Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39280.t1 | GAU26200.1 | 99.1 | 222 | 2 | 0 | 1 | 222 | 1 | 222 | 3.80E-97 | 364.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39280.t1 | P80269 | 82.5 | 229 | 33 | 1 | 1 | 222 | 1 | 229 | 3.6e-80 | 299.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39280.t1 | A0A2Z6MRF6 | 99.1 | 222 | 2 | 0 | 1 | 222 | 1 | 222 | 2.7e-97 | 364.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051924 | MS.gene39280 | 0.804864 | 1.76E-49 | -1.69E-46 |
| MS.gene052358 | MS.gene39280 | 0.819423 | 1.17E-52 | -1.69E-46 |
| MS.gene052673 | MS.gene39280 | 0.859097 | 5.23E-63 | -1.69E-46 |
| MS.gene054291 | MS.gene39280 | 0.80145 | 8.95E-49 | -1.69E-46 |
| MS.gene060634 | MS.gene39280 | 0.851128 | 1.09E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene022767 | MS.gene39280 | PPI |
| MS.gene020200 | MS.gene39280 | PPI |
| MS.gene020201 | MS.gene39280 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39280.t1 | MTR_8g010570 | 99.550 | 222 | 1 | 0 | 1 | 222 | 1 | 222 | 4.43e-166 | 456 |
| MS.gene39280.t1 | MTR_8g010570 | 99.550 | 222 | 1 | 0 | 1 | 222 | 21 | 242 | 6.73e-166 | 457 |
| MS.gene39280.t1 | MTR_8g010570 | 99.476 | 191 | 1 | 0 | 1 | 191 | 21 | 211 | 9.28e-142 | 395 |
| MS.gene39280.t1 | MTR_4g006100 | 36.449 | 107 | 62 | 2 | 92 | 197 | 776 | 877 | 2.78e-15 | 74.7 |
| MS.gene39280.t1 | MTR_6g042210 | 36.364 | 110 | 64 | 2 | 92 | 200 | 38 | 142 | 5.22e-15 | 70.1 |
| MS.gene39280.t1 | MTR_3g450170 | 36.364 | 110 | 64 | 2 | 92 | 200 | 38 | 142 | 5.22e-15 | 70.1 |
| MS.gene39280.t1 | MTR_0002s0160 | 34.545 | 110 | 66 | 2 | 92 | 200 | 40 | 144 | 1.90e-14 | 70.9 |
| MS.gene39280.t1 | MTR_7g021700 | 36.364 | 110 | 64 | 2 | 92 | 200 | 512 | 616 | 2.70e-14 | 71.6 |
| MS.gene39280.t1 | MTR_3g054410 | 33.981 | 103 | 62 | 2 | 92 | 193 | 35 | 132 | 8.31e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39280.t1 | AT1G16700 | 83.784 | 222 | 36 | 0 | 1 | 222 | 1 | 222 | 6.70e-139 | 388 |
| MS.gene39280.t1 | AT1G79010 | 81.982 | 222 | 40 | 0 | 1 | 222 | 1 | 222 | 1.28e-135 | 380 |
| MS.gene39280.t1 | ATCG01090 | 36.290 | 124 | 73 | 2 | 78 | 200 | 24 | 142 | 1.80e-17 | 77.0 |
Find 52 sgRNAs with CRISPR-Local
Find 382 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAAACGACAGACCTAATT+TGG | 0.303708 | 8.2:-80770182 | None:intergenic |
| TCTGTAGAAAATTCAAAGTT+TGG | 0.316476 | 8.2:-80774548 | None:intergenic |
| CGAAGGAAATTTCAAAGGAT+TGG | 0.317932 | 8.2:+80770773 | MS.gene39280:CDS |
| CTGCACAACCCTCAAAATTA+TGG | 0.327667 | 8.2:+80770130 | MS.gene39280:CDS |
| AACGATATTATCAGCGATAA+AGG | 0.338868 | 8.2:-80774810 | None:intergenic |
| AAAGAGAAGCTGCTTGAAAA+TGG | 0.343625 | 8.2:+80774742 | MS.gene39280:CDS |
| CACCTCTACTCTACCAAATT+AGG | 0.367504 | 8.2:+80770169 | MS.gene39280:CDS |
| CCTTCAACAATGGCATCAAC+TGG | 0.381113 | 8.2:-80774524 | None:intergenic |
| CTCAATGGGCCTTTCTCAAA+TGG | 0.395763 | 8.2:-80771068 | None:intergenic |
| GTTTAGGCTGTGGCAGGTCA+AGG | 0.399468 | 8.2:+80770106 | MS.gene39280:intron |
| TGCTTGAAAATGGTGATAGA+TGG | 0.410918 | 8.2:+80774752 | MS.gene39280:CDS |
| ATCAATTATCCATTTGAGAA+AGG | 0.435457 | 8.2:+80771059 | MS.gene39280:CDS |
| CCAGTTGATGCCATTGTTGA+AGG | 0.439001 | 8.2:+80774524 | MS.gene39280:CDS |
| ATTTCAAAGGATTGGAGTAC+AGG | 0.442999 | 8.2:+80770781 | MS.gene39280:CDS |
| TTTCTCACCGAGCTTGTTCG+AGG | 0.455559 | 8.2:+80770917 | MS.gene39280:CDS |
| TCAATTGTTATTGCTTGAGC+AGG | 0.457553 | 8.2:-80774328 | None:intergenic |
| GATAAAGGCTTTCAGATCTC+AGG | 0.462781 | 8.2:-80774795 | None:intergenic |
| ATGCTTGTTTAGGCTGTGGC+AGG | 0.482178 | 8.2:+80770100 | MS.gene39280:intron |
| CCACGGAAACGAGGACTCAA+TGG | 0.482939 | 8.2:-80771083 | None:intergenic |
| AAACCGCAGAGGACGAAGAA+AGG | 0.486005 | 8.2:+80770740 | MS.gene39280:intron |
| CATTGAGTCCTCGTTTCCGT+GGG | 0.492044 | 8.2:+80771084 | MS.gene39280:CDS |
| CCATTGAGTCCTCGTTTCCG+TGG | 0.498621 | 8.2:+80771083 | MS.gene39280:CDS |
| TTTAGGCTGTGGCAGGTCAA+GGG | 0.501802 | 8.2:+80770107 | MS.gene39280:intron |
| AACCGCAGAGGACGAAGAAA+GGG | 0.505696 | 8.2:+80770741 | MS.gene39280:intron |
| AGCAATAACAATTGAGGCTG+AGG | 0.506884 | 8.2:+80774336 | MS.gene39280:CDS |
| CACGGAAACGAGGACTCAAT+GGG | 0.507055 | 8.2:-80771082 | None:intergenic |
| GAGGCTGAGGAGCGTGAAGA+TGG | 0.517969 | 8.2:+80774349 | MS.gene39280:CDS |
| AAAGTTTGGCCCTTCAACAA+TGG | 0.520084 | 8.2:-80774534 | None:intergenic |
| TGCTTGCAAACTTTGTGAAG+CGG | 0.536589 | 8.2:+80771151 | MS.gene39280:CDS |
| GCACTCAGAAGATATCCAAC+AGG | 0.542096 | 8.2:+80771113 | MS.gene39280:CDS |
| ATGCAACGTTCCTCTCCTGT+TGG | 0.543622 | 8.2:-80771128 | None:intergenic |
| ACTTGCGAAGGAAATTTCAA+AGG | 0.546416 | 8.2:+80770768 | MS.gene39280:CDS |
| AAATGGCCGCATTCTTAGCT+CGG | 0.559379 | 8.2:+80769465 | None:intergenic |
| TGCTCAAGCAATAACAATTG+AGG | 0.563934 | 8.2:+80774330 | MS.gene39280:CDS |
| ATGACCAAGTGCATCTATTG+TGG | 0.582682 | 8.2:+80774482 | MS.gene39280:CDS |
| TTCTGAGTGCATGTTCCCCA+CGG | 0.584009 | 8.2:-80771100 | None:intergenic |
| CTTCAACAATGGCATCAACT+GGG | 0.587038 | 8.2:-80774523 | None:intergenic |
| CATTAGACCTCGAACAAGCT+CGG | 0.587841 | 8.2:-80770924 | None:intergenic |
| GCTTGAAAATGGTGATAGAT+GGG | 0.594111 | 8.2:+80774753 | MS.gene39280:CDS |
| CAGTTGATGCCATTGTTGAA+GGG | 0.594171 | 8.2:+80774525 | MS.gene39280:CDS |
| GAGGAATCTTACAAGCTGGC+GGG | 0.598298 | 8.2:-80769510 | None:intergenic |
| TTACTGACCGAGTTGTCCTA+CGG | 0.600425 | 8.2:-80774375 | None:intergenic |
| ATGGCAGCCGTAGGACAACT+CGG | 0.602662 | 8.2:+80774368 | MS.gene39280:CDS |
| AGAGGAATCTTACAAGCTGG+CGG | 0.622954 | 8.2:-80769511 | None:intergenic |
| GACCTAATTTGGTAGAGTAG+AGG | 0.629006 | 8.2:-80770171 | None:intergenic |
| AAATCCACAATAGATGCACT+TGG | 0.636535 | 8.2:-80774486 | None:intergenic |
| GCATGTTCCCCACGGAAACG+AGG | 0.652968 | 8.2:-80771092 | None:intergenic |
| CAGAAGATATCCAACAGGAG+AGG | 0.683452 | 8.2:+80771118 | MS.gene39280:CDS |
| ATTGAGTCCTCGTTTCCGTG+GGG | 0.686086 | 8.2:+80771085 | MS.gene39280:CDS |
| AGCGTGAAGATGGCAGCCGT+AGG | 0.695064 | 8.2:+80774359 | MS.gene39280:CDS |
| AGAAAGGGAGAAACTTGCGA+AGG | 0.699091 | 8.2:+80770756 | MS.gene39280:CDS |
| AGATTTCCGAGCTAAGAATG+CGG | 0.745512 | 8.2:-80769471 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAGATATAAACAATTA+TGG | - | chr8.2:80774635-80774654 | None:intergenic | 10.0% |
| !! | TTATACCAATAAAAATATTA+AGG | - | chr8.2:80769994-80770013 | None:intergenic | 10.0% |
| !!! | AAATTAGATTTTCTTATTAT+AGG | - | chr8.2:80771929-80771948 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTTTGAG+AGG | - | chr8.2:80772634-80772653 | None:intergenic | 10.0% |
| !! | AAAATCAAATTGAAAATGAA+AGG | - | chr8.2:80770821-80770840 | None:intergenic | 15.0% |
| !! | AAGAAAATCTAATTTCTTAA+TGG | + | chr8.2:80771934-80771953 | MS.gene39280:intron | 15.0% |
| !! | AGAAAATCTAATTTCTTAAT+GGG | + | chr8.2:80771935-80771954 | MS.gene39280:intron | 15.0% |
| !! | ATAGAGTAAAAAATAATAAG+AGG | - | chr8.2:80769532-80769551 | None:intergenic | 15.0% |
| !! | ATGGATATGTATAATATATT+TGG | - | chr8.2:80774175-80774194 | None:intergenic | 15.0% |
| !! | TAATTTAAATATCCCAAATA+AGG | + | chr8.2:80773784-80773803 | MS.gene39280:intron | 15.0% |
| !! | TAATTTAGATATTCCAAATA+AGG | + | chr8.2:80771436-80771455 | MS.gene39280:intron | 15.0% |
| !! | TCAATATAAAGGAAATAAAA+AGG | - | chr8.2:80774587-80774606 | None:intergenic | 15.0% |
| !!! | ATTTTCTTATTATAGGAAAT+TGG | - | chr8.2:80771922-80771941 | None:intergenic | 15.0% |
| !! | AAAAAAGTAGATATTCATCA+AGG | - | chr8.2:80770710-80770729 | None:intergenic | 20.0% |
| !! | AAAAAGTAGATATTCATCAA+GGG | - | chr8.2:80770709-80770728 | None:intergenic | 20.0% |
| !! | AAAACATGGAAATGAAATAT+TGG | - | chr8.2:80774202-80774221 | None:intergenic | 20.0% |
| !! | AAACTACATTTCAATATTTC+AGG | - | chr8.2:80774061-80774080 | None:intergenic | 20.0% |
| !! | ACTCATATAGTTCAATATAA+AGG | - | chr8.2:80774598-80774617 | None:intergenic | 20.0% |
| !! | AGACAAATTTCTAATTCTTA+GGG | - | chr8.2:80771417-80771436 | None:intergenic | 20.0% |
| !! | AGAGAGTTTGAATATAAAAT+TGG | - | chr8.2:80772530-80772549 | None:intergenic | 20.0% |
| !! | CATTGTTAAACTGAAAATAT+TGG | - | chr8.2:80771196-80771215 | None:intergenic | 20.0% |
| !! | GAAATGAAATATTGGAATAA+TGG | - | chr8.2:80774194-80774213 | None:intergenic | 20.0% |
| !! | TAACTAGATTTCAATATTTC+AGG | - | chr8.2:80773114-80773133 | None:intergenic | 20.0% |
| !! | TAATGTAGAATCAAATGTAT+AGG | + | chr8.2:80772685-80772704 | MS.gene39280:intron | 20.0% |
| !! | TAGACAAATTTCTAATTCTT+AGG | - | chr8.2:80771418-80771437 | None:intergenic | 20.0% |
| !! | TATTGAAATGTAGTTTATAC+AGG | + | chr8.2:80774065-80774084 | MS.gene39280:intron | 20.0% |
| !! | TTTATTAATGGCTCAATTTA+TGG | - | chr8.2:80774124-80774143 | None:intergenic | 20.0% |
| !! | TTTATTGGTATAAGATTAAG+AGG | + | chr8.2:80770001-80770020 | MS.gene39280:intron | 20.0% |
| !!! | AATAGCAGTTTGTTTTAATA+TGG | + | chr8.2:80772895-80772914 | MS.gene39280:intron | 20.0% |
| !!! | AATTAGATGTTTGTTATTGA+TGG | - | chr8.2:80770566-80770585 | None:intergenic | 20.0% |
| !!! | ATAAACCTTTATTAGGTTTT+TGG | + | chr8.2:80772728-80772747 | MS.gene39280:intron | 20.0% |
| !!! | ATCTAGATTTTATGCATAAT+CGG | + | chr8.2:80771535-80771554 | MS.gene39280:intron | 20.0% |
| !!! | ATTAGATGTTTGTTATTGAT+GGG | - | chr8.2:80770565-80770584 | None:intergenic | 20.0% |
| !!! | GATGTCCTTAATATTTTTAT+TGG | + | chr8.2:80769986-80770005 | MS.gene39280:intron | 20.0% |
| !!! | TCGTTCTTAATAGTTTTTTT+AGG | - | chr8.2:80769763-80769782 | None:intergenic | 20.0% |
| !!! | TGAAATGTTTTCTTTATAAG+TGG | + | chr8.2:80772922-80772941 | MS.gene39280:intron | 20.0% |
| !!! | TTAGTAAGGGTATTTATTAA+TGG | - | chr8.2:80774136-80774155 | None:intergenic | 20.0% |
| !!! | TTATATGTTTTAACCGTTAA+AGG | + | chr8.2:80774705-80774724 | MS.gene39280:intron | 20.0% |
| !!! | TTTCAATATTTCAGGTTATT+AGG | - | chr8.2:80773106-80773125 | None:intergenic | 20.0% |
| !!! | TTTGGAATATCTAAATTAGA+CGG | - | chr8.2:80771434-80771453 | None:intergenic | 20.0% |
| ! | AAAAGTAGATATTCATCAAG+GGG | - | chr8.2:80770708-80770727 | None:intergenic | 25.0% |
| ! | AAACAAGCATAACAACAATA+AGG | - | chr8.2:80770090-80770109 | None:intergenic | 25.0% |
| ! | AAATAGATGAAAATGGAAGT+AGG | + | chr8.2:80771669-80771688 | MS.gene39280:intron | 25.0% |
| ! | AACTGCTATTATAACTGTAT+AGG | - | chr8.2:80772885-80772904 | None:intergenic | 25.0% |
| ! | AAGTACAAGATATAAACCTT+TGG | + | chr8.2:80773284-80773303 | MS.gene39280:intron | 25.0% |
| ! | AATACCCTTACTAATAACTA+TGG | + | chr8.2:80774142-80774161 | MS.gene39280:intron | 25.0% |
| ! | AATGCCAAAATAGATGAAAA+TGG | + | chr8.2:80771662-80771681 | MS.gene39280:intron | 25.0% |
| ! | ACAAGACATAAACCTTTATT+AGG | + | chr8.2:80772721-80772740 | MS.gene39280:intron | 25.0% |
| ! | ACAATTCAGTCTCAAAATAT+AGG | + | chr8.2:80772436-80772455 | MS.gene39280:intron | 25.0% |
| ! | ACAGTTATAAAAGACACTTA+CGG | - | chr8.2:80770984-80771003 | None:intergenic | 25.0% |
| ! | ACATTCCAAAAACCTAATAA+AGG | - | chr8.2:80772736-80772755 | None:intergenic | 25.0% |
| ! | AGACAAATTTCTAATTCGTA+GGG | - | chr8.2:80773765-80773784 | None:intergenic | 25.0% |
| ! | AGAGAGTTTGAATATAAAGT+TGG | - | chr8.2:80773150-80773169 | None:intergenic | 25.0% |
| ! | AGTACAAGATATAAACCTTT+GGG | + | chr8.2:80773285-80773304 | MS.gene39280:intron | 25.0% |
| ! | ATAAAGCAATTATGAAGAAG+TGG | - | chr8.2:80774229-80774248 | None:intergenic | 25.0% |
| ! | ATAATTGATCTGCATAAATG+AGG | - | chr8.2:80771048-80771067 | None:intergenic | 25.0% |
| ! | ATCAATTATCCATTTGAGAA+AGG | + | chr8.2:80771059-80771078 | MS.gene39280:CDS | 25.0% |
| ! | ATTTATGGTAAATTGAGAGT+TGG | - | chr8.2:80774109-80774128 | None:intergenic | 25.0% |
| ! | ATTTGCCATAGTTATTAGTA+AGG | - | chr8.2:80774150-80774169 | None:intergenic | 25.0% |
| ! | CTGATCACGAAAAAATTATT+TGG | - | chr8.2:80774302-80774321 | None:intergenic | 25.0% |
| ! | GCATATAAAATAGCATAAGT+AGG | + | chr8.2:80771631-80771650 | MS.gene39280:intron | 25.0% |
| ! | TAACTAGATTTCAATGATTC+AGG | - | chr8.2:80772494-80772513 | None:intergenic | 25.0% |
| ! | TAGACAAATTTCTAATTCGT+AGG | - | chr8.2:80773766-80773785 | None:intergenic | 25.0% |
| ! | TATGGATAAACAATGCTATT+AGG | + | chr8.2:80772399-80772418 | MS.gene39280:intron | 25.0% |
| ! | TCTATAGTTGAACTAGATTT+GGG | + | chr8.2:80771375-80771394 | MS.gene39280:intron | 25.0% |
| ! | TCTGTAGAAAATTCAAAGTT+TGG | - | chr8.2:80774551-80774570 | None:intergenic | 25.0% |
| ! | TGAGAGTTGGAATATAAAAT+TGG | - | chr8.2:80774096-80774115 | None:intergenic | 25.0% |
| ! | TTAATCACGTTATGTAAAAG+AGG | - | chr8.2:80770845-80770864 | None:intergenic | 25.0% |
| ! | TTCTATAGTTGAACTAGATT+TGG | + | chr8.2:80771374-80771393 | MS.gene39280:intron | 25.0% |
| ! | TTGATATAACATTCCATAGT+GGG | + | chr8.2:80769818-80769837 | MS.gene39280:intron | 25.0% |
| ! | TTTGATATAACATTCCATAG+TGG | + | chr8.2:80769817-80769836 | MS.gene39280:intron | 25.0% |
| ! | TTTGCCATAGTTATTAGTAA+GGG | - | chr8.2:80774149-80774168 | None:intergenic | 25.0% |
| !! | ACTTCCATTTTCATCTATTT+TGG | - | chr8.2:80771669-80771688 | None:intergenic | 25.0% |
| !! | ATTACACAGAAATACGATTT+TGG | + | chr8.2:80772176-80772195 | MS.gene39280:intron | 25.0% |
| !! | ATTTTATGCATAATCGGTAA+GGG | + | chr8.2:80771541-80771560 | MS.gene39280:intron | 25.0% |
| !! | TAAGTGTCTTTTATAACTGT+TGG | + | chr8.2:80770984-80771003 | MS.gene39280:intron | 25.0% |
| !! | TATTGTTGTTATGCTTGTTT+AGG | + | chr8.2:80770090-80770109 | MS.gene39280:intron | 25.0% |
| !! | TTACACAGAAATACGATTTT+GGG | + | chr8.2:80772177-80772196 | MS.gene39280:intron | 25.0% |
| !!! | AATAGCAGTTGGTTTTAATA+TGG | + | chr8.2:80773862-80773881 | MS.gene39280:intron | 25.0% |
| !!! | CATAGCAGTTTGTTTTAATA+TGG | + | chr8.2:80772286-80772305 | MS.gene39280:intron | 25.0% |
| !!! | TGAGAATGATGTTTCTTTTT+TGG | + | chr8.2:80770299-80770318 | MS.gene39280:intron | 25.0% |
| !!! | TTTTTTTTTTGAGAGGATAC+AGG | - | chr8.2:80772627-80772646 | None:intergenic | 25.0% |
| AAAGTAGATATTCATCAAGG+GGG | - | chr8.2:80770707-80770726 | None:intergenic | 30.0% | |
| ACATCTAATTAATTGAGTCG+AGG | + | chr8.2:80770576-80770595 | MS.gene39280:intron | 30.0% | |
| AGCTACCAAGAATATGATAA+TGG | + | chr8.2:80770346-80770365 | MS.gene39280:intron | 30.0% | |
| AGGTTCTTGTAAATATGTAG+AGG | + | chr8.2:80770021-80770040 | MS.gene39280:intron | 30.0% | |
| ATAACGTGATTAAATCACTG+TGG | + | chr8.2:80770852-80770871 | MS.gene39280:intron | 30.0% | |
| ATACAAAACAATGAAGCAAC+AGG | - | chr8.2:80773188-80773207 | None:intergenic | 30.0% | |
| ATCTGTGACATATCTTTAGT+TGG | + | chr8.2:80773711-80773730 | MS.gene39280:intron | 30.0% | |
| CATAGATGATGATATTGCTT+TGG | + | chr8.2:80769565-80769584 | MS.gene39280:intron | 30.0% | |
| CATCTAATTAATTGAGTCGA+GGG | + | chr8.2:80770577-80770596 | MS.gene39280:intron | 30.0% | |
| CGATCTAGAGATTAATGATT+TGG | + | chr8.2:80769780-80769799 | MS.gene39280:intron | 30.0% | |
| CTAAACTAACTGAAATGTCT+AGG | - | chr8.2:80770412-80770431 | None:intergenic | 30.0% | |
| GAAGAAGTGGAAATAAAACA+TGG | - | chr8.2:80774216-80774235 | None:intergenic | 30.0% | |
| GAGAAAAGTAAATGAAGATC+CGG | - | chr8.2:80770661-80770680 | None:intergenic | 30.0% | |
| GCTACCAAGAATATGATAAT+GGG | + | chr8.2:80770347-80770366 | MS.gene39280:intron | 30.0% | |
| TAATGTAGAAACAAATACGC+AGG | + | chr8.2:80773253-80773272 | MS.gene39280:intron | 30.0% | |
| TAGAAATGATGGTAGAAACT+CGG | + | chr8.2:80769671-80769690 | MS.gene39280:intron | 30.0% | |
| TAGAACAAGACATAAAGCTT+TGG | + | chr8.2:80771329-80771348 | MS.gene39280:intron | 30.0% | |
| TAGGGATAAACAAAGCTATT+AGG | + | chr8.2:80773976-80773995 | MS.gene39280:intron | 30.0% | |
| TATACGACTATAATAGCAGT+TGG | + | chr8.2:80773851-80773870 | MS.gene39280:intron | 30.0% | |
| TCAAACTCTCTAATTCTTAG+AGG | + | chr8.2:80771462-80771481 | MS.gene39280:intron | 30.0% | |
| TGGAAGAAATAGAGGAAAAT+GGG | + | chr8.2:80773369-80773388 | MS.gene39280:intron | 30.0% | |
| TGGAGTACAGGTATTTATTT+AGG | + | chr8.2:80770793-80770812 | MS.gene39280:intron | 30.0% | |
| TGTAAATGCTGTGAATGATT+TGG | - | chr8.2:80770278-80770297 | None:intergenic | 30.0% | |
| TTCCTATACAGTTGTAATCA+TGG | + | chr8.2:80771504-80771523 | MS.gene39280:intron | 30.0% | |
| TTTATATATTCAAACCGCAG+AGG | + | chr8.2:80770729-80770748 | MS.gene39280:intron | 30.0% | |
| ! | CTACCAAGAATATGATAATG+GGG | + | chr8.2:80770348-80770367 | MS.gene39280:intron | 30.0% |
| ! | GATTTTATGCATAATCGGTA+AGG | + | chr8.2:80771540-80771559 | MS.gene39280:intron | 30.0% |
| ! | TAACAGATGTAGCTTTTAGT+TGG | + | chr8.2:80773229-80773248 | MS.gene39280:intron | 30.0% |
| ! | TCTAATTTGTCAAATCTTGC+AGG | + | chr8.2:80774447-80774466 | MS.gene39280:intron | 30.0% |
| ! | TTTCAATGATTCAGGTTATC+AGG | - | chr8.2:80772486-80772505 | None:intergenic | 30.0% |
| ! | TTTTATGCATAATCGGTAAG+GGG | + | chr8.2:80771542-80771561 | MS.gene39280:intron | 30.0% |
| !! | TACCAAGAATATGATAATGG+GGG | + | chr8.2:80770349-80770368 | MS.gene39280:intron | 30.0% |
| !! | TATGTAGAGGTTTTGTGTAT+AGG | + | chr8.2:80770034-80770053 | MS.gene39280:intron | 30.0% |
| !! | TTGTTATTGATGGGATTTTG+AGG | - | chr8.2:80770556-80770575 | None:intergenic | 30.0% |
| !!! | ACGGTAAGGTAAGAATTTTT+TGG | + | chr8.2:80771839-80771858 | MS.gene39280:intron | 30.0% |
| !!! | AGGAAATTGGATTTTTTGAG+TGG | - | chr8.2:80771909-80771928 | None:intergenic | 30.0% |
| !!! | GGTAAGAATTTTTTGGAAAG+AGG | + | chr8.2:80771846-80771865 | MS.gene39280:intron | 30.0% |
| AAAACGAGTTTCAGGGAATT+GGG | - | chr8.2:80772001-80772020 | None:intergenic | 35.0% | |
| AAAATATGGAAGCAGGAGAA+AGG | + | chr8.2:80771703-80771722 | MS.gene39280:intron | 35.0% | |
| AAAGAGAAGCTGCTTGAAAA+TGG | + | chr8.2:80774742-80774761 | MS.gene39280:CDS | 35.0% | |
| AAATCCACAATAGATGCACT+TGG | - | chr8.2:80774489-80774508 | None:intergenic | 35.0% | |
| AAGAAATAGAGGAAAATGGG+AGG | + | chr8.2:80773372-80773391 | MS.gene39280:intron | 35.0% | |
| AAGCAGATCTTGTAAACAGT+AGG | + | chr8.2:80773957-80773976 | MS.gene39280:intron | 35.0% | |
| AATACTAAACCCTCCTCATT+TGG | + | chr8.2:80773426-80773445 | MS.gene39280:intron | 35.0% | |
| ACAAACTGCTATGATAACCA+TGG | - | chr8.2:80772279-80772298 | None:intergenic | 35.0% | |
| ACAGATTCATAAACCTACCA+AGG | - | chr8.2:80773697-80773716 | None:intergenic | 35.0% | |
| ACTGTCAATTGACATATCAC+CGG | + | chr8.2:80770639-80770658 | MS.gene39280:intron | 35.0% | |
| ACTTGCGAAGGAAATTTCAA+AGG | + | chr8.2:80770768-80770787 | MS.gene39280:CDS | 35.0% | |
| AGAAATAGAGGAAAATGGGA+GGG | + | chr8.2:80773373-80773392 | MS.gene39280:intron | 35.0% | |
| AGACGGATGTCTAATTCTTA+GGG | - | chr8.2:80772793-80772812 | None:intergenic | 35.0% | |
| AGCAGATCTAGTAAAGAGTA+AGG | + | chr8.2:80772381-80772400 | MS.gene39280:intron | 35.0% | |
| AGCAGATCTAGTAAAGAGTA+TGG | + | chr8.2:80772381-80772400 | MS.gene39280:intron | 35.0% | |
| AGCAGATCTTGTAAACAGTA+GGG | + | chr8.2:80773958-80773977 | MS.gene39280:intron | 35.0% | |
| AGGAATGCCAGAAGAAAATA+TGG | + | chr8.2:80771689-80771708 | MS.gene39280:intron | 35.0% | |
| ATAAGAGGAATCTTACAAGC+TGG | - | chr8.2:80769517-80769536 | None:intergenic | 35.0% | |
| ATACTAAACCCTCCTCATTT+GGG | + | chr8.2:80773427-80773446 | MS.gene39280:intron | 35.0% | |
| ATGAGGAGGGTTTAGTATTA+TGG | - | chr8.2:80773425-80773444 | None:intergenic | 35.0% | |
| ATGCTACGAATCAAATATGC+AGG | + | chr8.2:80771297-80771316 | MS.gene39280:intron | 35.0% | |
| ATTCTACATTACCCAACTAC+AGG | - | chr8.2:80772676-80772695 | None:intergenic | 35.0% | |
| ATTTCAAAGGATTGGAGTAC+AGG | + | chr8.2:80770781-80770800 | MS.gene39280:CDS | 35.0% | |
| CGAAGGAAATTTCAAAGGAT+TGG | + | chr8.2:80770773-80770792 | MS.gene39280:CDS | 35.0% | |
| GAAAGGATCTCAGGAAATAA+TGG | + | chr8.2:80771720-80771739 | MS.gene39280:intron | 35.0% | |
| GACAAATTAGAGCACAATTG+AGG | - | chr8.2:80774438-80774457 | None:intergenic | 35.0% | |
| GAGAGTTTGACAACCTTATT+TGG | - | chr8.2:80771452-80771471 | None:intergenic | 35.0% | |
| GCAGATCTAGTAAAGAGTAA+GGG | + | chr8.2:80772992-80773011 | MS.gene39280:intron | 35.0% | |
| GCTTGAAAATGGTGATAGAT+GGG | + | chr8.2:80774753-80774772 | MS.gene39280:CDS | 35.0% | |
| GGATTAGAAAACGAGTTTCA+GGG | - | chr8.2:80772008-80772027 | None:intergenic | 35.0% | |
| GGTCTACTCATAATTGTTGA+GGG | + | chr8.2:80772198-80772217 | MS.gene39280:intron | 35.0% | |
| GGTTATCAGGACAAATACAT+AGG | - | chr8.2:80772473-80772492 | None:intergenic | 35.0% | |
| GTACAAAACATTGAAGCAAC+AGG | - | chr8.2:80771260-80771279 | None:intergenic | 35.0% | |
| GTCTACTCATAATTGTTGAG+GGG | + | chr8.2:80772199-80772218 | MS.gene39280:intron | 35.0% | |
| GTGGAAAATATGAGGGAAAA+TGG | - | chr8.2:80773628-80773647 | None:intergenic | 35.0% | |
| GTGGAAGAAATAGAGGAAAA+TGG | + | chr8.2:80773368-80773387 | MS.gene39280:intron | 35.0% | |
| GTTTAGCTGTAGAAAATGAC+AGG | + | chr8.2:80770426-80770445 | MS.gene39280:intron | 35.0% | |
| TAGACGGATGTCTAATTCTT+AGG | - | chr8.2:80772794-80772813 | None:intergenic | 35.0% | |
| TATACCAAATACAACCTCCA+AGG | - | chr8.2:80773825-80773844 | None:intergenic | 35.0% | |
| TCACTCTTAGAGGTTGTAAT+TGG | + | chr8.2:80772848-80772867 | MS.gene39280:intron | 35.0% | |
| TCGTACAAAAGCTCCTTTAA+CGG | - | chr8.2:80774721-80774740 | None:intergenic | 35.0% | |
| TCTACCATCATTTCTACGAT+AGG | - | chr8.2:80769667-80769686 | None:intergenic | 35.0% | |
| TGCCATGATTACAACTGTAT+AGG | - | chr8.2:80771509-80771528 | None:intergenic | 35.0% | |
| TGCTCAAGCAATAACAATTG+AGG | + | chr8.2:80774330-80774349 | MS.gene39280:CDS | 35.0% | |
| TGCTTGAAAATGGTGATAGA+TGG | + | chr8.2:80774752-80774771 | MS.gene39280:CDS | 35.0% | |
| TTAAATCACTGTGGATGCTT+TGG | + | chr8.2:80770861-80770880 | MS.gene39280:intron | 35.0% | |
| TTGATGCTACGTTCAAAAAC+TGG | - | chr8.2:80770890-80770909 | None:intergenic | 35.0% | |
| ! | AATCGCATGCCATAATTTTG+AGG | - | chr8.2:80770142-80770161 | None:intergenic | 35.0% |
| ! | ACAAGACATAAAGCTTTGGT+AGG | + | chr8.2:80771333-80771352 | MS.gene39280:intron | 35.0% |
| ! | ATCGCATGCCATAATTTTGA+GGG | - | chr8.2:80770141-80770160 | None:intergenic | 35.0% |
| ! | ATTTTCTACAGAGACTCATG+AGG | + | chr8.2:80774559-80774578 | MS.gene39280:CDS | 35.0% |
| ! | CTATTGTGGATTTTGTCAAG+AGG | + | chr8.2:80774496-80774515 | MS.gene39280:CDS | 35.0% |
| ! | CTCAGGAAATAATGGAAGTA+GGG | + | chr8.2:80771728-80771747 | MS.gene39280:intron | 35.0% |
| ! | TAACATTCCATAGTGGGATA+AGG | + | chr8.2:80769824-80769843 | MS.gene39280:intron | 35.0% |
| ! | TATGTTCATCCAATCGATTC+TGG | - | chr8.2:80772117-80772136 | None:intergenic | 35.0% |
| ! | TCAATTGTTATTGCTTGAGC+AGG | - | chr8.2:80774331-80774350 | None:intergenic | 35.0% |
| ! | TCTCAGGAAATAATGGAAGT+AGG | + | chr8.2:80771727-80771746 | MS.gene39280:intron | 35.0% |
| ! | TGGATTAGAAAACGAGTTTC+AGG | - | chr8.2:80772009-80772028 | None:intergenic | 35.0% |
| ! | TGTCTTTTATAACTGTTGGC+TGG | + | chr8.2:80770988-80771007 | MS.gene39280:intron | 35.0% |
| !! | AAGAATATGATAATGGGGGT+GGG | + | chr8.2:80770353-80770372 | MS.gene39280:intron | 35.0% |
| !!! | TTTTTTAGTTCCCCCAAATG+AGG | - | chr8.2:80773442-80773461 | None:intergenic | 35.0% |
| AAAGTTTGGCCCTTCAACAA+TGG | - | chr8.2:80774537-80774556 | None:intergenic | 40.0% | |
| AACAAACCTTAGCCTGTAGT+TGG | + | chr8.2:80772661-80772680 | MS.gene39280:intron | 40.0% | |
| AATGCTATTAGGTGTGTCTC+TGG | + | chr8.2:80772410-80772429 | MS.gene39280:intron | 40.0% | |
| ACAAACCTTAGCCTGTAGTT+GGG | + | chr8.2:80772662-80772681 | MS.gene39280:intron | 40.0% | |
| AGATTTCCGAGCTAAGAATG+CGG | - | chr8.2:80769474-80769493 | None:intergenic | 40.0% | |
| AGCAATAACAATTGAGGCTG+AGG | + | chr8.2:80774336-80774355 | MS.gene39280:CDS | 40.0% | |
| AGCACCTATCGTAGAAATGA+TGG | + | chr8.2:80769660-80769679 | MS.gene39280:intron | 40.0% | |
| ATACACGATTCTGACTACCA+TGG | + | chr8.2:80772259-80772278 | MS.gene39280:intron | 40.0% | |
| ATCTGCTTGTTTGTCCTATG+TGG | - | chr8.2:80772978-80772997 | None:intergenic | 40.0% | |
| ATGAAGCAACAGGAAAATGC+TGG | - | chr8.2:80773178-80773197 | None:intergenic | 40.0% | |
| ATGACCAAGTGCATCTATTG+TGG | + | chr8.2:80774482-80774501 | MS.gene39280:CDS | 40.0% | |
| ATGAGAAGGGAAGACACAAA+AGG | - | chr8.2:80774405-80774424 | None:intergenic | 40.0% | |
| CAACAAAACAATGACGCAAC+AGG | - | chr8.2:80772568-80772587 | None:intergenic | 40.0% | |
| CAACCATTTCCCTATAAGAG+TGG | - | chr8.2:80771802-80771821 | None:intergenic | 40.0% | |
| CACCCCCATTATCATATTCT+TGG | - | chr8.2:80770354-80770373 | None:intergenic | 40.0% | |
| CACCTCTACTCTACCAAATT+AGG | + | chr8.2:80770169-80770188 | MS.gene39280:CDS | 40.0% | |
| CAGCAGATGATTCTACTGAA+AGG | - | chr8.2:80774262-80774281 | None:intergenic | 40.0% | |
| CAGTCTCAAAATATAGGCTG+TGG | + | chr8.2:80772442-80772461 | MS.gene39280:intron | 40.0% | |
| CCAGAAGAAAATATGGAAGC+AGG | + | chr8.2:80771696-80771715 | MS.gene39280:intron | 40.0% | |
| CGCAAAACTCGTGACATAAT+AGG | + | chr8.2:80769594-80769613 | MS.gene39280:intron | 40.0% | |
| CTGACCATTCACATGGTAAT+GGG | - | chr8.2:80770496-80770515 | None:intergenic | 40.0% | |
| CTGCACAACCCTCAAAATTA+TGG | + | chr8.2:80770130-80770149 | MS.gene39280:CDS | 40.0% | |
| CTGTCTCTTCCACTCTTATA+GGG | + | chr8.2:80771790-80771809 | MS.gene39280:intron | 40.0% | |
| CTTATAGGGAAATGGTTGCA+GGG | + | chr8.2:80771804-80771823 | MS.gene39280:intron | 40.0% | |
| CTTCAACAATGGCATCAACT+GGG | - | chr8.2:80774526-80774545 | None:intergenic | 40.0% | |
| CTTCCACTCTTATAGGGAAA+TGG | + | chr8.2:80771796-80771815 | MS.gene39280:intron | 40.0% | |
| GAAAACGAGTTTCAGGGAAT+TGG | - | chr8.2:80772002-80772021 | None:intergenic | 40.0% | |
| GAAAGAGAAACGATCAAGAG+AGG | + | chr8.2:80771750-80771769 | MS.gene39280:intron | 40.0% | |
| GAAATAGAGGAAAATGGGAG+GGG | + | chr8.2:80773374-80773393 | MS.gene39280:intron | 40.0% | |
| GACCTAATTTGGTAGAGTAG+AGG | - | chr8.2:80770174-80770193 | None:intergenic | 40.0% | |
| GAGAAACGACAGACCTAATT+TGG | - | chr8.2:80770185-80770204 | None:intergenic | 40.0% | |
| GATAAAGGCTTTCAGATCTC+AGG | - | chr8.2:80774798-80774817 | None:intergenic | 40.0% | |
| GCAACTTATACTTACGTGCA+TGG | + | chr8.2:80771022-80771041 | MS.gene39280:intron | 40.0% | |
| GGAAAAAAGGAATGAGCAAG+TGG | + | chr8.2:80773349-80773368 | MS.gene39280:intron | 40.0% | |
| GGGTCTACTCATAATTGTTG+AGG | + | chr8.2:80772197-80772216 | MS.gene39280:intron | 40.0% | |
| TACTAAACCCTCCTCATTTG+GGG | + | chr8.2:80773428-80773447 | MS.gene39280:intron | 40.0% | |
| TCAAACTCTCTCACTCTTAG+AGG | + | chr8.2:80772838-80772857 | MS.gene39280:intron | 40.0% | |
| TCATCCTTGGAGGTTGTATT+TGG | + | chr8.2:80773818-80773837 | MS.gene39280:intron | 40.0% | |
| TCTTATAGGGAAATGGTTGC+AGG | + | chr8.2:80771803-80771822 | MS.gene39280:intron | 40.0% | |
| TCTTTAGTTGGACCAGACAT+AGG | + | chr8.2:80773723-80773742 | MS.gene39280:intron | 40.0% | |
| TGAGCAAGTGGAAGAAATAG+AGG | + | chr8.2:80773361-80773380 | MS.gene39280:intron | 40.0% | |
| TGCAGTGCACATTAACTATG+CGG | - | chr8.2:80771881-80771900 | None:intergenic | 40.0% | |
| TGCTTGCAAACTTTGTGAAG+CGG | + | chr8.2:80771151-80771170 | MS.gene39280:CDS | 40.0% | |
| TGTTATGCTTGTTTAGGCTG+TGG | + | chr8.2:80770096-80770115 | MS.gene39280:intron | 40.0% | |
| TTGAGGGGTGGAAAATATGA+GGG | - | chr8.2:80773635-80773654 | None:intergenic | 40.0% | |
| TTTCCCCATTACCATGTGAA+TGG | + | chr8.2:80770489-80770508 | MS.gene39280:intron | 40.0% | |
| TTTGAGGGGTGGAAAATATG+AGG | - | chr8.2:80773636-80773655 | None:intergenic | 40.0% | |
| TTTGTCCTATGTGGCTACAA+CGG | - | chr8.2:80773936-80773955 | None:intergenic | 40.0% | |
| ! | AAAATGACAGGAAAGTGCAC+AGG | + | chr8.2:80770438-80770457 | MS.gene39280:intron | 40.0% |
| ! | CAGTTGATGCCATTGTTGAA+GGG | + | chr8.2:80774525-80774544 | MS.gene39280:CDS | 40.0% |
| ! | CCTGCTTCCATATTTTCTTC+TGG | - | chr8.2:80771699-80771718 | None:intergenic | 40.0% |
| ! | CTCGGTTGTTGTTGTTGTAA+TGG | + | chr8.2:80769847-80769866 | MS.gene39280:intron | 40.0% |
| ! | TGACCATTCACATGGTAATG+GGG | - | chr8.2:80770495-80770514 | None:intergenic | 40.0% |
| !! | AGAGTCTGACAGCCTTATTT+GGG | - | chr8.2:80773799-80773818 | None:intergenic | 40.0% |
| !! | CAAGAATATGATAATGGGGG+TGG | + | chr8.2:80770352-80770371 | MS.gene39280:intron | 40.0% |
| !! | TGGGGATTGGTTTCAATTGT+GGG | - | chr8.2:80772057-80772076 | None:intergenic | 40.0% |
| !! | TTGGGGATTGGTTTCAATTG+TGG | - | chr8.2:80772058-80772077 | None:intergenic | 40.0% |
| AAACCAATCCCCAACCTTAG+AGG | + | chr8.2:80772064-80772083 | MS.gene39280:intron | 45.0% | |
| AAACTCGGCTTAGGTGGTTT+GGG | + | chr8.2:80769686-80769705 | MS.gene39280:intron | 45.0% | |
| AAAGTGAGTGGAGCACATTG+TGG | - | chr8.2:80770472-80770491 | None:intergenic | 45.0% | |
| AACCAATCCCCAACCTTAGA+GGG | + | chr8.2:80772065-80772084 | MS.gene39280:intron | 45.0% | |
| AACTCGCAAACAAAGCCCAA+AGG | - | chr8.2:80773303-80773322 | None:intergenic | 45.0% | |
| ACTAAACCCTCCTCATTTGG+GGG | + | chr8.2:80773429-80773448 | MS.gene39280:intron | 45.0% | |
| AGAAAGGGAGAAACTTGCGA+AGG | + | chr8.2:80770756-80770775 | MS.gene39280:CDS | 45.0% | |
| AGAGCACAATTGAGGAATGC+AGG | - | chr8.2:80774430-80774449 | None:intergenic | 45.0% | |
| AGAGCACAGATGCTACCAAA+TGG | + | chr8.2:80771223-80771242 | MS.gene39280:intron | 45.0% | |
| AGAGGAATCTTACAAGCTGG+CGG | - | chr8.2:80769514-80769533 | None:intergenic | 45.0% | |
| AGATGACCTGTTTCACGTTG+TGG | - | chr8.2:80771973-80771992 | None:intergenic | 45.0% | |
| AGGAATGCAGGGAATGAGAA+GGG | - | chr8.2:80774418-80774437 | None:intergenic | 45.0% | |
| CAAACTCGCAAACAAAGCCT+TGG | + | chr8.2:80773677-80773696 | MS.gene39280:intron | 45.0% | |
| CAGAAGATATCCAACAGGAG+AGG | + | chr8.2:80771118-80771137 | MS.gene39280:CDS | 45.0% | |
| CATTACCCAACTACAGGCTA+AGG | - | chr8.2:80772670-80772689 | None:intergenic | 45.0% | |
| CATTAGACCTCGAACAAGCT+CGG | - | chr8.2:80770927-80770946 | None:intergenic | 45.0% | |
| CCTATAAGAGTGGAAGAGAC+AGG | - | chr8.2:80771792-80771811 | None:intergenic | 45.0% | |
| CCTGTCTCTTCCACTCTTAT+AGG | + | chr8.2:80771789-80771808 | MS.gene39280:intron | 45.0% | |
| CCTTCAACAATGGCATCAAC+TGG | - | chr8.2:80774527-80774546 | None:intergenic | 45.0% | |
| CTAGAGGGATAACATTGCAG+CGG | - | chr8.2:80772340-80772359 | None:intergenic | 45.0% | |
| CTCAATGGGCCTTTCTCAAA+TGG | - | chr8.2:80771071-80771090 | None:intergenic | 45.0% | |
| CTCGCAAAGTTTCCTATGTC+TGG | - | chr8.2:80773738-80773757 | None:intergenic | 45.0% | |
| GAAGGGAAGACACAAAAGGT+AGG | - | chr8.2:80774401-80774420 | None:intergenic | 45.0% | |
| GAGCACAATTGAGGAATGCA+GGG | - | chr8.2:80774429-80774448 | None:intergenic | 45.0% | |
| GATGACCTGTTTCACGTTGT+GGG | - | chr8.2:80771972-80771991 | None:intergenic | 45.0% | |
| GCACTCAGAAGATATCCAAC+AGG | + | chr8.2:80771113-80771132 | MS.gene39280:CDS | 45.0% | |
| GCTGACCATTCACATGGTAA+TGG | - | chr8.2:80770497-80770516 | None:intergenic | 45.0% | |
| TAGTTAATGTGCACTGCACG+TGG | + | chr8.2:80771883-80771902 | MS.gene39280:intron | 45.0% | |
| TCAAAGAAGACCCGTTTCAG+AGG | - | chr8.2:80772034-80772053 | None:intergenic | 45.0% | |
| TCCTACGTTGCTACACTAGA+GGG | - | chr8.2:80772355-80772374 | None:intergenic | 45.0% | |
| TGATGGTAGAAACTCGGCTT+AGG | + | chr8.2:80769677-80769696 | MS.gene39280:intron | 45.0% | |
| TTACCATGTGAATGGTCAGC+CGG | + | chr8.2:80770497-80770516 | MS.gene39280:intron | 45.0% | |
| TTACTGACCGAGTTGTCCTA+CGG | - | chr8.2:80774378-80774397 | None:intergenic | 45.0% | |
| TTAGTTCCCCCAAATGAGGA+GGG | - | chr8.2:80773438-80773457 | None:intergenic | 45.0% | |
| ! | AACGATCAAGAGAGGTGTAG+TGG | + | chr8.2:80771758-80771777 | MS.gene39280:intron | 45.0% |
| ! | ACCGGTGGATTCTGTAGTAA+GGG | + | chr8.2:80769723-80769742 | MS.gene39280:intron | 45.0% |
| ! | CAGGAAAATGCTGTGCCATT+TGG | - | chr8.2:80771241-80771260 | None:intergenic | 45.0% |
| ! | CCAGTTGATGCCATTGTTGA+AGG | + | chr8.2:80774524-80774543 | MS.gene39280:CDS | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | - | chr8.2:80773327-80773308 | None:intergenic | 45.0% |
| ! | TCTAATCCACGCCTCTGAAA+CGG | + | chr8.2:80772020-80772039 | MS.gene39280:intron | 45.0% |
| ! | TTCCATAGTGGGATAAGGCT+CGG | + | chr8.2:80769829-80769848 | MS.gene39280:intron | 45.0% |
| ! | TTTAGTTCCCCCAAATGAGG+AGG | - | chr8.2:80773439-80773458 | None:intergenic | 45.0% |
| !! | ATGGTAATGGGGAAAGTGAG+TGG | - | chr8.2:80770484-80770503 | None:intergenic | 45.0% |
| !! | CAAGGCTTTGTTTGCGAGTT+TGG | - | chr8.2:80773679-80773698 | None:intergenic | 45.0% |
| !! | GAGAGTCTGACAGCCTTATT+TGG | - | chr8.2:80773800-80773819 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | - | chr8.2:80773326-80773307 | None:intergenic | 45.0% |
| !! | TATGATAATGGGGGTGGGTT+TGG | + | chr8.2:80770358-80770377 | MS.gene39280:intron | 45.0% |
| !! | TTGGGCTTTGTTTGCGAGTT+TGG | + | chr8.2:80773303-80773322 | MS.gene39280:intron | 45.0% |
| AAACCGCAGAGGACGAAGAA+AGG | + | chr8.2:80770740-80770759 | MS.gene39280:intron | 50.0% | |
| AACCGCAGAGGACGAAGAAA+GGG | + | chr8.2:80770741-80770760 | MS.gene39280:intron | 50.0% | |
| AAGCGGGATACACACAAGTC+CGG | - | chr8.2:80770519-80770538 | None:intergenic | 50.0% | |
| AGAGAGAGACAGAGAGAGTC+AGG | + | chr8.2:80769635-80769654 | MS.gene39280:intron | 50.0% | |
| AGCTATTAGGCGTGTGTCAC+TGG | + | chr8.2:80773989-80774008 | MS.gene39280:intron | 50.0% | |
| AGGGAAATGGTTGCAGGGTA+GGG | + | chr8.2:80771809-80771828 | MS.gene39280:intron | 50.0% | |
| AGGGGAAGGCTTGGGAAAAA+AGG | + | chr8.2:80773336-80773355 | MS.gene39280:intron | 50.0% | |
| AGGGGAAGGGAAGACTTTGA+GGG | - | chr8.2:80773651-80773670 | None:intergenic | 50.0% | |
| ATAGAGGAAAATGGGAGGGG+AGG | + | chr8.2:80773377-80773396 | MS.gene39280:intron | 50.0% | |
| ATGCAACGTTCCTCTCCTGT+TGG | - | chr8.2:80771131-80771150 | None:intergenic | 50.0% | |
| ATGCTTGTTTAGGCTGTGGC+AGG | + | chr8.2:80770100-80770119 | MS.gene39280:intron | 50.0% | |
| ATTGAGTCCTCGTTTCCGTG+GGG | + | chr8.2:80771085-80771104 | MS.gene39280:CDS | 50.0% | |
| CAACAATGGAACTCGCCACA+GGG | - | chr8.2:80772091-80772110 | None:intergenic | 50.0% | |
| CACGGAAACGAGGACTCAAT+GGG | - | chr8.2:80771085-80771104 | None:intergenic | 50.0% | |
| CATTGAGTCCTCGTTTCCGT+GGG | + | chr8.2:80771084-80771103 | MS.gene39280:CDS | 50.0% | |
| CCCCTTACTACAGAATCCAC+CGG | - | chr8.2:80769727-80769746 | None:intergenic | 50.0% | |
| CTCGCAAACAAAGCCTTGGT+AGG | + | chr8.2:80773681-80773700 | MS.gene39280:intron | 50.0% | |
| GAAACTCGGCTTAGGTGGTT+TGG | + | chr8.2:80769685-80769704 | MS.gene39280:intron | 50.0% | |
| GAAGCAGGAGAAAGGATCTC+AGG | + | chr8.2:80771711-80771730 | MS.gene39280:intron | 50.0% | |
| GAGAGAGACAGAGAGAGTCA+GGG | + | chr8.2:80769636-80769655 | MS.gene39280:intron | 50.0% | |
| GAGGAATCTTACAAGCTGGC+GGG | - | chr8.2:80769513-80769532 | None:intergenic | 50.0% | |
| GAGGAATGCAGGGAATGAGA+AGG | - | chr8.2:80774419-80774438 | None:intergenic | 50.0% | |
| GCACTGCAACATTATCCCTC+TGG | + | chr8.2:80772947-80772966 | MS.gene39280:intron | 50.0% | |
| GGTAGGGGAAAGTAACGGTA+AGG | + | chr8.2:80771825-80771844 | MS.gene39280:intron | 50.0% | |
| GTCCTACGTTGCTACACTAG+AGG | - | chr8.2:80772356-80772375 | None:intergenic | 50.0% | |
| GTGGATTCTGTAGTAAGGGG+AGG | + | chr8.2:80769727-80769746 | MS.gene39280:intron | 50.0% | |
| TAGAGGAAAATGGGAGGGGA+GGG | + | chr8.2:80773378-80773397 | MS.gene39280:intron | 50.0% | |
| TAGGGAAATGGTTGCAGGGT+AGG | + | chr8.2:80771808-80771827 | MS.gene39280:intron | 50.0% | |
| TCCATCCGTTGTAGCCACAT+AGG | + | chr8.2:80773928-80773947 | MS.gene39280:intron | 50.0% | |
| TCCCTCTAGTGTAGCAACGT+AGG | + | chr8.2:80772351-80772370 | MS.gene39280:intron | 50.0% | |
| TCCTATGTGGCTACAACGGA+TGG | - | chr8.2:80773932-80773951 | None:intergenic | 50.0% | |
| TCCTATGTGGCTACACCAGA+GGG | - | chr8.2:80772965-80772984 | None:intergenic | 50.0% | |
| TCTGACCCACAACGTGAAAC+AGG | + | chr8.2:80771964-80771983 | MS.gene39280:intron | 50.0% | |
| TGCAGGGTAGGGGAAAGTAA+CGG | + | chr8.2:80771820-80771839 | MS.gene39280:intron | 50.0% | |
| TGGGCATGTAGAGAGAAGAC+CGG | + | chr8.2:80769705-80769724 | MS.gene39280:intron | 50.0% | |
| TGGTAGAAACTCGGCTTAGG+TGG | + | chr8.2:80769680-80769699 | MS.gene39280:intron | 50.0% | |
| TGTCAGACTCTCATCCTTGG+AGG | + | chr8.2:80773808-80773827 | MS.gene39280:intron | 50.0% | |
| TGTGGCGAGTTCCATTGTTG+CGG | + | chr8.2:80772091-80772110 | MS.gene39280:intron | 50.0% | |
| TTCTGAGTGCATGTTCCCCA+CGG | - | chr8.2:80771103-80771122 | None:intergenic | 50.0% | |
| TTGTTGCGGCCAGAATCGAT+TGG | + | chr8.2:80772105-80772124 | MS.gene39280:intron | 50.0% | |
| TTTAGGCTGTGGCAGGTCAA+GGG | + | chr8.2:80770107-80770126 | MS.gene39280:intron | 50.0% | |
| ! | AACCGAGCCTTATCCCACTA+TGG | - | chr8.2:80769834-80769853 | None:intergenic | 50.0% |
| ! | ATCGATTCTGGCCGCAACAA+TGG | - | chr8.2:80772105-80772124 | None:intergenic | 50.0% |
| ! | CCGGTGGATTCTGTAGTAAG+GGG | + | chr8.2:80769724-80769743 | MS.gene39280:intron | 50.0% |
| ! | GACCGGTGGATTCTGTAGTA+AGG | + | chr8.2:80769722-80769741 | MS.gene39280:intron | 50.0% |
| ! | TTTCTCACCGAGCTTGTTCG+AGG | + | chr8.2:80770917-80770936 | MS.gene39280:CDS | 50.0% |
| !! | CTAATCCACGCCTCTGAAAC+GGG | + | chr8.2:80772021-80772040 | MS.gene39280:intron | 50.0% |
| !! | GATGGGATTTTGAGGAGCTG+TGG | - | chr8.2:80770548-80770567 | None:intergenic | 50.0% |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | + | chr8.2:80773306-80773325 | MS.gene39280:intron | 50.0% |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | - | chr8.2:80773325-80773306 | None:intergenic | 50.0% |
| !!! | AGGAGGGTTTTGAGGGGTTT+TGG | + | chr8.2:80773471-80773490 | MS.gene39280:intron | 50.0% |
| !!! | AGGGTTTTGAGGGGTTTTGG+AGG | + | chr8.2:80773474-80773493 | MS.gene39280:intron | 50.0% |
| !!! | GGGTTTTGAGGGGTTTTGGA+GGG | + | chr8.2:80773475-80773494 | MS.gene39280:intron | 50.0% |
| AAAATGGGAGGGGAGGGCTT+TGG | + | chr8.2:80773384-80773403 | MS.gene39280:intron | 55.0% | |
| AAATGGGAGGGGAGGGCTTT+GGG | + | chr8.2:80773385-80773404 | MS.gene39280:intron | 55.0% | |
| AGGAGCTGTGGTGAACCAAG+CGG | - | chr8.2:80770536-80770555 | None:intergenic | 55.0% | |
| AGTCCGGCTGACCATTCACA+TGG | - | chr8.2:80770503-80770522 | None:intergenic | 55.0% | |
| ATGGCAGCCGTAGGACAACT+CGG | + | chr8.2:80774368-80774387 | MS.gene39280:CDS | 55.0% | |
| CCACGGAAACGAGGACTCAA+TGG | - | chr8.2:80771086-80771105 | None:intergenic | 55.0% | |
| CCATTGAGTCCTCGTTTCCG+TGG | + | chr8.2:80771083-80771102 | MS.gene39280:CDS | 55.0% | |
| CGAGTTTGGAGGCGAAGAGA+GGG | + | chr8.2:80773317-80773336 | MS.gene39280:intron | 55.0% | |
| CTCCCTTTCTTCGTCCTCTG+CGG | - | chr8.2:80770746-80770765 | None:intergenic | 55.0% | |
| GAGGGGAAGGGAAGACTTTG+AGG | - | chr8.2:80773652-80773671 | None:intergenic | 55.0% | |
| GAGTTTGGAGGCGAAGAGAG+GGG | + | chr8.2:80773318-80773337 | MS.gene39280:intron | 55.0% | |
| GCAACAATGGAACTCGCCAC+AGG | - | chr8.2:80772092-80772111 | None:intergenic | 55.0% | |
| GCATGTAGAGAGAAGACCGG+TGG | + | chr8.2:80769708-80769727 | MS.gene39280:intron | 55.0% | |
| GGACTTGTGTGTATCCCGCT+TGG | + | chr8.2:80770518-80770537 | MS.gene39280:intron | 55.0% | |
| GGCTGTCAGACTCTCATCCT+TGG | + | chr8.2:80773805-80773824 | MS.gene39280:intron | 55.0% | |
| GGGAAATGGTTGCAGGGTAG+GGG | + | chr8.2:80771810-80771829 | MS.gene39280:intron | 55.0% | |
| GGGGAAGGGAAGACTTTGAG+GGG | - | chr8.2:80773650-80773669 | None:intergenic | 55.0% | |
| GTCCTATGTGGCTACACCAG+AGG | - | chr8.2:80772966-80772985 | None:intergenic | 55.0% | |
| GTTTAGGCTGTGGCAGGTCA+AGG | + | chr8.2:80770106-80770125 | MS.gene39280:intron | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+GGG | - | chr8.2:80773670-80773689 | None:intergenic | 55.0% | |
| TCCCTCTGGTGTAGCCACAT+AGG | + | chr8.2:80772961-80772980 | MS.gene39280:intron | 55.0% | |
| TGTTTGCGAGTTTGGAGGGG+AGG | - | chr8.2:80773671-80773690 | None:intergenic | 55.0% | |
| TTTGCGAGTTTGGAGGGGAG+GGG | - | chr8.2:80773669-80773688 | None:intergenic | 55.0% | |
| ! | GAAGGGAAGACTTTGAGGGG+TGG | - | chr8.2:80773647-80773666 | None:intergenic | 55.0% |
| AATGGGAGGGGAGGGCTTTG+GGG | + | chr8.2:80773386-80773405 | MS.gene39280:intron | 60.0% | |
| AGCGTGAAGATGGCAGCCGT+AGG | + | chr8.2:80774359-80774378 | MS.gene39280:CDS | 60.0% | |
| GAAGACCCGTTTCAGAGGCG+TGG | - | chr8.2:80772029-80772048 | None:intergenic | 60.0% | |
| GAGTTTGGAGGGGAGGGGAA+GGG | - | chr8.2:80773664-80773683 | None:intergenic | 60.0% | |
| GCATGTTCCCCACGGAAACG+AGG | - | chr8.2:80771095-80771114 | None:intergenic | 60.0% | |
| GCGAAGAGAGGGGAAGGCTT+GGG | + | chr8.2:80773328-80773347 | MS.gene39280:intron | 60.0% | |
| GCGAGTTTGGAGGCGAAGAG+AGG | + | chr8.2:80773316-80773335 | MS.gene39280:intron | 60.0% | |
| GGAGCTGTGGTGAACCAAGC+GGG | - | chr8.2:80770535-80770554 | None:intergenic | 60.0% | |
| TTGGAGGCGAAGAGAGGGGA+AGG | + | chr8.2:80773322-80773341 | MS.gene39280:intron | 60.0% | |
| ! | GAGGCTGAGGAGCGTGAAGA+TGG | + | chr8.2:80774349-80774368 | MS.gene39280:CDS | 60.0% |
| !! | CACAGGGCCCTCTAAGGTTG+GGG | - | chr8.2:80772075-80772094 | None:intergenic | 60.0% |
| !! | CCACAGGGCCCTCTAAGGTT+GGG | - | chr8.2:80772076-80772095 | None:intergenic | 60.0% |
| !! | GGCCCTCTAAGGTTGGGGAT+TGG | - | chr8.2:80772070-80772089 | None:intergenic | 60.0% |
| ACTCGCCACAGGGCCCTCTA+AGG | - | chr8.2:80772081-80772100 | None:intergenic | 65.0% | |
| CCCAACCTTAGAGGGCCCTG+TGG | + | chr8.2:80772073-80772092 | MS.gene39280:intron | 65.0% | |
| CGAGTTTGGAGGGGAGGGGA+AGG | - | chr8.2:80773665-80773684 | None:intergenic | 65.0% | |
| GGCGAAGAGAGGGGAAGGCT+TGG | + | chr8.2:80773327-80773346 | MS.gene39280:intron | 65.0% | |
| ! | ATGGGAGGGGAGGGCTTTGG+GGG | + | chr8.2:80773387-80773406 | MS.gene39280:intron | 65.0% |
| !! | GCCACAGGGCCCTCTAAGGT+TGG | - | chr8.2:80772077-80772096 | None:intergenic | 65.0% |
| !! | TGGGAGGGGAGGGCTTTGGG+GGG | + | chr8.2:80773388-80773407 | MS.gene39280:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 80769467 | 80774822 | 80769467 | ID=MS.gene39280 |
| chr8.2 | mRNA | 80769467 | 80774822 | 80769467 | ID=MS.gene39280.t1;Parent=MS.gene39280 |
| chr8.2 | exon | 80769467 | 80769520 | 80769467 | ID=MS.gene39280.t1.exon1;Parent=MS.gene39280.t1 |
| chr8.2 | CDS | 80769467 | 80769520 | 80769467 | ID=cds.MS.gene39280.t1;Parent=MS.gene39280.t1 |
| chr8.2 | exon | 80770112 | 80770190 | 80770112 | ID=MS.gene39280.t1.exon2;Parent=MS.gene39280.t1 |
| chr8.2 | CDS | 80770112 | 80770190 | 80770112 | ID=cds.MS.gene39280.t1;Parent=MS.gene39280.t1 |
| chr8.2 | exon | 80770749 | 80770802 | 80770749 | ID=MS.gene39280.t1.exon3;Parent=MS.gene39280.t1 |
| chr8.2 | CDS | 80770749 | 80770802 | 80770749 | ID=cds.MS.gene39280.t1;Parent=MS.gene39280.t1 |
| chr8.2 | exon | 80770891 | 80770982 | 80770891 | ID=MS.gene39280.t1.exon4;Parent=MS.gene39280.t1 |
| chr8.2 | CDS | 80770891 | 80770982 | 80770891 | ID=cds.MS.gene39280.t1;Parent=MS.gene39280.t1 |
| chr8.2 | exon | 80771059 | 80771172 | 80771059 | ID=MS.gene39280.t1.exon5;Parent=MS.gene39280.t1 |
| chr8.2 | CDS | 80771059 | 80771172 | 80771059 | ID=cds.MS.gene39280.t1;Parent=MS.gene39280.t1 |
| chr8.2 | exon | 80774322 | 80774389 | 80774322 | ID=MS.gene39280.t1.exon6;Parent=MS.gene39280.t1 |
| chr8.2 | CDS | 80774322 | 80774389 | 80774322 | ID=cds.MS.gene39280.t1;Parent=MS.gene39280.t1 |
| chr8.2 | exon | 80774469 | 80774580 | 80774469 | ID=MS.gene39280.t1.exon7;Parent=MS.gene39280.t1 |
| chr8.2 | CDS | 80774469 | 80774580 | 80774469 | ID=cds.MS.gene39280.t1;Parent=MS.gene39280.t1 |
| chr8.2 | exon | 80774727 | 80774822 | 80774727 | ID=MS.gene39280.t1.exon8;Parent=MS.gene39280.t1 |
| chr8.2 | CDS | 80774727 | 80774822 | 80774727 | ID=cds.MS.gene39280.t1;Parent=MS.gene39280.t1 |
| Gene Sequence |
| Protein sequence |
