | |
| AACCTGAATAACTTCTCTCA+AGG | - | chr5.3:78490131-78490150 | MS.gene38223:intron | 35.0% | |
| AACTTCAACTACTACTGTTG+AGG | - | chr5.3:78490211-78490230 | MS.gene38223:CDS | 35.0% | |
| ACCTGAATAACTTCTCTCAA+GGG | - | chr5.3:78490132-78490151 | MS.gene38223:intron | 35.0% | |
| AGAATATAATGCTTACCTGG+AGG | + | chr5.3:78491508-78491527 | None:intergenic | 35.0% | |
| AGGGAAATCTACAACTTCTT+TGG | - | chr5.3:78490486-78490505 | MS.gene38223:CDS | 35.0% | |
| ATCAACTTCCAATGAACGTA+CGG | - | chr5.3:78489637-78489656 | MS.gene38223:CDS | 35.0% | |
| ATGATCAAATACTCCAGTTC+AGG | + | chr5.3:78489999-78490018 | None:intergenic | 35.0% | |
| ATGCTGCAGAGTTATAATCA+TGG | - | chr5.3:78490236-78490255 | MS.gene38223:CDS | 35.0% | |
| ATGGTTAATAGACCTGAACT+TGG | - | chr5.3:78489671-78489690 | MS.gene38223:CDS | 35.0% | |
| CTTTGACTATTGCAGAATTG+AGG | - | chr5.3:78491624-78491643 | MS.gene38223:CDS | 35.0% | |
| GAATAGTGATGGCATAACAA+AGG | - | chr5.3:78491258-78491277 | MS.gene38223:CDS | 35.0% | |
| GAATTATGAACTTGACGAGA+AGG | + | chr5.3:78490299-78490318 | None:intergenic | 35.0% | |
| TAGCTTCATCACATAGTCTA+TGG | + | chr5.3:78491853-78491872 | None:intergenic | 35.0% | |
| TCGGCTAATACAGAAGATAA+TGG | - | chr5.3:78491331-78491350 | MS.gene38223:intron | 35.0% | |
| TGTGATGAAGCTATTCAACT+TGG | - | chr5.3:78491860-78491879 | MS.gene38223:CDS | 35.0% | |
| TTGAGAGAAGTTATTCAGGT+TGG | + | chr5.3:78490132-78490151 | None:intergenic | 35.0% | |
| TTGGGGTTGTAAAAAACTGA+AGG | - | chr5.3:78489773-78489792 | MS.gene38223:CDS | 35.0% | |
| ! | AACTTGATGGATGAAGAAAG+TGG | - | chr5.3:78491448-78491467 | MS.gene38223:CDS | 35.0% |
| ! | CTTAAGTTGCTACACATTTG+GGG | - | chr5.3:78489756-78489775 | MS.gene38223:CDS | 35.0% |
| ! | TGAGAGAAGTTATTCAGGTT+GGG | + | chr5.3:78490131-78490150 | None:intergenic | 35.0% |
| !! | GAATATTGATGGCGTAACAA+TGG | - | chr5.3:78490831-78490850 | MS.gene38223:intron | 35.0% |
| !! | TACATCATGAGTTGGTAGAA+TGG | + | chr5.3:78491160-78491179 | None:intergenic | 35.0% |
| !! | TTTCAAGTTACGGCTTTGAA+AGG | + | chr5.3:78490775-78490794 | None:intergenic | 35.0% |
| AAGGCCAAATCATCAAGACA+TGG | + | chr5.3:78490280-78490299 | None:intergenic | 40.0% | |
| AAGTTTAGCAAGCGCTTTCA+GGG | - | chr5.3:78491740-78491759 | MS.gene38223:CDS | 40.0% | |
| ACAAGTTTCTATGCTTGCAG+AGG | - | chr5.3:78491679-78491698 | MS.gene38223:CDS | 40.0% | |
| AGAGCTGACCTATATATGGA+AGG | - | chr5.3:78489704-78489723 | MS.gene38223:CDS | 40.0% | |
| CTATTCAACTTGGATTCGAC+AGG | - | chr5.3:78491870-78491889 | MS.gene38223:CDS | 40.0% | |
| CTGGTAAATTGACCAAGTTC+AGG | + | chr5.3:78489686-78489705 | None:intergenic | 40.0% | |
| CTTGAAGGAGTTATAGTACG+AGG | + | chr5.3:78491568-78491587 | None:intergenic | 40.0% | |
| GAGCTGACCTATATATGGAA+GGG | - | chr5.3:78489705-78489724 | MS.gene38223:CDS | 40.0% | |
| GGATATTTGAGCAACTTCAG+CGG | + | chr5.3:78491139-78491158 | None:intergenic | 40.0% | |
| GGGTTGGATGTTGAAAACTT+TGG | - | chr5.3:78491760-78491779 | MS.gene38223:CDS | 40.0% | |
| GTATGTACAGTAAGTCACAG+CGG | + | chr5.3:78490363-78490382 | None:intergenic | 40.0% | |
| TACCAGAGCTGACCTATATA+TGG | - | chr5.3:78489700-78489719 | MS.gene38223:CDS | 40.0% | |
| TCCCTTGAGAGAAGTTATTC+AGG | + | chr5.3:78490136-78490155 | None:intergenic | 40.0% | |
| TGTTATAGTCAAGGTTCCTG+AGG | - | chr5.3:78491919-78491938 | MS.gene38223:CDS | 40.0% | |
| TTCCATATATAGGTCAGCTC+TGG | + | chr5.3:78489705-78489724 | None:intergenic | 40.0% | |
| TTCTGAATTAGCCGACAAAG+CGG | + | chr5.3:78490899-78490918 | None:intergenic | 40.0% | |
| TTGAAGGGTCGTAGAATGTT+TGG | + | chr5.3:78489733-78489752 | None:intergenic | 40.0% | |
| TTGTTTCACCGGATGATTGT+TGG | + | chr5.3:78491074-78491093 | None:intergenic | 40.0% | |
| TTTGGCACCCTTCCATATAT+AGG | + | chr5.3:78489715-78489734 | None:intergenic | 40.0% | |
| ! | CGTTCATTGGAAGTTGATCT+TGG | + | chr5.3:78489635-78489654 | None:intergenic | 40.0% |
| ! | TGCAGAATTGAGGGCATATA+AGG | - | chr5.3:78491634-78491653 | MS.gene38223:CDS | 40.0% |
| ! | TGGAACTTCTTTTCTTGCTG+AGG | + | chr5.3:78491833-78491852 | None:intergenic | 40.0% |
| ! | TGTTGGAATCTGTTGCTGTT+TGG | - | chr5.3:78489580-78489599 | MS.gene38223:CDS | 40.0% |
| !! | TCAAGTTGGGTCAAACTTGA+TGG | - | chr5.3:78491435-78491454 | MS.gene38223:CDS | 40.0% |
| AACTTGGATTCGACAGGTCA+TGG | - | chr5.3:78491876-78491895 | MS.gene38223:CDS | 45.0% | |
| ACTCACTCCAAGCCTAGTTA+TGG | - | chr5.3:78491373-78491392 | MS.gene38223:intron | 45.0% | |
| ACTTGGATTCGACAGGTCAT+GGG | - | chr5.3:78491877-78491896 | MS.gene38223:CDS | 45.0% | |
| AGAGACATGACCAGTTAACG+CGG | - | chr5.3:78491978-78491997 | MS.gene38223:CDS | 45.0% | |
| ATCCGGTGAAACAAGCTTTC+TGG | - | chr5.3:78491080-78491099 | MS.gene38223:intron | 45.0% | |
| CATCACACTGTAATGCGACT+AGG | + | chr5.3:78489845-78489864 | None:intergenic | 45.0% | |
| CGGCTAATTCAGAACCAAGA+GGG | - | chr5.3:78490905-78490924 | MS.gene38223:intron | 45.0% | |
| CTAGGATCTTCAACTGAGGT+AGG | + | chr5.3:78489827-78489846 | None:intergenic | 45.0% | |
| CTAGTCGCATTACAGTGTGA+TGG | - | chr5.3:78489843-78489862 | MS.gene38223:CDS | 45.0% | |
| CTCACTCCAAGCCTAGTTAT+GGG | - | chr5.3:78491374-78491393 | MS.gene38223:intron | 45.0% | |
| GAAGTTTAGCAAGCGCTTTC+AGG | - | chr5.3:78491739-78491758 | MS.gene38223:CDS | 45.0% | |
| GCAGATTATGCAGATACTCG+TGG | - | chr5.3:78491593-78491612 | MS.gene38223:CDS | 45.0% | |
| GCGTCAACGTGTTATAGTCA+AGG | - | chr5.3:78491910-78491929 | MS.gene38223:CDS | 45.0% | |
| GCTGAGGAGTAACACTAACA+GGG | + | chr5.3:78491817-78491836 | None:intergenic | 45.0% | |
| TATAGTCAAGGTTCCTGAGG+TGG | - | chr5.3:78491922-78491941 | MS.gene38223:CDS | 45.0% | |
| TCACTCCAAGCCTAGTTATG+GGG | - | chr5.3:78491375-78491394 | MS.gene38223:intron | 45.0% | |
| TCGGCTAATTCAGAACCAAG+AGG | - | chr5.3:78490904-78490923 | MS.gene38223:intron | 45.0% | |
| TGCTGAGGAGTAACACTAAC+AGG | + | chr5.3:78491818-78491837 | None:intergenic | 45.0% | |
| ! | AGTCAAGAAAGCCGCTTTGT+CGG | - | chr5.3:78490885-78490904 | MS.gene38223:intron | 45.0% |
| ! | GTCCAGAAAGCTTGTTTCAC+CGG | + | chr5.3:78490655-78490674 | None:intergenic | 45.0% |
| ! | TTGGTGGTTCAACAATCAGC+CGG | - | chr5.3:78490633-78490652 | MS.gene38223:intron | 45.0% |
| !! | AGTTACAGAAGGCGCTTTGT+CGG | - | chr5.3:78491312-78491331 | MS.gene38223:intron | 45.0% |
| !! | CGCATTACAGTGTGATGGAT+TGG | - | chr5.3:78489848-78489867 | MS.gene38223:CDS | 45.0% |
| !! | TAATATTATAAAAAAAAAAG+TGG | - | chr5.3:78491182-78491201 | MS.gene38223:CDS | 5.0% |
| ACGTACGGCAAGCAACTTCA+TGG | - | chr5.3:78489652-78489671 | MS.gene38223:CDS | 50.0% | |
| ACTCCAGTTCAGGAAACTCG+TGG | + | chr5.3:78489989-78490008 | None:intergenic | 50.0% | |
| AGCCGGTGAAACAAGCTTTC+TGG | - | chr5.3:78490650-78490669 | MS.gene38223:intron | 50.0% | |
| AGGTGTGAGAGAAGACGATG+TGG | - | chr5.3:78490061-78490080 | MS.gene38223:intron | 50.0% | |
| CATGAAGTTCCCGCGTTAAC+TGG | + | chr5.3:78491991-78492010 | None:intergenic | 50.0% | |
| CATGTCCCCATAACTAGGCT+TGG | + | chr5.3:78491383-78491402 | None:intergenic | 50.0% | |
| CTCCAGTTCAGGAAACTCGT+GGG | + | chr5.3:78489988-78490007 | None:intergenic | 50.0% | |
| GAGACATGACCAGTTAACGC+GGG | - | chr5.3:78491979-78491998 | MS.gene38223:CDS | 50.0% | |
| GCAAGCATGTCCCCATAACT+AGG | + | chr5.3:78491388-78491407 | None:intergenic | 50.0% | |
| GCGACTAGGATCTTCAACTG+AGG | + | chr5.3:78489831-78489850 | None:intergenic | 50.0% | |
| GGGGTGCAGAGAAATAGAAC+AGG | + | chr5.3:78489968-78489987 | None:intergenic | 50.0% | |
| GTTGCTTGCCGTACGTTCAT+TGG | + | chr5.3:78489648-78489667 | None:intergenic | 50.0% | |
| TCCAGTTCAGGAAACTCGTG+GGG | + | chr5.3:78489987-78490006 | None:intergenic | 50.0% | |
| TGTGAGAGAAGACGATGTGG+AGG | - | chr5.3:78490064-78490083 | MS.gene38223:intron | 50.0% | |
| TTAGCAAGCGCTTTCAGGGT+TGG | - | chr5.3:78491744-78491763 | MS.gene38223:CDS | 50.0% | |
| TTTCTCCGAGCTCACAATGC+TGG | + | chr5.3:78491107-78491126 | None:intergenic | 50.0% | |
| ! | GACAGCATTGAGATTCCTCC+AGG | - | chr5.3:78491490-78491509 | MS.gene38223:CDS | 50.0% |
| ! | TTGGTGGGCCAACAATCATC+CGG | - | chr5.3:78491063-78491082 | MS.gene38223:intron | 50.0% |
| ACCCCACGAGTTTCCTGAAC+TGG | - | chr5.3:78489983-78490002 | MS.gene38223:CDS | 55.0% | |
| AGCGACTGCAGACGAGAAGA+TGG | + | chr5.3:78489799-78489818 | None:intergenic | 55.0% | |
| CTGGACCAGCATTGTGAGCT+CGG | - | chr5.3:78491099-78491118 | MS.gene38223:intron | 55.0% | |
| TTTCTCCGAGCTCACGACTC+TGG | + | chr5.3:78490677-78490696 | None:intergenic | 55.0% | |
| CTGGACCAGAGTCGTGAGCT+CGG | - | chr5.3:78490669-78490688 | MS.gene38223:intron | 60.0% | |
| TCCTGAGGTGGAACGTGCAC+TGG | - | chr5.3:78491934-78491953 | MS.gene38223:CDS | 60.0% | |
| ! | GAACGTGCACTGGCACGTCT+TGG | - | chr5.3:78491944-78491963 | MS.gene38223:CDS | 60.0% |
| GCCAGTGCACGTTCCACCTC+AGG | + | chr5.3:78491938-78491957 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 78489573 | 78492081 | 78489573 | ID=MS.gene38223 |
| chr5.3 | mRNA | 78489573 | 78492081 | 78489573 | ID=MS.gene38223.t1;Parent=MS.gene38223 |
| chr5.3 | exon | 78491397 | 78492081 | 78491397 | ID=MS.gene38223.t1.exon1;Parent=MS.gene38223.t1 |
| chr5.3 | CDS | 78491397 | 78492081 | 78491397 | ID=cds.MS.gene38223.t1;Parent=MS.gene38223.t1 |
| chr5.3 | exon | 78491117 | 78491316 | 78491117 | ID=MS.gene38223.t1.exon2;Parent=MS.gene38223.t1 |
| chr5.3 | CDS | 78491117 | 78491316 | 78491117 | ID=cds.MS.gene38223.t1;Parent=MS.gene38223.t1 |
| chr5.3 | exon | 78490908 | 78491024 | 78490908 | ID=MS.gene38223.t1.exon3;Parent=MS.gene38223.t1 |
| chr5.3 | CDS | 78490908 | 78491024 | 78490908 | ID=cds.MS.gene38223.t1;Parent=MS.gene38223.t1 |
| chr5.3 | exon | 78490679 | 78490822 | 78490679 | ID=MS.gene38223.t1.exon4;Parent=MS.gene38223.t1 |
| chr5.3 | CDS | 78490679 | 78490822 | 78490679 | ID=cds.MS.gene38223.t1;Parent=MS.gene38223.t1 |
| chr5.3 | exon | 78490478 | 78490594 | 78490478 | ID=MS.gene38223.t1.exon5;Parent=MS.gene38223.t1 |
| chr5.3 | CDS | 78490478 | 78490594 | 78490478 | ID=cds.MS.gene38223.t1;Parent=MS.gene38223.t1 |
| chr5.3 | exon | 78490143 | 78490395 | 78490143 | ID=MS.gene38223.t1.exon6;Parent=MS.gene38223.t1 |
| chr5.3 | CDS | 78490143 | 78490395 | 78490143 | ID=cds.MS.gene38223.t1;Parent=MS.gene38223.t1 |
| chr5.3 | exon | 78489573 | 78490057 | 78489573 | ID=MS.gene38223.t1.exon7;Parent=MS.gene38223.t1 |
| chr5.3 | CDS | 78489573 | 78490057 | 78489573 | ID=cds.MS.gene38223.t1;Parent=MS.gene38223.t1 |
| Gene Sequence |
| Protein sequence |
