Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39791.t1 | XP_003617136.1 | 99.3 | 276 | 2 | 0 | 1 | 276 | 1 | 276 | 2.00E-156 | 561.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39791.t1 | Q84VQ1 | 68.2 | 233 | 72 | 2 | 44 | 276 | 53 | 283 | 3.3e-91 | 336.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39791.t1 | Q7XYX8 | 99.3 | 276 | 2 | 0 | 1 | 276 | 1 | 276 | 1.4e-156 | 561.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049134 | MS.gene39791 | 0.808309 | 3.30E-50 | -1.69E-46 |
| MS.gene04933 | MS.gene39791 | -0.807081 | 6.02E-50 | -1.69E-46 |
| MS.gene049378 | MS.gene39791 | -0.816352 | 5.78E-52 | -1.69E-46 |
| MS.gene050787 | MS.gene39791 | -0.825447 | 4.66E-54 | -1.69E-46 |
| MS.gene051860 | MS.gene39791 | -0.804713 | 1.89E-49 | -1.69E-46 |
| MS.gene052011 | MS.gene39791 | 0.832655 | 8.35E-56 | -1.69E-46 |
| MS.gene052389 | MS.gene39791 | -0.809995 | 1.44E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene39791 | -0.800736 | 1.25E-48 | -1.69E-46 |
| MS.gene054183 | MS.gene39791 | -0.826125 | 3.22E-54 | -1.69E-46 |
| MS.gene054291 | MS.gene39791 | 0.818628 | 1.77E-52 | -1.69E-46 |
| MS.gene054468 | MS.gene39791 | -0.823079 | 1.68E-53 | -1.69E-46 |
| MS.gene054473 | MS.gene39791 | -0.800366 | 1.49E-48 | -1.69E-46 |
| MS.gene058739 | MS.gene39791 | -0.811555 | 6.60E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene39791 | -0.805085 | 1.58E-49 | -1.69E-46 |
| MS.gene061040 | MS.gene39791 | 0.819663 | 1.03E-52 | -1.69E-46 |
| MS.gene061114 | MS.gene39791 | 0.854525 | 1.16E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39791.t1 | MTR_5g088270 | 99.275 | 276 | 2 | 0 | 1 | 276 | 1 | 276 | 0.0 | 561 |
| MS.gene39791.t1 | MTR_2g026695 | 50.617 | 243 | 117 | 1 | 37 | 276 | 45 | 287 | 9.50e-81 | 245 |
| MS.gene39791.t1 | MTR_4g133970 | 52.632 | 228 | 100 | 5 | 56 | 276 | 13 | 239 | 6.29e-69 | 213 |
| MS.gene39791.t1 | MTR_5g098510 | 41.146 | 192 | 103 | 4 | 89 | 276 | 42 | 227 | 2.68e-38 | 134 |
| MS.gene39791.t1 | MTR_5g098510 | 41.146 | 192 | 103 | 4 | 89 | 276 | 87 | 272 | 5.28e-38 | 135 |
| MS.gene39791.t1 | MTR_5g098510 | 41.146 | 192 | 103 | 4 | 89 | 276 | 119 | 304 | 1.92e-37 | 134 |
| MS.gene39791.t1 | MTR_0446s0050 | 54.630 | 108 | 46 | 2 | 172 | 276 | 1 | 108 | 1.15e-26 | 100 |
| MS.gene39791.t1 | MTR_2g095290 | 45.455 | 99 | 52 | 2 | 180 | 276 | 25 | 123 | 2.07e-20 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39791.t1 | AT5G21170 | 61.724 | 290 | 90 | 4 | 1 | 276 | 1 | 283 | 4.24e-113 | 327 |
| MS.gene39791.t1 | AT5G21170 | 68.037 | 219 | 68 | 2 | 58 | 276 | 23 | 239 | 1.19e-108 | 314 |
| MS.gene39791.t1 | AT5G21170 | 68.037 | 219 | 68 | 2 | 58 | 276 | 104 | 320 | 4.82e-108 | 316 |
| MS.gene39791.t1 | AT2G28060 | 47.423 | 97 | 50 | 1 | 180 | 276 | 13 | 108 | 1.65e-22 | 90.1 |
| MS.gene39791.t1 | AT2G28060 | 47.423 | 97 | 50 | 1 | 180 | 276 | 13 | 108 | 1.65e-22 | 90.1 |
| MS.gene39791.t1 | AT2G28060 | 47.423 | 97 | 50 | 1 | 180 | 276 | 13 | 108 | 1.65e-22 | 90.1 |
| MS.gene39791.t1 | AT2G28060 | 47.423 | 97 | 50 | 1 | 180 | 276 | 13 | 108 | 1.65e-22 | 90.1 |
Find 90 sgRNAs with CRISPR-Local
Find 467 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAACTCAGACACACTTTC+AGG | 0.198492 | 5.4:-69416426 | None:intergenic |
| GTTATGATCACTTGGAATTA+TGG | 0.209238 | 5.4:+69414849 | MS.gene39791:CDS |
| CATCAGGTATATTTCATTAC+AGG | 0.251464 | 5.4:+69415060 | MS.gene39791:CDS |
| TGGAGGGATCCTGGGATAAC+TGG | 0.268823 | 5.4:+69414889 | MS.gene39791:CDS |
| GCTTGACCATAACTAGATTC+TGG | 0.316796 | 5.4:-69416462 | None:intergenic |
| TAATTCCAAGTGATCATAAC+AGG | 0.345237 | 5.4:-69414846 | None:intergenic |
| GTGTGGCTGTGGAGGGATCC+TGG | 0.375283 | 5.4:+69414880 | MS.gene39791:CDS |
| CTAGAACGACGAGGACTTTG+AGG | 0.403810 | 5.4:-69410432 | None:intergenic |
| TTTGCAAAGTCTTCCTCAGC+TGG | 0.416645 | 5.4:-69416489 | None:intergenic |
| CTTGACCATAACTAGATTCT+GGG | 0.418244 | 5.4:-69416461 | None:intergenic |
| TCTAGATCGCCGATCCTCTT+CGG | 0.421408 | 5.4:+69410450 | MS.gene39791:CDS |
| GCCGATCCTCTTCGGTCCTC+AGG | 0.427622 | 5.4:+69410458 | MS.gene39791:CDS |
| CAAACTCAGACACACTTTCA+GGG | 0.439883 | 5.4:-69416425 | None:intergenic |
| AGGACTTTGAGGCGGACTAT+TGG | 0.442021 | 5.4:-69410421 | None:intergenic |
| CCCGACGCCGGTGATCCTTC+CGG | 0.443442 | 5.4:+69410345 | MS.gene39791:CDS |
| CAGCTGCATCTTACAGTCCT+AGG | 0.454992 | 5.4:+69416534 | MS.gene39791:CDS |
| TTGCCATGGGAGTGACTCAC+AGG | 0.457040 | 5.4:+69416652 | MS.gene39791:CDS |
| TGCCACATTTGATTGAGAAA+AGG | 0.464113 | 5.4:-69414777 | None:intergenic |
| CCTGGGATAACTGGGCATCT+AGG | 0.465084 | 5.4:+69414898 | MS.gene39791:CDS |
| TGAAAGTGTGTCTGAGTTTG+AGG | 0.478143 | 5.4:+69416428 | MS.gene39791:CDS |
| GGGCCGTTACCTCTTTGTAA+TGG | 0.478902 | 5.4:-69414753 | None:intergenic |
| CCCATCTCATCAGCTACATA+AGG | 0.479081 | 5.4:-69415122 | None:intergenic |
| ACCTCTTGAGAGGTTTGTAA+AGG | 0.484885 | 5.4:-69416701 | None:intergenic |
| CCCTCCCCAGAATCTAGTTA+TGG | 0.487999 | 5.4:+69416456 | MS.gene39791:CDS |
| TGGTGAACAAAGATATATTC+CGG | 0.490993 | 5.4:+69415094 | MS.gene39791:CDS |
| CCTTATGTAGCTGATGAGAT+GGG | 0.495519 | 5.4:+69415122 | MS.gene39791:CDS |
| CCGGAAGGATCACCGGCGTC+GGG | 0.498456 | 5.4:-69410345 | None:intergenic |
| CTCAAAATCTGTTGTTGCCA+TGG | 0.498636 | 5.4:+69416638 | MS.gene39791:CDS |
| ATTCTTATAGTCCTCCCATC+AGG | 0.502622 | 5.4:+69415044 | MS.gene39791:CDS |
| TCAGCTACATAAGGAAGATC+CGG | 0.505471 | 5.4:-69415113 | None:intergenic |
| CATTACAGGTTCATTGTCGA+TGG | 0.509758 | 5.4:+69415074 | MS.gene39791:CDS |
| AACAATATGGGAAACGCTAA+CGG | 0.513258 | 5.4:+69410303 | None:intergenic |
| TGTGGCTGTGGAGGGATCCT+GGG | 0.513789 | 5.4:+69414881 | MS.gene39791:CDS |
| GGAGGGATCCTGGGATAACT+GGG | 0.514253 | 5.4:+69414890 | MS.gene39791:CDS |
| CGGACTATTGGCCATTGAAT+CGG | 0.516627 | 5.4:-69410409 | None:intergenic |
| ACCTGAGGACCGAAGAGGAT+CGG | 0.523080 | 5.4:-69410459 | None:intergenic |
| GGTATTGCAGCGAGGTGGCA+AGG | 0.529058 | 5.4:+69415013 | MS.gene39791:CDS |
| CACATTTGATTGAGAAAAGG+AGG | 0.534271 | 5.4:-69414774 | None:intergenic |
| TCCTTATGTAGCTGATGAGA+TGG | 0.535986 | 5.4:+69415121 | MS.gene39791:CDS |
| AGCTGCGAAGGAACAGCCAT+TGG | 0.538490 | 5.4:-69416516 | None:intergenic |
| AACGCTAACGGAAGAGAAGA+CGG | 0.542108 | 5.4:+69410315 | MS.gene39791:CDS |
| TCAAAATCTGTTGTTGCCAT+GGG | 0.544837 | 5.4:+69416639 | MS.gene39791:CDS |
| CTGTAATGAAATATACCTGA+TGG | 0.547195 | 5.4:-69415059 | None:intergenic |
| TTCACGACCGGAAGGATCAC+CGG | 0.549050 | 5.4:-69410352 | None:intergenic |
| ACCGGAAGGATCACCGGCGT+CGG | 0.549498 | 5.4:-69410346 | None:intergenic |
| TGGAGGTAACAGTGTGGCTG+TGG | 0.550105 | 5.4:+69414869 | MS.gene39791:CDS |
| GAATCCCTGTTATGATCACT+TGG | 0.552743 | 5.4:+69414841 | MS.gene39791:CDS |
| CGAATAGGAGGTGGCGCGTG+AGG | 0.554867 | 5.4:-69410375 | None:intergenic |
| ATAACAGGGATTCCTTGCTC+AGG | 0.559506 | 5.4:-69414831 | None:intergenic |
| CAACTGTCACATATTTCGAC+TGG | 0.562286 | 5.4:-69416677 | None:intergenic |
| GGTAACAGTGTGGCTGTGGA+GGG | 0.563941 | 5.4:+69414873 | MS.gene39791:CDS |
| TCCTTTACAAACCTCTCAAG+AGG | 0.566470 | 5.4:+69416700 | MS.gene39791:CDS |
| ACTGTAAGATGCAGCTGCGA+AGG | 0.575116 | 5.4:-69416528 | None:intergenic |
| CATCAGCGTTCTCCATGCCT+AGG | 0.578578 | 5.4:-69416551 | None:intergenic |
| CCTCTTTGTAATGGAGCTAG+AGG | 0.578932 | 5.4:-69414744 | None:intergenic |
| ACATGTTGAGGCTTTGAAGA+GGG | 0.581687 | 5.4:-69416579 | None:intergenic |
| GTTAATCAAGCTCCTGAGCA+AGG | 0.584602 | 5.4:+69414819 | MS.gene39791:CDS |
| AGGTAACAGTGTGGCTGTGG+AGG | 0.586001 | 5.4:+69414872 | MS.gene39791:CDS |
| TGTAATGAAATATACCTGAT+GGG | 0.586361 | 5.4:-69415058 | None:intergenic |
| AGACTTTGCAAAAGAGCCAA+TGG | 0.589225 | 5.4:+69416500 | MS.gene39791:CDS |
| TGATTTAGCACAACATGTTG+AGG | 0.589623 | 5.4:-69416591 | None:intergenic |
| CCTAGATGCCCAGTTATCCC+AGG | 0.593659 | 5.4:-69414898 | None:intergenic |
| TCACATATTTACCTCTTGAG+AGG | 0.598865 | 5.4:-69416711 | None:intergenic |
| GGCATGGAGAACGCTGATGT+CGG | 0.607321 | 5.4:+69416555 | MS.gene39791:CDS |
| GCATCTTACAGTCCTAGGCA+TGG | 0.612059 | 5.4:+69416539 | MS.gene39791:CDS |
| CCATAACTAGATTCTGGGGA+GGG | 0.614018 | 5.4:-69416456 | None:intergenic |
| GACGGACAAATTCCCGACGC+CGG | 0.618565 | 5.4:+69410333 | MS.gene39791:CDS |
| GCTCCATTACAAAGAGGTAA+CGG | 0.620004 | 5.4:+69414750 | MS.gene39791:CDS |
| AACATGTTGAGGCTTTGAAG+AGG | 0.620499 | 5.4:-69416580 | None:intergenic |
| ATGATCACTTGGAATTATGG+AGG | 0.622429 | 5.4:+69414852 | MS.gene39791:CDS |
| TGGCGCGTGAGGTTCACGAC+CGG | 0.625510 | 5.4:-69410364 | None:intergenic |
| ATGTGGCAGAATGAGCCTCA+TGG | 0.626254 | 5.4:+69414792 | MS.gene39791:CDS |
| CCTCTAGCTCCATTACAAAG+AGG | 0.626799 | 5.4:+69414744 | MS.gene39791:CDS |
| TAACTAGATTCTGGGGAGGG+TGG | 0.630608 | 5.4:-69416453 | None:intergenic |
| GCGTGAGGTTCACGACCGGA+AGG | 0.633347 | 5.4:-69410360 | None:intergenic |
| ACATTTGATTGAGAAAAGGA+GGG | 0.635035 | 5.4:-69414773 | None:intergenic |
| CTTATGTAGCTGATGAGATG+GGG | 0.635358 | 5.4:+69415123 | MS.gene39791:CDS |
| GAACCTGTGAGTCACTCCCA+TGG | 0.651519 | 5.4:-69416655 | None:intergenic |
| ACCATAACTAGATTCTGGGG+AGG | 0.658558 | 5.4:-69416457 | None:intergenic |
| TGGTCAAGCATATCCAGCTG+AGG | 0.675215 | 5.4:+69416476 | MS.gene39791:CDS |
| GAACGACGAGGACTTTGAGG+CGG | 0.686219 | 5.4:-69410429 | None:intergenic |
| TGCAGGAAGGTATTGCAGCG+AGG | 0.689831 | 5.4:+69415005 | MS.gene39791:intron |
| AGCGAACCTGAGGACCGAAG+AGG | 0.695965 | 5.4:-69410464 | None:intergenic |
| AGGAAGGTATTGCAGCGAGG+TGG | 0.696393 | 5.4:+69415008 | MS.gene39791:intron |
| TTGACCATAACTAGATTCTG+GGG | 0.696722 | 5.4:-69416460 | None:intergenic |
| AATTCCAAGTGATCATAACA+GGG | 0.702266 | 5.4:-69414845 | None:intergenic |
| AATGAAATATACCTGATGGG+AGG | 0.706670 | 5.4:-69415055 | None:intergenic |
| GCTTGATTAACAATACCATG+AGG | 0.767552 | 5.4:-69414807 | None:intergenic |
| ATCGGCGATCTAGAACGACG+AGG | 0.792554 | 5.4:-69410441 | None:intergenic |
| GAATTATGGAGGTAACAGTG+TGG | 0.820985 | 5.4:+69414863 | MS.gene39791:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACCTTTTTTTATATTTTTT+TGG | + | chr5.4:69413226-69413245 | MS.gene39791:intron | 10.0% |
| !! | AAACATTTATTACAATTACA+AGG | - | chr5.4:69416246-69416265 | None:intergenic | 15.0% |
| !! | AATTTCATTTCATAATGAAA+AGG | - | chr5.4:69415243-69415262 | None:intergenic | 15.0% |
| !! | AGCCAAAAAAATATAAAAAA+AGG | - | chr5.4:69413231-69413250 | None:intergenic | 15.0% |
| !! | CAGACAAAATAAATATTAAT+TGG | - | chr5.4:69413950-69413969 | None:intergenic | 15.0% |
| !! | CATAATTAAAAACTAAACAT+AGG | + | chr5.4:69414699-69414718 | MS.gene39791:intron | 15.0% |
| !! | GAATTAAATTAAATGCTAAT+AGG | + | chr5.4:69410670-69410689 | MS.gene39791:intron | 15.0% |
| !!! | AATAGTTCTAAAATGTTTAT+AGG | - | chr5.4:69413562-69413581 | None:intergenic | 15.0% |
| !!! | ACAAATCATTTTCATTAAAT+GGG | - | chr5.4:69416351-69416370 | None:intergenic | 15.0% |
| !!! | ATAATGAATAAATTTTCATC+AGG | + | chr5.4:69414005-69414024 | MS.gene39791:intron | 15.0% |
| !!! | TATTTAAGATTGAAATGTTT+TGG | - | chr5.4:69412770-69412789 | None:intergenic | 15.0% |
| !!! | TCTGAAAAGTATATTTTTTT+GGG | + | chr5.4:69413966-69413985 | MS.gene39791:intron | 15.0% |
| !!! | TTTTCAAGAAAAAAATTATG+TGG | - | chr5.4:69411514-69411533 | None:intergenic | 15.0% |
| !! | AAAAAAAAACCATCAATATG+TGG | + | chr5.4:69412707-69412726 | MS.gene39791:intron | 20.0% |
| !! | AAGAACATCAAATCATTAAA+TGG | - | chr5.4:69416377-69416396 | None:intergenic | 20.0% |
| !! | AATAAATATGCAGGTAATAT+CGG | + | chr5.4:69414665-69414684 | MS.gene39791:intron | 20.0% |
| !! | AATAATCTACAGTTTAAACT+TGG | - | chr5.4:69410872-69410891 | None:intergenic | 20.0% |
| !! | AATTAATGTGAATTTCGAAA+TGG | - | chr5.4:69411609-69411628 | None:intergenic | 20.0% |
| !! | AATTTAAATGTGTCATGATT+AGG | - | chr5.4:69412858-69412877 | None:intergenic | 20.0% |
| !! | ATTACGTGTGTTAAATTAAA+TGG | + | chr5.4:69410889-69410908 | MS.gene39791:intron | 20.0% |
| !! | ATTCACCTAAAATTTACAAA+AGG | - | chr5.4:69412547-69412566 | None:intergenic | 20.0% |
| !! | ATTTAAATGTGTCATGATTA+GGG | - | chr5.4:69412857-69412876 | None:intergenic | 20.0% |
| !! | CCAAAAATATATTTAATCCT+TGG | + | chr5.4:69414057-69414076 | MS.gene39791:intron | 20.0% |
| !! | GATTATTCTGTTTGTTTAAT+TGG | + | chr5.4:69410740-69410759 | MS.gene39791:intron | 20.0% |
| !! | GTCTTCATAAAATTTGAAAA+TGG | - | chr5.4:69414038-69414057 | None:intergenic | 20.0% |
| !! | TATAATAAGAAAATGCTATG+AGG | - | chr5.4:69412806-69412825 | None:intergenic | 20.0% |
| !! | TTACAATTATACACAACATA+TGG | - | chr5.4:69411768-69411787 | None:intergenic | 20.0% |
| !! | TTATAATATAAGATCGCAAA+AGG | - | chr5.4:69414490-69414509 | None:intergenic | 20.0% |
| !! | TTCAATCTTAAATAAAAGAG+TGG | + | chr5.4:69412776-69412795 | MS.gene39791:intron | 20.0% |
| !! | TTTAAATTTACAGAACTAGT+TGG | - | chr5.4:69413326-69413345 | None:intergenic | 20.0% |
| !! | TTTCAAAATGAATTAATGTG+TGG | + | chr5.4:69410998-69411017 | MS.gene39791:intron | 20.0% |
| !!! | AAAAATCTCTTCTTTTCAAT+AGG | + | chr5.4:69413066-69413085 | MS.gene39791:intron | 20.0% |
| !!! | AATTTTAATTATTTGCAGGA+AGG | + | chr5.4:69414992-69415011 | MS.gene39791:intron | 20.0% |
| !!! | ATTGAAAAGAAGAGATTTTT+GGG | - | chr5.4:69413066-69413085 | None:intergenic | 20.0% |
| !!! | ATTGTTTTTTATGTCATATG+TGG | + | chr5.4:69415616-69415635 | MS.gene39791:intron | 20.0% |
| !!! | CAAAACACGTTAAAATATTT+TGG | + | chr5.4:69415384-69415403 | MS.gene39791:intron | 20.0% |
| !!! | CAAAATATTTTAACGTGTTT+TGG | - | chr5.4:69415386-69415405 | None:intergenic | 20.0% |
| !!! | CAAATCATTTTCATTAAATG+GGG | - | chr5.4:69416350-69416369 | None:intergenic | 20.0% |
| !!! | CCAAGGATTAAATATATTTT+TGG | - | chr5.4:69414060-69414079 | None:intergenic | 20.0% |
| !!! | CTGAAAAGTATATTTTTTTG+GGG | + | chr5.4:69413967-69413986 | MS.gene39791:intron | 20.0% |
| !!! | GACAAATCATTTTCATTAAA+TGG | - | chr5.4:69416352-69416371 | None:intergenic | 20.0% |
| !!! | GGTTAATTTTAATTATTTGC+AGG | + | chr5.4:69414988-69415007 | MS.gene39791:intron | 20.0% |
| !!! | GTCTGAAAAGTATATTTTTT+TGG | + | chr5.4:69413965-69413984 | MS.gene39791:intron | 20.0% |
| !!! | TATTGAAAAGAAGAGATTTT+TGG | - | chr5.4:69413067-69413086 | None:intergenic | 20.0% |
| !!! | TTAATAATGCAATCTCATTT+TGG | + | chr5.4:69411206-69411225 | MS.gene39791:intron | 20.0% |
| !!! | TTATTTATTGATTGATCGAT+TGG | + | chr5.4:69410930-69410949 | MS.gene39791:intron | 20.0% |
| !!! | TTTTCTGAATTTTTGTTATG+CGG | + | chr5.4:69410525-69410544 | MS.gene39791:intron | 20.0% |
| !!! | TTTTGTAAATTTTAGGTGAA+TGG | + | chr5.4:69412546-69412565 | MS.gene39791:intron | 20.0% |
| !!! | TTTTTCTTCTTCTTTTCTTT+GGG | + | chr5.4:69415547-69415566 | MS.gene39791:intron | 20.0% |
| !!! | TTTTTTACCCTTTCATATAT+AGG | + | chr5.4:69412610-69412629 | MS.gene39791:intron | 20.0% |
| !!! | TTTTTTCTTCTTCTTTTCTT+TGG | + | chr5.4:69415546-69415565 | MS.gene39791:intron | 20.0% |
| ! | AAAACTTGCCTATATATGAA+AGG | - | chr5.4:69412621-69412640 | None:intergenic | 25.0% |
| ! | AAACTTGCCTATATATGAAA+GGG | - | chr5.4:69412620-69412639 | None:intergenic | 25.0% |
| ! | AAGAGTAGATAAAGAAAATG+AGG | + | chr5.4:69414196-69414215 | MS.gene39791:intron | 25.0% |
| ! | AATATAGACTGAGGAAATAT+TGG | + | chr5.4:69415651-69415670 | MS.gene39791:intron | 25.0% |
| ! | AATTTCATATACACAGATGA+TGG | + | chr5.4:69414117-69414136 | MS.gene39791:intron | 25.0% |
| ! | AGAGTAGATAAAGAAAATGA+GGG | + | chr5.4:69414197-69414216 | MS.gene39791:intron | 25.0% |
| ! | ATAGTGTTTCACCTATAAAA+TGG | - | chr5.4:69411937-69411956 | None:intergenic | 25.0% |
| ! | GAAATTCACATTAATTGTTC+TGG | + | chr5.4:69411613-69411632 | MS.gene39791:intron | 25.0% |
| ! | GAATAATGAGAACAAAACAT+TGG | + | chr5.4:69414151-69414170 | MS.gene39791:intron | 25.0% |
| ! | GATTAACAACTTCAAATTCA+TGG | - | chr5.4:69415849-69415868 | None:intergenic | 25.0% |
| ! | TATTCACTAGGTTTGAATAA+TGG | + | chr5.4:69413578-69413597 | MS.gene39791:intron | 25.0% |
| ! | TATTCCAACAACTTTGTATT+TGG | + | chr5.4:69412831-69412850 | MS.gene39791:intron | 25.0% |
| ! | TATTCTGTTTGTTTAATTGG+TGG | + | chr5.4:69410743-69410762 | MS.gene39791:intron | 25.0% |
| ! | TGTAATGAAATATACCTGAT+GGG | - | chr5.4:69415061-69415080 | None:intergenic | 25.0% |
| ! | TGTCTTCATAGAGAAAAATA+TGG | + | chr5.4:69416614-69416633 | MS.gene39791:CDS | 25.0% |
| ! | TGTTTAGGAAATAAATATGC+AGG | + | chr5.4:69414656-69414675 | MS.gene39791:intron | 25.0% |
| ! | TTGATTGTTTGATTATGATG+AGG | + | chr5.4:69416315-69416334 | MS.gene39791:intron | 25.0% |
| !! | AAAAACAAGTTGAAACTTCA+GGG | - | chr5.4:69414617-69414636 | None:intergenic | 25.0% |
| !! | AATGTGATTTGGATTGAATT+AGG | + | chr5.4:69410832-69410851 | MS.gene39791:intron | 25.0% |
| !! | ATAGGTTTGTTTAAATTGCT+GGG | + | chr5.4:69413834-69413853 | MS.gene39791:intron | 25.0% |
| !! | ATTTTATAGGTGAAACACTA+TGG | + | chr5.4:69411936-69411955 | MS.gene39791:intron | 25.0% |
| !! | GATTCTGTTATTGATTGATT+TGG | + | chr5.4:69410773-69410792 | MS.gene39791:intron | 25.0% |
| !! | TAAAAACAAGTTGAAACTTC+AGG | - | chr5.4:69414618-69414637 | None:intergenic | 25.0% |
| !! | TACTGCCTTTTGTAAATTTT+AGG | + | chr5.4:69412539-69412558 | MS.gene39791:intron | 25.0% |
| !! | TATTGCAGAAACCATTTTAT+AGG | + | chr5.4:69411923-69411942 | MS.gene39791:intron | 25.0% |
| !! | TGGTTTATTTACTTGAGTTT+TGG | + | chr5.4:69415691-69415710 | MS.gene39791:intron | 25.0% |
| !! | TGTTGTAATTTAAAGCTAAG+TGG | - | chr5.4:69413284-69413303 | None:intergenic | 25.0% |
| !! | TTATATTGATCCCATTGATT+TGG | + | chr5.4:69412282-69412301 | MS.gene39791:intron | 25.0% |
| !! | TTTGAAGTTGTTAATCAGTA+AGG | + | chr5.4:69415853-69415872 | MS.gene39791:intron | 25.0% |
| !! | TTTTCTTCTTCTTTTCTTTG+GGG | + | chr5.4:69415548-69415567 | MS.gene39791:intron | 25.0% |
| !!! | AAATGTAGACTTGATAGTTT+TGG | + | chr5.4:69414309-69414328 | MS.gene39791:intron | 25.0% |
| !!! | AATATTTTAACGTGTTTTGG+AGG | - | chr5.4:69415383-69415402 | None:intergenic | 25.0% |
| !!! | AATGTAGACTTGATAGTTTT+GGG | + | chr5.4:69414310-69414329 | MS.gene39791:intron | 25.0% |
| !!! | ACATTTTAGAACTATTCACT+AGG | + | chr5.4:69413566-69413585 | MS.gene39791:intron | 25.0% |
| !!! | ACTGTCTTTTCTTTTTGTTT+AGG | + | chr5.4:69414641-69414660 | MS.gene39791:intron | 25.0% |
| !!! | AGAGTCAACTTTTATTTACA+AGG | + | chr5.4:69414539-69414558 | MS.gene39791:intron | 25.0% |
| !!! | AGTTTCATCAGTATTTTAGA+AGG | - | chr5.4:69413385-69413404 | None:intergenic | 25.0% |
| !!! | CTTTTAAAATTTACTGGACA+TGG | - | chr5.4:69412465-69412484 | None:intergenic | 25.0% |
| !!! | GAGTCAACTTTTATTTACAA+GGG | + | chr5.4:69414540-69414559 | MS.gene39791:intron | 25.0% |
| !!! | GTTTCATCAGTATTTTAGAA+GGG | - | chr5.4:69413384-69413403 | None:intergenic | 25.0% |
| !!! | TATAGTTGATGAATGTGATT+TGG | + | chr5.4:69410821-69410840 | MS.gene39791:intron | 25.0% |
| !!! | TCATGAAATCTAACTTGTTT+TGG | - | chr5.4:69412967-69412986 | None:intergenic | 25.0% |
| !!! | TCTGGTCTTTTAAAATTTAC+TGG | - | chr5.4:69412471-69412490 | None:intergenic | 25.0% |
| !!! | TGTTTAACTTGAAAACAAAC+AGG | + | chr5.4:69411377-69411396 | MS.gene39791:intron | 25.0% |
| !!! | TGTTTGAAGATTTTGAAGAA+CGG | + | chr5.4:69411125-69411144 | MS.gene39791:intron | 25.0% |
| !!! | TGTTTGTTTTCAAGTTAAAC+AGG | - | chr5.4:69411378-69411397 | None:intergenic | 25.0% |
| !!! | TGTTTGTTTTCAAGTTCAAT+AGG | - | chr5.4:69411427-69411446 | None:intergenic | 25.0% |
| !!! | TTTCATCAGTATTTTAGAAG+GGG | - | chr5.4:69413383-69413402 | None:intergenic | 25.0% |
| !!! | TTTTTTTCTTGAAAAACACG+TGG | + | chr5.4:69411519-69411538 | MS.gene39791:intron | 25.0% |
| AAAAGGCAGTAAAATAGTGA+AGG | - | chr5.4:69412530-69412549 | None:intergenic | 30.0% | |
| AAATGAAATAACGAAGAACG+AGG | - | chr5.4:69410500-69410519 | None:intergenic | 30.0% | |
| AAATTGTGAAATGAGCTGTT+TGG | + | chr5.4:69411715-69411734 | MS.gene39791:intron | 30.0% | |
| AACTATCATGTTTCCAGATT+TGG | - | chr5.4:69412939-69412958 | None:intergenic | 30.0% | |
| AATTCCAAGTGATCATAACA+GGG | - | chr5.4:69414848-69414867 | None:intergenic | 30.0% | |
| ACAATTTACACACTTGATCA+AGG | - | chr5.4:69411702-69411721 | None:intergenic | 30.0% | |
| ACATTTGATTGAGAAAAGGA+GGG | - | chr5.4:69414776-69414795 | None:intergenic | 30.0% | |
| AGAAATAACACATGCAGTAT+TGG | + | chr5.4:69412035-69412054 | MS.gene39791:intron | 30.0% | |
| ATGAGCAATTTCCAAATCAA+TGG | - | chr5.4:69412296-69412315 | None:intergenic | 30.0% | |
| ATTTAATCCTTGGTTTCATC+TGG | + | chr5.4:69414067-69414086 | MS.gene39791:intron | 30.0% | |
| ATTTCATCACATTAATGCTC+TGG | - | chr5.4:69415752-69415771 | None:intergenic | 30.0% | |
| CAAACAATCAAAAGCAATCA+TGG | - | chr5.4:69416306-69416325 | None:intergenic | 30.0% | |
| CAGAATAGAAAGAAAGAAAG+TGG | - | chr5.4:69413640-69413659 | None:intergenic | 30.0% | |
| CATCAGGTATATTTCATTAC+AGG | + | chr5.4:69415060-69415079 | MS.gene39791:CDS | 30.0% | |
| CATTAATTGTTCTGGTCTAA+CGG | + | chr5.4:69411621-69411640 | MS.gene39791:intron | 30.0% | |
| CCGAAAAATAATTTCCTAGT+CGG | + | chr5.4:69412682-69412701 | MS.gene39791:intron | 30.0% | |
| CTGTAATGAAATATACCTGA+TGG | - | chr5.4:69415062-69415081 | None:intergenic | 30.0% | |
| CTTTATTCCTGGTCATTATT+TGG | + | chr5.4:69412322-69412341 | MS.gene39791:intron | 30.0% | |
| GAAAATTCCAAATAATGACC+AGG | - | chr5.4:69412332-69412351 | None:intergenic | 30.0% | |
| GATCAATATAAAGTGTACAC+AGG | - | chr5.4:69412273-69412292 | None:intergenic | 30.0% | |
| GATCTATCAGTTGCTAAAAT+AGG | - | chr5.4:69413533-69413552 | None:intergenic | 30.0% | |
| GCAACATTTGCTTAAATCAA+AGG | - | chr5.4:69414383-69414402 | None:intergenic | 30.0% | |
| GTACCAGATAATTGTATATG+TGG | + | chr5.4:69411576-69411595 | MS.gene39791:intron | 30.0% | |
| GTCAATTGAATTGAATCATG+AGG | - | chr5.4:69412890-69412909 | None:intergenic | 30.0% | |
| GTCCAAAACTTGATTAGATA+GGG | + | chr5.4:69411043-69411062 | MS.gene39791:intron | 30.0% | |
| GTGCACAATTTCATTTAACA+TGG | + | chr5.4:69412572-69412591 | MS.gene39791:intron | 30.0% | |
| GTTATGATCACTTGGAATTA+TGG | + | chr5.4:69414849-69414868 | MS.gene39791:CDS | 30.0% | |
| TAATGCAAGAATCACGAAAA+TGG | - | chr5.4:69411189-69411208 | None:intergenic | 30.0% | |
| TAATTCCAAGTGATCATAAC+AGG | - | chr5.4:69414849-69414868 | None:intergenic | 30.0% | |
| TCTTAGATTGTTAAGAGGAA+GGG | + | chr5.4:69414254-69414273 | MS.gene39791:intron | 30.0% | |
| TGACATGAAAAGTTAGCAAT+CGG | + | chr5.4:69414967-69414986 | MS.gene39791:intron | 30.0% | |
| TGACTATTTGATTCCAAATC+TGG | + | chr5.4:69412923-69412942 | MS.gene39791:intron | 30.0% | |
| TGAGCAATTTCCAAATCAAT+GGG | - | chr5.4:69412295-69412314 | None:intergenic | 30.0% | |
| TGCACAAAAAATCTTGTATG+CGG | + | chr5.4:69412138-69412157 | MS.gene39791:intron | 30.0% | |
| TGGTGAACAAAGATATATTC+CGG | + | chr5.4:69415094-69415113 | MS.gene39791:CDS | 30.0% | |
| TGTCCAAAACTTGATTAGAT+AGG | + | chr5.4:69411042-69411061 | MS.gene39791:intron | 30.0% | |
| TGTTCTCATTATTCTGTTCT+GGG | - | chr5.4:69414145-69414164 | None:intergenic | 30.0% | |
| TTACCAAACTTACTAACGTA+GGG | + | chr5.4:69411251-69411270 | MS.gene39791:intron | 30.0% | |
| TTACGAAATCCAAAATTGCT+AGG | - | chr5.4:69412095-69412114 | None:intergenic | 30.0% | |
| TTCGGATTATAAAATCCGAA+CGG | + | chr5.4:69415338-69415357 | MS.gene39791:intron | 30.0% | |
| TTGGAAAACAATTTCCACAA+TGG | - | chr5.4:69412751-69412770 | None:intergenic | 30.0% | |
| TTGTTCTCATTATTCTGTTC+TGG | - | chr5.4:69414146-69414165 | None:intergenic | 30.0% | |
| TTGTTCTGTAACAATAGTTG+AGG | + | chr5.4:69414445-69414464 | MS.gene39791:intron | 30.0% | |
| TTTAATCCTTGGTTTCATCT+GGG | + | chr5.4:69414068-69414087 | MS.gene39791:intron | 30.0% | |
| TTTACCAAACTTACTAACGT+AGG | + | chr5.4:69411250-69411269 | MS.gene39791:intron | 30.0% | |
| TTTATAATCCGAACTGCATA+GGG | - | chr5.4:69415331-69415350 | None:intergenic | 30.0% | |
| ! | AGGATTTCTTTGTACTTTTC+AGG | + | chr5.4:69414719-69414738 | MS.gene39791:intron | 30.0% |
| ! | AGGTAATTTTGTTCAAACTG+TGG | + | chr5.4:69410690-69410709 | MS.gene39791:intron | 30.0% |
| ! | ATGATGATATGCTTGTTGAT+AGG | + | chr5.4:69413816-69413835 | MS.gene39791:intron | 30.0% |
| ! | CCAAACAAAACATTTTCTCT+CGG | - | chr5.4:69412381-69412400 | None:intergenic | 30.0% |
| ! | GATAGGTTTGTTTAAATTGC+TGG | + | chr5.4:69413833-69413852 | MS.gene39791:intron | 30.0% |
| ! | GATTTCTTGTTTATGGTCAA+CGG | - | chr5.4:69411340-69411359 | None:intergenic | 30.0% |
| ! | GGTTATATTTTCATGAGTGT+GGG | + | chr5.4:69413489-69413508 | MS.gene39791:intron | 30.0% |
| ! | GTTGAGGCTGAAATTAATTT+TGG | + | chr5.4:69414461-69414480 | MS.gene39791:intron | 30.0% |
| ! | TGAGCAATCATGTCATTTAA+TGG | - | chr5.4:69413732-69413751 | None:intergenic | 30.0% |
| ! | TGGTTATATTTTCATGAGTG+TGG | + | chr5.4:69413488-69413507 | MS.gene39791:intron | 30.0% |
| ! | TTCCCTATCTAATCAAGTTT+TGG | - | chr5.4:69411048-69411067 | None:intergenic | 30.0% |
| ! | TTTTATAATCCGAACTGCAT+AGG | - | chr5.4:69415332-69415351 | None:intergenic | 30.0% |
| ! | TTTTGGACATACAAATCACA+TGG | - | chr5.4:69411031-69411050 | None:intergenic | 30.0% |
| !! | AAGTTGATAAAATACGAGTC+TGG | - | chr5.4:69412489-69412508 | None:intergenic | 30.0% |
| !! | AGTCATTTTCCACATATTGA+TGG | - | chr5.4:69412719-69412738 | None:intergenic | 30.0% |
| !! | CCGACTAGGAAATTATTTTT+CGG | - | chr5.4:69412685-69412704 | None:intergenic | 30.0% |
| !! | TTTTGTCCATTTTGGAAATC+AGG | + | chr5.4:69411658-69411677 | MS.gene39791:intron | 30.0% |
| !!! | AGATAGATCTCAGGTTTTTT+TGG | + | chr5.4:69414419-69414438 | MS.gene39791:intron | 30.0% |
| !!! | GAAATCTAACTTGTTTTGGA+GGG | - | chr5.4:69412963-69412982 | None:intergenic | 30.0% |
| !!! | GTGTTTTGGAGGATTTTATA+GGG | - | chr5.4:69415372-69415391 | None:intergenic | 30.0% |
| !!! | TCTGTTGATTTTGTCCATTT+TGG | + | chr5.4:69411650-69411669 | MS.gene39791:intron | 30.0% |
| !!! | TGAAATCTAACTTGTTTTGG+AGG | - | chr5.4:69412964-69412983 | None:intergenic | 30.0% |
| !!! | TGGTTTTTTTTTTACCGACT+AGG | - | chr5.4:69412699-69412718 | None:intergenic | 30.0% |
| !!! | TTGATGTTCTTGTTTTTTGC+AGG | + | chr5.4:69416386-69416405 | MS.gene39791:intron | 30.0% |
| !!! | TTGGAGGGTTTAGTTTTATT+GGG | + | chr5.4:69415971-69415990 | MS.gene39791:intron | 30.0% |
| !!! | TTTGGAGGGTTTAGTTTTAT+TGG | + | chr5.4:69415970-69415989 | MS.gene39791:intron | 30.0% |
| AAAAGCAGTCGTTACTGATA+AGG | + | chr5.4:69411308-69411327 | MS.gene39791:intron | 35.0% | |
| AAATATGCAGGTAATATCGG+TGG | + | chr5.4:69414668-69414687 | MS.gene39791:intron | 35.0% | |
| AAGGAGCAAATGGAAAGAAT+AGG | + | chr5.4:69415927-69415946 | MS.gene39791:intron | 35.0% | |
| AAGTCTAAACTTCAAGGACA+CGG | - | chr5.4:69414517-69414536 | None:intergenic | 35.0% | |
| AATGAAATATACCTGATGGG+AGG | - | chr5.4:69415058-69415077 | None:intergenic | 35.0% | |
| AATTCCATCTGAGTTTGAGT+TGG | + | chr5.4:69411487-69411506 | MS.gene39791:intron | 35.0% | |
| ACAAGAAATCGTTGACCATT+TGG | + | chr5.4:69411350-69411369 | MS.gene39791:intron | 35.0% | |
| ACGCCACATATACAATTATC+TGG | - | chr5.4:69411582-69411601 | None:intergenic | 35.0% | |
| ACTGTTTGCAGTTCAATGTT+TGG | + | chr5.4:69411836-69411855 | MS.gene39791:intron | 35.0% | |
| ACTTGATTAGATAGGGAATG+AGG | + | chr5.4:69411050-69411069 | MS.gene39791:intron | 35.0% | |
| AGAGTAGTTAGGAAATAAGC+AGG | + | chr5.4:69414229-69414248 | MS.gene39791:intron | 35.0% | |
| AGGACTCTTAGATTGTTAAG+AGG | + | chr5.4:69414249-69414268 | MS.gene39791:intron | 35.0% | |
| AGGAGCAAATGGAAAGAATA+GGG | + | chr5.4:69415928-69415947 | MS.gene39791:intron | 35.0% | |
| ATATAAAGTGTACACAGGTC+AGG | - | chr5.4:69412268-69412287 | None:intergenic | 35.0% | |
| ATCCAGAAGCTTGAATTGAA+TGG | - | chr5.4:69411814-69411833 | None:intergenic | 35.0% | |
| ATGATCACTTGGAATTATGG+AGG | + | chr5.4:69414852-69414871 | MS.gene39791:CDS | 35.0% | |
| CAAGCTACCATTACTAACAA+AGG | - | chr5.4:69414939-69414958 | None:intergenic | 35.0% | |
| CACATTTGATTGAGAAAAGG+AGG | - | chr5.4:69414777-69414796 | None:intergenic | 35.0% | |
| CATCATGAATCATGATGCAT+CGG | - | chr5.4:69412118-69412137 | None:intergenic | 35.0% | |
| CATGAGTGTGGGAAAAAATT+AGG | + | chr5.4:69413500-69413519 | MS.gene39791:intron | 35.0% | |
| CGGATCTTGCATAGTTAAAA+TGG | - | chr5.4:69413001-69413020 | None:intergenic | 35.0% | |
| CTCATTGTCATCTTTATTCC+TGG | + | chr5.4:69412311-69412330 | MS.gene39791:intron | 35.0% | |
| CTCTACAAGTCTAAACTTCA+AGG | - | chr5.4:69414523-69414542 | None:intergenic | 35.0% | |
| CTCTTAGATTGTTAAGAGGA+AGG | + | chr5.4:69414253-69414272 | MS.gene39791:intron | 35.0% | |
| CTTGACCATAACTAGATTCT+GGG | - | chr5.4:69416464-69416483 | None:intergenic | 35.0% | |
| CTTGATTAGATAGGGAATGA+GGG | + | chr5.4:69411051-69411070 | MS.gene39791:intron | 35.0% | |
| GATGACTCCTTTGTTAGTAA+TGG | + | chr5.4:69414929-69414948 | MS.gene39791:intron | 35.0% | |
| GCAATTCCTGATTTCCAAAA+TGG | - | chr5.4:69411667-69411686 | None:intergenic | 35.0% | |
| GCAGAAAATCTCGTGAAATT+TGG | - | chr5.4:69415721-69415740 | None:intergenic | 35.0% | |
| GCTTGATTAACAATACCATG+AGG | - | chr5.4:69414810-69414829 | None:intergenic | 35.0% | |
| TACTTGCAAAAATCACTCTC+AGG | - | chr5.4:69413893-69413912 | None:intergenic | 35.0% | |
| TATGTCATATGTGGAGATCA+AGG | + | chr5.4:69415625-69415644 | MS.gene39791:intron | 35.0% | |
| TCAAAATCTGTTGTTGCCAT+GGG | + | chr5.4:69416639-69416658 | MS.gene39791:CDS | 35.0% | |
| TCAAGGATGAATATAGACTG+AGG | + | chr5.4:69415642-69415661 | MS.gene39791:intron | 35.0% | |
| TCTACATCTCTGTTCAAAGA+CGG | - | chr5.4:69413690-69413709 | None:intergenic | 35.0% | |
| TGACTGTTTATCTTCCATTG+TGG | + | chr5.4:69412734-69412753 | MS.gene39791:intron | 35.0% | |
| TGATTTAGCACAACATGTTG+AGG | - | chr5.4:69416594-69416613 | None:intergenic | 35.0% | |
| TGCCACATTTGATTGAGAAA+AGG | - | chr5.4:69414780-69414799 | None:intergenic | 35.0% | |
| TGTAGTCTAATGAAGCTTCA+TGG | + | chr5.4:69413468-69413487 | MS.gene39791:intron | 35.0% | |
| TTAACAAGAACACCTAGCTA+TGG | - | chr5.4:69413444-69413463 | None:intergenic | 35.0% | |
| TTGAACAGAGATGTAGAAGA+GGG | + | chr5.4:69413693-69413712 | MS.gene39791:intron | 35.0% | |
| TTGACCATAACTAGATTCTG+GGG | - | chr5.4:69416463-69416482 | None:intergenic | 35.0% | |
| TTGATTAGATAGGGAATGAG+GGG | + | chr5.4:69411052-69411071 | MS.gene39791:intron | 35.0% | |
| TTTCTGTAGCTAAGTTTCCT+GGG | + | chr5.4:69413188-69413207 | MS.gene39791:intron | 35.0% | |
| TTTGAACAGAGATGTAGAAG+AGG | + | chr5.4:69413692-69413711 | MS.gene39791:intron | 35.0% | |
| ! | ATGGAAAGAATAGGGACTTT+TGG | + | chr5.4:69415936-69415955 | MS.gene39791:intron | 35.0% |
| ! | CTCCTTTTCTCAATCAAATG+TGG | + | chr5.4:69414775-69414794 | MS.gene39791:CDS | 35.0% |
| ! | CTTTTAAATGTATGCACGCT+TGG | - | chr5.4:69411293-69411312 | None:intergenic | 35.0% |
| ! | GGTCAACGATTTCTTGTTTA+TGG | - | chr5.4:69411347-69411366 | None:intergenic | 35.0% |
| ! | TGGAAAGAATAGGGACTTTT+GGG | + | chr5.4:69415937-69415956 | MS.gene39791:intron | 35.0% |
| ! | TGGAGTTTAGAATCCGAATA+GGG | + | chr5.4:69415404-69415423 | MS.gene39791:intron | 35.0% |
| ! | TTGGAGTTTAGAATCCGAAT+AGG | + | chr5.4:69415403-69415422 | MS.gene39791:intron | 35.0% |
| !! | AGAAGGTGTCATGCAAAATT+AGG | - | chr5.4:69415280-69415299 | None:intergenic | 35.0% |
| !! | CCGAGAGAAAATGTTTTGTT+TGG | + | chr5.4:69412378-69412397 | MS.gene39791:intron | 35.0% |
| !! | GAAAAGAAGAGATTTTTGGG+TGG | - | chr5.4:69413063-69413082 | None:intergenic | 35.0% |
| !! | TCTTCTCCTAAGCTTTGTTT+GGG | - | chr5.4:69416219-69416238 | None:intergenic | 35.0% |
| !! | TTCTTCTCCTAAGCTTTGTT+TGG | - | chr5.4:69416220-69416239 | None:intergenic | 35.0% |
| !!! | AGTTTTGGGAAACTGAGAAA+GGG | + | chr5.4:69414324-69414343 | MS.gene39791:intron | 35.0% |
| !!! | CGTGTTTTGGAGGATTTTAT+AGG | - | chr5.4:69415373-69415392 | None:intergenic | 35.0% |
| !!! | TAGTTTTGGGAAACTGAGAA+AGG | + | chr5.4:69414323-69414342 | MS.gene39791:intron | 35.0% |
| !!! | TGCTTTTTCTTCCGATTCAA+TGG | + | chr5.4:69410398-69410417 | MS.gene39791:CDS | 35.0% |
| !!! | TGGAGGGTTTAGTTTTATTG+GGG | + | chr5.4:69415972-69415991 | MS.gene39791:intron | 35.0% |
| AAGGGCTTAAATTGTAGGAG+GGG | + | chr5.4:69414272-69414291 | MS.gene39791:intron | 40.0% | |
| AATAGGCACCAAATGGTCAA+CGG | - | chr5.4:69411410-69411429 | None:intergenic | 40.0% | |
| ACACCCTACGTTAGTAAGTT+TGG | - | chr5.4:69411257-69411276 | None:intergenic | 40.0% | |
| ACCTCTTGAGAGGTTTGTAA+AGG | - | chr5.4:69416704-69416723 | None:intergenic | 40.0% | |
| ACTAAGATCTGCCGATGTTT+CGG | - | chr5.4:69413021-69413040 | None:intergenic | 40.0% | |
| AGACTTTGCAAAAGAGCCAA+TGG | + | chr5.4:69416500-69416519 | MS.gene39791:CDS | 40.0% | |
| AGAGGAAGGGCTTAAATTGT+AGG | + | chr5.4:69414267-69414286 | MS.gene39791:intron | 40.0% | |
| AGGGCCAAATACAAAGTTGT+TGG | - | chr5.4:69412838-69412857 | None:intergenic | 40.0% | |
| ATTCTTATAGTCCTCCCATC+AGG | + | chr5.4:69415044-69415063 | MS.gene39791:CDS | 40.0% | |
| CAAAATTGCTAGGCCAACAT+TGG | - | chr5.4:69412085-69412104 | None:intergenic | 40.0% | |
| CAAACTCAGACACACTTTCA+GGG | - | chr5.4:69416428-69416447 | None:intergenic | 40.0% | |
| CAAACTCCCAAACAAAGCTT+AGG | + | chr5.4:69416210-69416229 | MS.gene39791:intron | 40.0% | |
| CAAACTGACCCCAATCATTT+GGG | - | chr5.4:69413419-69413438 | None:intergenic | 40.0% | |
| CAACTGTCACATATTTCGAC+TGG | - | chr5.4:69416680-69416699 | None:intergenic | 40.0% | |
| CAAGTTAAACAGGCTCCAAA+TGG | - | chr5.4:69411368-69411387 | None:intergenic | 40.0% | |
| CAAGTTCAATAGGCACCAAA+TGG | - | chr5.4:69411417-69411436 | None:intergenic | 40.0% | |
| CATTACAGGTTCATTGTCGA+TGG | + | chr5.4:69415074-69415093 | MS.gene39791:CDS | 40.0% | |
| CCTTATGTAGCTGATGAGAT+GGG | + | chr5.4:69415122-69415141 | MS.gene39791:CDS | 40.0% | |
| CTACATCTCTGTTCAAAGAC+GGG | - | chr5.4:69413689-69413708 | None:intergenic | 40.0% | |
| CTACTGATCCCAAATGATTG+GGG | + | chr5.4:69413408-69413427 | MS.gene39791:intron | 40.0% | |
| CTATGCAAGATCCGAAACAT+CGG | + | chr5.4:69413007-69413026 | MS.gene39791:intron | 40.0% | |
| CTCAAAATCTGTTGTTGCCA+TGG | + | chr5.4:69416638-69416657 | MS.gene39791:CDS | 40.0% | |
| CTCTCTCTTAGATAGATCTC+AGG | + | chr5.4:69414410-69414429 | MS.gene39791:intron | 40.0% | |
| CTTATGTAGCTGATGAGATG+GGG | + | chr5.4:69415123-69415142 | MS.gene39791:CDS | 40.0% | |
| GAAGGGCTTAAATTGTAGGA+GGG | + | chr5.4:69414271-69414290 | MS.gene39791:intron | 40.0% | |
| GAATCCCTGTTATGATCACT+TGG | + | chr5.4:69414841-69414860 | MS.gene39791:CDS | 40.0% | |
| GAATTATGGAGGTAACAGTG+TGG | + | chr5.4:69414863-69414882 | MS.gene39791:CDS | 40.0% | |
| GACGCTTAGTCAGAACTTTA+CGG | + | chr5.4:69411447-69411466 | MS.gene39791:intron | 40.0% | |
| GCAAAAATCACTCTCAGGAA+AGG | - | chr5.4:69413888-69413907 | None:intergenic | 40.0% | |
| GCAATCATCGTTACACCAAA+AGG | - | chr5.4:69415501-69415520 | None:intergenic | 40.0% | |
| GCAGTTCAATGTTTGGACTT+CGG | + | chr5.4:69411843-69411862 | MS.gene39791:intron | 40.0% | |
| GCTACTGATCCCAAATGATT+GGG | + | chr5.4:69413407-69413426 | MS.gene39791:intron | 40.0% | |
| GCTCCATTACAAAGAGGTAA+CGG | + | chr5.4:69414750-69414769 | MS.gene39791:CDS | 40.0% | |
| GCTTGACCATAACTAGATTC+TGG | - | chr5.4:69416465-69416484 | None:intergenic | 40.0% | |
| GGAAAAAAGGAAGGAGCAAA+TGG | + | chr5.4:69415917-69415936 | MS.gene39791:intron | 40.0% | |
| GTTTCTGTAGCTAAGTTTCC+TGG | + | chr5.4:69413187-69413206 | MS.gene39791:intron | 40.0% | |
| TAACTTCCCAGATGAAACCA+AGG | - | chr5.4:69414077-69414096 | None:intergenic | 40.0% | |
| TATGCATTAGCAGCAGAACA+AGG | - | chr5.4:69412644-69412663 | None:intergenic | 40.0% | |
| TCAAACTCAGACACACTTTC+AGG | - | chr5.4:69416429-69416448 | None:intergenic | 40.0% | |
| TCAGCTACATAAGGAAGATC+CGG | - | chr5.4:69415116-69415135 | None:intergenic | 40.0% | |
| TCCTTATGTAGCTGATGAGA+TGG | + | chr5.4:69415121-69415140 | MS.gene39791:CDS | 40.0% | |
| TCCTTTACAAACCTCTCAAG+AGG | + | chr5.4:69416700-69416719 | MS.gene39791:CDS | 40.0% | |
| TGCCATTCAATTCAAGCTTC+TGG | + | chr5.4:69411809-69411828 | MS.gene39791:intron | 40.0% | |
| TGCTACTGATCCCAAATGAT+TGG | + | chr5.4:69413406-69413425 | MS.gene39791:intron | 40.0% | |
| TTCTCAATTCAGAGACTTCG+AGG | - | chr5.4:69412019-69412038 | None:intergenic | 40.0% | |
| TTTATTGGGGGAACTCGTAT+TGG | + | chr5.4:69415985-69416004 | MS.gene39791:intron | 40.0% | |
| TTTCCTGTCCTATATAGTCC+AGG | + | chr5.4:69416273-69416292 | MS.gene39791:intron | 40.0% | |
| TTTGGAGGGTGGGAAATATA+AGG | - | chr5.4:69416174-69416193 | None:intergenic | 40.0% | |
| ! | AAAGAATAGGGACTTTTGGG+AGG | + | chr5.4:69415940-69415959 | MS.gene39791:intron | 40.0% |
| ! | AGAAGAGTGCAAATGCAGAA+TGG | - | chr5.4:69415466-69415485 | None:intergenic | 40.0% |
| ! | CACGAGATTTTCTGCTTTCA+TGG | + | chr5.4:69415726-69415745 | MS.gene39791:intron | 40.0% |
| ! | CATGGCAACAACAGATTTTG+AGG | - | chr5.4:69416640-69416659 | None:intergenic | 40.0% |
| ! | CTTTGTTTGCGAGTTTGGAT+GGG | + | chr5.4:69415876-69415895 | MS.gene39791:intron | 40.0% |
| ! | GAAGAAAAAGCACGAATAGG+AGG | - | chr5.4:69410390-69410409 | None:intergenic | 40.0% |
| ! | GAAGAGTGCAAATGCAGAAT+GGG | - | chr5.4:69415465-69415484 | None:intergenic | 40.0% |
| ! | GGAGTTTAGAATCCGAATAG+GGG | + | chr5.4:69415405-69415424 | MS.gene39791:intron | 40.0% |
| ! | TATAGGGTGTTTATGCCGTT+CGG | - | chr5.4:69415356-69415375 | None:intergenic | 40.0% |
| ! | TCGGAAGAAAAAGCACGAAT+AGG | - | chr5.4:69410393-69410412 | None:intergenic | 40.0% |
| ! | TCTAGAGGATCTTGTCCTTT+TGG | + | chr5.4:69415483-69415502 | MS.gene39791:intron | 40.0% |
| ! | TGAAAGTGTGTCTGAGTTTG+AGG | + | chr5.4:69416428-69416447 | MS.gene39791:CDS | 40.0% |
| !! | AACATGTTGAGGCTTTGAAG+AGG | - | chr5.4:69416583-69416602 | None:intergenic | 40.0% |
| !! | AAGAATAGGGACTTTTGGGA+GGG | + | chr5.4:69415941-69415960 | MS.gene39791:intron | 40.0% |
| !! | ACATGTTGAGGCTTTGAAGA+GGG | - | chr5.4:69416582-69416601 | None:intergenic | 40.0% |
| !! | CAATGTTGGCCTAGCAATTT+TGG | + | chr5.4:69412083-69412102 | MS.gene39791:intron | 40.0% |
| !! | CTAAGCTTTGTTTGGGAGTT+TGG | - | chr5.4:69416212-69416231 | None:intergenic | 40.0% |
| !! | TAAGGCTTTGTTTGCGAGTT+TGG | + | chr5.4:69415871-69415890 | MS.gene39791:intron | 40.0% |
| !! | TTTTGGGAAACTGAGAAAGG+GGG | + | chr5.4:69414326-69414345 | MS.gene39791:intron | 40.0% |
| !!! | GGAGGGTTTAGTTTTATTGG+GGG | + | chr5.4:69415973-69415992 | MS.gene39791:intron | 40.0% |
| !!! | GGCAGATCTTAGTTTTGATG+AGG | + | chr5.4:69413028-69413047 | MS.gene39791:intron | 40.0% |
| !!! | GTTTTGGGAAACTGAGAAAG+GGG | + | chr5.4:69414325-69414344 | MS.gene39791:intron | 40.0% |
| !!! | TAGTTTTGATGAGGATGCCA+TGG | + | chr5.4:69413037-69413056 | MS.gene39791:intron | 40.0% |
| !!! | TCTTCTTTTCTTTGGGGTGA+CGG | + | chr5.4:69415554-69415573 | MS.gene39791:intron | 40.0% |
| AACGCTAACGGAAGAGAAGA+CGG | + | chr5.4:69410315-69410334 | MS.gene39791:CDS | 45.0% | |
| AAGTTTCCTGGGTTCGAATC+TGG | + | chr5.4:69413199-69413218 | MS.gene39791:intron | 45.0% | |
| AATAAGCGAATTCTCCTCCC+AGG | - | chr5.4:69414357-69414376 | None:intergenic | 45.0% | |
| AATTATGTATGCCAGCGCTG+TGG | + | chr5.4:69413155-69413174 | MS.gene39791:intron | 45.0% | |
| ACTGAACTGTCTGCCAATGT+TGG | + | chr5.4:69412069-69412088 | MS.gene39791:intron | 45.0% | |
| AGAAAGAGAAAGCGAACCTG+AGG | - | chr5.4:69410477-69410496 | None:intergenic | 45.0% | |
| AGGAGAGGACTTCGGAAAAA+AGG | + | chr5.4:69415904-69415923 | MS.gene39791:intron | 45.0% | |
| AGGGCTTAAATTGTAGGAGG+GGG | + | chr5.4:69414273-69414292 | MS.gene39791:intron | 45.0% | |
| ATAACAGGGATTCCTTGCTC+AGG | - | chr5.4:69414834-69414853 | None:intergenic | 45.0% | |
| CCCATCTCATCAGCTACATA+AGG | - | chr5.4:69415125-69415144 | None:intergenic | 45.0% | |
| CGGACTATTGGCCATTGAAT+CGG | - | chr5.4:69410412-69410431 | None:intergenic | 45.0% | |
| CTCAATAGGGTGGGAAAAGA+AGG | - | chr5.4:69415297-69415316 | None:intergenic | 45.0% | |
| CTGCATTTGCACTCTTCTAG+AGG | + | chr5.4:69415468-69415487 | MS.gene39791:intron | 45.0% | |
| GACAGTAAGCTAGTAGCCAA+GGG | - | chr5.4:69411997-69412016 | None:intergenic | 45.0% | |
| GAGGACTTCGGAAAAAAGGA+AGG | + | chr5.4:69415908-69415927 | MS.gene39791:intron | 45.0% | |
| GCAAACTGACCCCAATCATT+TGG | - | chr5.4:69413420-69413439 | None:intergenic | 45.0% | |
| GCTTGCTTGTATGCAATGTG+TGG | + | chr5.4:69415519-69415538 | MS.gene39791:intron | 45.0% | |
| GGAAAGCAGCTAGAGTAGTT+AGG | + | chr5.4:69414218-69414237 | MS.gene39791:intron | 45.0% | |
| GGAAGGGCTTAAATTGTAGG+AGG | + | chr5.4:69414270-69414289 | MS.gene39791:intron | 45.0% | |
| GGGTGTGTGAGAAACTCATA+GGG | + | chr5.4:69415425-69415444 | MS.gene39791:intron | 45.0% | |
| GTAACTAGATGTGAGGGGTA+AGG | + | chr5.4:69415584-69415603 | MS.gene39791:intron | 45.0% | |
| GTGCAGGTAACTAGATGTGA+GGG | + | chr5.4:69415578-69415597 | MS.gene39791:intron | 45.0% | |
| GTGTGAGAAACTCATAGGGT+GGG | + | chr5.4:69415429-69415448 | MS.gene39791:intron | 45.0% | |
| GTTAATCAAGCTCCTGAGCA+AGG | + | chr5.4:69414819-69414838 | MS.gene39791:CDS | 45.0% | |
| GTTTCTCACACACCCCTATT+CGG | - | chr5.4:69415420-69415439 | None:intergenic | 45.0% | |
| TGCAGGTAACTAGATGTGAG+GGG | + | chr5.4:69415579-69415598 | MS.gene39791:intron | 45.0% | |
| TGGATTCTGCACTCTACTGT+TGG | + | chr5.4:69415671-69415690 | MS.gene39791:intron | 45.0% | |
| TGGCTAAAATGTTGAACGCG+AGG | + | chr5.4:69413246-69413265 | MS.gene39791:intron | 45.0% | |
| TGGTCCAACTCAAACTCAGA+TGG | - | chr5.4:69411494-69411513 | None:intergenic | 45.0% | |
| TGTGTGAGAAACTCATAGGG+TGG | + | chr5.4:69415428-69415447 | MS.gene39791:intron | 45.0% | |
| TTTGCAAAGTCTTCCTCAGC+TGG | - | chr5.4:69416492-69416511 | None:intergenic | 45.0% | |
| TTTGCGAGTTTGGATGGGAA+GGG | + | chr5.4:69415881-69415900 | MS.gene39791:intron | 45.0% | |
| TTTGGGAAACTGAGAAAGGG+GGG | + | chr5.4:69414327-69414346 | MS.gene39791:intron | 45.0% | |
| ! | ACCATAACTAGATTCTGGGG+AGG | - | chr5.4:69416460-69416479 | None:intergenic | 45.0% |
| ! | CCATAACTAGATTCTGGGGA+GGG | - | chr5.4:69416459-69416478 | None:intergenic | 45.0% |
| ! | CCTCTAGCTCCATTACAAAG+AGG | + | chr5.4:69414744-69414763 | MS.gene39791:CDS | 45.0% |
| ! | CCTCTTTGTAATGGAGCTAG+AGG | - | chr5.4:69414747-69414766 | None:intergenic | 45.0% |
| ! | CGTAGGGTGTTTGTTTATGC+TGG | + | chr5.4:69411267-69411286 | MS.gene39791:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr5.4:69416207-69416226 | None:intergenic | 45.0% |
| ! | GAAAAAGCACGAATAGGAGG+TGG | - | chr5.4:69410387-69410406 | None:intergenic | 45.0% |
| ! | GACACACTTTCAGGGTTTTC+TGG | - | chr5.4:69416420-69416439 | None:intergenic | 45.0% |
| ! | GGAACTCGTATTGGAGGTTT+TGG | + | chr5.4:69415994-69416013 | MS.gene39791:intron | 45.0% |
| ! | TTTGTTGTGACGTGTTCCCT+TGG | + | chr5.4:69411978-69411997 | MS.gene39791:intron | 45.0% |
| !! | ACTCGTATTGGAGGTTTTGG+AGG | + | chr5.4:69415997-69416016 | MS.gene39791:intron | 45.0% |
| !! | AGAATAGGGACTTTTGGGAG+GGG | + | chr5.4:69415942-69415961 | MS.gene39791:intron | 45.0% |
| !! | AGCTTTGTTTGGGAGTTTGG+AGG | - | chr5.4:69416209-69416228 | None:intergenic | 45.0% |
| !! | CAGCGCTGGCATACATAATT+TGG | - | chr5.4:69413155-69413174 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+TGG | + | chr5.4:69415875-69415894 | MS.gene39791:intron | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr5.4:69416208-69416227 | None:intergenic | 45.0% |
| !!! | AAGAGATTTTTGGGTGGCCA+TGG | - | chr5.4:69413057-69413076 | None:intergenic | 45.0% |
| !!! | CTCGTATTGGAGGTTTTGGA+GGG | + | chr5.4:69415998-69416017 | MS.gene39791:intron | 45.0% |
| !!! | CTTCTTTTCTTTGGGGTGAC+GGG | + | chr5.4:69415555-69415574 | MS.gene39791:intron | 45.0% |
| !!! | TTCTTTTCTTTGGGGTGACG+GGG | + | chr5.4:69415556-69415575 | MS.gene39791:intron | 45.0% |
| !!! | TTGGAGGTTTTGGAGGGTTT+TGG | + | chr5.4:69416004-69416023 | MS.gene39791:intron | 45.0% |
| ACATGAGATTCCCAGGAGAG+TGG | - | chr5.4:69412427-69412446 | None:intergenic | 50.0% | |
| ACTGTAAGATGCAGCTGCGA+AGG | - | chr5.4:69416531-69416550 | None:intergenic | 50.0% | |
| ATGAGATTCCCAGGAGAGTG+GGG | - | chr5.4:69412425-69412444 | None:intergenic | 50.0% | |
| ATGTGGCAGAATGAGCCTCA+TGG | + | chr5.4:69414792-69414811 | MS.gene39791:CDS | 50.0% | |
| ATTGGGGGAACTCGTATTGG+AGG | + | chr5.4:69415988-69416007 | MS.gene39791:intron | 50.0% | |
| CACCTCTACATGAGATTCCC+AGG | - | chr5.4:69412434-69412453 | None:intergenic | 50.0% | |
| CAGCTGCATCTTACAGTCCT+AGG | + | chr5.4:69416534-69416553 | MS.gene39791:CDS | 50.0% | |
| CATGAGATTCCCAGGAGAGT+GGG | - | chr5.4:69412426-69412445 | None:intergenic | 50.0% | |
| CCATCCACAACGTGAAGACA+TGG | - | chr5.4:69411547-69411566 | None:intergenic | 50.0% | |
| CCATGTCTTCACGTTGTGGA+TGG | + | chr5.4:69411544-69411563 | MS.gene39791:intron | 50.0% | |
| CCCTCCCCAGAATCTAGTTA+TGG | + | chr5.4:69416456-69416475 | MS.gene39791:CDS | 50.0% | |
| CGCGAGAAACTCAATAGGGT+GGG | - | chr5.4:69415306-69415325 | None:intergenic | 50.0% | |
| CTAGAACGACGAGGACTTTG+AGG | - | chr5.4:69410435-69410454 | None:intergenic | 50.0% | |
| CTCCTGGGAATCTCATGTAG+AGG | + | chr5.4:69412429-69412448 | MS.gene39791:intron | 50.0% | |
| GACACTCGCCTGGACTATAT+AGG | - | chr5.4:69416284-69416303 | None:intergenic | 50.0% | |
| GCAAGAAGCCGTTGACCATT+TGG | + | chr5.4:69411399-69411418 | MS.gene39791:intron | 50.0% | |
| GCATCTTACAGTCCTAGGCA+TGG | + | chr5.4:69416539-69416558 | MS.gene39791:CDS | 50.0% | |
| GGACAGTAAGCTAGTAGCCA+AGG | - | chr5.4:69411998-69412017 | None:intergenic | 50.0% | |
| GGGCCGTTACCTCTTTGTAA+TGG | - | chr5.4:69414756-69414775 | None:intergenic | 50.0% | |
| GGGCTTAAATTGTAGGAGGG+GGG | + | chr5.4:69414274-69414293 | MS.gene39791:intron | 50.0% | |
| GGGGTGTGTGAGAAACTCAT+AGG | + | chr5.4:69415424-69415443 | MS.gene39791:intron | 50.0% | |
| GGTCAGTTTGCACCATAGCT+AGG | + | chr5.4:69413429-69413448 | MS.gene39791:intron | 50.0% | |
| GGTGCAGGTAACTAGATGTG+AGG | + | chr5.4:69415577-69415596 | MS.gene39791:intron | 50.0% | |
| GTTTGCGAGTTTGGATGGGA+AGG | + | chr5.4:69415880-69415899 | MS.gene39791:intron | 50.0% | |
| TCGCCTGGACTATATAGGAC+AGG | - | chr5.4:69416279-69416298 | None:intergenic | 50.0% | |
| TCTAGATCGCCGATCCTCTT+CGG | + | chr5.4:69410450-69410469 | MS.gene39791:CDS | 50.0% | |
| TGAGAAAGGGGGGAATTCCT+GGG | + | chr5.4:69414337-69414356 | MS.gene39791:intron | 50.0% | |
| TGGTCAAGCATATCCAGCTG+AGG | + | chr5.4:69416476-69416495 | MS.gene39791:CDS | 50.0% | |
| TTTCTGCCAGATTCGAACCC+AGG | - | chr5.4:69413208-69413227 | None:intergenic | 50.0% | |
| ! | TAACTAGATTCTGGGGAGGG+TGG | - | chr5.4:69416456-69416475 | None:intergenic | 50.0% |
| !! | AGGACTTTGAGGCGGACTAT+TGG | - | chr5.4:69410424-69410443 | None:intergenic | 50.0% |
| !! | GAACTAGTTGGCTCGTGTAG+TGG | - | chr5.4:69413314-69413333 | None:intergenic | 50.0% |
| ACCTGAGGACCGAAGAGGAT+CGG | - | chr5.4:69410462-69410481 | None:intergenic | 55.0% | |
| AGCAATCATGGACACTCGCC+TGG | - | chr5.4:69416294-69416313 | None:intergenic | 55.0% | |
| AGCTGCGAAGGAACAGCCAT+TGG | - | chr5.4:69416519-69416538 | None:intergenic | 55.0% | |
| AGGTAACAGTGTGGCTGTGG+AGG | + | chr5.4:69414872-69414891 | MS.gene39791:CDS | 55.0% | |
| CATCAGCGTTCTCCATGCCT+AGG | - | chr5.4:69416554-69416573 | None:intergenic | 55.0% | |
| CCTAGATGCCCAGTTATCCC+AGG | - | chr5.4:69414901-69414920 | None:intergenic | 55.0% | |
| CCTGGGATAACTGGGCATCT+AGG | + | chr5.4:69414898-69414917 | MS.gene39791:CDS | 55.0% | |
| CTGAGAAAGGGGGGAATTCC+TGG | + | chr5.4:69414336-69414355 | MS.gene39791:intron | 55.0% | |
| GAACCTGTGAGTCACTCCCA+TGG | - | chr5.4:69416658-69416677 | None:intergenic | 55.0% | |
| GCGCGAGAAACTCAATAGGG+TGG | - | chr5.4:69415307-69415326 | None:intergenic | 55.0% | |
| GGAGCCATGTCTTCACGTTG+TGG | + | chr5.4:69411540-69411559 | MS.gene39791:intron | 55.0% | |
| GGAGGGATCCTGGGATAACT+GGG | + | chr5.4:69414890-69414909 | MS.gene39791:CDS | 55.0% | |
| GGCATGGAGAACGCTGATGT+CGG | + | chr5.4:69416555-69416574 | MS.gene39791:CDS | 55.0% | |
| GGCGCGCGAGAAACTCAATA+GGG | - | chr5.4:69415310-69415329 | None:intergenic | 55.0% | |
| GGTAACAGTGTGGCTGTGGA+GGG | + | chr5.4:69414873-69414892 | MS.gene39791:CDS | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | - | chr5.4:69416203-69416222 | None:intergenic | 55.0% | |
| TATGTATGCCAGCGCTGTGG+TGG | + | chr5.4:69413158-69413177 | MS.gene39791:intron | 55.0% | |
| TGAGATTCCCAGGAGAGTGG+GGG | - | chr5.4:69412424-69412443 | None:intergenic | 55.0% | |
| TGGAGGGATCCTGGGATAAC+TGG | + | chr5.4:69414889-69414908 | MS.gene39791:CDS | 55.0% | |
| TGGAGGTAACAGTGTGGCTG+TGG | + | chr5.4:69414869-69414888 | MS.gene39791:CDS | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | - | chr5.4:69416204-69416223 | None:intergenic | 55.0% | |
| TTCACGACCGGAAGGATCAC+CGG | - | chr5.4:69410355-69410374 | None:intergenic | 55.0% | |
| TTGCCATGGGAGTGACTCAC+AGG | + | chr5.4:69416652-69416671 | MS.gene39791:CDS | 55.0% | |
| TTGTAGGAGGGGGGTAGAAG+AGG | + | chr5.4:69414283-69414302 | MS.gene39791:intron | 55.0% | |
| TTTGGATGGGAAGGGAGGAG+AGG | + | chr5.4:69415889-69415908 | MS.gene39791:intron | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+GGG | - | chr5.4:69416202-69416221 | None:intergenic | 55.0% | |
| ! | ATCGGCGATCTAGAACGACG+AGG | - | chr5.4:69410444-69410463 | None:intergenic | 55.0% |
| ! | GAACGACGAGGACTTTGAGG+CGG | - | chr5.4:69410432-69410451 | None:intergenic | 55.0% |
| ! | TTGGCTCGCTCATGACTGCA+TGG | + | chr5.4:69410792-69410811 | MS.gene39791:intron | 55.0% |
| !! | AGGAAGGTATTGCAGCGAGG+TGG | + | chr5.4:69415008-69415027 | MS.gene39791:intron | 55.0% |
| !! | ATAGGGACTTTTGGGAGGGG+AGG | + | chr5.4:69415945-69415964 | MS.gene39791:intron | 55.0% |
| !! | TAGGGACTTTTGGGAGGGGA+GGG | + | chr5.4:69415946-69415965 | MS.gene39791:intron | 55.0% |
| !! | TGCAGGAAGGTATTGCAGCG+AGG | + | chr5.4:69415005-69415024 | MS.gene39791:intron | 55.0% |
| AGCGAACCTGAGGACCGAAG+AGG | - | chr5.4:69410467-69410486 | None:intergenic | 60.0% | |
| AGGGGAGGGATTTGGAGGGT+GGG | - | chr5.4:69416184-69416203 | None:intergenic | 60.0% | |
| ATTCCCAGGAGAGTGGGGGT+GGG | - | chr5.4:69412420-69412439 | None:intergenic | 60.0% | |
| GAAAGGGGGGAATTCCTGGG+AGG | + | chr5.4:69414340-69414359 | MS.gene39791:intron | 60.0% | |
| GACGGACAAATTCCCGACGC+CGG | + | chr5.4:69410333-69410352 | MS.gene39791:CDS | 60.0% | |
| GCGAGTTTGGATGGGAAGGG+AGG | + | chr5.4:69415884-69415903 | MS.gene39791:intron | 60.0% | |
| GGGAAGGGAGGAGAGGACTT+CGG | + | chr5.4:69415896-69415915 | MS.gene39791:intron | 60.0% | |
| GGGCGCGCGAGAAACTCAAT+AGG | - | chr5.4:69415311-69415330 | None:intergenic | 60.0% | |
| GGTATTGCAGCGAGGTGGCA+AGG | + | chr5.4:69415013-69415032 | MS.gene39791:CDS | 60.0% | |
| TGTGGCTGTGGAGGGATCCT+GGG | + | chr5.4:69414881-69414900 | MS.gene39791:CDS | 60.0% | |
| !! | CTTTTGGGAGGGGAGGGCTT+TGG | + | chr5.4:69415952-69415971 | MS.gene39791:intron | 60.0% |
| ACCGGAAGGATCACCGGCGT+CGG | - | chr5.4:69410349-69410368 | None:intergenic | 65.0% | |
| ACGCTCTTCCACCACAGCGC+TGG | - | chr5.4:69413169-69413188 | None:intergenic | 65.0% | |
| AGGGGAGGGGAGGGATTTGG+AGG | - | chr5.4:69416189-69416208 | None:intergenic | 65.0% | |
| CGAATAGGAGGTGGCGCGTG+AGG | - | chr5.4:69410378-69410397 | None:intergenic | 65.0% | |
| CTCGCGCGCCCTATGCAGTT+CGG | + | chr5.4:69415320-69415339 | MS.gene39791:intron | 65.0% | |
| GAGGGGAGGGATTTGGAGGG+TGG | - | chr5.4:69416185-69416204 | None:intergenic | 65.0% | |
| GATTCCCAGGAGAGTGGGGG+TGG | - | chr5.4:69412421-69412440 | None:intergenic | 65.0% | |
| GCCGATCCTCTTCGGTCCTC+AGG | + | chr5.4:69410458-69410477 | MS.gene39791:CDS | 65.0% | |
| GCGTGAGGTTCACGACCGGA+AGG | - | chr5.4:69410363-69410382 | None:intergenic | 65.0% | |
| GGAGTTTGGAGGGGAGGGGA+GGG | - | chr5.4:69416198-69416217 | None:intergenic | 65.0% | |
| GGGGAGGGGAGGGATTTGGA+GGG | - | chr5.4:69416188-69416207 | None:intergenic | 65.0% | |
| GTGTGGCTGTGGAGGGATCC+TGG | + | chr5.4:69414880-69414899 | MS.gene39791:CDS | 65.0% | |
| TGGAGGGGAGGGGAGGGATT+TGG | - | chr5.4:69416192-69416211 | None:intergenic | 65.0% | |
| TGGCGCGTGAGGTTCACGAC+CGG | - | chr5.4:69410367-69410386 | None:intergenic | 65.0% | |
| TTCCCAGGAGAGTGGGGGTG+GGG | - | chr5.4:69412419-69412438 | None:intergenic | 65.0% | |
| ! | TTGGGAGGGGAGGGCTTTGG+AGG | + | chr5.4:69415955-69415974 | MS.gene39791:intron | 65.0% |
| !! | TCTTTGGGGTGACGGGGTGC+AGG | + | chr5.4:69415562-69415581 | MS.gene39791:intron | 65.0% |
| !! | TGGGAGGGGAGGGCTTTGGA+GGG | + | chr5.4:69415956-69415975 | MS.gene39791:intron | 65.0% |
| CCCGACGCCGGTGATCCTTC+CGG | + | chr5.4:69410345-69410364 | MS.gene39791:CDS | 70.0% | |
| CCGGAAGGATCACCGGCGTC+GGG | - | chr5.4:69410348-69410367 | None:intergenic | 70.0% | |
| GGGAGTTTGGAGGGGAGGGG+AGG | - | chr5.4:69416199-69416218 | None:intergenic | 70.0% | |
| TCCCAGGAGAGTGGGGGTGG+GGG | - | chr5.4:69412418-69412437 | None:intergenic | 70.0% | |
| AGGAGAGTGGGGGTGGGGGG+GGG | - | chr5.4:69412414-69412433 | None:intergenic | 75.0% | |
| CAGGAGAGTGGGGGTGGGGG+GGG | - | chr5.4:69412415-69412434 | None:intergenic | 75.0% | |
| CCAGGAGAGTGGGGGTGGGG+GGG | - | chr5.4:69412416-69412435 | None:intergenic | 75.0% | |
| CCCAGGAGAGTGGGGGTGGG+GGG | - | chr5.4:69412417-69412436 | None:intergenic | 75.0% | |
| CCCCCCACCCCCACTCTCCT+GGG | + | chr5.4:69412414-69412433 | MS.gene39791:intron | 75.0% | |
| ! | AGAGTGGGGGTGGGGGGGGG+GGG | - | chr5.4:69412411-69412430 | None:intergenic | 80.0% |
| ! | CCCCCCCACCCCCACTCTCC+TGG | + | chr5.4:69412413-69412432 | MS.gene39791:intron | 80.0% |
| ! | GAGAGTGGGGGTGGGGGGGG+GGG | - | chr5.4:69412412-69412431 | None:intergenic | 80.0% |
| ! | GGAGAGTGGGGGTGGGGGGG+GGG | - | chr5.4:69412413-69412432 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 69410309 | 69416725 | 69410309 | ID=MS.gene39791 |
| chr5.4 | mRNA | 69410309 | 69416725 | 69410309 | ID=MS.gene39791.t1;Parent=MS.gene39791 |
| chr5.4 | exon | 69410309 | 69410479 | 69410309 | ID=MS.gene39791.t1.exon1;Parent=MS.gene39791.t1 |
| chr5.4 | CDS | 69410309 | 69410479 | 69410309 | ID=cds.MS.gene39791.t1;Parent=MS.gene39791.t1 |
| chr5.4 | exon | 69414741 | 69414919 | 69414741 | ID=MS.gene39791.t1.exon2;Parent=MS.gene39791.t1 |
| chr5.4 | CDS | 69414741 | 69414919 | 69414741 | ID=cds.MS.gene39791.t1;Parent=MS.gene39791.t1 |
| chr5.4 | exon | 69415010 | 69415172 | 69415010 | ID=MS.gene39791.t1.exon3;Parent=MS.gene39791.t1 |
| chr5.4 | CDS | 69415010 | 69415172 | 69415010 | ID=cds.MS.gene39791.t1;Parent=MS.gene39791.t1 |
| chr5.4 | exon | 69416408 | 69416725 | 69416408 | ID=MS.gene39791.t1.exon4;Parent=MS.gene39791.t1 |
| chr5.4 | CDS | 69416408 | 69416725 | 69416408 | ID=cds.MS.gene39791.t1;Parent=MS.gene39791.t1 |
| Gene Sequence |
| Protein sequence |
