Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054994.t1 | XP_024625892.1 | 97.2 | 690 | 19 | 0 | 1 | 690 | 1 | 690 | 0.00E+00 | 1311.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054994.t1 | O60942 | 35.3 | 592 | 329 | 17 | 96 | 665 | 4 | 563 | 3.6e-78 | 294.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054994.t1 | A0A072U100 | 97.2 | 690 | 19 | 0 | 1 | 690 | 1 | 690 | 0.0e+00 | 1311.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene054994 | 0.828369 | 9.34E-55 | -1.69E-46 |
| MS.gene052954 | MS.gene054994 | 0.813028 | 3.15E-51 | -1.69E-46 |
| MS.gene053006 | MS.gene054994 | 0.808252 | 3.39E-50 | -1.69E-46 |
| MS.gene053008 | MS.gene054994 | 0.835882 | 1.30E-56 | -1.69E-46 |
| MS.gene053080 | MS.gene054994 | 0.805012 | 1.64E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene054994 | 0.80245 | 5.58E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene054994 | 0.807337 | 5.31E-50 | -1.69E-46 |
| MS.gene053931 | MS.gene054994 | 0.809081 | 2.26E-50 | -1.69E-46 |
| MS.gene053960 | MS.gene054994 | 0.803312 | 3.70E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene054994 | 0.810009 | 1.43E-50 | -1.69E-46 |
| MS.gene054657 | MS.gene054994 | 0.816179 | 6.32E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene055222 | 0.809096 | 2.24E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene055818 | 0.821307 | 4.33E-53 | -1.69E-46 |
| MS.gene054994 | MS.gene055841 | 0.819369 | 1.20E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene057060 | 0.812123 | 4.97E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene057208 | 0.822423 | 2.39E-53 | -1.69E-46 |
| MS.gene054994 | MS.gene057392 | 0.831703 | 1.44E-55 | -1.69E-46 |
| MS.gene054994 | MS.gene057598 | 0.804449 | 2.15E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene057693 | 0.855748 | 5.12E-62 | -1.69E-46 |
| MS.gene054994 | MS.gene057855 | 0.809462 | 1.87E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene057869 | 0.810788 | 9.69E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene058548 | 0.818398 | 2.00E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene058595 | 0.81369 | 2.25E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene058783 | 0.804422 | 2.18E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene058979 | 0.831169 | 1.94E-55 | -1.69E-46 |
| MS.gene054994 | MS.gene05979 | 0.806192 | 9.27E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene060683 | 0.818387 | 2.01E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene060685 | 0.815598 | 8.52E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene060803 | 0.825098 | 5.64E-54 | -1.69E-46 |
| MS.gene054994 | MS.gene061980 | 0.801355 | 9.37E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene063407 | 0.827838 | 1.25E-54 | -1.69E-46 |
| MS.gene054994 | MS.gene063491 | 0.838749 | 2.39E-57 | -1.69E-46 |
| MS.gene054994 | MS.gene065559 | 0.812743 | 3.64E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene065711 | -0.800358 | 1.50E-48 | -1.69E-46 |
| MS.gene054994 | MS.gene066264 | 0.807286 | 5.44E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene066320 | 0.804735 | 1.87E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene06643 | 0.820447 | 6.83E-53 | -1.69E-46 |
| MS.gene054994 | MS.gene066745 | 0.805383 | 1.37E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene067173 | 0.850411 | 1.73E-60 | -1.69E-46 |
| MS.gene054994 | MS.gene06723 | 0.84535 | 4.29E-59 | -1.69E-46 |
| MS.gene054994 | MS.gene067635 | 0.800309 | 1.53E-48 | -1.69E-46 |
| MS.gene054994 | MS.gene068526 | 0.841629 | 4.23E-58 | -1.69E-46 |
| MS.gene054994 | MS.gene06857 | 0.830681 | 2.56E-55 | -1.69E-46 |
| MS.gene054994 | MS.gene068777 | 0.808004 | 3.83E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene06940 | 0.836066 | 1.16E-56 | -1.69E-46 |
| MS.gene054994 | MS.gene069519 | 0.806914 | 6.53E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene072942 | 0.811812 | 5.81E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene073008 | 0.843088 | 1.74E-58 | -1.69E-46 |
| MS.gene054994 | MS.gene073016 | -0.819147 | 1.35E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene073753 | 0.802346 | 5.86E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene073853 | 0.83857 | 2.66E-57 | -1.69E-46 |
| MS.gene054994 | MS.gene074026 | 0.811088 | 8.34E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene074184 | -0.802897 | 4.51E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene074606 | 0.810224 | 1.28E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene08189 | 0.800666 | 1.30E-48 | -1.69E-46 |
| MS.gene054994 | MS.gene08319 | 0.803776 | 2.97E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene08806 | 0.812015 | 5.24E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene08853 | 0.801481 | 8.82E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene09283 | 0.80659 | 7.64E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene20809 | 0.816854 | 4.46E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene21562 | 0.822954 | 1.80E-53 | -1.69E-46 |
| MS.gene054994 | MS.gene21676 | 0.822695 | 2.06E-53 | -1.69E-46 |
| MS.gene054994 | MS.gene21886 | 0.812774 | 3.58E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene21927 | 0.810529 | 1.10E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene21929 | 0.801031 | 1.09E-48 | -1.69E-46 |
| MS.gene054994 | MS.gene22271 | 0.803158 | 3.98E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene23304 | 0.82065 | 6.13E-53 | -1.69E-46 |
| MS.gene054994 | MS.gene24067 | 0.829034 | 6.45E-55 | -1.69E-46 |
| MS.gene054994 | MS.gene24356 | 0.806795 | 6.92E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene24628 | 0.803245 | 3.82E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene25992 | 0.808115 | 3.63E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene28709 | 0.827702 | 1.35E-54 | -1.69E-46 |
| MS.gene054994 | MS.gene28864 | 0.809966 | 1.46E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene28944 | 0.81356 | 2.41E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene30970 | 0.817248 | 3.64E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene31142 | 0.828775 | 7.45E-55 | -1.69E-46 |
| MS.gene054994 | MS.gene31283 | 0.800563 | 1.36E-48 | -1.69E-46 |
| MS.gene054994 | MS.gene31397 | 0.80192 | 7.17E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene31503 | 0.823774 | 1.16E-53 | -1.69E-46 |
| MS.gene054994 | MS.gene33468 | 0.812601 | 3.90E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene34071 | 0.805724 | 1.16E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene34233 | 0.807182 | 5.73E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene35121 | 0.824003 | 1.02E-53 | -1.69E-46 |
| MS.gene054994 | MS.gene36453 | 0.835843 | 1.33E-56 | -1.69E-46 |
| MS.gene054994 | MS.gene37725 | 0.811711 | 6.11E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene38276 | 0.804026 | 2.63E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene38287 | 0.801138 | 1.04E-48 | -1.69E-46 |
| MS.gene054994 | MS.gene39882 | 0.806581 | 7.67E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene40381 | -0.806815 | 6.85E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene41103 | -0.804808 | 1.81E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene41121 | 0.813364 | 2.66E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene42170 | 0.808212 | 3.46E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene42564 | 0.804359 | 2.24E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene42645 | 0.811675 | 6.22E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene43430 | 0.817726 | 2.84E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene43973 | 0.803169 | 3.96E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene44510 | 0.813339 | 2.69E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene45507 | 0.800108 | 1.68E-48 | -1.69E-46 |
| MS.gene054994 | MS.gene45567 | 0.805058 | 1.60E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene45641 | 0.824331 | 8.56E-54 | -1.69E-46 |
| MS.gene054994 | MS.gene45933 | 0.857554 | 1.51E-62 | -1.69E-46 |
| MS.gene054994 | MS.gene46128 | 0.816056 | 6.73E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene46250 | 0.800046 | 1.73E-48 | -1.69E-46 |
| MS.gene054994 | MS.gene47050 | 0.807288 | 5.44E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene49426 | 0.806442 | 8.21E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene49940 | 0.8058 | 1.12E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene50177 | 0.80549 | 1.30E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene50250 | 0.802004 | 6.89E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene50639 | 0.804801 | 1.81E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene51650 | 0.804335 | 2.27E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene51788 | 0.819903 | 9.10E-53 | -1.69E-46 |
| MS.gene054994 | MS.gene52448 | 0.801143 | 1.03E-48 | -1.69E-46 |
| MS.gene054994 | MS.gene53182 | 0.814934 | 1.20E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene53579 | 0.824548 | 7.60E-54 | -1.69E-46 |
| MS.gene054994 | MS.gene55396 | 0.803486 | 3.41E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene56227 | 0.803974 | 2.70E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene58278 | 0.808788 | 2.61E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene59215 | 0.816141 | 6.45E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene59949 | 0.821793 | 3.34E-53 | -1.69E-46 |
| MS.gene054994 | MS.gene60566 | 0.834156 | 3.53E-56 | -1.69E-46 |
| MS.gene054994 | MS.gene60631 | 0.806217 | 9.16E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene62393 | 0.825161 | 5.45E-54 | -1.69E-46 |
| MS.gene054994 | MS.gene62892 | 0.8156 | 8.51E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene65291 | 0.818606 | 1.80E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene65895 | 0.813025 | 3.15E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene67007 | 0.833547 | 5.01E-56 | -1.69E-46 |
| MS.gene054994 | MS.gene67346 | 0.913438 | 6.15E-84 | -1.69E-46 |
| MS.gene054994 | MS.gene67662 | 0.840569 | 8.04E-58 | -1.69E-46 |
| MS.gene054994 | MS.gene70657 | 0.80693 | 6.48E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene71871 | 0.819004 | 1.46E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene71935 | 0.804462 | 2.14E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene71937 | 0.80199 | 6.94E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene73820 | 0.842619 | 2.32E-58 | -1.69E-46 |
| MS.gene054994 | MS.gene74444 | 0.811511 | 6.75E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene74674 | 0.801599 | 8.35E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene75003 | 0.815192 | 1.05E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene78492 | 0.809689 | 1.67E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene78547 | 0.816686 | 4.87E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene78951 | 0.803884 | 2.82E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene79285 | 0.828163 | 1.05E-54 | -1.69E-46 |
| MS.gene054994 | MS.gene81121 | 0.825401 | 4.78E-54 | -1.69E-46 |
| MS.gene054994 | MS.gene81900 | 0.823913 | 1.07E-53 | -1.69E-46 |
| MS.gene054994 | MS.gene82805 | 0.829877 | 4.02E-55 | -1.69E-46 |
| MS.gene054994 | MS.gene82879 | 0.819563 | 1.09E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene85663 | 0.839752 | 1.31E-57 | -1.69E-46 |
| MS.gene054994 | MS.gene88148 | 0.809835 | 1.55E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene89340 | 0.806423 | 8.28E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene89344 | 0.830726 | 2.50E-55 | -1.69E-46 |
| MS.gene054994 | MS.gene90585 | 0.826883 | 2.12E-54 | -1.69E-46 |
| MS.gene054994 | MS.gene91907 | 0.832526 | 8.99E-56 | -1.69E-46 |
| MS.gene054994 | MS.gene92068 | 0.805981 | 1.03E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene92383 | 0.804762 | 1.85E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene92579 | 0.800377 | 1.48E-48 | -1.69E-46 |
| MS.gene054994 | MS.gene93311 | 0.818077 | 2.37E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene93764 | 0.813176 | 2.92E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene95096 | 0.827092 | 1.89E-54 | -1.69E-46 |
| MS.gene054994 | MS.gene95255 | 0.801489 | 8.79E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene95625 | 0.806895 | 6.59E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene96073 | 0.831316 | 1.79E-55 | -1.69E-46 |
| MS.gene054994 | MS.gene96210 | 0.826566 | 2.53E-54 | -1.69E-46 |
| MS.gene054994 | MS.gene96287 | 0.818691 | 1.72E-52 | -1.69E-46 |
| MS.gene054994 | MS.gene99835 | 0.803458 | 3.45E-49 | -1.69E-46 |
| MS.gene054994 | MS.gene99887 | 0.803511 | 3.37E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene054994 | MS.gene052776 | PPI |
| MS.gene93389 | MS.gene054994 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054994.t1 | MTR_7g066810 | 97.826 | 690 | 15 | 0 | 1 | 690 | 1 | 690 | 0.0 | 1403 |
| MS.gene054994.t1 | MTR_4g014920 | 79.046 | 692 | 129 | 6 | 1 | 687 | 1 | 681 | 0.0 | 1079 |
| MS.gene054994.t1 | MTR_4g014920 | 79.360 | 688 | 126 | 6 | 5 | 687 | 1 | 677 | 0.0 | 1076 |
| MS.gene054994.t1 | MTR_4g014920 | 78.374 | 652 | 125 | 6 | 1 | 647 | 1 | 641 | 0.0 | 1018 |
| MS.gene054994.t1 | MTR_4g014920 | 80.412 | 582 | 98 | 6 | 1 | 577 | 1 | 571 | 0.0 | 914 |
| MS.gene054994.t1 | MTR_7g094670 | 62.848 | 646 | 218 | 9 | 53 | 690 | 2 | 633 | 0.0 | 819 |
| MS.gene054994.t1 | MTR_7g068260 | 53.205 | 156 | 23 | 2 | 474 | 629 | 29 | 134 | 1.57e-42 | 150 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054994.t1 | AT3G09100 | 66.619 | 695 | 204 | 9 | 1 | 690 | 1 | 672 | 0.0 | 912 |
| MS.gene054994.t1 | AT5G01290 | 63.768 | 690 | 213 | 11 | 5 | 690 | 1 | 657 | 0.0 | 851 |
| MS.gene054994.t1 | AT5G28210 | 56.053 | 603 | 224 | 16 | 98 | 690 | 48 | 619 | 0.0 | 645 |
| MS.gene054994.t1 | AT3G09100 | 64.435 | 478 | 148 | 5 | 1 | 474 | 1 | 460 | 0.0 | 606 |
Find 147 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTCCATCATATGATTTA+AGG | 0.113031 | 7.4:-36848107 | None:intergenic |
| TATATGACATGGAGCCTTTC+AGG | 0.186417 | 7.4:+36853982 | MS.gene054994:CDS |
| CTGCTTTCAGATACTCAAAT+TGG | 0.211849 | 7.4:+36851179 | MS.gene054994:CDS |
| ATGATTTAAGGATCTTATTA+TGG | 0.232235 | 7.4:-36848095 | None:intergenic |
| AATGACAAACGATGATGTTT+TGG | 0.244746 | 7.4:+36851113 | MS.gene054994:CDS |
| TCAGACCCCATGCTTTATTC+TGG | 0.261086 | 7.4:+36855673 | MS.gene054994:CDS |
| ATGGTACCGTTCATGATTCC+TGG | 0.271885 | 7.4:-36853940 | None:intergenic |
| CCACTTTCTATGTGCTCTTC+TGG | 0.283156 | 7.4:-36847085 | None:intergenic |
| TTTCGGCATGATACCTTCTA+AGG | 0.285277 | 7.4:+36848697 | MS.gene054994:CDS |
| CGCAGATGGTCTCATATTTC+AGG | 0.293837 | 7.4:+36854172 | MS.gene054994:CDS |
| CTTGTAAGTATTTAAGTCAT+TGG | 0.300316 | 7.4:-36855773 | None:intergenic |
| GCAGGACAGACTATCGTTTC+AGG | 0.301819 | 7.4:-36850021 | None:intergenic |
| CTTGAATGCCTCTCCTTTGC+CGG | 0.304993 | 7.4:+36846982 | MS.gene054994:CDS |
| TTGGACCTGTCTAAAGAAAC+TGG | 0.317774 | 7.4:-36852143 | None:intergenic |
| CCGCCATCAGATCATATATT+AGG | 0.327193 | 7.4:-36853024 | None:intergenic |
| ACATTGTGCGCATTAGATAA+TGG | 0.340793 | 7.4:-36849801 | None:intergenic |
| ATATATGATGCTAATAACTA+TGG | 0.345799 | 7.4:+36852727 | MS.gene054994:CDS |
| TACTCAGGTTTATAGATTCC+TGG | 0.355706 | 7.4:-36849961 | None:intergenic |
| CACCACTTCACATTACTTGA+TGG | 0.363178 | 7.4:+36852950 | MS.gene054994:CDS |
| TCATCATCGTCATCATTATC+TGG | 0.364129 | 7.4:-36850099 | None:intergenic |
| TCTTTCTTTAGATCTGATAC+TGG | 0.364157 | 7.4:-36849083 | None:intergenic |
| TGCTTTCAGATACTCAAATT+GGG | 0.364970 | 7.4:+36851180 | MS.gene054994:CDS |
| ACTTGCACGGGCCTGTCATC+TGG | 0.368081 | 7.4:-36848042 | None:intergenic |
| TCTTATCCTGTCGGCATACA+TGG | 0.371242 | 7.4:-36855958 | None:intergenic |
| CGTTGGCTTGCAGCTTGGTC+TGG | 0.378002 | 7.4:+36849028 | MS.gene054994:intron |
| CCATTGAGATCAACAAGTTC+GGG | 0.379557 | 7.4:-36850066 | None:intergenic |
| TCACCCAATGGAACCTTAGA+AGG | 0.388575 | 7.4:-36848710 | None:intergenic |
| TGGAAATTGCATGTGTCCTC+TGG | 0.394540 | 7.4:-36852111 | None:intergenic |
| AATGCATCTTGCTGATCATT+AGG | 0.395304 | 7.4:-36851147 | None:intergenic |
| ATGATCAGCAAGATGCATTT+CGG | 0.401431 | 7.4:+36851151 | MS.gene054994:CDS |
| ACCATTGAGATCAACAAGTT+CGG | 0.403010 | 7.4:-36850067 | None:intergenic |
| GTGTGTAATGACGATTTCTA+TGG | 0.403386 | 7.4:+36846958 | None:intergenic |
| TCTCGTTTATTTCAGTCAAC+AGG | 0.403952 | 7.4:-36855923 | None:intergenic |
| AGAGGACACATGCAATTTCC+AGG | 0.406784 | 7.4:+36852113 | MS.gene054994:CDS |
| TGGTTGGATTGCCCTTCGTC+TGG | 0.413355 | 7.4:+36848665 | MS.gene054994:CDS |
| TTGTAAGTATTTAAGTCATT+GGG | 0.424252 | 7.4:-36855772 | None:intergenic |
| CTGAGCCGCGGCCCTTGCAT+TGG | 0.430652 | 7.4:-36849243 | None:intergenic |
| CTCTTCCACTCCGGAGTAGC+AGG | 0.432247 | 7.4:-36850039 | None:intergenic |
| CTGCTACTCCGGAGTGGAAG+AGG | 0.435765 | 7.4:+36850040 | MS.gene054994:CDS |
| GAAAGATCATCGAGTGTGCT+TGG | 0.437704 | 7.4:+36855695 | MS.gene054994:CDS |
| TTCAAATGAGGTTTCCATGC+AGG | 0.443363 | 7.4:+36852792 | MS.gene054994:CDS |
| AGAGGGTATCAAGCATGTTA+AGG | 0.443861 | 7.4:+36849103 | MS.gene054994:CDS |
| GGGTTCATTGTTGCATTTGA+AGG | 0.445023 | 7.4:+36854902 | MS.gene054994:CDS |
| TCATTATTGTGTCAATCTCA+TGG | 0.446224 | 7.4:-36851095 | None:intergenic |
| GGATTGCCCTTCGTCTGGCC+AGG | 0.452831 | 7.4:+36848670 | MS.gene054994:CDS |
| GTATCATGCCGAAAATTTCC+TGG | 0.453234 | 7.4:-36848688 | None:intergenic |
| CACACCCAGTTTCTTTAGAC+AGG | 0.457416 | 7.4:+36852138 | MS.gene054994:CDS |
| AATGTCAATGTCTGTTACTC+AGG | 0.460206 | 7.4:+36849819 | MS.gene054994:CDS |
| CCAGAAGAGCACATAGAAAG+TGG | 0.461582 | 7.4:+36847085 | MS.gene054994:CDS |
| GATACCTTCTAAGGTTCCAT+TGG | 0.465384 | 7.4:+36848706 | MS.gene054994:CDS |
| GATAGTCTGTCCTGCTACTC+CGG | 0.471499 | 7.4:+36850029 | MS.gene054994:CDS |
| TCTTCGACCTGGCCCTCAAA+AGG | 0.473582 | 7.4:-36847019 | None:intergenic |
| TCCATGTCATATATATAGTA+AGG | 0.476655 | 7.4:-36853972 | None:intergenic |
| TGATTGACAGATGAATTATC+AGG | 0.486142 | 7.4:-36849268 | None:intergenic |
| ACCACTTCACATTACTTGAT+GGG | 0.490316 | 7.4:+36852951 | MS.gene054994:CDS |
| CTCATGAAGGTCTCTTAAAG+TGG | 0.491856 | 7.4:+36854661 | MS.gene054994:CDS |
| CCCGAACTTGTTGATCTCAA+TGG | 0.492780 | 7.4:+36850066 | MS.gene054994:CDS |
| ATACCTTCTAAGGTTCCATT+GGG | 0.493016 | 7.4:+36848707 | MS.gene054994:CDS |
| TTATTTACATGCAGGTTGGT+TGG | 0.495751 | 7.4:+36848649 | MS.gene054994:intron |
| CAACTGCGTGTCTGTGATAG+AGG | 0.497145 | 7.4:+36853048 | MS.gene054994:CDS |
| AGTATCAGATCTAAAGAAAG+AGG | 0.498017 | 7.4:+36849085 | MS.gene054994:CDS |
| TCATGAGTACGAGGTACATA+AGG | 0.503688 | 7.4:-36854645 | None:intergenic |
| TGATGGAAGTAAGCTTCCTC+CGG | 0.506250 | 7.4:+36848119 | MS.gene054994:CDS |
| TCTGCGTCGTGTGAGAGCTT+CGG | 0.511610 | 7.4:-36854155 | None:intergenic |
| AAGATCCTTAAATCATATGA+TGG | 0.512777 | 7.4:+36848102 | MS.gene054994:CDS |
| TGGAGCTGATATAGCTCGCC+GGG | 0.516184 | 7.4:+36847105 | MS.gene054994:CDS |
| TGGTACCGTTCATGATTCCT+GGG | 0.518111 | 7.4:-36853939 | None:intergenic |
| AGGTAAAATATCGTCATTGA+AGG | 0.518433 | 7.4:-36848735 | None:intergenic |
| TATGAAATTCATACTTGCAA+CGG | 0.519874 | 7.4:-36850141 | None:intergenic |
| TCAAATGAGGTTTCCATGCA+GGG | 0.525334 | 7.4:+36852793 | MS.gene054994:CDS |
| AAAGAAACTGGGTGTGACCC+TGG | 0.527134 | 7.4:-36852131 | None:intergenic |
| ATCTTTCCAGAATAAAGCAT+GGG | 0.532742 | 7.4:-36855679 | None:intergenic |
| ACATCATTTGCAACCCTGCA+TGG | 0.534363 | 7.4:-36852806 | None:intergenic |
| AAAGGATCTTCATCTTCCTC+CGG | 0.535591 | 7.4:-36847001 | None:intergenic |
| GCCTTCCCATGTATGCCGAC+AGG | 0.536050 | 7.4:+36855952 | MS.gene054994:CDS |
| ATATGACATGGAGCCTTTCA+GGG | 0.538294 | 7.4:+36853983 | MS.gene054994:CDS |
| TCGGGAGCCCTCTTCCACTC+CGG | 0.539359 | 7.4:-36850048 | None:intergenic |
| AAAGAGAGCGTCCAGATGAC+AGG | 0.539782 | 7.4:+36848031 | MS.gene054994:CDS |
| AGGTGGCTGTGATACTTGCA+CGG | 0.543666 | 7.4:-36848055 | None:intergenic |
| TAAGAAATGCATACCCTGAA+AGG | 0.544077 | 7.4:-36853996 | None:intergenic |
| ATCTTCCACCGCTCACAGAA+AGG | 0.545618 | 7.4:-36853894 | None:intergenic |
| GCTTTCAGATACTCAAATTG+GGG | 0.546530 | 7.4:+36851181 | MS.gene054994:CDS |
| TATAATGAATCAATATACTC+AGG | 0.549904 | 7.4:-36849976 | None:intergenic |
| TCTTCATCTTCCTCCGGCAA+AGG | 0.550629 | 7.4:-36846995 | None:intergenic |
| GCTATCGATTCTTATCCTGT+CGG | 0.551715 | 7.4:-36855967 | None:intergenic |
| GGTGGCTGTGATACTTGCAC+GGG | 0.553801 | 7.4:-36848054 | None:intergenic |
| TTCAGTCAACAGGACATCCT+CGG | 0.555159 | 7.4:-36855913 | None:intergenic |
| ATACCTAATATATGATCTGA+TGG | 0.556235 | 7.4:+36853021 | MS.gene054994:CDS |
| TAGATCCAATGCAAGGGCCG+CGG | 0.559315 | 7.4:+36849238 | MS.gene054994:intron |
| TGCTACTCCGGAGTGGAAGA+GGG | 0.559470 | 7.4:+36850041 | MS.gene054994:CDS |
| CATACTTGCAACGGAGGACC+TGG | 0.559887 | 7.4:-36850132 | None:intergenic |
| GCAAAGGACATCATGTAGCT+AGG | 0.560997 | 7.4:+36855988 | MS.gene054994:CDS |
| ATCTTCCTCCGGCAAAGGAG+AGG | 0.560999 | 7.4:-36846990 | None:intergenic |
| AAAGATCATCGAGTGTGCTT+GGG | 0.561891 | 7.4:+36855696 | MS.gene054994:CDS |
| TCCTGTCGGCATACATGGGA+AGG | 0.564005 | 7.4:-36855953 | None:intergenic |
| AATGATGACGATGATGATGA+TGG | 0.565460 | 7.4:+36850105 | MS.gene054994:CDS |
| TATGCAACATGGAAAGCTGA+TGG | 0.568109 | 7.4:+36852698 | MS.gene054994:CDS |
| AGCAGCGGCCTTTCTGTGAG+CGG | 0.568282 | 7.4:+36853886 | MS.gene054994:intron |
| AAGCTCTCACACGACGCAGA+TGG | 0.569710 | 7.4:+36854158 | MS.gene054994:CDS |
| AAAATTTCCTGGCCAGACGA+AGG | 0.570217 | 7.4:-36848677 | None:intergenic |
| GCGCATTATACTCTTCGACC+TGG | 0.572801 | 7.4:-36847030 | None:intergenic |
| AAATTTCCTGGCCAGACGAA+GGG | 0.572890 | 7.4:-36848676 | None:intergenic |
| CCCCATCAAGTAATGTGAAG+TGG | 0.580537 | 7.4:-36852952 | None:intergenic |
| ACACATGGTCACAATCGTAC+AGG | 0.581359 | 7.4:+36849766 | MS.gene054994:CDS |
| TGACTTAAATACTTACAAGA+AGG | 0.583315 | 7.4:+36855777 | MS.gene054994:CDS |
| ATGATGCTAATAACTATGGA+TGG | 0.584416 | 7.4:+36852731 | MS.gene054994:CDS |
| GTGCAAGTATCACAGCCACC+TGG | 0.585488 | 7.4:+36848057 | MS.gene054994:CDS |
| TATGTACCTCGTACTCATGA+AGG | 0.587394 | 7.4:+36854648 | MS.gene054994:CDS |
| TGTGGTTTAGATCCAATGCA+AGG | 0.587594 | 7.4:+36849231 | MS.gene054994:intron |
| AGCGGCCTTTCTGTGAGCGG+TGG | 0.587890 | 7.4:+36853889 | MS.gene054994:intron |
| GATGATGATGATGGAGTACC+AGG | 0.588112 | 7.4:+36850114 | MS.gene054994:CDS |
| CTTATCCTGTCGGCATACAT+GGG | 0.592745 | 7.4:-36855957 | None:intergenic |
| GATGGAAGTAAGCTTCCTCC+GGG | 0.598868 | 7.4:+36848120 | MS.gene054994:CDS |
| TCATTGAAGGATTCACCCAA+TGG | 0.602544 | 7.4:-36848722 | None:intergenic |
| GTGGAGCTGATATAGCTCGC+CGG | 0.603735 | 7.4:+36847104 | MS.gene054994:CDS |
| GAATGCCTCTCCTTTGCCGG+AGG | 0.607982 | 7.4:+36846985 | MS.gene054994:CDS |
| CCACTTCACATTACTTGATG+GGG | 0.609587 | 7.4:+36852952 | MS.gene054994:CDS |
| TTTCTGAATGTGCAGGCCAG+AGG | 0.611157 | 7.4:+36852095 | MS.gene054994:intron |
| TCTGAAATGATTAGGTGAGG+AGG | 0.612439 | 7.4:+36854081 | MS.gene054994:intron |
| GATCTTTCCAGAATAAAGCA+TGG | 0.617360 | 7.4:-36855680 | None:intergenic |
| GTGGTTTAGATCCAATGCAA+GGG | 0.629105 | 7.4:+36849232 | MS.gene054994:intron |
| ATACTTGTTCATTGTACACA+TGG | 0.630429 | 7.4:+36849751 | MS.gene054994:CDS |
| GAAATTCATACTTGCAACGG+AGG | 0.631537 | 7.4:-36850138 | None:intergenic |
| TCCTTACTATATATATGACA+TGG | 0.631783 | 7.4:+36853971 | MS.gene054994:CDS |
| AGGATAAGAATCGATAGCAA+AGG | 0.635554 | 7.4:+36855972 | MS.gene054994:CDS |
| TATAGTAAGGATGTTTGCGA+TGG | 0.637258 | 7.4:-36853959 | None:intergenic |
| GTATCAGATCTAAAGAAAGA+GGG | 0.640851 | 7.4:+36849086 | MS.gene054994:CDS |
| TGTCAATCACTTTGTGTACG+AGG | 0.643052 | 7.4:+36849282 | MS.gene054994:CDS |
| TCTGTCCTGCTACTCCGGAG+TGG | 0.644223 | 7.4:+36850034 | MS.gene054994:CDS |
| TGGACCTGTCTAAAGAAACT+GGG | 0.648364 | 7.4:-36852142 | None:intergenic |
| GAGGACACATGCAATTTCCA+GGG | 0.649406 | 7.4:+36852114 | MS.gene054994:CDS |
| AGAAAGAAGTGATTGAACCC+AGG | 0.649900 | 7.4:+36853922 | MS.gene054994:CDS |
| ATGTTGCATAGTAGTAACGC+TGG | 0.651191 | 7.4:-36852685 | None:intergenic |
| AACGTGAAGAAAGAAAGAAA+CGG | 0.652918 | 7.4:+36848004 | MS.gene054994:CDS |
| GCGCAATATACTCTTCGACC+TGG | 0.662702 | 7.4:-36847063 | None:intergenic |
| GGGATGGTGATAGAAATGAA+TGG | 0.664533 | 7.4:+36855716 | MS.gene054994:CDS |
| AGCGTTACTACTATGCAACA+TGG | 0.671428 | 7.4:+36852687 | MS.gene054994:CDS |
| CTTTCAGATACTCAAATTGG+GGG | 0.674339 | 7.4:+36851182 | MS.gene054994:CDS |
| AATTATCAGGTACTGAGCCG+CGG | 0.676080 | 7.4:-36849255 | None:intergenic |
| TGTCGGCATACATGGGAAGG+CGG | 0.676239 | 7.4:-36855950 | None:intergenic |
| ATCATCGAGTGTGCTTGGGA+TGG | 0.677706 | 7.4:+36855700 | MS.gene054994:CDS |
| TTGAACCCAGGAATCATGAA+CGG | 0.698189 | 7.4:+36853934 | MS.gene054994:CDS |
| TCTTTCCAGAATAAAGCATG+GGG | 0.710208 | 7.4:-36855678 | None:intergenic |
| CCTAATATATGATCTGATGG+CGG | 0.716701 | 7.4:+36853024 | MS.gene054994:CDS |
| AAGAGACCTTCATGAGTACG+AGG | 0.716715 | 7.4:-36854654 | None:intergenic |
| TCAGGTTTATAGATTCCTGG+AGG | 0.718001 | 7.4:-36849958 | None:intergenic |
| CATAAAAGACAATATCACCG+AGG | 0.749317 | 7.4:+36855896 | MS.gene054994:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 36846965 | 36856019 | 36846965 | ID=MS.gene054994 |
| chr7.4 | mRNA | 36846965 | 36856019 | 36846965 | ID=MS.gene054994.t1;Parent=MS.gene054994 |
| chr7.4 | exon | 36846965 | 36847126 | 36846965 | ID=MS.gene054994.t1.exon1;Parent=MS.gene054994.t1 |
| chr7.4 | CDS | 36846965 | 36847126 | 36846965 | ID=cds.MS.gene054994.t1;Parent=MS.gene054994.t1 |
| chr7.4 | exon | 36848003 | 36848141 | 36848003 | ID=MS.gene054994.t1.exon2;Parent=MS.gene054994.t1 |
| chr7.4 | CDS | 36848003 | 36848141 | 36848003 | ID=cds.MS.gene054994.t1;Parent=MS.gene054994.t1 |
| chr7.4 | exon | 36848663 | 36848814 | 36848663 | ID=MS.gene054994.t1.exon3;Parent=MS.gene054994.t1 |
| chr7.4 | CDS | 36848663 | 36848814 | 36848663 | ID=cds.MS.gene054994.t1;Parent=MS.gene054994.t1 |
| chr7.4 | exon | 36849041 | 36849124 | 36849041 | ID=MS.gene054994.t1.exon4;Parent=MS.gene054994.t1 |
| chr7.4 | CDS | 36849041 | 36849124 | 36849041 | ID=cds.MS.gene054994.t1;Parent=MS.gene054994.t1 |
| chr7.4 | exon | 36849241 | 36849303 | 36849241 | ID=MS.gene054994.t1.exon5;Parent=MS.gene054994.t1 |
| chr7.4 | CDS | 36849241 | 36849303 | 36849241 | ID=cds.MS.gene054994.t1;Parent=MS.gene054994.t1 |
| chr7.4 | exon | 36849709 | 36849840 | 36849709 | ID=MS.gene054994.t1.exon6;Parent=MS.gene054994.t1 |
| chr7.4 | CDS | 36849709 | 36849840 | 36849709 | ID=cds.MS.gene054994.t1;Parent=MS.gene054994.t1 |
| chr7.4 | exon | 36849931 | 36850149 | 36849931 | ID=MS.gene054994.t1.exon7;Parent=MS.gene054994.t1 |
| chr7.4 | CDS | 36849931 | 36850149 | 36849931 | ID=cds.MS.gene054994.t1;Parent=MS.gene054994.t1 |
| chr7.4 | exon | 36851090 | 36851209 | 36851090 | ID=MS.gene054994.t1.exon8;Parent=MS.gene054994.t1 |
| chr7.4 | CDS | 36851090 | 36851209 | 36851090 | ID=cds.MS.gene054994.t1;Parent=MS.gene054994.t1 |
| chr7.4 | exon | 36852110 | 36852159 | 36852110 | ID=MS.gene054994.t1.exon9;Parent=MS.gene054994.t1 |
| chr7.4 | CDS | 36852110 | 36852159 | 36852110 | ID=cds.MS.gene054994.t1;Parent=MS.gene054994.t1 |
| chr7.4 | exon | 36852664 | 36852826 | 36852664 | ID=MS.gene054994.t1.exon10;Parent=MS.gene054994.t1 |
| chr7.4 | CDS | 36852664 | 36852826 | 36852664 | ID=cds.MS.gene054994.t1;Parent=MS.gene054994.t1 |
| chr7.4 | exon | 36852932 | 36853069 | 36852932 | ID=MS.gene054994.t1.exon11;Parent=MS.gene054994.t1 |
| chr7.4 | CDS | 36852932 | 36853069 | 36852932 | ID=cds.MS.gene054994.t1;Parent=MS.gene054994.t1 |
| chr7.4 | exon | 36853891 | 36854004 | 36853891 | ID=MS.gene054994.t1.exon12;Parent=MS.gene054994.t1 |
| chr7.4 | CDS | 36853891 | 36854004 | 36853891 | ID=cds.MS.gene054994.t1;Parent=MS.gene054994.t1 |
| chr7.4 | exon | 36854095 | 36854193 | 36854095 | ID=MS.gene054994.t1.exon13;Parent=MS.gene054994.t1 |
| chr7.4 | CDS | 36854095 | 36854193 | 36854095 | ID=cds.MS.gene054994.t1;Parent=MS.gene054994.t1 |
| chr7.4 | exon | 36854633 | 36854722 | 36854633 | ID=MS.gene054994.t1.exon14;Parent=MS.gene054994.t1 |
| chr7.4 | CDS | 36854633 | 36854722 | 36854633 | ID=cds.MS.gene054994.t1;Parent=MS.gene054994.t1 |
| chr7.4 | exon | 36854842 | 36854923 | 36854842 | ID=MS.gene054994.t1.exon15;Parent=MS.gene054994.t1 |
| chr7.4 | CDS | 36854842 | 36854923 | 36854842 | ID=cds.MS.gene054994.t1;Parent=MS.gene054994.t1 |
| chr7.4 | exon | 36855668 | 36855798 | 36855668 | ID=MS.gene054994.t1.exon16;Parent=MS.gene054994.t1 |
| chr7.4 | CDS | 36855668 | 36855798 | 36855668 | ID=cds.MS.gene054994.t1;Parent=MS.gene054994.t1 |
| chr7.4 | exon | 36855885 | 36856019 | 36855885 | ID=MS.gene054994.t1.exon17;Parent=MS.gene054994.t1 |
| chr7.4 | CDS | 36855885 | 36856019 | 36855885 | ID=cds.MS.gene054994.t1;Parent=MS.gene054994.t1 |
| Gene Sequence |
| Protein sequence |
