AlfalfaGEDB | MS.gene40363

M. sativa cultivar XinJiangDaYe / MS.gene40363

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene40363.t1	AFK44148.1	89.5	153	16	0	1	153	19	171	5.00E-72	280.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene40363.t1	O65695	39.3	89	49	1	31	114	18	106	2.2e-12	73.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene40363.t1	G7J2U8	89.5	153	16	0	1	153	19	171	3.6e-72	280.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene051138	MS.gene40363	0.817566	3.09E-52	-1.69E-46
MS.gene052606	MS.gene40363	0.800707	1.27E-48	-1.69E-46
MS.gene057768	MS.gene40363	0.820951	5.23E-53	-1.69E-46
MS.gene058109	MS.gene40363	0.807914	4.00E-50	-1.69E-46
MS.gene058117	MS.gene40363	0.803514	3.36E-49	-1.69E-46
MS.gene058171	MS.gene40363	0.804674	1.93E-49	-1.69E-46
MS.gene058175	MS.gene40363	0.80673	7.14E-50	-1.69E-46
MS.gene059953	MS.gene40363	0.804438	2.16E-49	-1.69E-46
MS.gene061157	MS.gene40363	0.800417	1.46E-48	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene40363.t1	MTR_3g109160	98.693	153	2	0	1	153	19	171	6.68e-112	315
MS.gene40363.t1	MTR_1g009150	67.485	163	40	5	1	153	20	179	4.55e-70	209
MS.gene40363.t1	MTR_4g021810	70.297	101	23	3	30	123	1	101	9.97e-41	132
MS.gene40363.t1	MTR_4g005320	58.197	122	43	2	1	117	18	136	1.48e-37	126
MS.gene40363.t1	MTR_2g043960	43.548	124	65	3	1	119	21	144	1.82e-25	95.5
MS.gene40363.t1	MTR_4g124750	39.496	119	67	2	1	115	16	133	2.25e-21	84.7
MS.gene40363.t1	MTR_4g072160	40.187	107	62	2	17	122	4	109	2.01e-17	74.3
MS.gene40363.t1	MTR_1g024085	31.469	143	60	3	1	135	17	129	3.12e-17	73.9
MS.gene40363.t1	MTR_4g072570	46.250	80	42	1	38	116	12	91	1.39e-16	70.5
MS.gene40363.t1	MTR_2g066830	33.621	116	73	1	1	112	4	119	2.28e-16	71.6
MS.gene40363.t1	MTR_4g072190	41.667	84	46	1	31	114	19	99	3.18e-16	70.1
MS.gene40363.t1	MTR_7g405740	33.594	128	81	2	1	128	19	142	3.66e-16	71.6
MS.gene40363.t1	MTR_4g072910	51.899	79	36	2	33	110	18	95	5.17e-16	69.3
MS.gene40363.t1	MTR_3g084240	53.731	67	30	1	51	116	25	91	6.89e-16	68.9
MS.gene40363.t1	MTR_3g084170	53.731	67	30	1	51	116	25	91	9.72e-16	68.6
MS.gene40363.t1	MTR_4g050700	58.621	58	23	1	51	107	26	83	1.22e-15	68.2
MS.gene40363.t1	MTR_2g012410	58.621	58	23	1	51	107	26	83	1.22e-15	68.2
MS.gene40363.t1	MTR_3g098970	31.613	155	82	5	1	149	13	149	1.35e-15	69.7
MS.gene40363.t1	MTR_3g117610	41.892	74	43	0	41	114	35	108	1.76e-15	68.2
MS.gene40363.t1	MTR_4g072370	54.098	61	27	1	51	110	23	83	2.95e-15	67.0
MS.gene40363.t1	MTR_8g461210	46.970	66	35	0	49	114	33	98	3.00e-15	67.8
MS.gene40363.t1	MTR_4g072330	54.098	61	27	1	51	110	23	83	3.11e-15	67.0
MS.gene40363.t1	MTR_3g092220	38.000	100	56	2	18	115	4	99	3.35e-15	67.8
MS.gene40363.t1	MTR_3g113310	37.500	104	58	2	16	114	4	105	3.75e-15	67.4
MS.gene40363.t1	MTR_4g072880	49.254	67	33	1	51	116	26	92	4.03e-15	67.0
MS.gene40363.t1	MTR_3g084150	50.746	67	32	1	51	116	25	91	5.19e-15	66.6
MS.gene40363.t1	MTR_3g084180	44.706	85	45	2	33	116	8	91	5.78e-15	66.6
MS.gene40363.t1	MTR_5g021820	40.230	87	49	1	31	114	17	103	6.51e-15	66.6
MS.gene40363.t1	MTR_8g026730	44.118	68	36	1	50	115	26	93	7.26e-15	66.6
MS.gene40363.t1	MTR_4g072240	44.304	79	43	1	33	110	8	86	7.46e-15	66.2
MS.gene40363.t1	MTR_4g072640	45.455	77	41	1	35	110	9	85	8.60e-15	65.9
MS.gene40363.t1	MTR_4g072690	53.226	62	28	1	50	110	19	80	9.33e-15	65.9
MS.gene40363.t1	MTR_4g072740	46.753	77	40	1	35	110	4	80	1.45e-14	65.1
MS.gene40363.t1	MTR_8g461410	49.254	67	33	1	51	116	25	91	1.57e-14	65.5
MS.gene40363.t1	MTR_3g110042	55.738	61	26	1	51	110	25	85	1.71e-14	65.5
MS.gene40363.t1	MTR_4g072220	45.122	82	44	1	30	110	5	86	1.79e-14	65.1
MS.gene40363.t1	MTR_4g072870	47.368	76	38	2	33	107	9	83	1.80e-14	65.1
MS.gene40363.t1	MTR_4g072480	43.750	80	44	1	38	116	12	91	1.88e-14	65.1
MS.gene40363.t1	MTR_5g008370	36.066	122	69	5	30	147	1	117	2.00e-14	66.2
MS.gene40363.t1	MTR_1g059770	42.029	69	40	0	47	115	45	113	2.44e-14	65.9
MS.gene40363.t1	MTR_4g072680	42.500	80	45	1	38	116	12	91	3.05e-14	64.7
MS.gene40363.t1	MTR_4g072660	50.746	67	32	1	51	116	20	86	3.20e-14	64.3
MS.gene40363.t1	MTR_3g084220	50.746	67	32	1	51	116	25	91	3.29e-14	64.7
MS.gene40363.t1	MTR_4g072460	42.500	80	45	1	38	116	12	91	3.51e-14	64.3
MS.gene40363.t1	MTR_4g072470	44.156	77	42	1	35	110	4	80	3.53e-14	64.3
MS.gene40363.t1	MTR_7g118010	47.059	68	34	1	50	115	22	89	3.54e-14	64.7
MS.gene40363.t1	MTR_4g072300	42.683	82	46	1	30	110	5	86	4.19e-14	64.3
MS.gene40363.t1	MTR_4g072500	42.169	83	47	1	35	116	9	91	4.63e-14	64.3
MS.gene40363.t1	MTR_4g072610	54.098	61	27	1	51	110	19	79	4.79e-14	63.9
MS.gene40363.t1	MTR_4g072260	45.570	79	42	1	30	107	5	83	4.80e-14	64.3
MS.gene40363.t1	MTR_4g072270	42.169	83	47	1	35	116	10	92	5.35e-14	63.9
MS.gene40363.t1	MTR_4g072940	54.098	61	27	1	51	110	57	117	5.39e-14	64.7
MS.gene40363.t1	MTR_3g084250	55.172	58	25	1	51	107	25	82	5.74e-14	63.9
MS.gene40363.t1	MTR_4g072250	52.239	67	30	2	51	116	26	91	5.87e-14	63.9
MS.gene40363.t1	MTR_4g072650	52.459	61	28	1	51	110	19	79	6.33e-14	63.5
MS.gene40363.t1	MTR_4g072620	42.500	80	45	1	38	116	12	91	6.82e-14	63.5
MS.gene40363.t1	MTR_4g072890	47.297	74	38	1	30	102	5	78	8.24e-14	63.5
MS.gene40363.t1	MTR_3g110038	54.098	61	27	1	51	110	25	85	8.35e-14	63.5
MS.gene40363.t1	MTR_4g072730	41.250	80	46	1	38	116	12	91	1.31e-13	63.2
MS.gene40363.t1	MTR_7g104940	45.161	62	34	0	54	115	53	114	1.68e-13	63.5
MS.gene40363.t1	MTR_3g110032	43.373	83	46	1	35	116	10	92	1.87e-13	62.8
MS.gene40363.t1	MTR_4g072310	42.169	83	47	1	35	116	10	92	2.06e-13	62.4
MS.gene40363.t1	MTR_4g072490	42.857	77	43	1	35	110	4	80	2.07e-13	62.4
MS.gene40363.t1	MTR_4g072720	52.459	61	28	1	51	110	21	81	2.15e-13	62.4
MS.gene40363.t1	MTR_4g072530	42.857	77	43	1	35	110	9	85	2.22e-13	62.4
MS.gene40363.t1	MTR_8g101530	45.714	70	38	0	49	118	38	107	2.44e-13	63.5
MS.gene40363.t1	MTR_4g072820	51.667	60	28	1	49	107	18	77	2.60e-13	62.0
MS.gene40363.t1	MTR_1g061570	46.970	66	35	0	51	116	19	84	3.06e-13	62.8
MS.gene40363.t1	MTR_4g072560	44.186	86	44	3	32	115	15	98	3.18e-13	62.0
MS.gene40363.t1	MTR_8g076040	36.782	87	52	1	31	114	18	104	3.80e-13	62.0
MS.gene40363.t1	MTR_4g072630	50.000	62	30	1	51	111	21	82	3.95e-13	61.6
MS.gene40363.t1	MTR_3g084260	53.448	58	26	1	51	107	26	83	4.36e-13	61.6
MS.gene40363.t1	MTR_4g072510	50.820	61	29	1	51	110	21	81	4.95e-13	61.2
MS.gene40363.t1	MTR_3g117630	54.098	61	27	1	51	110	25	85	5.61e-13	61.2
MS.gene40363.t1	MTR_7g104950	43.548	62	35	0	54	115	53	114	6.66e-13	62.0
MS.gene40363.t1	MTR_4g072540	50.820	61	29	1	51	110	21	81	8.18e-13	60.8
MS.gene40363.t1	MTR_4g072450	50.000	62	30	1	50	110	19	80	9.37e-13	60.5
MS.gene40363.t1	MTR_4g072465	50.820	61	29	1	51	110	21	81	1.73e-12	60.1
MS.gene40363.t1	MTR_4g072850	52.459	61	28	1	51	110	27	87	1.99e-12	60.1
MS.gene40363.t1	MTR_4g072580	49.180	61	30	1	51	110	20	80	2.17e-12	59.7
MS.gene40363.t1	MTR_4g072670	50.820	61	29	1	51	110	21	81	2.31e-12	59.7
MS.gene40363.t1	MTR_4g072830	43.590	78	33	2	51	127	23	90	2.60e-12	59.7
MS.gene40363.t1	MTR_4g072590	50.000	58	28	1	51	107	20	77	2.64e-12	59.3
MS.gene40363.t1	MTR_4g025830	42.105	76	40	2	47	118	75	150	2.79e-12	61.2
MS.gene40363.t1	MTR_3g084200	59.091	44	18	0	51	94	25	68	4.49e-12	59.3
MS.gene40363.t1	MTR_4g072230	52.459	61	26	2	51	110	26	84	4.54e-12	58.9
MS.gene40363.t1	MTR_3g110045	53.448	58	26	1	51	107	84	141	6.56e-12	60.1
MS.gene40363.t1	MTR_4g072600	50.820	61	29	1	51	110	20	80	7.98e-12	58.2
MS.gene40363.t1	MTR_4g072860	49.254	67	33	1	51	116	26	92	8.11e-12	58.5
MS.gene40363.t1	MTR_0388s0020	35.052	97	58	2	26	119	52	146	8.19e-12	59.7
MS.gene40363.t1	MTR_4g005310	38.824	85	45	2	34	111	40	124	1.20e-11	59.3
MS.gene40363.t1	MTR_4g072280	50.000	60	30	0	33	92	8	67	1.29e-11	57.4
MS.gene40363.t1	MTR_6g077850	38.554	83	48	2	34	115	19	99	1.47e-11	57.8
MS.gene40363.t1	MTR_5g008360	40.741	81	47	1	37	116	2	82	1.48e-11	57.4
MS.gene40363.t1	MTR_7g101920	42.105	76	42	1	39	112	23	98	1.65e-11	58.2
MS.gene40363.t1	MTR_1g094750	50.820	61	30	0	51	111	50	110	1.80e-11	58.2
MS.gene40363.t1	MTR_8g461420	51.724	58	27	1	51	107	25	82	2.20e-11	57.4
MS.gene40363.t1	MTR_3g084210	46.269	67	35	1	51	116	25	91	2.25e-11	57.0
MS.gene40363.t1	MTR_5g008350	51.923	52	24	1	52	102	21	72	2.56e-11	56.6
MS.gene40363.t1	MTR_4g072770	45.588	68	36	1	49	115	13	80	4.09e-11	56.2
MS.gene40363.t1	MTR_3g084190	50.000	58	28	1	51	107	25	82	4.54e-11	56.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene40363.t1	AT4G31320	51.685	178	55	5	1	153	18	189	1.51e-48	155
MS.gene40363.t1	AT2G24400	51.445	173	52	6	1	153	18	178	1.89e-47	152
MS.gene40363.t1	AT3G43120	40.769	130	69	2	1	122	21	150	5.13e-25	94.4
MS.gene40363.t1	AT5G20810	43.089	123	62	3	1	115	21	143	4.46e-23	89.4
MS.gene40363.t1	AT5G20810	43.089	123	62	3	1	115	21	143	7.00e-23	89.7
MS.gene40363.t1	AT3G12830	33.929	112	70	2	1	112	4	111	1.67e-17	74.3
MS.gene40363.t1	AT4G34760	39.326	89	49	1	31	114	18	106	2.32e-17	73.2
MS.gene40363.t1	AT1G79130	36.522	115	61	2	1	112	4	109	2.44e-17	73.9
MS.gene40363.t1	AT4G36110	42.268	97	54	2	19	113	6	102	5.55e-17	72.0
MS.gene40363.t1	AT1G56150	33.929	112	58	1	1	112	4	99	6.60e-17	72.0
MS.gene40363.t1	AT3G20220	40.404	99	57	2	14	111	11	108	1.71e-16	71.2
MS.gene40363.t1	AT3G61900	52.239	67	29	1	51	114	30	96	2.37e-16	71.2
MS.gene40363.t1	AT4G34750	47.297	74	35	1	45	114	27	100	1.68e-15	69.3
MS.gene40363.t1	AT4G34750	47.297	74	35	1	45	114	27	100	1.68e-15	69.3
MS.gene40363.t1	AT1G75580	39.604	101	53	2	22	114	7	107	2.04e-15	68.2
MS.gene40363.t1	AT2G16580	33.333	120	59	2	1	114	3	107	2.12e-15	68.2
MS.gene40363.t1	AT2G21210	48.193	83	35	3	28	107	10	87	4.74e-15	67.0
MS.gene40363.t1	AT5G66260	40.000	85	50	1	31	114	13	97	4.96e-15	67.0
MS.gene40363.t1	AT1G19840	51.562	64	31	0	51	114	41	104	5.63e-15	68.2
MS.gene40363.t1	AT2G21220	40.230	87	49	1	31	114	17	103	8.63e-15	66.2
MS.gene40363.t1	AT4G38860	39.806	103	56	3	16	114	4	104	9.04e-15	66.2
MS.gene40363.t1	AT2G18010	46.032	63	34	0	51	113	48	110	1.25e-14	66.2
MS.gene40363.t1	AT2G21210	42.056	107	50	5	12	107	49	154	1.69e-14	67.4
MS.gene40363.t1	AT5G10990	47.887	71	37	0	51	121	41	111	2.28e-14	66.6
MS.gene40363.t1	AT2G46690	42.857	70	37	1	51	117	24	93	3.62e-14	65.1
MS.gene40363.t1	AT4G38840	55.932	59	24	2	51	107	33	91	5.84e-14	64.3
MS.gene40363.t1	AT4G00880	47.887	71	35	1	47	115	24	94	8.08e-14	64.3
MS.gene40363.t1	AT1G19830	42.254	71	41	0	41	111	38	108	9.39e-14	63.9
MS.gene40363.t1	AT3G60690	42.683	82	40	2	49	127	86	163	1.28e-13	65.1
MS.gene40363.t1	AT4G34770	43.750	96	47	4	27	116	9	103	2.56e-13	62.8
MS.gene40363.t1	AT1G75590	50.000	64	32	0	51	114	42	105	4.25e-13	63.2
MS.gene40363.t1	AT1G16510	42.424	66	38	0	49	114	52	117	5.40e-13	62.8
MS.gene40363.t1	AT3G51200	46.154	65	34	1	51	114	39	103	3.54e-12	59.7
MS.gene40363.t1	AT4G12410	42.667	75	40	1	47	118	72	146	4.50e-12	60.5
MS.gene40363.t1	AT5G53590	41.429	70	36	1	51	115	46	115	5.64e-12	60.1
MS.gene40363.t1	AT4G34800	49.231	65	29	2	51	111	21	85	8.79e-12	58.5
MS.gene40363.t1	AT3G03850	41.758	91	46	3	33	116	3	93	1.17e-11	58.2
MS.gene40363.t1	AT4G22620	43.056	72	38	1	50	118	78	149	1.31e-11	59.3
MS.gene40363.t1	AT5G18080	45.312	64	33	2	46	107	19	82	1.80e-11	57.4
MS.gene40363.t1	AT4G38825	42.857	63	34	2	50	110	22	84	1.91e-11	57.4
MS.gene40363.t1	AT4G13790	42.647	68	36	2	50	114	24	91	2.51e-11	57.0
MS.gene40363.t1	AT5G18010	43.421	76	37	3	34	107	11	82	6.24e-11	55.8
MS.gene40363.t1	AT5G18030	44.444	63	33	2	47	107	18	80	7.84e-11	55.8

Find 34 sgRNAs with CRISPR-Local

Find 33 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGTTATACCAACTGAGTATT+TGG	0.160089	3.3:-89154915	MS.gene40363:CDS
AGAGAAGCTGAAGAAGAATT+TGG	0.168030	3.3:-89154866	MS.gene40363:CDS
CTACTCTTCTCCATTTCTTA+AGG	0.303486	3.3:+89155113	None:intergenic
GTGTTGGTGTAGACCTTAAC+AGG	0.314144	3.3:-89154940	MS.gene40363:CDS
TCTACTCAGAAATGTAGATT+TGG	0.343922	3.3:-89154755	MS.gene40363:CDS
GAGAAGCTGAAGAAGAATTT+GGG	0.377927	3.3:-89154865	MS.gene40363:CDS
TTCAACAGATCCTTAAGAAA+TGG	0.395955	3.3:-89155123	None:intergenic
GAATTTGGGTTTGAACAAAC+TGG	0.403966	3.3:-89154851	MS.gene40363:CDS
TGATCCTCCTCCTTCCCGTT+CGG	0.422045	3.3:+89154997	None:intergenic
TTGGTATAACAAACCTGTTA+AGG	0.460530	3.3:+89154927	None:intergenic
ATTTGGCATTGAAAAGATGA+TGG	0.461164	3.3:-89154738	MS.gene40363:CDS
ATAATAACCAAGTTGGTTTG+AGG	0.468390	3.3:+89154706	None:intergenic
AACACTTTCAATGTCCGAAC+GGG	0.473602	3.3:-89155011	MS.gene40363:CDS
CTTGAAGATGGTTGAAGGAA+AGG	0.483489	3.3:-89154786	MS.gene40363:CDS
TACTGTTCCTCAAACCAACT+TGG	0.509698	3.3:-89154713	MS.gene40363:CDS
GGCTACCTAGCCGTTTGTGT+TGG	0.517754	3.3:-89154956	MS.gene40363:CDS
GTTGATGATAATAACCAAGT+TGG	0.520248	3.3:+89154699	None:intergenic
CAAACGGCTAGGTAGCCTTT+CGG	0.521166	3.3:+89154962	None:intergenic
TATCTGCACATTGGACTATG+AGG	0.522020	3.3:+89154677	None:intergenic
AGTATCTTGAAGATGGTTGA+AGG	0.527345	3.3:-89154791	MS.gene40363:CDS
GTTTGAGAGTATCTTGAAGA+TGG	0.543069	3.3:-89154798	MS.gene40363:CDS
AAGGTCTACACCAACACAAA+CGG	0.549240	3.3:+89154946	None:intergenic
TTTGGCATTGAAAAGATGAT+GGG	0.560948	3.3:-89154737	MS.gene40363:CDS
ATGTCCGAACGGGAAGGAGG+AGG	0.563260	3.3:-89155001	MS.gene40363:CDS
TCAAACAACGCGGTTCCGAA+AGG	0.566250	3.3:-89154977	MS.gene40363:CDS
TTCTCTGAGTAATATATGAA+AGG	0.569528	3.3:+89154883	None:intergenic
TGATGAGCCAAATACTCAGT+TGG	0.592407	3.3:+89154908	None:intergenic
ATGACAAACTATCTGCACAT+TGG	0.610970	3.3:+89154668	None:intergenic
GAACACTTTCAATGTCCGAA+CGG	0.618386	3.3:-89155012	MS.gene40363:CDS
TCAATGTCCGAACGGGAAGG+AGG	0.628171	3.3:-89155004	MS.gene40363:CDS
CTACACCAACACAAACGGCT+AGG	0.632675	3.3:+89154951	None:intergenic
CTTTCAATGTCCGAACGGGA+AGG	0.652936	3.3:-89155007	MS.gene40363:CDS
TCAAACACTGAAACTTCACA+AGG	0.665855	3.3:+89154815	None:intergenic
AGGAGGAGGATCAAACAACG+CGG	0.824181	3.3:-89154987	MS.gene40363:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TTCTCTGAGTAATATATGAA+AGG	+	chr3.3:89154911-89154930	None:intergenic	25.0%
!!!	TCTGTTTGTTTTTGAAGTAT+TGG	+	chr3.3:89154704-89154723	None:intergenic	25.0%
	TCTACTCAGAAATGTAGATT+TGG	-	chr3.3:89155036-89155055	MS.gene40363:CDS	30.0%
	TGTTATACCAACTGAGTATT+TGG	-	chr3.3:89154876-89154895	MS.gene40363:CDS	30.0%
	TTGGTATAACAAACCTGTTA+AGG	+	chr3.3:89154867-89154886	None:intergenic	30.0%
!	ATTTGGCATTGAAAAGATGA+TGG	-	chr3.3:89155053-89155072	MS.gene40363:CDS	30.0%
!	TTTGGCATTGAAAAGATGAT+GGG	-	chr3.3:89155054-89155073	MS.gene40363:CDS	30.0%
!!	ATAATAACCAAGTTGGTTTG+AGG	+	chr3.3:89155088-89155107	None:intergenic	30.0%
!!	GTTGATGATAATAACCAAGT+TGG	+	chr3.3:89155095-89155114	None:intergenic	30.0%
	AGAGAAGCTGAAGAAGAATT+TGG	-	chr3.3:89154925-89154944	MS.gene40363:CDS	35.0%
	AGTATCTTGAAGATGGTTGA+AGG	-	chr3.3:89155000-89155019	MS.gene40363:CDS	35.0%
	CTACTCTTCTCCATTTCTTA+AGG	+	chr3.3:89154681-89154700	None:intergenic	35.0%
	GAGAAGCTGAAGAAGAATTT+GGG	-	chr3.3:89154926-89154945	MS.gene40363:CDS	35.0%
	TCAAACACTGAAACTTCACA+AGG	+	chr3.3:89154979-89154998	None:intergenic	35.0%
!	GAATTTGGGTTTGAACAAAC+TGG	-	chr3.3:89154940-89154959	MS.gene40363:CDS	35.0%
!!	GTTTGAGAGTATCTTGAAGA+TGG	-	chr3.3:89154993-89155012	MS.gene40363:CDS	35.0%
	AACACTTTCAATGTCCGAAC+GGG	-	chr3.3:89154780-89154799	MS.gene40363:CDS	40.0%
	AAGGTCTACACCAACACAAA+CGG	+	chr3.3:89154848-89154867	None:intergenic	40.0%
	CTTGAAGATGGTTGAAGGAA+AGG	-	chr3.3:89155005-89155024	MS.gene40363:CDS	40.0%
	GAACACTTTCAATGTCCGAA+CGG	-	chr3.3:89154779-89154798	MS.gene40363:CDS	40.0%
	TACTGTTCCTCAAACCAACT+TGG	-	chr3.3:89155078-89155097	MS.gene40363:CDS	40.0%
	TATCTGCACATTGGACTATG+AGG	+	chr3.3:89155117-89155136	None:intergenic	40.0%
	TGATGAGCCAAATACTCAGT+TGG	+	chr3.3:89154886-89154905	None:intergenic	40.0%
!	GTGTTGGTGTAGACCTTAAC+AGG	-	chr3.3:89154851-89154870	MS.gene40363:CDS	45.0%
	AGGAGGAGGATCAAACAACG+CGG	-	chr3.3:89154804-89154823	MS.gene40363:CDS	50.0%
	CAAACGGCTAGGTAGCCTTT+CGG	+	chr3.3:89154832-89154851	None:intergenic	50.0%
	CTACACCAACACAAACGGCT+AGG	+	chr3.3:89154843-89154862	None:intergenic	50.0%
	CTTTCAATGTCCGAACGGGA+AGG	-	chr3.3:89154784-89154803	MS.gene40363:CDS	50.0%
	TCAAACAACGCGGTTCCGAA+AGG	-	chr3.3:89154814-89154833	MS.gene40363:CDS	50.0%
	GGCTACCTAGCCGTTTGTGT+TGG	-	chr3.3:89154835-89154854	MS.gene40363:CDS	55.0%
	TCAATGTCCGAACGGGAAGG+AGG	-	chr3.3:89154787-89154806	MS.gene40363:CDS	55.0%
	TGATCCTCCTCCTTCCCGTT+CGG	+	chr3.3:89154797-89154816	None:intergenic	55.0%
	ATGTCCGAACGGGAAGGAGG+AGG	-	chr3.3:89154790-89154809	MS.gene40363:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.3	gene	89154676	89155137	89154676	ID=MS.gene40363
chr3.3	mRNA	89154676	89155137	89154676	ID=MS.gene40363.t1;Parent=MS.gene40363
chr3.3	exon	89154676	89155137	89154676	ID=MS.gene40363.t1.exon1;Parent=MS.gene40363.t1
chr3.3	CDS	89154676	89155137	89154676	ID=cds.MS.gene40363.t1;Parent=MS.gene40363.t1

Gene Sequence

>MS.gene40363

ATCCTTAAGAAATGGAGAAGAGTAGCCAATACTTCAAAAACAAACAGAAGCAGCAGCAACAATAACAACAGTACTACTAGTAAAAGCATAAAGTTTCTGAAAAGAACACTTTCAATGTCCGAACGGGAAGGAGGAGGATCAAACAACGCGGTTCCGAAAGGCTACCTAGCCGTTTGTGTTGGTGTAGACCTTAACAGGTTTGTTATACCAACTGAGTATTTGGCTCATCAAGCCTTTCATATATTACTCAGAGAAGCTGAAGAAGAATTTGGGTTTGAACAAACTGGTGTTCTGAGAATTCCTTGTGAAGTTTCAGTGTTTGAGAGTATCTTGAAGATGGTTGAAGGAAAGGATAGATTTTCTACTCAGAAATGTAGATTTGGCATTGAAAAGATGATGGGATACTGTTCCTCAAACCAACTTGGTTATTATCATCAACCTCATAGTCCAATGTGCAGATAG

Protein sequence

>MS.gene40363.t1

ILKKWRRVANTSKTNRSSSNNNNSTTSKSIKFLKRTLSMSEREGGGSNNAVPKGYLAVCVGVDLNRFVIPTEYLAHQAFHILLREAEEEFGFEQTGVLRIPCEVSVFESILKMVEGKDRFSTQKCRFGIEKMMGYCSSNQLGYYHQPHSPMCR