Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38276.t1 | XP_003617845.1 | 97.9 | 430 | 9 | 0 | 1 | 430 | 1 | 430 | 7.30E-238 | 832.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38276.t1 | A5DK49 | 40.0 | 105 | 59 | 2 | 182 | 286 | 177 | 277 | 1.2e-15 | 85.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38276.t1 | G7KEI3 | 97.9 | 430 | 9 | 0 | 1 | 430 | 1 | 430 | 5.2e-238 | 832.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050119 | MS.gene38276 | 0.835987 | 1.22E-56 | -1.69E-46 |
| MS.gene052020 | MS.gene38276 | 0.816838 | 4.50E-52 | -1.69E-46 |
| MS.gene052611 | MS.gene38276 | 0.815639 | 8.34E-52 | -1.69E-46 |
| MS.gene052612 | MS.gene38276 | 0.806332 | 8.66E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene38276 | 0.804026 | 2.63E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene38276 | 0.831065 | 2.06E-55 | -1.69E-46 |
| MS.gene056173 | MS.gene38276 | 0.801801 | 7.59E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene38276 | 0.822058 | 2.90E-53 | -1.69E-46 |
| MS.gene057693 | MS.gene38276 | 0.82114 | 4.73E-53 | -1.69E-46 |
| MS.gene05978 | MS.gene38276 | 0.819677 | 1.02E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38276.t1 | MTR_5g096090 | 97.907 | 430 | 9 | 0 | 1 | 430 | 1 | 430 | 0.0 | 882 |
| MS.gene38276.t1 | MTR_3g007930 | 97.442 | 430 | 11 | 0 | 1 | 430 | 1 | 430 | 0.0 | 876 |
| MS.gene38276.t1 | MTR_3g007930 | 99.298 | 285 | 2 | 0 | 1 | 285 | 1 | 285 | 0.0 | 598 |
| MS.gene38276.t1 | MTR_5g096090 | 98.947 | 285 | 3 | 0 | 1 | 285 | 1 | 285 | 0.0 | 595 |
| MS.gene38276.t1 | MTR_7g033625 | 49.828 | 291 | 137 | 3 | 55 | 336 | 2 | 292 | 1.37e-99 | 301 |
| MS.gene38276.t1 | MTR_6g004780 | 47.386 | 306 | 151 | 4 | 60 | 359 | 15 | 316 | 8.60e-97 | 294 |
| MS.gene38276.t1 | MTR_6g004750 | 36.216 | 185 | 89 | 4 | 155 | 335 | 19 | 178 | 3.50e-30 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38276.t1 | AT4G26620 | 64.286 | 448 | 126 | 11 | 7 | 429 | 5 | 443 | 0.0 | 526 |
| MS.gene38276.t1 | AT5G55900 | 58.469 | 431 | 148 | 9 | 7 | 429 | 5 | 412 | 2.15e-151 | 436 |
| MS.gene38276.t1 | AT5G55900 | 61.538 | 312 | 99 | 5 | 126 | 429 | 10 | 308 | 6.80e-115 | 339 |
| MS.gene38276.t1 | AT3G27570 | 50.877 | 285 | 126 | 7 | 60 | 339 | 17 | 292 | 7.21e-88 | 271 |
| MS.gene38276.t1 | AT5G40510 | 39.353 | 371 | 169 | 7 | 60 | 428 | 15 | 331 | 2.86e-87 | 269 |
| MS.gene38276.t1 | AT3G27570 | 50.877 | 285 | 126 | 7 | 60 | 339 | 56 | 331 | 5.14e-87 | 270 |
| MS.gene38276.t1 | AT5G40510 | 39.353 | 371 | 169 | 7 | 60 | 428 | 51 | 367 | 2.06e-86 | 268 |
Find 104 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACGAACCTTTCAAACTTTC+AGG | 0.135608 | 5.3:-77713505 | None:intergenic |
| GCAGGAAATGTCATTATATT+TGG | 0.179898 | 5.3:+77713679 | MS.gene38276:CDS |
| TTAGCCCGTGCTCGCACATT+GGG | 0.302143 | 5.3:+77713644 | MS.gene38276:CDS |
| TGGGGTTTGTGGACCTGTTT+TGG | 0.325042 | 5.3:+77713567 | MS.gene38276:CDS |
| GGGAGATTATAGACTCATTA+TGG | 0.327019 | 5.3:+77713932 | MS.gene38276:CDS |
| AAACTTCCAGAAGCGCTTCT+TGG | 0.342260 | 5.3:-77711637 | None:intergenic |
| GTGAGCTGCTGCCAAGAAAA+TGG | 0.344854 | 5.3:+77715452 | MS.gene38276:CDS |
| GATGTTGCTGATGTTGAGTT+TGG | 0.346397 | 5.3:+77711688 | MS.gene38276:CDS |
| GACCCTCACATATCGTTAAC+CGG | 0.349668 | 5.3:-77713263 | None:intergenic |
| ATGAAAGAACACCATCGTTC+TGG | 0.355681 | 5.3:-77711660 | None:intergenic |
| TGGCAGCAGCTCACTCCATT+TGG | 0.355874 | 5.3:-77715443 | None:intergenic |
| GTTACAAGAATCCCAGGTTT+TGG | 0.363437 | 5.3:+77711785 | MS.gene38276:CDS |
| AACGATGGTGTTCTTTCATC+TGG | 0.374524 | 5.3:+77711664 | MS.gene38276:CDS |
| ACCGACCCAAGAAGCGCTTC+TGG | 0.375953 | 5.3:+77711631 | MS.gene38276:CDS |
| TTCAAACTTTCAGGTGTTCC+AGG | 0.376030 | 5.3:-77713496 | None:intergenic |
| AACTTCCAGAAGCGCTTCTT+GGG | 0.394619 | 5.3:-77711636 | None:intergenic |
| CTGAATCTATTAACCAAAAC+AGG | 0.401968 | 5.3:-77713580 | None:intergenic |
| ACGGGACTGAAACATCTAAT+GGG | 0.409573 | 5.3:+77713289 | MS.gene38276:CDS |
| AGAGAACTTTGTCGAAAATC+AGG | 0.417139 | 5.3:-77711721 | None:intergenic |
| TTTCGACAAAGTTCTCTTGT+TGG | 0.438399 | 5.3:+77711727 | MS.gene38276:CDS |
| GACGGGACTGAAACATCTAA+TGG | 0.438503 | 5.3:+77713288 | MS.gene38276:CDS |
| TGATGGGATTGTGAATGTTA+AGG | 0.442781 | 5.3:-77711554 | None:intergenic |
| TGACAGCATGGCTTGACGGC+TGG | 0.448113 | 5.3:+77715636 | MS.gene38276:CDS |
| GACAGCATGGCTTGACGGCT+GGG | 0.454014 | 5.3:+77715637 | MS.gene38276:CDS |
| TTCCTGACATGATCAGATAC+AGG | 0.459679 | 5.3:+77713325 | MS.gene38276:CDS |
| AGCAATAACGGTACATCCTC+CGG | 0.464324 | 5.3:-77713889 | None:intergenic |
| GATGGGATTGTGAATGTTAA+GGG | 0.464399 | 5.3:-77711553 | None:intergenic |
| CTGAGTTTGATCGCTTGCCT+AGG | 0.469513 | 5.3:+77711827 | MS.gene38276:CDS |
| AACTCAGCAGCTTCAATCCT+AGG | 0.469774 | 5.3:-77711811 | None:intergenic |
| CTAGAGATCCATTCAGTACA+GGG | 0.475454 | 5.3:-77715397 | None:intergenic |
| ATATTTGGATCAAGCATGAA+TGG | 0.478059 | 5.3:+77713694 | MS.gene38276:CDS |
| TTCAACAACATATCATGAAA+GGG | 0.478501 | 5.3:+77713911 | MS.gene38276:CDS |
| GTTAGCCCGTGCTCGCACAT+TGG | 0.479526 | 5.3:+77713643 | MS.gene38276:CDS |
| TCTAGAGATCCATTCAGTAC+AGG | 0.481178 | 5.3:-77715398 | None:intergenic |
| AAGAATGGAGAGTGGCTACC+TGG | 0.483034 | 5.3:+77713478 | MS.gene38276:CDS |
| AGCAGCTCACTCCATTTGGT+TGG | 0.483781 | 5.3:-77715439 | None:intergenic |
| GGCTTCTGCTGAGTTGCATA+GGG | 0.483816 | 5.3:+77715360 | MS.gene38276:CDS |
| AGGCTTCTGCTGAGTTGCAT+AGG | 0.487626 | 5.3:+77715359 | MS.gene38276:CDS |
| GAAGAAAACCCTGTACTGAA+TGG | 0.488090 | 5.3:+77715389 | MS.gene38276:CDS |
| GATCGCAGATGTGGGGTTTG+TGG | 0.489205 | 5.3:+77713556 | MS.gene38276:CDS |
| TTCTTTGTTACAAGAATCCC+AGG | 0.490693 | 5.3:+77711779 | MS.gene38276:CDS |
| GAAGAAGTTCTTGTGAAGAA+TGG | 0.491498 | 5.3:+77713463 | MS.gene38276:CDS |
| AACCTGTATCTGATCATGTC+AGG | 0.492493 | 5.3:-77713327 | None:intergenic |
| TGTTGTCTGTGCTGCTGTAT+CGG | 0.492568 | 5.3:+77715688 | MS.gene38276:CDS |
| TATTTCCATCAGGGGTCAGA+TGG | 0.493546 | 5.3:+77715298 | MS.gene38276:intron |
| TCTATGACAGCATGGCTTGA+CGG | 0.493884 | 5.3:+77715632 | MS.gene38276:CDS |
| ACGAGCTGCTGCCAACCAAA+TGG | 0.500882 | 5.3:+77715428 | MS.gene38276:CDS |
| TCTCGAATCAACAGCGGGAA+AGG | 0.505074 | 5.3:+77715590 | MS.gene38276:CDS |
| CTTCAACAACATATCATGAA+AGG | 0.512393 | 5.3:+77713910 | MS.gene38276:CDS |
| TGACGCCTGACTCTGACAAA+AGG | 0.522283 | 5.3:-77715483 | None:intergenic |
| TCCAGAAGCGCTTCTTGGGT+CGG | 0.528657 | 5.3:-77711632 | None:intergenic |
| GGATCACGTGATCGCAGATG+TGG | 0.533389 | 5.3:+77713547 | MS.gene38276:CDS |
| ATATGTTGTTGAAGCAATAA+CGG | 0.533696 | 5.3:-77713901 | None:intergenic |
| TAGGAAGAATCATATGAAGA+AGG | 0.535864 | 5.3:+77711873 | MS.gene38276:CDS |
| ATCAGCTGAAAGCTTTGCCT+CGG | 0.537129 | 5.3:-77715540 | None:intergenic |
| ATAGAGTATCATGGTCTACA+AGG | 0.540083 | 5.3:+77713610 | MS.gene38276:CDS |
| AATCCTAGGAGGCCAAAACC+TGG | 0.541943 | 5.3:-77711797 | None:intergenic |
| GCGGGAAAGGAGCTTCATGC+AGG | 0.544343 | 5.3:+77715603 | MS.gene38276:CDS |
| CAGGTATGGATATGTTGCTC+CGG | 0.547551 | 5.3:+77713870 | MS.gene38276:intron |
| TTTATGCTGCTGTTAAAGCT+AGG | 0.548804 | 5.3:+77711854 | MS.gene38276:CDS |
| TCTCTCAAACAAACAATGAT+GGG | 0.550896 | 5.3:+77711505 | None:intergenic |
| GGTGATTGGTGAGGAATGAG+AGG | 0.553624 | 5.3:-77711581 | None:intergenic |
| GAGGAATGAGAGGAAGATGA+TGG | 0.557349 | 5.3:-77711571 | None:intergenic |
| AGGAATGAGAGGAAGATGAT+GGG | 0.558309 | 5.3:-77711570 | None:intergenic |
| TAGCCCGTGCTCGCACATTG+GGG | 0.565186 | 5.3:+77713645 | MS.gene38276:CDS |
| ATTTCCATCAGGGGTCAGAT+GGG | 0.569080 | 5.3:+77715299 | MS.gene38276:intron |
| AGTGTGTCAGAGACGGTGAT+TGG | 0.569202 | 5.3:-77711595 | None:intergenic |
| GATCACGTGATCGCAGATGT+GGG | 0.572702 | 5.3:+77713548 | MS.gene38276:CDS |
| GGAACACCTGAAAGTTTGAA+AGG | 0.573138 | 5.3:+77713499 | MS.gene38276:CDS |
| CGATATGTGAGGGTCATGAC+GGG | 0.576926 | 5.3:+77713271 | MS.gene38276:CDS |
| CTGCTACAAACAATTGACAT+AGG | 0.580547 | 5.3:+77715727 | MS.gene38276:CDS |
| CGGTTTCTCGAATCAACAGC+GGG | 0.584126 | 5.3:+77715585 | MS.gene38276:CDS |
| TTGTCAGAGTCAGGCGTCAG+TGG | 0.586534 | 5.3:+77715487 | MS.gene38276:CDS |
| AGCCCGTGCTCGCACATTGG+GGG | 0.586972 | 5.3:+77713646 | MS.gene38276:CDS |
| TAATAAGATCAGCAAGGCGG+CGG | 0.589393 | 5.3:+77715565 | MS.gene38276:CDS |
| AGGGAAGAAATAGAGTATCA+TGG | 0.590070 | 5.3:+77713601 | MS.gene38276:CDS |
| ATCCTAGGAGGCCAAAACCT+GGG | 0.598991 | 5.3:-77711796 | None:intergenic |
| ACGATATGTGAGGGTCATGA+CGG | 0.605517 | 5.3:+77713270 | MS.gene38276:CDS |
| ACAGCAGCATAAAGCAACCT+AGG | 0.605995 | 5.3:-77711844 | None:intergenic |
| GAAGAATCATATGAAGAAGG+AGG | 0.606834 | 5.3:+77711876 | MS.gene38276:CDS |
| ACCCTCACATATCGTTAACC+GGG | 0.613685 | 5.3:-77713262 | None:intergenic |
| GTATGGATATGTTGCTCCGG+AGG | 0.628869 | 5.3:+77713873 | MS.gene38276:CDS |
| TCTGGAAGTTTCCAGAACGA+TGG | 0.633045 | 5.3:+77711649 | MS.gene38276:CDS |
| AGCATGAATGGAGAAGTCAC+TGG | 0.635287 | 5.3:+77713706 | MS.gene38276:CDS |
| GGTTTCGATCTATGACAGCA+TGG | 0.639546 | 5.3:+77715624 | MS.gene38276:CDS |
| CTCCGATGTCATCGAGACCG+AGG | 0.640492 | 5.3:+77715523 | MS.gene38276:CDS |
| TCAACAACATATCATGAAAG+GGG | 0.643501 | 5.3:+77713912 | MS.gene38276:CDS |
| ACTATCAAGTGTGTCAGAGA+CGG | 0.646005 | 5.3:-77711602 | None:intergenic |
| CGGGACTGAAACATCTAATG+GGG | 0.653982 | 5.3:+77713290 | MS.gene38276:CDS |
| ATGGAGAAGTCACTGGACAC+TGG | 0.656231 | 5.3:+77713713 | MS.gene38276:CDS |
| AAGCGCTTCTTGGGTCGGTG+AGG | 0.656522 | 5.3:-77711627 | None:intergenic |
| GACCCGGTTAACGATATGTG+AGG | 0.656819 | 5.3:+77713260 | MS.gene38276:intron |
| TTCTTGTGAAGAATGGAGAG+TGG | 0.662950 | 5.3:+77713470 | MS.gene38276:CDS |
| ATCACGTGATCGCAGATGTG+GGG | 0.664665 | 5.3:+77713549 | MS.gene38276:CDS |
| TCAGCAGCTTCAATCCTAGG+AGG | 0.668429 | 5.3:-77711808 | None:intergenic |
| TGCCTCGGTCTCGATGACAT+CGG | 0.669399 | 5.3:-77715525 | None:intergenic |
| AAATACAAAAGCAAGAACAA+AGG | 0.675736 | 5.3:+77715339 | MS.gene38276:CDS |
| TGATAATAATAAGATCAGCA+AGG | 0.682577 | 5.3:+77715559 | MS.gene38276:CDS |
| AGATTATAGACTCATTATGG+AGG | 0.687669 | 5.3:+77713935 | MS.gene38276:CDS |
| GCTTCTGCTGAGTTGCATAG+GGG | 0.693692 | 5.3:+77715361 | MS.gene38276:CDS |
| ACCCGGTTAACGATATGTGA+GGG | 0.693772 | 5.3:+77713261 | MS.gene38276:CDS |
| GTCAGAGACGGTGATTGGTG+AGG | 0.699707 | 5.3:-77711590 | None:intergenic |
| GCGGTTTCTCGAATCAACAG+CGG | 0.724966 | 5.3:+77715584 | MS.gene38276:CDS |
| TAATAATAAGATCAGCAAGG+CGG | 0.744569 | 5.3:+77715562 | MS.gene38276:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAAAATTAAGCTTT+TGG | + | chr5.3:77712244-77712263 | MS.gene38276:intron | 10.0% |
| !!! | AAAAAAAAAATTAAGCTTTT+GGG | + | chr5.3:77712245-77712264 | MS.gene38276:intron | 10.0% |
| !!! | GTTTTAACTTTTTAATTTTA+AGG | + | chr5.3:77712089-77712108 | MS.gene38276:intron | 10.0% |
| !!! | TAAAAGTATTGTAATTTTAT+TGG | - | chr5.3:77714840-77714859 | None:intergenic | 10.0% |
| !!! | TAGTTTTAGTTATATTAATA+CGG | + | chr5.3:77714064-77714083 | MS.gene38276:intron | 10.0% |
| !!! | TTTTGGTTTATATTTTTTTT+TGG | + | chr5.3:77712449-77712468 | MS.gene38276:intron | 10.0% |
| !! | AAAATATTTGCATTTCAAAA+AGG | + | chr5.3:77714274-77714293 | MS.gene38276:intron | 15.0% |
| !! | AAATATTTGCATTTCAAAAA+GGG | + | chr5.3:77714275-77714294 | MS.gene38276:intron | 15.0% |
| !! | ACAATTTCAATTTGAAAATA+TGG | - | chr5.3:77714405-77714424 | None:intergenic | 15.0% |
| !! | ATACATATTAAGCAATATAT+TGG | - | chr5.3:77715198-77715217 | None:intergenic | 15.0% |
| !! | ATATTGCTTAATATGTATTT+GGG | + | chr5.3:77715200-77715219 | MS.gene38276:intron | 15.0% |
| !! | GTTCATAATTCATTTAATAA+GGG | + | chr5.3:77714233-77714252 | MS.gene38276:intron | 15.0% |
| !! | TATATTGCTTAATATGTATT+TGG | + | chr5.3:77715199-77715218 | MS.gene38276:intron | 15.0% |
| !!! | ATGTTTTTTTTAATCTGAAT+TGG | + | chr5.3:77714349-77714368 | MS.gene38276:intron | 15.0% |
| !!! | CAAATATTTTCTAAAACTTA+AGG | - | chr5.3:77714264-77714283 | None:intergenic | 15.0% |
| !!! | GTGATTTTTAGATTATTTAT+TGG | + | chr5.3:77712781-77712800 | MS.gene38276:intron | 15.0% |
| !!! | TAATTGTTTTGTGATTTTTT+GGG | + | chr5.3:77712162-77712181 | MS.gene38276:intron | 15.0% |
| !!! | TTCATAACTTGAATTATTTT+TGG | - | chr5.3:77714916-77714935 | None:intergenic | 15.0% |
| !!! | TTGTAAAAAATTAAGCTTTT+GGG | + | chr5.3:77712812-77712831 | MS.gene38276:intron | 15.0% |
| !!! | TTGTAAAAATTTAAGCTTTT+GGG | + | chr5.3:77712000-77712019 | MS.gene38276:intron | 15.0% |
| !! | AATATTTGATTCATTTGTGA+AGG | + | chr5.3:77713369-77713388 | MS.gene38276:intron | 20.0% |
| !! | ATAAATGAATGATATTAGTG+AGG | + | chr5.3:77712294-77712313 | MS.gene38276:intron | 20.0% |
| !! | ATAATCAATATGGTAAACAA+CGG | - | chr5.3:77713816-77713835 | None:intergenic | 20.0% |
| !! | ATATCAGTTGAATAGAATAT+AGG | - | chr5.3:77713847-77713866 | None:intergenic | 20.0% |
| !! | GAGATATATCATAATGAATT+GGG | + | chr5.3:77715050-77715069 | MS.gene38276:intron | 20.0% |
| !! | GGTTCATAATTCATTTAATA+AGG | + | chr5.3:77714232-77714251 | MS.gene38276:intron | 20.0% |
| !! | TCATAATTCTTTATGTTATC+AGG | + | chr5.3:77713968-77713987 | MS.gene38276:intron | 20.0% |
| !! | TCATTCTCTCAAATTATTAT+TGG | + | chr5.3:77714626-77714645 | MS.gene38276:intron | 20.0% |
| !! | TGAGATATATCATAATGAAT+TGG | + | chr5.3:77715049-77715068 | MS.gene38276:intron | 20.0% |
| !!! | CTAATTGTTTTGTGATTTTT+TGG | + | chr5.3:77712161-77712180 | MS.gene38276:intron | 20.0% |
| !!! | CTTGTAAAAAATTAAGCTTT+TGG | + | chr5.3:77712811-77712830 | MS.gene38276:intron | 20.0% |
| !!! | CTTGTAAAAATTTAAGCTTT+TGG | + | chr5.3:77713050-77713069 | MS.gene38276:intron | 20.0% |
| !!! | GTTGTAAAAATTTAAGCTTT+TGG | + | chr5.3:77711999-77712018 | MS.gene38276:intron | 20.0% |
| !!! | TTGTAAAAAAACTAAGCTTT+TGG | + | chr5.3:77712432-77712451 | MS.gene38276:intron | 20.0% |
| !!! | TTGTAAAAATTCAAGCTTTT+TGG | + | chr5.3:77712623-77712642 | MS.gene38276:intron | 20.0% |
| ! | AAAACCTCATTAATTTCAAG+TGG | - | chr5.3:77712497-77712516 | None:intergenic | 25.0% |
| ! | AAATACAAAAGCAAGAACAA+AGG | + | chr5.3:77715339-77715358 | MS.gene38276:CDS | 25.0% |
| ! | AAATATCCATAAGTCAACTT+TGG | + | chr5.3:77714376-77714395 | MS.gene38276:intron | 25.0% |
| ! | ATATGTTGTTGAAGCAATAA+CGG | - | chr5.3:77713904-77713923 | None:intergenic | 25.0% |
| ! | TAATCCACTTGAAATTAATG+AGG | + | chr5.3:77712490-77712509 | MS.gene38276:intron | 25.0% |
| ! | TACAAAGTTGTCAAAAAATG+TGG | + | chr5.3:77714965-77714984 | MS.gene38276:intron | 25.0% |
| ! | TATAATTGTGCTTATGTTAC+TGG | - | chr5.3:77714871-77714890 | None:intergenic | 25.0% |
| ! | TCAAATGTCAAAAGAAAAGT+AGG | + | chr5.3:77714936-77714955 | MS.gene38276:intron | 25.0% |
| ! | TCAAGACTCAAATTGTAATT+CGG | + | chr5.3:77714758-77714777 | MS.gene38276:intron | 25.0% |
| ! | TGATAATAATAAGATCAGCA+AGG | + | chr5.3:77715559-77715578 | MS.gene38276:CDS | 25.0% |
| ! | TTATGAATGAATGATACACT+TGG | + | chr5.3:77712670-77712689 | MS.gene38276:intron | 25.0% |
| ! | TTCAAATTGAAATTGTGTTC+AGG | + | chr5.3:77714409-77714428 | MS.gene38276:intron | 25.0% |
| ! | TTCAACAACATATCATGAAA+GGG | + | chr5.3:77713911-77713930 | MS.gene38276:CDS | 25.0% |
| ! | TTCTTTGAATATTTCCATCA+GGG | + | chr5.3:77715289-77715308 | MS.gene38276:intron | 25.0% |
| ! | TTGACTGCAAAATGTTAATA+TGG | + | chr5.3:77713403-77713422 | MS.gene38276:intron | 25.0% |
| ! | TTGATTGTATTGTGAAAATG+TGG | + | chr5.3:77713190-77713209 | MS.gene38276:intron | 25.0% |
| !! | TAAAACAAAGTACTTATCAC+CGG | + | chr5.3:77714698-77714717 | MS.gene38276:intron | 25.0% |
| !! | TTTTCACAACACATTCAATT+AGG | - | chr5.3:77712745-77712764 | None:intergenic | 25.0% |
| !!! | CTTTTGAGTTAAGAACTATA+TGG | + | chr5.3:77712519-77712538 | MS.gene38276:intron | 25.0% |
| !!! | GTGCTAATTGATTTTTTACA+AGG | + | chr5.3:77712995-77713014 | MS.gene38276:intron | 25.0% |
| !!! | GTGTTGATTTTGTGATTTTT+TGG | + | chr5.3:77711958-77711977 | MS.gene38276:intron | 25.0% |
| !!! | TGATTTTTTACAAGGTTATG+TGG | + | chr5.3:77713003-77713022 | MS.gene38276:intron | 25.0% |
| !!! | TGTTTTGGTTAATAGATTCA+GGG | + | chr5.3:77713582-77713601 | MS.gene38276:CDS | 25.0% |
| !!! | TTGATTTTGTGATTTTTTGG+TGG | + | chr5.3:77711961-77711980 | MS.gene38276:intron | 25.0% |
| AAGTTGTCAAAAAATGTGGT+TGG | + | chr5.3:77714969-77714988 | MS.gene38276:intron | 30.0% | |
| AATGAATCACTACCTAAACT+TGG | - | chr5.3:77715000-77715019 | None:intergenic | 30.0% | |
| AATGAATTGGGATTGTGATT+GGG | + | chr5.3:77715062-77715081 | MS.gene38276:intron | 30.0% | |
| AGATTATAGACTCATTATGG+AGG | + | chr5.3:77713935-77713954 | MS.gene38276:CDS | 30.0% | |
| ATATTTGGATCAAGCATGAA+TGG | + | chr5.3:77713694-77713713 | MS.gene38276:CDS | 30.0% | |
| ATGTAATCAATCCTATGTGT+CGG | - | chr5.3:77714597-77714616 | None:intergenic | 30.0% | |
| ATTGCCAACAAAAAAACTTG+CGG | - | chr5.3:77714513-77714532 | None:intergenic | 30.0% | |
| CAAACAAGTAGCAGTAAAAA+GGG | - | chr5.3:77714325-77714344 | None:intergenic | 30.0% | |
| CAAGACTCAAATTGTAATTC+GGG | + | chr5.3:77714759-77714778 | MS.gene38276:intron | 30.0% | |
| CTGAATCTATTAACCAAAAC+AGG | - | chr5.3:77713583-77713602 | None:intergenic | 30.0% | |
| CTTCAACAACATATCATGAA+AGG | + | chr5.3:77713910-77713929 | MS.gene38276:CDS | 30.0% | |
| CTTCTTTGAATATTTCCATC+AGG | + | chr5.3:77715288-77715307 | MS.gene38276:intron | 30.0% | |
| GAATGATCCACTTAAATTGT+TGG | + | chr5.3:77713100-77713119 | MS.gene38276:intron | 30.0% | |
| GATGTGAAATTAATGCTAGT+TGG | + | chr5.3:77712336-77712355 | MS.gene38276:intron | 30.0% | |
| GCAGGAAATGTCATTATATT+TGG | + | chr5.3:77713679-77713698 | MS.gene38276:CDS | 30.0% | |
| GGTCAGACAAATAATCAATA+TGG | - | chr5.3:77713826-77713845 | None:intergenic | 30.0% | |
| GTGATGAATGAATGAATGAA+TGG | + | chr5.3:77712039-77712058 | MS.gene38276:intron | 30.0% | |
| TAATAATAAGATCAGCAAGG+CGG | + | chr5.3:77715562-77715581 | MS.gene38276:CDS | 30.0% | |
| TAATCCACTTGAAATTTGTG+AGG | + | chr5.3:77712877-77712896 | MS.gene38276:intron | 30.0% | |
| TAATGAATTGGGATTGTGAT+TGG | + | chr5.3:77715061-77715080 | MS.gene38276:intron | 30.0% | |
| TAGGAAGAATCATATGAAGA+AGG | + | chr5.3:77711873-77711892 | MS.gene38276:CDS | 30.0% | |
| TCAAACAAGTAGCAGTAAAA+AGG | - | chr5.3:77714326-77714345 | None:intergenic | 30.0% | |
| TCAACAACATATCATGAAAG+GGG | + | chr5.3:77713912-77713931 | MS.gene38276:CDS | 30.0% | |
| TCTATTCAACTGATATAACC+AGG | + | chr5.3:77713851-77713870 | MS.gene38276:intron | 30.0% | |
| TCTTTGAATATTTCCATCAG+GGG | + | chr5.3:77715290-77715309 | MS.gene38276:intron | 30.0% | |
| TGAATGAATGGAAGAATGAT+AGG | + | chr5.3:77712051-77712070 | MS.gene38276:intron | 30.0% | |
| TTTACAAGGTTATGTGGTTA+TGG | + | chr5.3:77713009-77713028 | MS.gene38276:intron | 30.0% | |
| ! | AAGAATGATAGGTTTGAAGT+TGG | + | chr5.3:77712062-77712081 | MS.gene38276:intron | 30.0% |
| ! | GTGATTTTATCGTGATTGAT+TGG | + | chr5.3:77712592-77712611 | MS.gene38276:intron | 30.0% |
| ! | TGATTTTCTTTGTGAGTCTA+TGG | + | chr5.3:77712390-77712409 | MS.gene38276:intron | 30.0% |
| !! | GAAAATGTGGCAATTGATTT+TGG | + | chr5.3:77713203-77713222 | MS.gene38276:intron | 30.0% |
| !! | GAAGTTCTGAAGAAAATGAA+AGG | + | chr5.3:77714116-77714135 | MS.gene38276:intron | 30.0% |
| !! | TATGTTTTTGTGTGTTCACA+TGG | + | chr5.3:77713526-77713545 | MS.gene38276:CDS | 30.0% |
| !!! | AATTTAAGCTTTTGGGTTGT+TGG | + | chr5.3:77712007-77712026 | MS.gene38276:intron | 30.0% |
| !!! | AGCTTTTGGGTTAAATATTG+TGG | + | chr5.3:77713064-77713083 | MS.gene38276:intron | 30.0% |
| !!! | CTGTTTTGGTTAATAGATTC+AGG | + | chr5.3:77713581-77713600 | MS.gene38276:CDS | 30.0% |
| !!! | CTTTTGGGTTAAATATTGTG+GGG | + | chr5.3:77713066-77713085 | MS.gene38276:intron | 30.0% |
| !!! | GCTTTTGGGTTAAATATTGT+GGG | + | chr5.3:77713065-77713084 | MS.gene38276:intron | 30.0% |
| !!! | TGTGATTTTTTGGGTGTTTA+TGG | + | chr5.3:77712171-77712190 | MS.gene38276:intron | 30.0% |
| !!! | TTTGGGTTGTTTGTTTTGTA+GGG | + | chr5.3:77712829-77712848 | MS.gene38276:intron | 30.0% |
| !!! | TTTTGGGTTGTTTGTTTTGT+AGG | + | chr5.3:77712828-77712847 | MS.gene38276:intron | 30.0% |
| !!! | TTTTGGTTGTTTGTTTTGCA+GGG | + | chr5.3:77712640-77712659 | MS.gene38276:intron | 30.0% |
| !!! | TTTTTGGTTGTTTGTTTTGC+AGG | + | chr5.3:77712639-77712658 | MS.gene38276:intron | 30.0% |
| AAATGAATTATGAACCCTCG+AGG | - | chr5.3:77714228-77714247 | None:intergenic | 35.0% | |
| AATGAAGCACAGACAATCTT+CGG | + | chr5.3:77714530-77714549 | MS.gene38276:intron | 35.0% | |
| ACAAGTTAGAGTATGATCCA+GGG | - | chr5.3:77715256-77715275 | None:intergenic | 35.0% | |
| AGAGAACTTTGTCGAAAATC+AGG | - | chr5.3:77711724-77711743 | None:intergenic | 35.0% | |
| ATACCATCAGCTAAAGACAA+AGG | - | chr5.3:77714456-77714475 | None:intergenic | 35.0% | |
| CAAACCTCACAAATTTCAAG+TGG | - | chr5.3:77712884-77712903 | None:intergenic | 35.0% | |
| CAACTCACGATTCAGAAAAT+AGG | - | chr5.3:77714788-77714807 | None:intergenic | 35.0% | |
| CTGCAAAATGTTAATATGGC+AGG | + | chr5.3:77713407-77713426 | MS.gene38276:intron | 35.0% | |
| CTTGACACCAACAATTTAAG+TGG | - | chr5.3:77713110-77713129 | None:intergenic | 35.0% | |
| GAAGAAGTTCTTGTGAAGAA+TGG | + | chr5.3:77713463-77713482 | MS.gene38276:CDS | 35.0% | |
| GAAGAATCATATGAAGAAGG+AGG | + | chr5.3:77711876-77711895 | MS.gene38276:CDS | 35.0% | |
| GATGGGATTGTGAATGTTAA+GGG | - | chr5.3:77711556-77711575 | None:intergenic | 35.0% | |
| GGGAGATTATAGACTCATTA+TGG | + | chr5.3:77713932-77713951 | MS.gene38276:CDS | 35.0% | |
| GTGATTCATTAGAGTGTATC+AGG | + | chr5.3:77715010-77715029 | MS.gene38276:intron | 35.0% | |
| TACAAGTTAGAGTATGATCC+AGG | - | chr5.3:77715257-77715276 | None:intergenic | 35.0% | |
| TACCATCAGCTAAAGACAAA+GGG | - | chr5.3:77714455-77714474 | None:intergenic | 35.0% | |
| TACCATGGTAGTTGAATTAC+CGG | - | chr5.3:77714720-77714739 | None:intergenic | 35.0% | |
| TACGAACCTTTCAAACTTTC+AGG | - | chr5.3:77713508-77713527 | None:intergenic | 35.0% | |
| TAGCAGTAAAAAGGGCAAAT+AGG | - | chr5.3:77714317-77714336 | None:intergenic | 35.0% | |
| TCAACTGATATAACCAGGTA+TGG | + | chr5.3:77713856-77713875 | MS.gene38276:intron | 35.0% | |
| TCGAATTAAGATACAACTCG+CGG | + | chr5.3:77715153-77715172 | MS.gene38276:intron | 35.0% | |
| TGATGGGATTGTGAATGTTA+AGG | - | chr5.3:77711557-77711576 | None:intergenic | 35.0% | |
| TTAGTAGCAGCTATAAAGCA+CGG | - | chr5.3:77714681-77714700 | None:intergenic | 35.0% | |
| TTCTTTGTTACAAGAATCCC+AGG | + | chr5.3:77711779-77711798 | MS.gene38276:CDS | 35.0% | |
| TTGAGAAGAGTTAACTAGCA+AGG | + | chr5.3:77714146-77714165 | MS.gene38276:intron | 35.0% | |
| TTGCCAACAAAAAAACTTGC+GGG | - | chr5.3:77714512-77714531 | None:intergenic | 35.0% | |
| TTTATGCTGCTGTTAAAGCT+AGG | + | chr5.3:77711854-77711873 | MS.gene38276:CDS | 35.0% | |
| TTTCGACAAAGTTCTCTTGT+TGG | + | chr5.3:77711727-77711746 | MS.gene38276:CDS | 35.0% | |
| ! | AGGAAGAGTTTCCATTTTCT+TGG | - | chr5.3:77715466-77715485 | None:intergenic | 35.0% |
| ! | AGGGAAGAAATAGAGTATCA+TGG | + | chr5.3:77713601-77713620 | MS.gene38276:CDS | 35.0% |
| ! | ATAGAGTATCATGGTCTACA+AGG | + | chr5.3:77713610-77713629 | MS.gene38276:CDS | 35.0% |
| ! | CTGGCATTTTGCTTATTTGT+GGG | + | chr5.3:77714032-77714051 | MS.gene38276:intron | 35.0% |
| ! | GTTTGTTTCTTTACTAGACC+CGG | + | chr5.3:77713244-77713263 | MS.gene38276:intron | 35.0% |
| ! | TGGAAACCAAAGTTGACTTA+TGG | - | chr5.3:77714385-77714404 | None:intergenic | 35.0% |
| !! | AAGAATTTTGATAACCGAGC+AGG | - | chr5.3:77713750-77713769 | None:intergenic | 35.0% |
| !! | CACTTAAATTGTTGGTGTCA+AGG | + | chr5.3:77713108-77713127 | MS.gene38276:intron | 35.0% |
| !!! | GTGATTTTTTGGTGGTTGAT+TGG | + | chr5.3:77711969-77711988 | MS.gene38276:intron | 35.0% |
| !!! | TCAAGGTTTTTTTGATAGCG+AGG | + | chr5.3:77713125-77713144 | MS.gene38276:intron | 35.0% |
| !!! | TTACCCGCAAGTTTTTTTGT+TGG | + | chr5.3:77714506-77714525 | MS.gene38276:intron | 35.0% |
| !!! | TTTTGGGTTGTTGGTTTTCT+GGG | + | chr5.3:77712016-77712035 | MS.gene38276:intron | 35.0% |
| !!! | TTTTGGGTTGTTTGCTTTGT+GGG | + | chr5.3:77712261-77712280 | MS.gene38276:intron | 35.0% |
| AACCTGTATCTGATCATGTC+AGG | - | chr5.3:77713330-77713349 | None:intergenic | 40.0% | |
| AACGATGGTGTTCTTTCATC+TGG | + | chr5.3:77711664-77711683 | MS.gene38276:CDS | 40.0% | |
| AACTACCATGGTATCACTCA+TGG | + | chr5.3:77714727-77714746 | MS.gene38276:intron | 40.0% | |
| AAGATTCTCTCAATCCTCGA+GGG | + | chr5.3:77714211-77714230 | MS.gene38276:intron | 40.0% | |
| ACGGGACTGAAACATCTAAT+GGG | + | chr5.3:77713289-77713308 | MS.gene38276:CDS | 40.0% | |
| ACTATCAAGTGTGTCAGAGA+CGG | - | chr5.3:77711605-77711624 | None:intergenic | 40.0% | |
| AGGAATGAGAGGAAGATGAT+GGG | - | chr5.3:77711573-77711592 | None:intergenic | 40.0% | |
| ATGAAAGAACACCATCGTTC+TGG | - | chr5.3:77711663-77711682 | None:intergenic | 40.0% | |
| CTAGAGATCCATTCAGTACA+GGG | - | chr5.3:77715400-77715419 | None:intergenic | 40.0% | |
| GAAGAAAACCCTGTACTGAA+TGG | + | chr5.3:77715389-77715408 | MS.gene38276:CDS | 40.0% | |
| GATGTTGCTGATGTTGAGTT+TGG | + | chr5.3:77711688-77711707 | MS.gene38276:CDS | 40.0% | |
| GCATTTCAAAAAGGGTCTCT+TGG | + | chr5.3:77714283-77714302 | MS.gene38276:intron | 40.0% | |
| GGAACACCTGAAAGTTTGAA+AGG | + | chr5.3:77713499-77713518 | MS.gene38276:CDS | 40.0% | |
| GGGTGTTTATGGTGATTGAT+TGG | + | chr5.3:77712182-77712201 | MS.gene38276:intron | 40.0% | |
| GTGAGTCTATGGTGATTGAT+TGG | + | chr5.3:77712401-77712420 | MS.gene38276:intron | 40.0% | |
| TACCCTTTGTCTTTAGCTGA+TGG | + | chr5.3:77714450-77714469 | MS.gene38276:intron | 40.0% | |
| TATTGTCGATCATATGTCCC+TGG | + | chr5.3:77715236-77715255 | MS.gene38276:intron | 40.0% | |
| TCAGCTAAAGACAAAGGGTA+CGG | - | chr5.3:77714450-77714469 | None:intergenic | 40.0% | |
| TCTAGAGATCCATTCAGTAC+AGG | - | chr5.3:77715401-77715420 | None:intergenic | 40.0% | |
| TGGTAAGGATAAAACCTGCT+CGG | + | chr5.3:77713733-77713752 | MS.gene38276:intron | 40.0% | |
| TTCCTGACATGATCAGATAC+AGG | + | chr5.3:77713325-77713344 | MS.gene38276:CDS | 40.0% | |
| TTCTTGTGAAGAATGGAGAG+TGG | + | chr5.3:77713470-77713489 | MS.gene38276:CDS | 40.0% | |
| TTGCGGGTAAGTAATGCATA+TGG | - | chr5.3:77714496-77714515 | None:intergenic | 40.0% | |
| ! | GCTGGCATTTTGCTTATTTG+TGG | + | chr5.3:77714031-77714050 | MS.gene38276:intron | 40.0% |
| ! | GTTACAAGAATCCCAGGTTT+TGG | + | chr5.3:77711785-77711804 | MS.gene38276:CDS | 40.0% |
| ! | TTCAAACTTTCAGGTGTTCC+AGG | - | chr5.3:77713499-77713518 | None:intergenic | 40.0% |
| !! | TGATAGGTTTGAAGTTGGTG+AGG | + | chr5.3:77712067-77712086 | MS.gene38276:intron | 40.0% |
| !! | TTTGGGTTGTTTGCTTTGTG+GGG | + | chr5.3:77712262-77712281 | MS.gene38276:intron | 40.0% |
| !!! | CTTTTGGGTTGTTGGTTTTC+TGG | + | chr5.3:77712015-77712034 | MS.gene38276:intron | 40.0% |
| !!! | CTTTTGGGTTGTTTGCTTTG+TGG | + | chr5.3:77712260-77712279 | MS.gene38276:intron | 40.0% |
| !!! | TTTGGGTTGTTGGTTTTCTG+GGG | + | chr5.3:77712017-77712036 | MS.gene38276:intron | 40.0% |
| AACTCAGCAGCTTCAATCCT+AGG | - | chr5.3:77711814-77711833 | None:intergenic | 45.0% | |
| ACAGCAGCATAAAGCAACCT+AGG | - | chr5.3:77711847-77711866 | None:intergenic | 45.0% | |
| ACCCGGTTAACGATATGTGA+GGG | + | chr5.3:77713261-77713280 | MS.gene38276:CDS | 45.0% | |
| ACCCTCACATATCGTTAACC+GGG | - | chr5.3:77713265-77713284 | None:intergenic | 45.0% | |
| ACGATATGTGAGGGTCATGA+CGG | + | chr5.3:77713270-77713289 | MS.gene38276:CDS | 45.0% | |
| AGCAATAACGGTACATCCTC+CGG | - | chr5.3:77713892-77713911 | None:intergenic | 45.0% | |
| AGCATGAATGGAGAAGTCAC+TGG | + | chr5.3:77713706-77713725 | MS.gene38276:CDS | 45.0% | |
| ATCAGCTGAAAGCTTTGCCT+CGG | - | chr5.3:77715543-77715562 | None:intergenic | 45.0% | |
| ATTGGGGGACATAAGTATGC+AGG | + | chr5.3:77713661-77713680 | MS.gene38276:CDS | 45.0% | |
| ATTTCCATCAGGGGTCAGAT+GGG | + | chr5.3:77715299-77715318 | MS.gene38276:intron | 45.0% | |
| CAAGATTCTCTCAATCCTCG+AGG | + | chr5.3:77714210-77714229 | MS.gene38276:intron | 45.0% | |
| CACAGACAATCTTCGGAGTA+GGG | + | chr5.3:77714537-77714556 | MS.gene38276:intron | 45.0% | |
| CACCGGTAATTCAACTACCA+TGG | + | chr5.3:77714715-77714734 | MS.gene38276:intron | 45.0% | |
| CAGGTATGGATATGTTGCTC+CGG | + | chr5.3:77713870-77713889 | MS.gene38276:intron | 45.0% | |
| CATCCTCTAAATGACACACC+TGG | + | chr5.3:77713996-77714015 | MS.gene38276:intron | 45.0% | |
| CGGGACTGAAACATCTAATG+GGG | + | chr5.3:77713290-77713309 | MS.gene38276:CDS | 45.0% | |
| GACCCTCACATATCGTTAAC+CGG | - | chr5.3:77713266-77713285 | None:intergenic | 45.0% | |
| GACGGGACTGAAACATCTAA+TGG | + | chr5.3:77713288-77713307 | MS.gene38276:CDS | 45.0% | |
| GAGGAATGAGAGGAAGATGA+TGG | - | chr5.3:77711574-77711593 | None:intergenic | 45.0% | |
| GATGACCATGAGTGATACCA+TGG | - | chr5.3:77714735-77714754 | None:intergenic | 45.0% | |
| GGTTTCGATCTATGACAGCA+TGG | + | chr5.3:77715624-77715643 | MS.gene38276:CDS | 45.0% | |
| TAAGATACAACTCGCGGCAT+CGG | + | chr5.3:77715159-77715178 | MS.gene38276:intron | 45.0% | |
| TAATAAGATCAGCAAGGCGG+CGG | + | chr5.3:77715565-77715584 | MS.gene38276:CDS | 45.0% | |
| TATTTCCATCAGGGGTCAGA+TGG | + | chr5.3:77715298-77715317 | MS.gene38276:intron | 45.0% | |
| TCTATGACAGCATGGCTTGA+CGG | + | chr5.3:77715632-77715651 | MS.gene38276:CDS | 45.0% | |
| TCTGGAAGTTTCCAGAACGA+TGG | + | chr5.3:77711649-77711668 | MS.gene38276:CDS | 45.0% | |
| TGTTCAGGCAACAACTGTCA+TGG | + | chr5.3:77714424-77714443 | MS.gene38276:intron | 45.0% | |
| ! | CTCTTCCTTTTGTCAGAGTC+AGG | + | chr5.3:77715478-77715497 | MS.gene38276:CDS | 45.0% |
| ! | TGGTTGGCTACACCAAGTTT+AGG | + | chr5.3:77714985-77715004 | MS.gene38276:intron | 45.0% |
| ! | TGTTGTCTGTGCTGCTGTAT+CGG | + | chr5.3:77715688-77715707 | MS.gene38276:CDS | 45.0% |
| !! | AAACTTCCAGAAGCGCTTCT+TGG | - | chr5.3:77711640-77711659 | None:intergenic | 45.0% |
| !! | AACTTCCAGAAGCGCTTCTT+GGG | - | chr5.3:77711639-77711658 | None:intergenic | 45.0% |
| AAAATGCCAGCAGCAGAGAG+CGG | - | chr5.3:77714022-77714041 | None:intergenic | 50.0% | |
| AAGAATGGAGAGTGGCTACC+TGG | + | chr5.3:77713478-77713497 | MS.gene38276:CDS | 50.0% | |
| AATCCTAGGAGGCCAAAACC+TGG | - | chr5.3:77711800-77711819 | None:intergenic | 50.0% | |
| AGCAGCTATAAAGCACGGAC+AGG | - | chr5.3:77714676-77714695 | None:intergenic | 50.0% | |
| AGCAGCTCACTCCATTTGGT+TGG | - | chr5.3:77715442-77715461 | None:intergenic | 50.0% | |
| AGGCTTCTGCTGAGTTGCAT+AGG | + | chr5.3:77715359-77715378 | MS.gene38276:CDS | 50.0% | |
| AGTGTGTCAGAGACGGTGAT+TGG | - | chr5.3:77711598-77711617 | None:intergenic | 50.0% | |
| ATCACGTGATCGCAGATGTG+GGG | + | chr5.3:77713549-77713568 | MS.gene38276:CDS | 50.0% | |
| ATCCTAGGAGGCCAAAACCT+GGG | - | chr5.3:77711799-77711818 | None:intergenic | 50.0% | |
| ATGGAGAAGTCACTGGACAC+TGG | + | chr5.3:77713713-77713732 | MS.gene38276:CDS | 50.0% | |
| CGATATGTGAGGGTCATGAC+GGG | + | chr5.3:77713271-77713290 | MS.gene38276:CDS | 50.0% | |
| CGGAGCAACATATCCATACC+TGG | - | chr5.3:77713872-77713891 | None:intergenic | 50.0% | |
| CGGTTTCTCGAATCAACAGC+GGG | + | chr5.3:77715585-77715604 | MS.gene38276:CDS | 50.0% | |
| CTGAGTTTGATCGCTTGCCT+AGG | + | chr5.3:77711827-77711846 | MS.gene38276:CDS | 50.0% | |
| GAAGTCACTGGACACTGGTA+AGG | + | chr5.3:77713718-77713737 | MS.gene38276:intron | 50.0% | |
| GACCCGGTTAACGATATGTG+AGG | + | chr5.3:77713260-77713279 | MS.gene38276:intron | 50.0% | |
| GATCACGTGATCGCAGATGT+GGG | + | chr5.3:77713548-77713567 | MS.gene38276:CDS | 50.0% | |
| GCACAGACAATCTTCGGAGT+AGG | + | chr5.3:77714536-77714555 | MS.gene38276:intron | 50.0% | |
| GCAGCTATAAAGCACGGACA+GGG | - | chr5.3:77714675-77714694 | None:intergenic | 50.0% | |
| GCGGTTTCTCGAATCAACAG+CGG | + | chr5.3:77715584-77715603 | MS.gene38276:CDS | 50.0% | |
| GCTTCTGCTGAGTTGCATAG+GGG | + | chr5.3:77715361-77715380 | MS.gene38276:CDS | 50.0% | |
| GGCTTCTGCTGAGTTGCATA+GGG | + | chr5.3:77715360-77715379 | MS.gene38276:CDS | 50.0% | |
| GGTGATTGGTGAGGAATGAG+AGG | - | chr5.3:77711584-77711603 | None:intergenic | 50.0% | |
| GTATGGATATGTTGCTCCGG+AGG | + | chr5.3:77713873-77713892 | MS.gene38276:CDS | 50.0% | |
| GTGAGCTGCTGCCAAGAAAA+TGG | + | chr5.3:77715452-77715471 | MS.gene38276:CDS | 50.0% | |
| TAATCCCATCTGACCCCTGA+TGG | - | chr5.3:77715306-77715325 | None:intergenic | 50.0% | |
| TCAGCAGCTTCAATCCTAGG+AGG | - | chr5.3:77711811-77711830 | None:intergenic | 50.0% | |
| TCTCGAATCAACAGCGGGAA+AGG | + | chr5.3:77715590-77715609 | MS.gene38276:CDS | 50.0% | |
| TGACGCCTGACTCTGACAAA+AGG | - | chr5.3:77715486-77715505 | None:intergenic | 50.0% | |
| ! | TGGGGTTTGTGGACCTGTTT+TGG | + | chr5.3:77713567-77713586 | MS.gene38276:CDS | 50.0% |
| !! | TGGTGTCGACATGTCGTGTT+CGG | + | chr5.3:77714646-77714665 | MS.gene38276:intron | 50.0% |
| ACGAGCTGCTGCCAACCAAA+TGG | + | chr5.3:77715428-77715447 | MS.gene38276:CDS | 55.0% | |
| GATCGCAGATGTGGGGTTTG+TGG | + | chr5.3:77713556-77713575 | MS.gene38276:CDS | 55.0% | |
| GGATCACGTGATCGCAGATG+TGG | + | chr5.3:77713547-77713566 | MS.gene38276:CDS | 55.0% | |
| GGTGTCTGACACCGACACAT+AGG | + | chr5.3:77714583-77714602 | MS.gene38276:intron | 55.0% | |
| GTCAGAGACGGTGATTGGTG+AGG | - | chr5.3:77711593-77711612 | None:intergenic | 55.0% | |
| TGCCTCGGTCTCGATGACAT+CGG | - | chr5.3:77715528-77715547 | None:intergenic | 55.0% | |
| TGGCAGCAGCTCACTCCATT+TGG | - | chr5.3:77715446-77715465 | None:intergenic | 55.0% | |
| TTAGCCCGTGCTCGCACATT+GGG | + | chr5.3:77713644-77713663 | MS.gene38276:CDS | 55.0% | |
| TTGTCAGAGTCAGGCGTCAG+TGG | + | chr5.3:77715487-77715506 | MS.gene38276:CDS | 55.0% | |
| ! | ATCTTCGGAGTAGGGTGTCC+CGG | + | chr5.3:77714545-77714564 | MS.gene38276:intron | 55.0% |
| !! | ATCCCAGGTTTTGGCCTCCT+AGG | + | chr5.3:77711794-77711813 | MS.gene38276:CDS | 55.0% |
| !! | CGGCCAGGTGTGTCATTTAG+AGG | - | chr5.3:77714002-77714021 | None:intergenic | 55.0% |
| !! | TCCAGAAGCGCTTCTTGGGT+CGG | - | chr5.3:77711635-77711654 | None:intergenic | 55.0% |
| AAGCGCTTCTTGGGTCGGTG+AGG | - | chr5.3:77711630-77711649 | None:intergenic | 60.0% | |
| CTCCGATGTCATCGAGACCG+AGG | + | chr5.3:77715523-77715542 | MS.gene38276:CDS | 60.0% | |
| GACAGCATGGCTTGACGGCT+GGG | + | chr5.3:77715637-77715656 | MS.gene38276:CDS | 60.0% | |
| GCGGGAAAGGAGCTTCATGC+AGG | + | chr5.3:77715603-77715622 | MS.gene38276:CDS | 60.0% | |
| GTTAGCCCGTGCTCGCACAT+TGG | + | chr5.3:77713643-77713662 | MS.gene38276:CDS | 60.0% | |
| TAGCCCGTGCTCGCACATTG+GGG | + | chr5.3:77713645-77713664 | MS.gene38276:CDS | 60.0% | |
| TGACAGCATGGCTTGACGGC+TGG | + | chr5.3:77715636-77715655 | MS.gene38276:CDS | 60.0% | |
| TGTCCCCCAATGTGCGAGCA+CGG | - | chr5.3:77713652-77713671 | None:intergenic | 60.0% | |
| !! | ACCGACCCAAGAAGCGCTTC+TGG | + | chr5.3:77711631-77711650 | MS.gene38276:CDS | 60.0% |
| ACCGACGCGTGTCCAACACC+GGG | - | chr5.3:77714566-77714585 | None:intergenic | 65.0% | |
| AGCCCGTGCTCGCACATTGG+GGG | + | chr5.3:77713646-77713665 | MS.gene38276:CDS | 65.0% | |
| CACCGACGCGTGTCCAACAC+CGG | - | chr5.3:77714567-77714586 | None:intergenic | 65.0% | |
| GTCCCCCAATGTGCGAGCAC+GGG | - | chr5.3:77713651-77713670 | None:intergenic | 65.0% | |
| ! | GGAGTAGGGTGTCCCGGTGT+TGG | + | chr5.3:77714551-77714570 | MS.gene38276:intron | 65.0% |
| ! | TCCCGGTGTTGGACACGCGT+CGG | + | chr5.3:77714562-77714581 | MS.gene38276:intron | 65.0% |
| ACCTGGCCGCTCTCTGCTGC+TGG | + | chr5.3:77714013-77714032 | MS.gene38276:intron | 70.0% | |
| GCCAGCAGCAGAGAGCGGCC+AGG | - | chr5.3:77714017-77714036 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 77711520 | 77715748 | 77711520 | ID=MS.gene38276 |
| chr5.3 | mRNA | 77711520 | 77715748 | 77711520 | ID=MS.gene38276.t1;Parent=MS.gene38276 |
| chr5.3 | exon | 77711520 | 77711897 | 77711520 | ID=MS.gene38276.t1.exon1;Parent=MS.gene38276.t1 |
| chr5.3 | CDS | 77711520 | 77711897 | 77711520 | ID=cds.MS.gene38276.t1;Parent=MS.gene38276.t1 |
| chr5.3 | exon | 77713261 | 77713346 | 77713261 | ID=MS.gene38276.t1.exon2;Parent=MS.gene38276.t1 |
| chr5.3 | CDS | 77713261 | 77713346 | 77713261 | ID=cds.MS.gene38276.t1;Parent=MS.gene38276.t1 |
| chr5.3 | exon | 77713429 | 77713734 | 77713429 | ID=MS.gene38276.t1.exon3;Parent=MS.gene38276.t1 |
| chr5.3 | CDS | 77713429 | 77713734 | 77713429 | ID=cds.MS.gene38276.t1;Parent=MS.gene38276.t1 |
| chr5.3 | exon | 77713873 | 77713956 | 77713873 | ID=MS.gene38276.t1.exon4;Parent=MS.gene38276.t1 |
| chr5.3 | CDS | 77713873 | 77713956 | 77713873 | ID=cds.MS.gene38276.t1;Parent=MS.gene38276.t1 |
| chr5.3 | exon | 77715310 | 77715748 | 77715310 | ID=MS.gene38276.t1.exon5;Parent=MS.gene38276.t1 |
| chr5.3 | CDS | 77715310 | 77715748 | 77715310 | ID=cds.MS.gene38276.t1;Parent=MS.gene38276.t1 |
| Gene Sequence |
| Protein sequence |
