AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058117


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058117.t1 MTR_5g007820 97.340 188 5 0 262 449 1 188 4.24e-132 379
MS.gene058117.t1 MTR_5g007820 85.143 175 26 0 43 217 1 175 6.88e-107 315
MS.gene058117.t1 MTR_5g007840 73.973 219 10 2 262 447 1 205 9.42e-105 310
MS.gene058117.t1 MTR_5g007840 65.700 207 24 2 43 216 1 193 3.77e-85 259
MS.gene058117.t1 MTR_4g077640 77.368 190 41 1 262 451 1 188 2.96e-104 308
MS.gene058117.t1 MTR_4g077640 76.705 176 39 1 43 218 1 174 4.13e-98 292
MS.gene058117.t1 MTR_5g007810 78.261 184 38 1 262 445 1 182 3.45e-103 305
MS.gene058117.t1 MTR_5g007810 78.409 176 36 1 43 218 1 174 3.82e-101 300
MS.gene058117.t1 MTR_7g109960 56.044 182 78 1 262 443 1 180 8.09e-73 227
MS.gene058117.t1 MTR_7g109960 57.143 175 73 1 43 217 1 173 1.15e-70 222
MS.gene058117.t1 MTR_1g086480 56.044 182 78 1 262 443 1 180 1.26e-72 227
MS.gene058117.t1 MTR_1g086480 57.143 175 73 1 43 217 1 173 1.50e-70 221
MS.gene058117.t1 MTR_6g005820 56.044 182 78 1 262 443 1 180 1.96e-72 226
MS.gene058117.t1 MTR_6g005820 57.143 175 73 1 43 217 1 173 2.63e-70 221
MS.gene058117.t1 MTR_5g034130 56.044 182 78 1 262 443 1 180 2.54e-72 226
MS.gene058117.t1 MTR_5g034130 57.143 175 73 1 43 217 1 173 3.09e-70 221
MS.gene058117.t1 MTR_5g034125 56.044 182 78 1 262 443 1 180 2.54e-72 226
MS.gene058117.t1 MTR_5g034125 57.143 175 73 1 43 217 1 173 3.09e-70 221
MS.gene058117.t1 MTR_5g016540 53.846 182 82 1 262 443 1 180 6.57e-70 220
MS.gene058117.t1 MTR_5g016540 55.429 175 76 1 43 217 1 173 1.57e-69 219
MS.gene058117.t1 MTR_4g128910 53.889 180 81 1 262 441 1 178 6.74e-66 209
MS.gene058117.t1 MTR_4g128910 53.714 175 79 1 43 217 1 173 1.05e-61 199
MS.gene058117.t1 MTR_1g076550 46.703 182 95 1 262 443 1 180 2.10e-52 174
MS.gene058117.t1 MTR_1g076550 45.143 175 94 1 43 217 1 173 8.69e-49 165
MS.gene058117.t1 MTR_8g077540 41.317 167 93 4 279 443 17 180 1.99e-38 138
MS.gene058117.t1 MTR_8g077540 40.252 159 92 2 60 217 17 173 3.90e-36 132
MS.gene058117.t1 MTR_8g077540 41.317 167 93 4 279 443 43 206 5.52e-38 137
MS.gene058117.t1 MTR_8g077540 40.252 159 92 2 60 217 43 199 8.66e-36 132
MS.gene058117.t1 MTR_2g022200 30.612 196 121 3 262 447 1 191 2.67e-26 105
MS.gene058117.t1 MTR_2g022200 30.857 175 112 3 50 217 8 180 2.27e-24 100
MS.gene058117.t1 MTR_5g078090 35.172 145 91 2 272 415 13 155 8.97e-23 95.5
MS.gene058117.t1 MTR_5g078090 31.724 145 96 2 53 196 13 155 6.30e-21 90.5
MS.gene058117.t1 MTR_5g015370 30.387 181 123 2 264 443 5 183 3.49e-22 94.0
MS.gene058117.t1 MTR_5g015370 27.528 178 126 2 45 221 5 180 5.53e-20 87.8
MS.gene058117.t1 MTR_8g077540 44.444 99 51 3 279 376 17 112 9.74e-22 90.9
MS.gene058117.t1 MTR_8g077540 40.816 98 56 1 60 157 17 112 1.06e-20 88.2
MS.gene058117.t1 MTR_2g034640 29.381 194 113 5 269 441 3 193 5.00e-21 90.9
MS.gene058117.t1 MTR_2g034640 30.405 148 93 2 50 189 3 148 3.42e-19 85.9
MS.gene058117.t1 MTR_7g112090 34.848 132 82 2 278 408 20 148 2.74e-20 89.0
MS.gene058117.t1 MTR_7g112090 31.081 148 92 2 50 189 3 148 6.08e-19 85.1
MS.gene058117.t1 MTR_4g121860 29.944 177 108 4 278 441 20 193 2.89e-19 85.9
MS.gene058117.t1 MTR_4g121860 31.081 148 92 2 50 189 3 148 6.26e-19 85.1
MS.gene058117.t1 MTR_4g026950 27.711 166 117 2 279 443 1 164 8.35e-17 78.2
MS.gene058117.t1 MTR_4g026950 25.767 163 118 2 60 221 1 161 2.04e-16 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058117.t1 AT5G17060 75.263 190 45 1 262 451 1 188 8.04e-102 302
MS.gene058117.t1 AT5G17060 76.705 176 39 1 43 218 1 174 5.06e-98 292
MS.gene058117.t1 AT5G17060 75.263 190 45 1 262 451 1 188 8.04e-102 302
MS.gene058117.t1 AT5G17060 76.705 176 39 1 43 218 1 174 5.06e-98 292
MS.gene058117.t1 AT3G03120 74.737 190 46 1 262 451 1 188 5.05e-101 300
MS.gene058117.t1 AT3G03120 75.000 176 42 1 43 218 1 174 4.58e-96 287
MS.gene058117.t1 AT1G10630 56.044 182 78 1 262 443 1 180 7.53e-73 227
MS.gene058117.t1 AT1G10630 57.143 175 73 1 43 217 1 173 1.14e-70 222
MS.gene058117.t1 AT1G10630 56.044 182 78 1 262 443 1 180 7.53e-73 227
MS.gene058117.t1 AT1G10630 57.143 175 73 1 43 217 1 173 1.14e-70 222
MS.gene058117.t1 AT2G47170 56.044 182 78 1 262 443 1 180 2.07e-72 226
MS.gene058117.t1 AT2G47170 57.143 175 73 1 43 217 1 173 3.00e-70 221
MS.gene058117.t1 AT2G47170 56.044 182 78 1 262 443 1 180 2.07e-72 226
MS.gene058117.t1 AT2G47170 57.143 175 73 1 43 217 1 173 3.00e-70 221
MS.gene058117.t1 AT2G47170 56.044 182 78 1 262 443 1 180 2.07e-72 226
MS.gene058117.t1 AT2G47170 57.143 175 73 1 43 217 1 173 3.00e-70 221
MS.gene058117.t1 AT3G62290 56.044 182 78 1 262 443 1 180 2.68e-72 226
MS.gene058117.t1 AT3G62290 57.143 175 73 1 43 217 1 173 3.27e-70 221
MS.gene058117.t1 AT3G62290 56.044 182 78 1 262 443 1 180 2.68e-72 226
MS.gene058117.t1 AT3G62290 57.143 175 73 1 43 217 1 173 3.27e-70 221
MS.gene058117.t1 AT3G62290 56.044 182 78 1 262 443 1 180 2.68e-72 226
MS.gene058117.t1 AT3G62290 57.143 175 73 1 43 217 1 173 3.27e-70 221
MS.gene058117.t1 AT1G70490 56.044 182 78 1 262 443 1 180 2.83e-72 226
MS.gene058117.t1 AT1G70490 57.143 175 73 1 43 217 1 173 1.81e-70 221
MS.gene058117.t1 AT1G70490 56.044 182 78 1 262 443 1 180 2.83e-72 226
MS.gene058117.t1 AT1G70490 57.143 175 73 1 43 217 1 173 1.81e-70 221
MS.gene058117.t1 AT1G70490 56.044 182 78 1 262 443 1 180 2.83e-72 226
MS.gene058117.t1 AT1G70490 57.143 175 73 1 43 217 1 173 1.81e-70 221
MS.gene058117.t1 AT1G70490 56.044 182 78 1 262 443 1 180 2.83e-72 226
MS.gene058117.t1 AT1G70490 57.143 175 73 1 43 217 1 173 1.81e-70 221
MS.gene058117.t1 AT1G70490 56.044 182 78 1 262 443 1 180 2.83e-72 226
MS.gene058117.t1 AT1G70490 57.143 175 73 1 43 217 1 173 1.81e-70 221
MS.gene058117.t1 AT1G70490 56.044 182 78 1 262 443 1 180 2.83e-72 226
MS.gene058117.t1 AT1G70490 57.143 175 73 1 43 217 1 173 1.81e-70 221
MS.gene058117.t1 AT1G23490 56.044 182 78 1 262 443 1 180 2.83e-72 226
MS.gene058117.t1 AT1G23490 57.143 175 73 1 43 217 1 173 1.81e-70 221
MS.gene058117.t1 AT1G70490 56.044 182 78 1 262 443 1 180 2.83e-72 226
MS.gene058117.t1 AT1G70490 57.143 175 73 1 43 217 1 173 1.81e-70 221
MS.gene058117.t1 AT5G14670 56.044 182 78 1 262 443 1 180 5.71e-72 225
MS.gene058117.t1 AT5G14670 57.143 175 73 1 43 217 1 173 5.43e-70 220
MS.gene058117.t1 AT5G14670 56.044 182 78 1 262 443 1 180 5.71e-72 225
MS.gene058117.t1 AT5G14670 57.143 175 73 1 43 217 1 173 5.43e-70 220
MS.gene058117.t1 AT5G14670 56.044 182 78 1 262 443 1 180 9.83e-72 224
MS.gene058117.t1 AT5G14670 56.818 176 74 1 43 218 1 174 1.04e-69 219
MS.gene058117.t1 AT2G24765 54.444 180 80 1 262 441 1 178 7.24e-67 212
MS.gene058117.t1 AT2G24765 53.143 175 80 1 43 217 1 173 5.47e-62 199
MS.gene058117.t1 AT3G03120 74.242 132 32 1 43 174 1 130 2.73e-66 209
MS.gene058117.t1 AT3G03120 73.485 132 33 1 262 393 1 130 1.26e-63 202
MS.gene058117.t1 AT2G15310 50.556 180 87 1 43 222 1 178 4.55e-61 198
MS.gene058117.t1 AT2G15310 46.809 188 98 1 262 449 1 186 2.92e-60 196
MS.gene058117.t1 AT3G22950 47.027 185 96 1 262 446 1 183 8.98e-55 181
MS.gene058117.t1 AT3G22950 47.126 174 90 1 43 216 1 172 2.75e-51 172
MS.gene058117.t1 AT3G22950 47.027 185 96 1 262 446 1 183 8.98e-55 181
MS.gene058117.t1 AT3G22950 47.126 174 90 1 43 216 1 172 2.75e-51 172
MS.gene058117.t1 AT1G02430 43.716 183 95 4 43 217 1 183 3.56e-46 158
MS.gene058117.t1 AT1G02430 42.077 183 98 4 262 436 1 183 2.50e-42 148
MS.gene058117.t1 AT2G24765 53.846 130 58 1 262 391 1 128 4.75e-45 154
MS.gene058117.t1 AT2G24765 53.077 130 59 1 43 172 1 128 4.32e-43 148
MS.gene058117.t1 AT1G02440 40.984 183 100 3 43 217 1 183 1.61e-43 151
MS.gene058117.t1 AT1G02440 40.437 183 101 4 262 436 1 183 7.75e-41 144
MS.gene058117.t1 AT2G18390 41.317 167 93 4 279 443 17 180 8.87e-39 139
MS.gene058117.t1 AT2G18390 40.252 159 92 2 60 217 17 173 1.54e-36 133
MS.gene058117.t1 AT1G02430 41.250 160 90 3 43 198 1 160 6.16e-36 130
MS.gene058117.t1 AT1G02430 38.750 160 94 3 262 417 1 160 1.29e-31 119
MS.gene058117.t1 AT5G52210 30.645 186 120 2 269 447 8 191 3.98e-27 108
MS.gene058117.t1 AT5G52210 31.429 175 111 3 50 217 8 180 7.18e-25 102
MS.gene058117.t1 AT5G52210 30.645 186 120 2 269 447 8 191 3.98e-27 108
MS.gene058117.t1 AT5G52210 31.429 175 111 3 50 217 8 180 7.18e-25 102
MS.gene058117.t1 AT3G49870 31.492 181 121 2 264 443 5 183 1.16e-22 95.1
MS.gene058117.t1 AT3G49870 30.726 179 119 4 45 221 5 180 1.60e-20 89.4
MS.gene058117.t1 AT5G37680 33.793 145 93 2 272 415 13 155 7.53e-22 93.2
MS.gene058117.t1 AT5G37680 28.814 177 117 4 53 225 13 184 1.30e-20 89.7
MS.gene058117.t1 AT3G49860 31.737 167 111 2 278 443 11 175 1.60e-21 92.0
MS.gene058117.t1 AT3G49860 32.374 139 91 2 59 196 11 147 2.66e-20 88.6
MS.gene058117.t1 AT5G67560 32.895 152 99 2 265 415 6 155 1.05e-20 89.7
MS.gene058117.t1 AT5G67560 30.899 178 118 4 46 221 6 180 3.03e-20 88.6
MS.gene058117.t1 AT3G49870 31.325 166 111 2 279 443 1 164 3.39e-20 87.8
MS.gene058117.t1 AT3G49870 31.707 164 107 4 60 221 1 161 1.62e-19 85.9
MS.gene058117.t1 AT3G62560 31.214 173 103 5 278 437 20 189 5.42e-20 88.2
MS.gene058117.t1 AT3G62560 30.405 148 93 2 50 189 3 148 1.81e-18 83.6
MS.gene058117.t1 AT4G02080 29.379 177 109 4 278 441 20 193 9.20e-20 87.4
MS.gene058117.t1 AT4G02080 29.054 148 95 2 50 189 3 148 1.03e-17 81.6
MS.gene058117.t1 AT1G56330 31.544 149 90 3 269 408 3 148 3.21e-19 85.9
MS.gene058117.t1 AT1G56330 30.405 148 93 2 50 189 3 148 1.56e-18 84.0
MS.gene058117.t1 AT1G09180 27.461 193 118 4 269 441 3 193 7.96e-19 84.7
MS.gene058117.t1 AT1G09180 31.081 148 92 2 50 189 3 148 2.56e-18 83.2
MS.gene058117.t1 AT1G02440 29.936 157 72 2 43 198 1 120 1.29e-17 79.3
MS.gene058117.t1 AT1G02440 29.299 157 73 4 262 417 1 120 7.44e-17 77.0
MS.gene058117.t1 AT5G37680 29.197 137 89 3 88 221 2 133 1.11e-16 77.0
MS.gene058117.t1 AT5G37680 33.945 109 70 1 307 415 2 108 1.43e-16 76.6

Find 95 sgRNAs with CRISPR-Local

Find 373 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGTAAAGCAGGAATTTC+AGG 0.230057 5.4:+3115158 MS.gene058117:CDS
AAGCTTTCAAGTGGTTATTA+TGG 0.232257 5.4:+3114083 MS.gene058117:CDS
TCAAGCAAAGCACGAATTTC+AGG 0.235756 5.4:+3111799 MS.gene058117:CDS
TTATTATGGGTCAAGCTTTC+CGG 0.262750 5.4:+3114097 MS.gene058117:CDS
AAGCATAGAAGGCTCGTTTA+TGG 0.277630 5.4:-3115272 None:intergenic
GAAAGCTTCCAAAGTGGTTA+TGG 0.278589 5.4:+3110046 MS.gene058117:CDS
ATACTCTATAAGCTCCAAAT+TGG 0.290471 5.4:+3110253 MS.gene058117:CDS
ATACTCTATAAGCTTCAAAT+TGG 0.296040 5.4:+3114275 MS.gene058117:CDS
AAGCTGTTCGACACATTCTT+TGG 0.303707 5.4:+3110083 MS.gene058117:CDS
AGCTTTCAATTTCAATTCTC+TGG 0.314934 5.4:-3110030 None:intergenic
TGGTTATGGGTCAAGCTTTA+CGG 0.331873 5.4:+3110060 MS.gene058117:CDS
GATTAGGCCTGTTTGATCTA+AGG 0.332198 5.4:+3115526 MS.gene058117:CDS
AAGCTGTTTGATACCCTCTT+TGG 0.339347 5.4:+3114120 MS.gene058117:CDS
TTGATCTAAGGAATAGAAAA+TGG 0.343067 5.4:+3115538 MS.gene058117:CDS
GGCAAGGACTACACAAATTA+AGG 0.348662 5.4:+3111584 MS.gene058117:CDS
CAAATAGGCCATCTCCCTTA+AGG 0.359474 5.4:-3112325 None:intergenic
TACACAAATTAAGGCCAGTT+TGG 0.364326 5.4:+3111593 MS.gene058117:CDS
GACTAGGTCTGTTTGATCTA+AGG 0.364617 5.4:+3112270 MS.gene058117:CDS
TATGCTTAACAATATCATAT+TGG 0.366708 5.4:+3115288 MS.gene058117:CDS
AGCTTTCAAGTGGTTATTAT+GGG 0.369613 5.4:+3114084 MS.gene058117:CDS
ACAAGGAACTTGCGCCCTTA+AGG 0.369778 5.4:+3112310 MS.gene058117:CDS
CTGGTTGGCTTCAACTTTGA+AGG 0.374166 5.4:+3115614 MS.gene058117:CDS
AGATGGCCTATTTGAGGGCT+TGG 0.383361 5.4:+3112334 MS.gene058117:CDS
ATGATATTGTTAAGCATAGA+AGG 0.387835 5.4:-3115283 None:intergenic
AAAGCTTCCAAAGTGGTTAT+GGG 0.397541 5.4:+3110047 MS.gene058117:CDS
ATGATATTATTAAGCATAGT+AGG 0.401784 5.4:-3111933 None:intergenic
ACCAGTCTAAGCCCTCAAAA+AGG 0.403675 5.4:-3115596 None:intergenic
CAAGGAACTTGCGCCCTTAA+GGG 0.413585 5.4:+3112311 MS.gene058117:CDS
TATGCTTAATAATATCATAT+TGG 0.415062 5.4:+3111938 MS.gene058117:CDS
TTCTATTCCTTAGATCAAAC+AGG 0.417620 5.4:-3115533 None:intergenic
AAATAGGCCATCTCCCTTAA+GGG 0.422751 5.4:-3112324 None:intergenic
ACAAGGAACTTGTGCTCTAA+AGG 0.424299 5.4:+3115566 MS.gene058117:CDS
GCCTATTTGAGGGCTTGGAC+TGG 0.427793 5.4:+3112339 MS.gene058117:CDS
AGAGGGTATCAAACAGCTTC+CGG 0.431945 5.4:-3114116 None:intergenic
ACCAGTCCAAGCCCTCAAAT+AGG 0.436354 5.4:-3112340 None:intergenic
AAGGGAGATGGCCTATTTGA+GGG 0.442028 5.4:+3112329 MS.gene058117:CDS
GGAATCCATCGAGTGTGCTT+TGG 0.443809 5.4:+3109206 MS.gene058117:CDS
ATTGGTGTTTGCAAACAAAC+AGG 0.447495 5.4:+3111956 MS.gene058117:CDS
ATTGGTGTTTGCAAACAAAC+AGG 0.447495 5.4:+3115306 MS.gene058117:CDS
TAAGGGAGATGGCCTATTTG+AGG 0.450723 5.4:+3112328 MS.gene058117:CDS
ACGGAAGTATGTGAAGGATT+AGG 0.460545 5.4:+3115510 MS.gene058117:CDS
GTTTGGGATGTTGGAGGGCA+AGG 0.465234 5.4:+3114922 MS.gene058117:CDS
TGATCACAGGTTGTGATGGT+TGG 0.465757 5.4:+3110205 MS.gene058117:intron
TGATCACAGGTTGTGATGGT+TGG 0.465757 5.4:+3114227 MS.gene058117:intron
CAAGGAACTTGTGCTCTAAA+GGG 0.469282 5.4:+3115567 MS.gene058117:CDS
TCTTTGGAAACTCTGAGATA+CGG 0.475015 5.4:+3110099 MS.gene058117:CDS
ACACCAACAGTAGGAATAGT+AGG 0.476200 5.4:-3110286 None:intergenic
TCTTTGGCAACACTGAGATC+CGG 0.477419 5.4:+3114136 MS.gene058117:CDS
ACAAATTAAGGCCAGTTTGG+AGG 0.482462 5.4:+3111596 MS.gene058117:CDS
GAGAATAGATCAAGTAAAGC+AGG 0.487970 5.4:+3115149 MS.gene058117:CDS
CTTCTGATCACAGGTTGTGA+TGG 0.491214 5.4:+3110201 MS.gene058117:intron
CTTTGGCAACACTGAGATCC+GGG 0.499319 5.4:+3114137 MS.gene058117:CDS
TTTACGGTTTGGGATGTTGG+AGG 0.504090 5.4:+3114916 MS.gene058117:CDS
ATCCATCGAGTGTGCTTTGG+AGG 0.505043 5.4:+3109209 MS.gene058117:CDS
AGCTTGACCCATAACCACTT+TGG 0.505321 5.4:-3110054 None:intergenic
GAAAGGAGCGATGACGATAA+CGG 0.505948 5.4:+3115491 MS.gene058117:intron
GATTTATGTTGTTGATAGCA+TGG 0.508244 5.4:+3111760 MS.gene058117:intron
CTTTGGAAACTCTGAGATAC+GGG 0.510000 5.4:+3110100 MS.gene058117:CDS
ACGGGTTTATTGTATACTAC+AGG 0.519861 5.4:+3112494 MS.gene058117:CDS
GACACAATTTAAGACCACTT+TGG 0.521823 5.4:+3114947 MS.gene058117:CDS
TTACTTGATCTATTCTCTCA+CGG 0.522849 5.4:-3115143 None:intergenic
TCTTACCATACCATCAAAGT+TGG 0.528109 5.4:-3114983 None:intergenic
TGAAATTGAAAGCTTTCAAG+TGG 0.538549 5.4:+3114074 MS.gene058117:CDS
AATAGAAAGTGGCACATACA+AGG 0.539225 5.4:+3112293 MS.gene058117:CDS
GTACCTACTATTCCTACTGT+TGG 0.545945 5.4:+3110283 MS.gene058117:CDS
TTTACAGTTTGGGATCTTGG+AGG 0.546753 5.4:+3111562 MS.gene058117:CDS
GATCTATTCTCTCACGGTCA+TGG 0.555988 5.4:-3115137 None:intergenic
GTTTGGGATCTTGGAGGGCA+AGG 0.556403 5.4:+3111568 MS.gene058117:CDS
ATGGTTGGTCTTGACATGGC+TGG 0.566109 5.4:+3110220 MS.gene058117:CDS
TTACAGTTTGGGATCTTGGA+GGG 0.571495 5.4:+3111563 MS.gene058117:CDS
AATAGAAAATGGCACATACA+AGG 0.575931 5.4:+3115549 MS.gene058117:CDS
CTTCTGATCACAGGTTGTGA+TGG 0.576668 5.4:+3114223 MS.gene058117:intron
GTAAAATAGTTCTTCCAAAG+TGG 0.577261 5.4:-3114961 None:intergenic
ACTTGCGCCCTTAAGGGAGA+TGG 0.581060 5.4:+3112317 MS.gene058117:CDS
TTGATCTAAGGAATAGAAAG+TGG 0.583365 5.4:+3112282 MS.gene058117:CDS
GTATCTACTATTCCTACAGT+TGG 0.589390 5.4:+3114305 MS.gene058117:CDS
ATCCTCCAAAGCACACTCGA+TGG 0.590710 5.4:-3109211 None:intergenic
ACTTGTGCTCTAAAGGGAGA+TGG 0.591043 5.4:+3115573 MS.gene058117:CDS
TTACGGTTTGGGATGTTGGA+GGG 0.592263 5.4:+3114917 MS.gene058117:CDS
GAAATTGAAAGCTTCCAAAG+TGG 0.592717 5.4:+3110040 MS.gene058117:CDS
ACAGAAGTATGTGAAGGACT+AGG 0.598048 5.4:+3112254 MS.gene058117:CDS
ATGGTTGGTCTTGACAATGC+TGG 0.600517 5.4:+3114242 MS.gene058117:CDS
GCCCTTAAATGACTCTGACA+TGG 0.606408 5.4:+3109150 None:intergenic
GGATCTCAGTGTTGCCAAAG+AGG 0.610161 5.4:-3114134 None:intergenic
GATCTCAGTGTTGCCAAAGA+GGG 0.611688 5.4:-3114133 None:intergenic
TTATTAGACACACCAACAGT+AGG 0.615064 5.4:-3110295 None:intergenic
TGTGATGGTTGGTCTTGACA+TGG 0.617244 5.4:+3110216 MS.gene058117:CDS
TTATTAGACATACCAACTGT+AGG 0.619959 5.4:-3114317 None:intergenic
ACGATAACGGAAGTATGTGA+AGG 0.641532 5.4:+3115504 MS.gene058117:CDS
GTTTGCAAACAAACAGGACC+TGG 0.643314 5.4:+3111962 MS.gene058117:CDS
GTTTGCAAACAAACAGGACC+TGG 0.643314 5.4:+3115312 MS.gene058117:CDS
ACGCTAACAGAAGTATGTGA+AGG 0.656647 5.4:+3112248 MS.gene058117:CDS
TTGCATTGCAGGTTTCAATG+TGG 0.656697 5.4:+3111513 MS.gene058117:intron
AGTATGAAACTCGTGAACAA+CGG 0.679001 5.4:-3112452 None:intergenic
TTGCCTTGCAGGTTTCAACG+TGG 0.714297 5.4:+3114867 MS.gene058117:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTTAT+AGG + chr5.4:3112119-3112138 MS.gene058117:intron 0.0%
!! AAAAAAAATAAAATAAAAGG+GGG - chr5.4:3113604-3113623 None:intergenic 10.0%
!! ATTTCAAAAAGTAAAATAAA+AGG - chr5.4:3109582-3109601 None:intergenic 10.0%
!! CAAAAAAAATAAAATAAAAG+GGG - chr5.4:3113605-3113624 None:intergenic 10.0%
!! TATTCAAAATATTAAACATT+TGG - chr5.4:3113855-3113874 None:intergenic 10.0%
!! TCCATAATATATTTATTATT+AGG + chr5.4:3109865-3109884 MS.gene058117:intron 10.0%
!! TCCTAATAATAAATATATTA+TGG - chr5.4:3109869-3109888 None:intergenic 10.0%
!!! TAATATTTTGAATAATTCAA+TGG + chr5.4:3113861-3113880 MS.gene058117:intron 10.0%
!!! TATTTTTTAAAAACTTTCTT+TGG + chr5.4:3110342-3110361 MS.gene058117:intron 10.0%
!!! TTATATTAAATACTATGTTT+TGG + chr5.4:3112038-3112057 MS.gene058117:intron 10.0%
!! CTTAAATGAAAATAAATTAC+AGG + chr5.4:3112984-3113003 MS.gene058117:intron 15.0%
!! TATGCTTAATAATATCATAT+TGG + chr5.4:3111938-3111957 MS.gene058117:CDS 15.0%
!! TATTCAAAATATTACAAACT+TGG - chr5.4:3109821-3109840 None:intergenic 15.0%
!! TTCAAAATATATTCTGAATA+AGG + chr5.4:3112878-3112897 MS.gene058117:intron 15.0%
!!! AATACTATTTTGGAATTATT+TGG + chr5.4:3110997-3111016 MS.gene058117:intron 15.0%
!!! AGATAATACTAATACTATTT+TGG + chr5.4:3110987-3111006 MS.gene058117:intron 15.0%
!!! TAATATTTTGAATAAGTCAA+TGG + chr5.4:3109827-3109846 MS.gene058117:intron 15.0%
!!! TTCTTTTAAAATATTTGAGA+AGG - chr5.4:3112099-3112118 None:intergenic 15.0%
!! AAAGAAAATATATACAATGC+TGG + chr5.4:3111684-3111703 MS.gene058117:intron 20.0%
!! AGTAAAAGGAATTAAGAAAA+AGG + chr5.4:3109688-3109707 MS.gene058117:intron 20.0%
!! ATAATTGCACATATTAATGT+AGG - chr5.4:3111737-3111756 None:intergenic 20.0%
!! ATATTAATGTAGGTTAAAGA+AGG - chr5.4:3111727-3111746 None:intergenic 20.0%
!! ATGATATTATTAAGCATAGT+AGG - chr5.4:3111936-3111955 None:intergenic 20.0%
!! GAAATATAATCTTGTATGAA+AGG - chr5.4:3111290-3111309 None:intergenic 20.0%
!! GATGTCCATAATATATTATT+AGG + chr5.4:3113895-3113914 MS.gene058117:intron 20.0%
!! GGATAATGTACTTATTAAAA+TGG + chr5.4:3109451-3109470 MS.gene058117:intron 20.0%
!! GTGATCCTAATAATATATTA+TGG - chr5.4:3113903-3113922 None:intergenic 20.0%
!! GTTTAGTATTTACATAACAT+GGG - chr5.4:3112619-3112638 None:intergenic 20.0%
!! TAAGAAAATATTGACAATCA+TGG - chr5.4:3115461-3115480 None:intergenic 20.0%
!! TAATTAAGTTACTCAGTAAA+AGG + chr5.4:3109674-3109693 MS.gene058117:intron 20.0%
!! TATGCTTAACAATATCATAT+TGG + chr5.4:3115288-3115307 MS.gene058117:CDS 20.0%
!! TTCTAAATTCATTTCATCAA+GGG + chr5.4:3111440-3111459 MS.gene058117:intron 20.0%
!! TTTCTAAATTCATTTCATCA+AGG + chr5.4:3111439-3111458 MS.gene058117:intron 20.0%
!!! AAAAGAGTATATACTGATAT+AGG - chr5.4:3110744-3110763 None:intergenic 20.0%
!!! AAAGAGTATATACTGATATA+GGG - chr5.4:3110743-3110762 None:intergenic 20.0%
!!! AAAGGAAAATGTATTGATTT+AGG + chr5.4:3109508-3109527 MS.gene058117:intron 20.0%
!!! AAGGAAAATGTATTGATTTA+GGG + chr5.4:3109509-3109528 MS.gene058117:intron 20.0%
!!! AATTTAATAAGTCACTGATT+AGG - chr5.4:3112859-3112878 None:intergenic 20.0%
!!! ATTATTGAAAGTGTTTATGA+AGG + chr5.4:3114793-3114812 MS.gene058117:intron 20.0%
!!! ATTTTGAATAATTCAATGGT+TGG + chr5.4:3113865-3113884 MS.gene058117:intron 20.0%
!!! ATTTTGTGATCATAACAAAT+AGG + chr5.4:3110695-3110714 MS.gene058117:intron 20.0%
!!! CTTTTTCTTTGAAATTTGTT+TGG + chr5.4:3110154-3110173 MS.gene058117:intron 20.0%
!!! GTATAAGAATGTTGATTTTA+CGG + chr5.4:3111546-3111565 MS.gene058117:CDS 20.0%
!!! TGGAAGTGTTATTTTTAAAA+TGG + chr5.4:3110898-3110917 MS.gene058117:intron 20.0%
!!! TTATAAACTGAATTGATTCA+TGG + chr5.4:3115234-3115253 MS.gene058117:intron 20.0%
!!! TTATTGAAAGTGTTTATGAA+GGG + chr5.4:3114794-3114813 MS.gene058117:intron 20.0%
!!! TTTCTTATTCTTTTGTAGAA+AGG + chr5.4:3112218-3112237 MS.gene058117:intron 20.0%
!!! TTTTAAAATATTTGAGAAGG+TGG - chr5.4:3112096-3112115 None:intergenic 20.0%
! AAAAAACAATACCAACCAAT+GGG - chr5.4:3113976-3113995 None:intergenic 25.0%
! AATTACAGTAGAGACATATA+TGG + chr5.4:3110494-3110513 MS.gene058117:intron 25.0%
! AATTGTAGACTAATCATGAA+AGG - chr5.4:3113553-3113572 None:intergenic 25.0%
! ACTATATACTGATATAGGTA+GGG - chr5.4:3114574-3114593 None:intergenic 25.0%
! AGAAGGTGGAAATTATTATA+TGG - chr5.4:3112082-3112101 None:intergenic 25.0%
! AGACATTATTAATCACTTGA+AGG + chr5.4:3113467-3113486 MS.gene058117:intron 25.0%
! ATAAAAGGAGAAATAGAAAG+TGG - chr5.4:3109567-3109586 None:intergenic 25.0%
! ATACTCTATAAGCTTCAAAT+TGG + chr5.4:3114275-3114294 MS.gene058117:CDS 25.0%
! ATATCGGATTCATTTAAGAA+GGG - chr5.4:3113135-3113154 None:intergenic 25.0%
! ATGATATTGTTAAGCATAGA+AGG - chr5.4:3115286-3115305 None:intergenic 25.0%
! CAAAACTATTGAACTGAAAT+TGG + chr5.4:3113775-3113794 MS.gene058117:intron 25.0%
! CACAGAAATAACAAATGTAA+CGG - chr5.4:3110396-3110415 None:intergenic 25.0%
! CTAAACTATTGAACTGAAAT+TGG + chr5.4:3109737-3109756 MS.gene058117:intron 25.0%
! GAAAGACTATATACTGATAT+AGG - chr5.4:3114579-3114598 None:intergenic 25.0%
! GAAGAAATCAATAAAGTAAG+AGG + chr5.4:3109906-3109925 MS.gene058117:intron 25.0%
! GATACATTATCAATGTCTAT+CGG - chr5.4:3110550-3110569 None:intergenic 25.0%
! GGTTTAGTATTTACATAACA+TGG - chr5.4:3112620-3112639 None:intergenic 25.0%
! GTGACAATTATGTCTTAAAT+TGG + chr5.4:3110843-3110862 MS.gene058117:intron 25.0%
! TACGCACGTAATATTATAAT+TGG - chr5.4:3112948-3112967 None:intergenic 25.0%
! TTAGAAAGTTCCAAAAAAGT+CGG - chr5.4:3111426-3111445 None:intergenic 25.0%
! TTCAAACCTTAACAATTAGA+AGG - chr5.4:3112423-3112442 None:intergenic 25.0%
! TTCAAAGAGAAAATAGTTGA+TGG - chr5.4:3114169-3114188 None:intergenic 25.0%
! TTCAAGTGATTAATAATGTC+TGG - chr5.4:3113468-3113487 None:intergenic 25.0%
! TTCTTAAATGAATCCGATAT+GGG + chr5.4:3113135-3113154 MS.gene058117:intron 25.0%
! TTGACAATTATAAACTGAAC+TGG + chr5.4:3111877-3111896 MS.gene058117:intron 25.0%
! TTGATCTAAGGAATAGAAAA+TGG + chr5.4:3115538-3115557 MS.gene058117:CDS 25.0%
! TTTATATGTGTGTGTATTAC+TGG + chr5.4:3115208-3115227 MS.gene058117:intron 25.0%
!! AACTATTTTACCAACTTTGA+TGG + chr5.4:3114973-3114992 MS.gene058117:CDS 25.0%
!! AAGAGTATATACTGATATAG+GGG - chr5.4:3110742-3110761 None:intergenic 25.0%
!! AAGTTAGAATTTTGTGTATC+TGG + chr5.4:3112674-3112693 MS.gene058117:intron 25.0%
!! ATTGTATACTACAGGTATTT+TGG + chr5.4:3112502-3112521 MS.gene058117:intron 25.0%
!! ATTTTGAATAAGTCAATGGT+TGG + chr5.4:3109831-3109850 MS.gene058117:intron 25.0%
!! GAATGATGCTAAATTTTCTA+AGG + chr5.4:3113255-3113274 MS.gene058117:intron 25.0%
!! GTGTATCTGGAATAAAATAT+GGG + chr5.4:3112687-3112706 MS.gene058117:intron 25.0%
!! TCATTATTTTCATGACATCA+CGG + chr5.4:3112475-3112494 MS.gene058117:CDS 25.0%
!! TGTGTATCTGGAATAAAATA+TGG + chr5.4:3112686-3112705 MS.gene058117:intron 25.0%
!!! AGAATGTTGATTTTACAGTT+TGG + chr5.4:3111551-3111570 MS.gene058117:CDS 25.0%
!!! AGGAAAATGTATTGATTTAG+GGG + chr5.4:3109510-3109529 MS.gene058117:intron 25.0%
!!! AGTTATTTTCATGTAGCAAA+AGG + chr5.4:3113703-3113722 MS.gene058117:intron 25.0%
!!! ATCTAAGATGTATTGTTTTC+CGG + chr5.4:3110820-3110839 MS.gene058117:intron 25.0%
!!! ATTTTTGCTAGATCTAAAGT+TGG + chr5.4:3111178-3111197 MS.gene058117:intron 25.0%
!!! CACTTTTTTAACAACATTGA+TGG + chr5.4:3111619-3111638 MS.gene058117:CDS 25.0%
!!! GAATGTTGATTTTACAGTTT+GGG + chr5.4:3111552-3111571 MS.gene058117:CDS 25.0%
!!! GTCTATATGTTTTTTCTGTA+GGG + chr5.4:3111477-3111496 MS.gene058117:intron 25.0%
!!! TACATTTGTTATTTCTGTGT+TGG + chr5.4:3110397-3110416 MS.gene058117:intron 25.0%
!!! TATTTGATGCTGTACTTTTT+AGG + chr5.4:3110932-3110951 MS.gene058117:intron 25.0%
!!! TTTAGCAAATTTTAGTCAGT+TGG + chr5.4:3113657-3113676 MS.gene058117:intron 25.0%
!!! TTTTAACAACATTGATGGTT+TGG + chr5.4:3111624-3111643 MS.gene058117:CDS 25.0%
AAAATCATCGCACTAAAAAG+TGG + chr5.4:3109185-3109204 MS.gene058117:CDS 30.0%
AACAATTTACTTTGCATTGC+AGG + chr5.4:3111502-3111521 MS.gene058117:intron 30.0%
AATAGAAAATGGCACATACA+AGG + chr5.4:3115549-3115568 MS.gene058117:CDS 30.0%
ACATCTTAGATACATCTTAC+AGG - chr5.4:3110811-3110830 None:intergenic 30.0%
ACATTACTCTTGAATGAAAC+TGG - chr5.4:3112569-3112588 None:intergenic 30.0%
ACTTGAATAGTATGTTTGTG+TGG + chr5.4:3113314-3113333 MS.gene058117:intron 30.0%
AGACATAAAAGCAAGGAAAT+TGG - chr5.4:3115010-3115029 None:intergenic 30.0%
AGACGTTATCAATCACTAAA+AGG + chr5.4:3109490-3109509 MS.gene058117:intron 30.0%
AGCAAAACTCAAATTGTTTG+AGG - chr5.4:3112166-3112185 None:intergenic 30.0%
AGCTTTCAATTTCAATTCTC+TGG - chr5.4:3110033-3110052 None:intergenic 30.0%
AGGAAACTATGAGAGAAAAT+TGG + chr5.4:3112737-3112756 MS.gene058117:intron 30.0%
ATAAAAGGGGGAATAGAAAA+TGG - chr5.4:3113592-3113611 None:intergenic 30.0%
ATACTCTATAAGCTCCAAAT+TGG + chr5.4:3110253-3110272 MS.gene058117:CDS 30.0%
ATTCATACCAATACAAAGCA+AGG - chr5.4:3111063-3111082 None:intergenic 30.0%
CAAAAAACAATACCAACCAA+TGG - chr5.4:3113977-3113996 None:intergenic 30.0%
CAAAGCAAAACTCAATATGA+GGG - chr5.4:3115425-3115444 None:intergenic 30.0%
CATATCGGATTCATTTAAGA+AGG - chr5.4:3113136-3113155 None:intergenic 30.0%
CTATATACTGATATAGGTAG+GGG - chr5.4:3114573-3114592 None:intergenic 30.0%
CTTCTTAAATGAATCCGATA+TGG + chr5.4:3113134-3113153 MS.gene058117:intron 30.0%
GAAATTATTGACAGTGCTTA+TGG + chr5.4:3111366-3111385 MS.gene058117:intron 30.0%
GACTATATACTGATATAGGT+AGG - chr5.4:3114575-3114594 None:intergenic 30.0%
GATAGATATAGATTGAAGTG+TGG - chr5.4:3114014-3114033 None:intergenic 30.0%
GATTTCTTCCTTCTTAAGAA+TGG - chr5.4:3109895-3109914 None:intergenic 30.0%
GGAATTAAGAAAAAGGAAGA+AGG + chr5.4:3109695-3109714 MS.gene058117:intron 30.0%
GGACAATGTAATGATTGAAA+TGG + chr5.4:3113428-3113447 MS.gene058117:intron 30.0%
GTAAAATAGTTCTTCCAAAG+TGG - chr5.4:3114964-3114983 None:intergenic 30.0%
TAAGTACATTATCCAACTCA+TGG - chr5.4:3109445-3109464 None:intergenic 30.0%
TCAAAGCAAAACTCAATATG+AGG - chr5.4:3115426-3115445 None:intergenic 30.0%
TCAAGAGTAATGTAGATTGT+AGG + chr5.4:3112576-3112595 MS.gene058117:intron 30.0%
TGAAATTGAAAGCTTTCAAG+TGG + chr5.4:3114074-3114093 MS.gene058117:CDS 30.0%
TGAGAAATTATGGGATAACA+AGG + chr5.4:3113066-3113085 MS.gene058117:intron 30.0%
TTACTTGATCTATTCTCTCA+CGG - chr5.4:3115146-3115165 None:intergenic 30.0%
TTATTAGACATACCAACTGT+AGG - chr5.4:3114320-3114339 None:intergenic 30.0%
TTCATACCAATACAAAGCAA+GGG - chr5.4:3111062-3111081 None:intergenic 30.0%
TTCTATTCCTTAGATCAAAC+AGG - chr5.4:3112280-3112299 None:intergenic 30.0%
TTCTTTCTACTGCATACAAT+TGG + chr5.4:3115365-3115384 MS.gene058117:intron 30.0%
TTGATCTAAGGAATAGAAAG+TGG + chr5.4:3112282-3112301 MS.gene058117:CDS 30.0%
! AAGCACTGTCAATAATTTCT+TGG - chr5.4:3111365-3111384 None:intergenic 30.0%
! AAGCTTTCAAGTGGTTATTA+TGG + chr5.4:3114083-3114102 MS.gene058117:CDS 30.0%
! AGCTTTCAAGTGGTTATTAT+GGG + chr5.4:3114084-3114103 MS.gene058117:CDS 30.0%
! CATTATTTTCATGACATCAC+GGG + chr5.4:3112476-3112495 MS.gene058117:CDS 30.0%
! TAGGTACAACTTTTCCAATT+TGG - chr5.4:3110270-3110289 None:intergenic 30.0%
! TCATATTGAGTTTTGCTTTG+AGG + chr5.4:3115425-3115444 MS.gene058117:intron 30.0%
! TTTAAGACATAATTGTCACC+CGG - chr5.4:3110842-3110861 None:intergenic 30.0%
! TTTTCAGATGATACGTTCAT+CGG - chr5.4:3112791-3112810 None:intergenic 30.0%
!! AATGAAGTAGTTTGCTATTG+TGG + chr5.4:3109599-3109618 MS.gene058117:intron 30.0%
!! CATTGATAATGTATCTAGAG+AGG + chr5.4:3110555-3110574 MS.gene058117:intron 30.0%
!! GATTTATGTTGTTGATAGCA+TGG + chr5.4:3111760-3111779 MS.gene058117:intron 30.0%
!! GCTAAATTTTCTAAGGAACA+TGG + chr5.4:3113262-3113281 MS.gene058117:intron 30.0%
!! TCTAAGATGTATTGTTTTCC+GGG + chr5.4:3110821-3110840 MS.gene058117:intron 30.0%
!! TTGCTTTTATGTCTCTTTCT+CGG + chr5.4:3115016-3115035 MS.gene058117:intron 30.0%
!! TTTTACCAACTTTGATGGTA+TGG + chr5.4:3114978-3114997 MS.gene058117:CDS 30.0%
!!! AACAATTTATTTTGCCTTGC+AGG + chr5.4:3114856-3114875 MS.gene058117:intron 30.0%
!!! AATGAAGTAGTTTGCTTTTG+TGG + chr5.4:3113626-3113645 MS.gene058117:intron 30.0%
!!! AGAATGTTGATTTTACGGTT+TGG + chr5.4:3114905-3114924 MS.gene058117:CDS 30.0%
!!! GAATGTTGATTTTACGGTTT+GGG + chr5.4:3114906-3114925 MS.gene058117:CDS 30.0%
!!! GGTCTATATGTTTTTTCTGT+AGG + chr5.4:3111476-3111495 MS.gene058117:intron 30.0%
AAAAGCCAAGTAGATAACTG+AGG - chr5.4:3111034-3111053 None:intergenic 35.0%
AAAGCTTCCAAAGTGGTTAT+GGG + chr5.4:3110047-3110066 MS.gene058117:CDS 35.0%
AAAGTTCCAAAAAAGTCGGT+TGG - chr5.4:3111422-3111441 None:intergenic 35.0%
AATAGAAAGTGGCACATACA+AGG + chr5.4:3112293-3112312 MS.gene058117:CDS 35.0%
ACGGGTTTATTGTATACTAC+AGG + chr5.4:3112494-3112513 MS.gene058117:CDS 35.0%
AGATAACTGAGGAGCTATTA+AGG - chr5.4:3111023-3111042 None:intergenic 35.0%
AGTATATACTGATATAGGGG+CGG - chr5.4:3110739-3110758 None:intergenic 35.0%
AGTATGAAACTCGTGAACAA+CGG - chr5.4:3112455-3112474 None:intergenic 35.0%
ATAATGTATCTAGAGAGGAG+GGG + chr5.4:3110560-3110579 MS.gene058117:intron 35.0%
ATACTAACGTAAGTGAAGGA+AGG - chr5.4:3115086-3115105 None:intergenic 35.0%
ATATGAGGGACTAAAATGGT+AGG - chr5.4:3115411-3115430 None:intergenic 35.0%
ATCAAGGGTTTCTTTGACAA+GGG + chr5.4:3111455-3111474 MS.gene058117:intron 35.0%
ATGTTCATTTGAGTCTGGAA+TGG + chr5.4:3109322-3109341 MS.gene058117:intron 35.0%
CAACTCTCATAACAGGAAAA+TGG - chr5.4:3112714-3112733 None:intergenic 35.0%
CCTCATCCTTCTAATTGTTA+AGG + chr5.4:3112414-3112433 MS.gene058117:intron 35.0%
CCTTAACAATTAGAAGGATG+AGG - chr5.4:3112417-3112436 None:intergenic 35.0%
CTAAGCTACCAATTCTCATT+GGG + chr5.4:3109929-3109948 MS.gene058117:intron 35.0%
CTCAATATGAGGGACTAAAA+TGG - chr5.4:3115415-3115434 None:intergenic 35.0%
CTGTATCGTACTGTTTATCT+CGG - chr5.4:3114439-3114458 None:intergenic 35.0%
GAAATTGAAAGCTTCCAAAG+TGG + chr5.4:3110040-3110059 MS.gene058117:CDS 35.0%
GAGAAAGAGACATAAAAGCA+AGG - chr5.4:3115017-3115036 None:intergenic 35.0%
GAGAATAGATCAAGTAAAGC+AGG + chr5.4:3115149-3115168 MS.gene058117:CDS 35.0%
GATAATGTATCTAGAGAGGA+GGG + chr5.4:3110559-3110578 MS.gene058117:intron 35.0%
GGTGATTATTGGTCATAACA+TGG - chr5.4:3111401-3111420 None:intergenic 35.0%
GTATCTACTATTCCTACAGT+TGG + chr5.4:3114305-3114324 MS.gene058117:CDS 35.0%
TACACAAATTAAGGCCAGTT+TGG + chr5.4:3111593-3111612 MS.gene058117:CDS 35.0%
TAGGATCACCATTCTTAAGA+AGG + chr5.4:3109884-3109903 MS.gene058117:intron 35.0%
TATGAGGGACTAAAATGGTA+GGG - chr5.4:3115410-3115429 None:intergenic 35.0%
TATGCATGTTCATTTGAGTC+TGG + chr5.4:3109317-3109336 MS.gene058117:intron 35.0%
TATTGCACACAATCTAACAC+AGG + chr5.4:3113522-3113541 MS.gene058117:intron 35.0%
TCAACTTGGCATGTTTAGTT+TGG - chr5.4:3109781-3109800 None:intergenic 35.0%
TCAAGTAAAGCAGGAATTTC+AGG + chr5.4:3115158-3115177 MS.gene058117:CDS 35.0%
TCATACCAATACAAAGCAAG+GGG - chr5.4:3111061-3111080 None:intergenic 35.0%
TCATTACATTGTCCAACTCA+TGG - chr5.4:3113422-3113441 None:intergenic 35.0%
TCTTACCATACCATCAAAGT+TGG - chr5.4:3114986-3115005 None:intergenic 35.0%
TCTTCCAACAGTTGAATTTG+AGG + chr5.4:3109382-3109401 MS.gene058117:intron 35.0%
TCTTGGCAGAAATATCAAAG+AGG - chr5.4:3111348-3111367 None:intergenic 35.0%
TTATTAGACACACCAACAGT+AGG - chr5.4:3110298-3110317 None:intergenic 35.0%
TTATTATGGGTCAAGCTTTC+CGG + chr5.4:3114097-3114116 MS.gene058117:CDS 35.0%
TTATTGACAGTGCTTATGGT+AGG + chr5.4:3111370-3111389 MS.gene058117:intron 35.0%
TTGCAATTGACAACCCATAT+CGG - chr5.4:3113151-3113170 None:intergenic 35.0%
TTTGCATCCATTTCATGTGT+TGG + chr5.4:3114361-3114380 MS.gene058117:intron 35.0%
! ATTGGTGTTTGCAAACAAAC+AGG + chr5.4:3111956-3111975 MS.gene058117:CDS 35.0%
! CAATTGGTTAAGAAGAGTGT+AGG + chr5.4:3115381-3115400 MS.gene058117:intron 35.0%
! GAAGTGTCAAAGATGTATCT+GGG + chr5.4:3110869-3110888 MS.gene058117:intron 35.0%
! GACACAATTTAAGACCACTT+TGG + chr5.4:3114947-3114966 MS.gene058117:CDS 35.0%
! GCTTTGTATTGGTATGAATG+AGG + chr5.4:3111064-3111083 MS.gene058117:intron 35.0%
! TATTGAACTGAAATTGGCTC+TGG + chr5.4:3109743-3109762 MS.gene058117:intron 35.0%
! TGATAATGTATCTAGAGAGG+AGG + chr5.4:3110558-3110577 MS.gene058117:intron 35.0%
!! AAAAGTCGGTTGGTGATTAT+TGG - chr5.4:3111412-3111431 None:intergenic 35.0%
!! AATAGTTGATGGTTGATACC+CGG - chr5.4:3114158-3114177 None:intergenic 35.0%
!! ACACTTAAGAGTGTCTATCA+GGG - chr5.4:3109250-3109269 None:intergenic 35.0%
!! AGAAGTGTCAAAGATGTATC+TGG + chr5.4:3110868-3110887 MS.gene058117:intron 35.0%
!! GATTTTACAGTTTGGGATCT+TGG + chr5.4:3111559-3111578 MS.gene058117:CDS 35.0%
!! GGTCTATATGTTGTTTCGTT+AGG + chr5.4:3114830-3114849 MS.gene058117:intron 35.0%
!! TACACTTAAGAGTGTCTATC+AGG - chr5.4:3109251-3109270 None:intergenic 35.0%
!! TCTTTGGAAACTCTGAGATA+CGG + chr5.4:3110099-3110118 MS.gene058117:CDS 35.0%
!! TGCTTATTTGTTATGCTCAC+AGG - chr5.4:3114535-3114554 None:intergenic 35.0%
!! TTAAAAAAGTGCCTCCAAAC+TGG - chr5.4:3111610-3111629 None:intergenic 35.0%
!!! AGTTGCTTTTGAAGATCAGT+AGG + chr5.4:3113201-3113220 MS.gene058117:intron 35.0%
!!! TAATCACCAACCGACTTTTT+TGG + chr5.4:3111413-3111432 MS.gene058117:intron 35.0%
!!! TGATGCTGTACTTTTTAGGT+AGG + chr5.4:3110936-3110955 MS.gene058117:intron 35.0%
AAAATCACTGCACTGGAAAG+TGG + chr5.4:3113169-3113188 MS.gene058117:intron 40.0%
AAAGCCTCACATTCAACTGT+TGG - chr5.4:3113366-3113385 None:intergenic 40.0%
AAATAGGCCATCTCCCTTAA+GGG - chr5.4:3112327-3112346 None:intergenic 40.0%
AAGATGTATCTGGGCAGTAT+TGG + chr5.4:3110878-3110897 MS.gene058117:intron 40.0%
AAGCATAGAAGGCTCGTTTA+TGG - chr5.4:3115275-3115294 None:intergenic 40.0%
AAGCTGTTCGACACATTCTT+TGG + chr5.4:3110083-3110102 MS.gene058117:CDS 40.0%
AAGCTGTTTGATACCCTCTT+TGG + chr5.4:3114120-3114139 MS.gene058117:CDS 40.0%
ACAAATTAAGGCCAGTTTGG+AGG + chr5.4:3111596-3111615 MS.gene058117:CDS 40.0%
ACAAGGAACTTGTGCTCTAA+AGG + chr5.4:3115566-3115585 MS.gene058117:CDS 40.0%
ACACCAACAGTAGGAATAGT+AGG - chr5.4:3110289-3110308 None:intergenic 40.0%
ACATTATCCAACTCATGGTC+TGG - chr5.4:3109440-3109459 None:intergenic 40.0%
AGAAGTAACAAAGACTTGCC+AGG - chr5.4:3111983-3112002 None:intergenic 40.0%
AGTAAAGCAGGAATTTCAGG+TGG + chr5.4:3115161-3115180 MS.gene058117:intron 40.0%
AGTTGAATGAGAAAACGTGG+AGG + chr5.4:3109651-3109670 MS.gene058117:intron 40.0%
ATGAATTCCAGACCATGAGT+TGG + chr5.4:3109430-3109449 MS.gene058117:intron 40.0%
ATGATACGTTCATCGGATAG+AGG - chr5.4:3112784-3112803 None:intergenic 40.0%
ATGTTCGTCGTCAATGACAT+GGG - chr5.4:3112535-3112554 None:intergenic 40.0%
CAAACAGTGCTACAACAAGT+TGG - chr5.4:3111324-3111343 None:intergenic 40.0%
CAACCATACCCAATGAGAAT+TGG - chr5.4:3109940-3109959 None:intergenic 40.0%
CAAGCCTCAAATTCAACTGT+TGG - chr5.4:3109389-3109408 None:intergenic 40.0%
CAATTGCAAAATCACTGCAC+TGG + chr5.4:3113162-3113181 MS.gene058117:intron 40.0%
CAGTAGGTTTCTTCCTTGAT+AGG + chr5.4:3113217-3113236 MS.gene058117:intron 40.0%
CATATAGACCCATGTCAAGT+AGG - chr5.4:3114820-3114839 None:intergenic 40.0%
CATCAAGGGTTTCTTTGACA+AGG + chr5.4:3111454-3111473 MS.gene058117:intron 40.0%
CCCATAATTTCTCATTCCTC+CGG - chr5.4:3113060-3113079 None:intergenic 40.0%
CCGGAGGAATGAGAAATTAT+GGG + chr5.4:3113057-3113076 MS.gene058117:intron 40.0%
CGAGTCATATGACAACTCTT+TGG + chr5.4:3113032-3113051 MS.gene058117:intron 40.0%
CTACCAATTCTCATTGGGTA+TGG + chr5.4:3109934-3109953 MS.gene058117:intron 40.0%
CTGATATTTCCTTCTCAGCT+AGG + chr5.4:3114410-3114429 MS.gene058117:intron 40.0%
GAAAGCTTCCAAAGTGGTTA+TGG + chr5.4:3110046-3110065 MS.gene058117:CDS 40.0%
GACAGTTGAATGAGAAAACG+TGG + chr5.4:3109648-3109667 MS.gene058117:intron 40.0%
GACTAGGTCTGTTTGATCTA+AGG + chr5.4:3112270-3112289 MS.gene058117:CDS 40.0%
GATCACGATTGAACATGTTG+TGG - chr5.4:3112641-3112660 None:intergenic 40.0%
GATCTTCAAAAGCAACTCGA+TGG - chr5.4:3113198-3113217 None:intergenic 40.0%
GATTAGGCCTGTTTGATCTA+AGG + chr5.4:3115526-3115545 MS.gene058117:CDS 40.0%
GCACATACTAACGTAAGTGA+AGG - chr5.4:3115090-3115109 None:intergenic 40.0%
GCTAAGCTACCAATTCTCAT+TGG + chr5.4:3109928-3109947 MS.gene058117:intron 40.0%
GGATTCATTTAAGAAGGGCA+CGG - chr5.4:3113130-3113149 None:intergenic 40.0%
GGCAAGGACTACACAAATTA+AGG + chr5.4:3111584-3111603 MS.gene058117:CDS 40.0%
GTACCTACTATTCCTACTGT+TGG + chr5.4:3110283-3110302 MS.gene058117:CDS 40.0%
GTATATACTGATATAGGGGC+GGG - chr5.4:3110738-3110757 None:intergenic 40.0%
GTGATGTGATATATCCTCCT+CGG + chr5.4:3110441-3110460 MS.gene058117:intron 40.0%
GTTAAGCAGACTAGCATACA+TGG + chr5.4:3111086-3111105 MS.gene058117:intron 40.0%
TAAAATGGCGTACAAAGTGC+TGG + chr5.4:3109466-3109485 MS.gene058117:intron 40.0%
TAATGTATCTAGAGAGGAGG+GGG + chr5.4:3110561-3110580 MS.gene058117:intron 40.0%
TAGCTCCTCAGTTATCTACT+TGG + chr5.4:3111026-3111045 MS.gene058117:intron 40.0%
TCAACTGTTGGAAGATGATG+AGG - chr5.4:3109377-3109396 None:intergenic 40.0%
TCAAGCAAAGCACGAATTTC+AGG + chr5.4:3111799-3111818 MS.gene058117:CDS 40.0%
TCCTGTTATGAGAGTTGTGA+AGG + chr5.4:3112717-3112736 MS.gene058117:intron 40.0%
TCCTTCACAACTCTCATAAC+AGG - chr5.4:3112721-3112740 None:intergenic 40.0%
TCTTCCAACAGTTGAATGTG+AGG + chr5.4:3113359-3113378 MS.gene058117:intron 40.0%
TGAGCTACCAACACATGAAA+TGG - chr5.4:3114371-3114390 None:intergenic 40.0%
TGAGGCTTGTACCTTAATCT+CGG + chr5.4:3109400-3109419 MS.gene058117:intron 40.0%
TGGTTATGGGTCAAGCTTTA+CGG + chr5.4:3110060-3110079 MS.gene058117:CDS 40.0%
TGTATCGTACCACTGTATAC+CGG - chr5.4:3110475-3110494 None:intergenic 40.0%
TTCTTCCCCTTGCTTTGTAT+TGG + chr5.4:3111053-3111072 MS.gene058117:intron 40.0%
TTGCATTGCAGGTTTCAATG+TGG + chr5.4:3111513-3111532 MS.gene058117:intron 40.0%
TTGGATTCTAGACCATGAGT+TGG + chr5.4:3113407-3113426 MS.gene058117:intron 40.0%
! ACAGAAGTATGTGAAGGACT+AGG + chr5.4:3112254-3112273 MS.gene058117:CDS 40.0%
! ACGCTAACAGAAGTATGTGA+AGG + chr5.4:3112248-3112267 MS.gene058117:CDS 40.0%
! ACGGAAGTATGTGAAGGATT+AGG + chr5.4:3115510-3115529 MS.gene058117:CDS 40.0%
! AGTCTGGAATGGTATGTTTG+TGG + chr5.4:3109333-3109352 MS.gene058117:intron 40.0%
! ATATGACAACTCTTTGGTGC+CGG + chr5.4:3113038-3113057 MS.gene058117:intron 40.0%
! ATCAACGAAAGTGCACAAAC+TGG - chr5.4:3114759-3114778 None:intergenic 40.0%
! CAAGGAACTTGTGCTCTAAA+GGG + chr5.4:3115567-3115586 MS.gene058117:CDS 40.0%
! CTAAACATGCCAAGTTGACT+TGG + chr5.4:3109783-3109802 MS.gene058117:intron 40.0%
! GTCTGGAATGGTATGTTTGT+GGG + chr5.4:3109334-3109353 MS.gene058117:intron 40.0%
! TTACAGTTTGGGATCTTGGA+GGG + chr5.4:3111563-3111582 MS.gene058117:CDS 40.0%
! TTTACAGTTTGGGATCTTGG+AGG + chr5.4:3111562-3111581 MS.gene058117:CDS 40.0%
!! ACACTTAAGAGTGCCTATCA+AGG - chr5.4:3113233-3113252 None:intergenic 40.0%
!! ACGATAACGGAAGTATGTGA+AGG + chr5.4:3115504-3115523 MS.gene058117:CDS 40.0%
!! ATTTCTGTGTTGGTAGCTCA+AGG + chr5.4:3110407-3110426 MS.gene058117:intron 40.0%
!! CTTTGGAAACTCTGAGATAC+GGG + chr5.4:3110100-3110119 MS.gene058117:CDS 40.0%
!! GATTTTACGGTTTGGGATGT+TGG + chr5.4:3114913-3114932 MS.gene058117:CDS 40.0%
!! GCGGATCTTTAGAATAAGCA+AGG - chr5.4:3114204-3114223 None:intergenic 40.0%
!! TTAAGAGTGTCTATCAGGGA+AGG - chr5.4:3109246-3109265 None:intergenic 40.0%
!! TTTCATGTGTTGGTAGCTCA+AGG + chr5.4:3114371-3114390 MS.gene058117:intron 40.0%
AAAGATCCGCTTCTGATCAC+AGG + chr5.4:3114214-3114233 MS.gene058117:intron 45.0%
AAGGGAGATGGCCTATTTGA+GGG + chr5.4:3112329-3112348 MS.gene058117:CDS 45.0%
AATGTATCTAGAGAGGAGGG+GGG + chr5.4:3110562-3110581 MS.gene058117:intron 45.0%
ACCAGTCTAAGCCCTCAAAA+AGG - chr5.4:3115599-3115618 None:intergenic 45.0%
ACTGTTGGAAGATGATGAGG+AGG - chr5.4:3109374-3109393 None:intergenic 45.0%
AGCAAAGCACGAATTTCAGG+TGG + chr5.4:3111802-3111821 MS.gene058117:intron 45.0%
AGCTACAAGTTCCCATTGGT+TGG + chr5.4:3113962-3113981 MS.gene058117:intron 45.0%
AGCTTGACCCATAACCACTT+TGG - chr5.4:3110057-3110076 None:intergenic 45.0%
AGTTGGATGAGAAAACGTCG+AGG + chr5.4:3113674-3113693 MS.gene058117:intron 45.0%
ATGAAGGGCCTACTTGACAT+GGG + chr5.4:3114809-3114828 MS.gene058117:intron 45.0%
CAAATAGGCCATCTCCCTTA+AGG - chr5.4:3112328-3112347 None:intergenic 45.0%
CACATGTCTTTACACAGCCA+AGG - chr5.4:3111114-3111133 None:intergenic 45.0%
CACTTCAATCTCTCTCTGTC+TGG + chr5.4:3109981-3110000 MS.gene058117:intron 45.0%
CATGTTCGTCGTCAATGACA+TGG - chr5.4:3112536-3112555 None:intergenic 45.0%
CCAAGTCAACATGGCATGTT+TGG - chr5.4:3113820-3113839 None:intergenic 45.0%
CCAATAGAACACCGAGAGTA+AGG - chr5.4:3113391-3113410 None:intergenic 45.0%
CTTCTGATCACAGGTTGTGA+TGG + chr5.4:3110201-3110220 MS.gene058117:intron 45.0%
GAAAGGAGCGATGACGATAA+CGG + chr5.4:3115491-3115510 MS.gene058117:intron 45.0%
GACTAGCATACATGGTTCCT+TGG + chr5.4:3111094-3111113 MS.gene058117:intron 45.0%
GATCTATTCTCTCACGGTCA+TGG - chr5.4:3115140-3115159 None:intergenic 45.0%
GATCTCAGTGTTGCCAAAGA+GGG - chr5.4:3114136-3114155 None:intergenic 45.0%
GCCGGAGGAATGAGAAATTA+TGG + chr5.4:3113056-3113075 MS.gene058117:intron 45.0%
GCTAAGCTACAAGTTCCCAT+TGG + chr5.4:3113958-3113977 MS.gene058117:intron 45.0%
GTATCGTACCACTGTATACC+GGG - chr5.4:3110474-3110493 None:intergenic 45.0%
GTTAAGAACCCGGTATACAG+TGG + chr5.4:3110463-3110482 MS.gene058117:intron 45.0%
GTTTGCAAACAAACAGGACC+TGG + chr5.4:3111962-3111981 MS.gene058117:CDS 45.0%
TAAGGGAGATGGCCTATTTG+AGG + chr5.4:3112328-3112347 MS.gene058117:CDS 45.0%
TATGAAGGGCCTACTTGACA+TGG + chr5.4:3114808-3114827 MS.gene058117:intron 45.0%
TCACAACCTGTGATCAGAAG+CGG - chr5.4:3110201-3110220 None:intergenic 45.0%
TCGTCAATGACATGGGTGAT+GGG - chr5.4:3112528-3112547 None:intergenic 45.0%
TCTTTGGCAACACTGAGATC+CGG + chr5.4:3114136-3114155 MS.gene058117:CDS 45.0%
TGATCACAGGTTGTGATGGT+TGG + chr5.4:3110205-3110224 MS.gene058117:intron 45.0%
! AAAGGGAGATGGCCTTTTTG+AGG + chr5.4:3115584-3115603 MS.gene058117:CDS 45.0%
! AAGGGAGATGGCCTTTTTGA+GGG + chr5.4:3115585-3115604 MS.gene058117:CDS 45.0%
! CCAAACATGCCATGTTGACT+TGG + chr5.4:3113817-3113836 MS.gene058117:intron 45.0%
! TGAGGCTTTTGCCTTACTCT+CGG + chr5.4:3113377-3113396 MS.gene058117:intron 45.0%
! TTACGGTTTGGGATGTTGGA+GGG + chr5.4:3114917-3114936 MS.gene058117:CDS 45.0%
! TTTACGGTTTGGGATGTTGG+AGG + chr5.4:3114916-3114935 MS.gene058117:CDS 45.0%
!! ACTTGTGCTCTAAAGGGAGA+TGG + chr5.4:3115573-3115592 MS.gene058117:CDS 45.0%
!! AGAGGGTATCAAACAGCTTC+CGG - chr5.4:3114119-3114138 None:intergenic 45.0%
!! ATGGTTGGTCTTGACAATGC+TGG + chr5.4:3114242-3114261 MS.gene058117:CDS 45.0%
!! CCTTACTCTCGGTGTTCTAT+TGG + chr5.4:3113388-3113407 MS.gene058117:intron 45.0%
!! CTGGTTGGCTTCAACTTTGA+AGG + chr5.4:3115614-3115633 MS.gene058117:CDS 45.0%
!! TCATTAGAGCGCCGAGATTA+AGG - chr5.4:3109414-3109433 None:intergenic 45.0%
!! TGTGATGGTTGGTCTTGACA+TGG + chr5.4:3110216-3110235 MS.gene058117:CDS 45.0%
!! TTTTGAGGGCTTAGACTGGT+TGG + chr5.4:3115599-3115618 MS.gene058117:CDS 45.0%
!! TCAAAAAAAATAAAATAAAA+GGG - chr5.4:3113606-3113625 None:intergenic 5.0%
!! TTCAAAAAAAATAAAATAAA+AGG - chr5.4:3113607-3113626 None:intergenic 5.0%
!!! AAGTTTTTAAAAAATAAAAT+TGG - chr5.4:3110338-3110357 None:intergenic 5.0%
ACAAGGAACTTGCGCCCTTA+AGG + chr5.4:3112310-3112329 MS.gene058117:CDS 50.0%
ACAGGACAAGACTGTGCGTA+TGG + chr5.4:3113002-3113021 MS.gene058117:intron 50.0%
ACCAGTCCAAGCCCTCAAAT+AGG - chr5.4:3112343-3112362 None:intergenic 50.0%
AGATGGCCTATTTGAGGGCT+TGG + chr5.4:3112334-3112353 MS.gene058117:CDS 50.0%
ATCCATCGAGTGTGCTTTGG+AGG + chr5.4:3109209-3109228 MS.gene058117:CDS 50.0%
ATCCTCCAAAGCACACTCGA+TGG - chr5.4:3109214-3109233 None:intergenic 50.0%
ATCCTCCTCGGTTAAGAACC+CGG + chr5.4:3110453-3110472 MS.gene058117:intron 50.0%
CAAGGAACTTGCGCCCTTAA+GGG + chr5.4:3112311-3112330 MS.gene058117:CDS 50.0%
CTGAAGGAGAGAAAAGCTGC+TGG + chr5.4:3112374-3112393 MS.gene058117:intron 50.0%
CTTTGGCAACACTGAGATCC+GGG + chr5.4:3114137-3114156 MS.gene058117:CDS 50.0%
GCTGATCTGCTTCTGATCAC+AGG + chr5.4:3110192-3110211 MS.gene058117:intron 50.0%
GGAATCCATCGAGTGTGCTT+TGG + chr5.4:3109206-3109225 MS.gene058117:CDS 50.0%
GGATCTCAGTGTTGCCAAAG+AGG - chr5.4:3114137-3114156 None:intergenic 50.0%
GTATACCGGGTTCTTAACCG+AGG - chr5.4:3110461-3110480 None:intergenic 50.0%
GTCGTCAATGACATGGGTGA+TGG - chr5.4:3112529-3112548 None:intergenic 50.0%
GTTTGCTCGCCAAGTCAACA+TGG - chr5.4:3113829-3113848 None:intergenic 50.0%
GTTTGCTCGCCAAGTCAACT+TGG - chr5.4:3109795-3109814 None:intergenic 50.0%
TCTCCACGTTGAAACCTGCA+AGG - chr5.4:3114873-3114892 None:intergenic 50.0%
TTGCCTTGCAGGTTTCAACG+TGG + chr5.4:3114867-3114886 MS.gene058117:intron 50.0%
!! AGTGTGCTTTGGAGGATCAG+TGG + chr5.4:3109217-3109236 MS.gene058117:intron 50.0%
!! ATGGTTGGTCTTGACATGGC+TGG + chr5.4:3110220-3110239 MS.gene058117:CDS 50.0%
!! ATTTGAGGGCTTGGACTGGT+TGG + chr5.4:3112343-3112362 MS.gene058117:intron 50.0%
!! CTGGTTGGCTTCAACTCTGA+AGG + chr5.4:3112358-3112377 MS.gene058117:intron 50.0%
!! GCCTTTTTGAGGGCTTAGAC+TGG + chr5.4:3115595-3115614 MS.gene058117:CDS 50.0%
!! GTGTGCTTTGGAGGATCAGT+GGG + chr5.4:3109218-3109237 MS.gene058117:intron 50.0%
ACTTGCGCCCTTAAGGGAGA+TGG + chr5.4:3112317-3112336 MS.gene058117:CDS 55.0%
GCCTATTTGAGGGCTTGGAC+TGG + chr5.4:3112339-3112358 MS.gene058117:CDS 55.0%
TACCGGGTTCTTAACCGAGG+AGG - chr5.4:3110458-3110477 None:intergenic 55.0%
TCTCGGCTTCCTAGCTGAGA+AGG - chr5.4:3114422-3114441 None:intergenic 55.0%
! GTTTGGGATCTTGGAGGGCA+AGG + chr5.4:3111568-3111587 MS.gene058117:CDS 55.0%
! GTTTGGGATGTTGGAGGGCA+AGG + chr5.4:3114922-3114941 MS.gene058117:CDS 55.0%
!! TGACAACTCTTTGGTGCCGG+AGG + chr5.4:3113041-3113060 MS.gene058117:intron 55.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 3109158 3115668 3109158 ID=MS.gene058117
chr5.4 mRNA 3109158 3115668 3109158 ID=MS.gene058117.t1;Parent=MS.gene058117
chr5.4 exon 3109158 3109235 3109158 ID=MS.gene058117.t1.exon1;Parent=MS.gene058117.t1
chr5.4 CDS 3109158 3109235 3109158 ID=cds.MS.gene058117.t1;Parent=MS.gene058117.t1
chr5.4 exon 3110017 3110121 3110017 ID=MS.gene058117.t1.exon2;Parent=MS.gene058117.t1
chr5.4 CDS 3110017 3110121 3110017 ID=cds.MS.gene058117.t1;Parent=MS.gene058117.t1
chr5.4 exon 3110214 3110304 3110214 ID=MS.gene058117.t1.exon3;Parent=MS.gene058117.t1
chr5.4 CDS 3110214 3110304 3110214 ID=cds.MS.gene058117.t1;Parent=MS.gene058117.t1
chr5.4 exon 3111524 3111645 3111524 ID=MS.gene058117.t1.exon4;Parent=MS.gene058117.t1
chr5.4 CDS 3111524 3111645 3111524 ID=cds.MS.gene058117.t1;Parent=MS.gene058117.t1
chr5.4 exon 3111761 3111820 3111761 ID=MS.gene058117.t1.exon5;Parent=MS.gene058117.t1
chr5.4 CDS 3111761 3111820 3111761 ID=cds.MS.gene058117.t1;Parent=MS.gene058117.t1
chr5.4 exon 3111918 3111983 3111918 ID=MS.gene058117.t1.exon6;Parent=MS.gene058117.t1
chr5.4 CDS 3111918 3111983 3111918 ID=cds.MS.gene058117.t1;Parent=MS.gene058117.t1
chr5.4 exon 3112236 3112360 3112236 ID=MS.gene058117.t1.exon7;Parent=MS.gene058117.t1
chr5.4 CDS 3112236 3112360 3112236 ID=cds.MS.gene058117.t1;Parent=MS.gene058117.t1
chr5.4 exon 3112436 3112515 3112436 ID=MS.gene058117.t1.exon8;Parent=MS.gene058117.t1
chr5.4 CDS 3112436 3112515 3112436 ID=cds.MS.gene058117.t1;Parent=MS.gene058117.t1
chr5.4 exon 3114046 3114158 3114046 ID=MS.gene058117.t1.exon9;Parent=MS.gene058117.t1
chr5.4 CDS 3114046 3114158 3114046 ID=cds.MS.gene058117.t1;Parent=MS.gene058117.t1
chr5.4 exon 3114236 3114326 3114236 ID=MS.gene058117.t1.exon10;Parent=MS.gene058117.t1
chr5.4 CDS 3114236 3114326 3114236 ID=cds.MS.gene058117.t1;Parent=MS.gene058117.t1
chr5.4 exon 3114878 3114999 3114878 ID=MS.gene058117.t1.exon11;Parent=MS.gene058117.t1
chr5.4 CDS 3114878 3114999 3114878 ID=cds.MS.gene058117.t1;Parent=MS.gene058117.t1
chr5.4 exon 3115120 3115179 3115120 ID=MS.gene058117.t1.exon12;Parent=MS.gene058117.t1
chr5.4 CDS 3115120 3115179 3115120 ID=cds.MS.gene058117.t1;Parent=MS.gene058117.t1
chr5.4 exon 3115268 3115333 3115268 ID=MS.gene058117.t1.exon13;Parent=MS.gene058117.t1
chr5.4 CDS 3115268 3115333 3115268 ID=cds.MS.gene058117.t1;Parent=MS.gene058117.t1
chr5.4 exon 3115492 3115668 3115492 ID=MS.gene058117.t1.exon14;Parent=MS.gene058117.t1
chr5.4 CDS 3115492 3115668 3115492 ID=cds.MS.gene058117.t1;Parent=MS.gene058117.t1
Gene Sequence

>MS.gene058117

ATGACTCTGACATGGATCGTCAATTGCAAAATCATCGCACTAAAAAGTGGAATCCATCGAGTGTGCTTTGGAGGATCAGTGGGTTCCTTCCCTGATAGACACTCTTAAGTGTAACAATGATGCTGCGTTTTTGTTTTGAGAAACATGATTATATAATCTTATGCATGTTCATTTGAGTCTGGAATGGTATGTTTGTGGGCGAGAACATTATGTATTCCTCATCATCTTCCAACAGTTGAATTTGAGGCTTGTACCTTAATCTCGGCGCTCTAATGAATTCCAGACCATGAGTTGGATAATGTACTTATTAAAATGGCGTACAAAGTGCTGGCAGACGTTATCAATCACTAAAAGGAAAATGTATTGATTTAGGGGTCATCACACTGCAGAATTTTTTTATCATATTCCACTTTCTATTTCTCCTTTTATTTTACTTTTTGAAATGAAGTAGTTTGCTATTGTGGAAAATAAAGCTAGCGAATTGAAATTAGACAGTTGAATGAGAAAACGTGGAGGTAATTAAGTTACTCAGTAAAAGGAATTAAGAAAAAGGAAGAAGGTTTAAACTAATTGCAAACACTAAACTATTGAACTGAAATTGGCTCTGAATTTCATCTCAACCAAACTAAACATGCCAAGTTGACTTGGCGAGCAAACAAACCAAGTTTGTAATATTTTGAATAAGTCAATGGTTGGACTATGTGATGTCCATAATATATTTATTATTAGGATCACCATTCTTAAGAAGGAAGAAATCAATAAAGTAAGAGGCTAAGCTACCAATTCTCATTGGGTATGGTTGTCTGTCAGAATTCAAAGTTCACACTTCAATCTCTCTCTGTCTGGTTTTGATTCTCAGCACAATTTGCACACCAGAGAATTGAAATTGAAAGCTTCCAAAGTGGTTATGGGTCAAGCTTTACGGAAGCTGTTCGACACATTCTTTGGAAACTCTGAGATACGGGTATCAAGTATCAACTATTCAACTATCAAGTACTTTTTCTTTGAAATTTGTTTGGTTGATTGCTTTCTCTGCTGATCTGCTTCTGATCACAGGTTGTGATGGTTGGTCTTGACATGGCTGGCAAAACAACTATACTCTATAAGCTCCAAATTGGAAAAGTTGTACCTACTATTCCTACTGTTGGTGTGTCTAATAATCTTCATAATTGACTTTCCAATTTTATTTTTTAAAAACTTTCTTTGGATTGATCATGATTCATCTTGCATTGCATCCGTTACATTTGTTATTTCTGTGTTGGTAGCTCAAGGATGTTAAGCTTGTGATGTGATATATCCTCCTCGGTTAAGAACCCGGTATACAGTGGTACGATACAATTACAGTAGAGACATATATGGAAACTTTTTAAAAATCAAGATATCGCACAACCGATAGACATTGATAATGTATCTAGAGAGGAGGGGGGATATGCTCAATTTTTGTAACGAAGCATTCAAATTGCTAATTACTCATTAAAACATAAACATATCAGTAGTCATTAGTCAATATATGATGATAAACAATTATTTTAAACAAATTTTGTGATCATAACAAATAGGCATAGTTACATATCTTTCCCGCCCCTATATCAGTATATACTCTTTTTACTATGAATTTGTCACAAAAAGCGCACAATTTTTCGTTGTTTGCCTGTAAGATGTATCTAAGATGTATTGTTTTCCGGGTGACAATTATGTCTTAAATTGGTAAGAAGTGTCAAAGATGTATCTGGGCAGTATTGGAAGTGTTATTTTTAAAATGGATTTAAAATATTATTTGATGCTGTACTTTTTAGGTAGGTATCAACTATCAGTCATATATTAGTATCAGATAATACTAATACTATTTTGGAATTATTTGGCCTTAATAGCTCCTCAGTTATCTACTTGGCTTTTTCTTCCCCTTGCTTTGTATTGGTATGAATGAGGTTAAGCAGACTAGCATACATGGTTCCTTGGCTGTGTAAAGACATGTGAAGCTTTTTGATGATCATGCTAGTTTTCGAACAACTTAAATCTTATTTTTGCTAGATCTAAAGTTGGACATGCTAGTAGTTTGTTAATGATAGTTGTGAAATCTATACTTTAATGTATTAATTGCTGTTAAGTACTTGAGTCTTAACTGTTTGCCTTTCATACAAGATTATATTTCAGTTCTGCTATCCAACTTGTTGTAGCACTGTTTGTCCTCTTTGATATTTCTGCCAAGAAATTATTGACAGTGCTTATGGTAGGATTTTCCATGTTATGACCAATAATCACCAACCGACTTTTTTGGAACTTTCTAAATTCATTTCATCAAGGGTTTCTTTGACAAGGGTCTATATGTTTTTTCTGTAGGGTTAACAATTTACTTTGCATTGCAGGTTTCAATGTGGAGAAAGTTGAGTATAAGAATGTTGATTTTACAGTTTGGGATCTTGGAGGGCAAGGACTACACAAATTAAGGCCAGTTTGGAGGCACTTTTTTAACAACATTGATGGTTTGGTAAGAATCAGTTTCATTGCTTGTCTCTTTCTCAGTGAAAAGAAAATATATACAATGCTGGCAGTTTTATGAAAGATTCCTTCTTTAACCTACATTAATATGTGCAATTATAAAGATTTATGTTGTTGATAGCATGGAGCGTGAGAGATTAGATCAAGCAAAGCACGAATTTCAGGTGGTAAAATCAAATTTCGCGATAGTATTAATATGTGCATATCTGTATATTATATATTGACAATTATAAACTGAACTGGTTCATGAATTACTTGCAGACAATCATAAATGAGCCTACTATGCTTAATAATATCATATTGGTGTTTGCAAACAAACAGGACCTGGCAAGTCTTTGTTACTTCTTTTTTATTTATGTTCTTTCAATTGTTATTTATTACTTATATTAAATACTATGTTTTGGATGTAAATTTGTTTATGTCCATATAATAATTTCCACCTTCTCAAATATTTTAAAAGAATTTTTTTTTTTTTTTTTTATAGGCTAGCTTGAGCAAAATACTCTCCTCAAACAATTTGAGTTTTGCTTTTTGCTCAAGTCTTGTCATGATTGTCGATATTTTCTTATTCTTTTGTAGAAAGGAGCAATGACGCTAACAGAAGTATGTGAAGGACTAGGTCTGTTTGATCTAAGGAATAGAAAGTGGCACATACAAGGAACTTGCGCCCTTAAGGGAGATGGCCTATTTGAGGGCTTGGACTGGTTGGCTTCAACTCTGAAGGAGAGAAAAGCTGCTGGATGCTCTTCAACATGAACCTCATCCTTCTAATTGTTAAGGTTTGAACTACACTCTCCGTTGTTCACGAGTTTCATACTTCATTATTTTCATGACATCACGGGTTTATTGTATACTACAGGTATTTTGGCCCATCACCCATGTCATTGACGACGAACATGTAGAGTTTGACCAGTTTCATTCAAGAGTAATGTAGATTGTAGGAAAAGATTTAGTATAAACCCATGTTATGTAAATACTAAACCACAACATGTTCAATCGTGATCTATGTATAAAACTAAGTTAGAATTTTGTGTATCTGGAATAAAATATGGGTCCATTTTCCTGTTATGAGAGTTGTGAAGGAAACTATGAGAGAAAATTGGAGAATGCTGAGAGTGAACTATCCTCTATCCGATGAACGTATCATCTGAAAAGATCTGTCTTATGAGAAAACAATTTCATTACTTACTAAATATTATCCTAATCAGTGACTTATTAAATTTCAAAATATATTCTGAATAAGGATAAAACTTGTGTGCTTTTCTTTAAATGTTGTTCATATTGTTCACCAATTATAATATTACGTGCGTAAAAACTTTTAGATTAACTTAAATGAAAATAAATTACAGGACAAGACTGTGCGTATGGATAATCTCGAGTCATATGACAACTCTTTGGTGCCGGAGGAATGAGAAATTATGGGATAACAAGGATGCATAATGCATCTTCTTGTCAAGTTACTCAAAAGAGCCGTGCCCTTCTTAAATGAATCCGATATGGGTTGTCAATTGCAAAATCACTGCACTGGAAAGTGGAATCCATCGAGTTGCTTTTGAAGATCAGTAGGTTTCTTCCTTGATAGGCACTCTTAAGTGTAAGAATGATGCTAAATTTTCTAAGGAACATGGTTATATATTCTTATGTATGTGCATTTGAGACTTGAATAGTATGTTTGTGTGGCGTTATGTACTCCTCCTCATCATCTTCCAACAGTTGAATGTGAGGCTTTTGCCTTACTCTCGGTGTTCTATTGGATTCTAGACCATGAGTTGGACAATGTAATGATTGAAATGGTGTACAAAGTAGTGCCAGACATTATTAATCACTTGAAGGAAAATGTCTTTGATTTTGATTTACACGAATGATATTGCACACAATCTAACACAGGCAACACCTTTCATGATTAGTCTACAATTTTTTTTTAATCATATTCCATTTTCTATTCCCCCTTTTATTTTATTTTTTTTGAAATGAAGTAGTTTGCTTTTGTGGCAAATAAATTTAGCAAATTTTAGTCAGTTGGATGAGAAAACGTCGAGGTAATTAAGTTATTTTCATGTAGCAAAAGGAATTAAGAAAAATGAAGAATGTTCAAAGTTAAAATTATATTGCAAGCATCAAAACTATTGAACTGAAATTGGCTCTGGAATTTCATCAACACCAAACATGCCATGTTGACTTGGCGAGCAAACAAACCAAATGTTTAATATTTTGAATAATTCAATGGTTGGACTATGTGATGTCCATAATATATTATTAGGATCACCATTCTTAAGAAGGAAGAAATCAATAAAGTAAGAGGCTAAGCTACAAGTTCCCATTGGTTGGTATTGTTTTTTGTTAAAATTCAAAGTCCACACTTCAATCTATATCTATCTCTCTTTTTCAGATTCTCAGCACAAATTGCAAACTAGAATTGAAATTGAAAGCTTTCAAGTGGTTATTATGGGTCAAGCTTTCCGGAAGCTGTTTGATACCCTCTTTGGCAACACTGAGATCCGGGTATCAACCATCAACTATTTTCTCTTTGAAATTTGTTTGTTTCCTTGCTTATTCTAAAGATCCGCTTCTGATCACAGGTTGTGATGGTTGGTCTTGACAATGCTGGCAAAACAACTATACTCTATAAGCTTCAAATTGGAAAAGTTGTATCTACTATTCCTACAGTTGGTATGTCTAATAATCTTCATGATTCATCTTGCATTTTGCATCCATTTCATGTGTTGGTAGCTCAAGGAATTTAAGTTTGTGATCTGATATTTCCTTCTCAGCTAGGAAGCCGAGATAAACAGTACGATACAGAAAATTATTCAAATTGCTAACTACTCATTAAAACATAAACATTATTCAATATATGATGATTGAAATTATAACACCTGTGAGCATAACAAATAAGCATAGTTACGTATCGTTCCCCTACCTATATCAGTATATAGTCTTTCTACTATGAATCTGTCGCAGAAAGTGTACAATTGTGTCTTTAGTTTGTAAGAACATATATAAGATGTACTTTATTTCGATGACAATTGTGTCTTTAATTGTTGAGAAGTGTTGAAGATATATCTAACTAATAATATTTCTGTCTTTTTGAAGATTAAGCCAGTTTGTGCACTTTCGTTGATACTTTTGTCAAAAAATTATTGAAAGTGTTTATGAAGGGCCTACTTGACATGGGTCTATATGTTGTTTCGTTAGGCTTAACAATTTATTTTGCCTTGCAGGTTTCAACGTGGAGAAAGTTGAGTATAAGAATGTTGATTTTACGGTTTGGGATGTTGGAGGGCAAGGACGACACAATTTAAGACCACTTTGGAAGAACTATTTTACCAACTTTGATGGTATGGTAAGAACCAATTTCCTTGCTTTTATGTCTCTTTCTCGGTGAAAAGAAAATTTGTGTTATGCTTACGATTTTGTGAAAAGATTCCTTCCTTCACTTACGTTAGTATGTGCATCGATGCAGATTTATGTTGTTGATTGCCATGACCGTGAGAGAATAGATCAAGTAAAGCAGGAATTTCAGGTGGTAAAATCAAATTTCATTATAGTTTTTTATATGTGTGTGTATTACTGGCGATTATAAACTGAATTGATTCATGGATTACTTGCAGACAACCATAAACGAGCCTTCTATGCTTAACAATATCATATTGGTGTTTGCAAACAAACAGGACCTGGCAAGTCTTTGTTACTTCTTTTTTATTTCTGTTCTTTCTACTGCATACAATTGGTTAAGAAGAGTGTAGGAAACCCTACCATTTTAGTCCCTCATATTGAGTTTTGCTTTGAGGTCAAGTTTAGCCATGATTGTCAATATTTTCTTATTCTTTTGTAGAAAGGAGCGATGACGATAACGGAAGTATGTGAAGGATTAGGCCTGTTTGATCTAAGGAATAGAAAATGGCACATACAAGGAACTTGTGCTCTAAAGGGAGATGGCCTTTTTGAGGGCTTAGACTGGTTGGCTTCAACTTTGAAGGAGAAAAAAGCTGCTGAATATTCTTCAATGTGA

Protein sequence

>MS.gene058117.t1

MTLTWIVNCKIIALKSGIHRVCFGGSHNLHTRELKLKASKVVMGQALRKLFDTFFGNSEIRVVMVGLDMAGKTTILYKLQIGKVVPTIPTVGFNVEKVEYKNVDFTVWDLGGQGLHKLRPVWRHFFNNIDGLIYVVDSMERERLDQAKHEFQTIINEPTMLNNIILVFANKQDLKGAMTLTEVCEGLGLFDLRNRKWHIQGTCALKGDGLFEGLDWFELHSPLFTSFILHYFHDITGLLYTTDSQHKLQTRIEIESFQVVIMGQAFRKLFDTLFGNTEIRVVMVGLDNAGKTTILYKLQIGKVVSTIPTVGFNVEKVEYKNVDFTVWDVGGQGRHNLRPLWKNYFTNFDGMIYVVDCHDRERIDQVKQEFQTTINEPSMLNNIILVFANKQDLKGAMTITEVCEGLGLFDLRNRKWHIQGTCALKGDGLFEGLDWLASTLKEKKAAEYSSM