Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40692.t1 | KEH36102.1 | 69.8 | 744 | 89 | 10 | 29 | 636 | 791 | 1534 | 1.80E-269 | 938.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40692.t1 | F4JV59 | 48.3 | 757 | 241 | 13 | 29 | 636 | 760 | 1515 | 3.1e-161 | 570.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40692.t1 | A0A072V2L4 | 69.8 | 744 | 89 | 10 | 29 | 636 | 791 | 1534 | 1.3e-269 | 938.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050807 | MS.gene40692 | 0.804872 | 1.75E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene40692 | 0.817811 | 2.72E-52 | -1.69E-46 |
| MS.gene051800 | MS.gene40692 | 0.808105 | 3.65E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene40692 | 0.800621 | 1.32E-48 | -1.69E-46 |
| MS.gene052863 | MS.gene40692 | 0.80953 | 1.81E-50 | -1.69E-46 |
| MS.gene055926 | MS.gene40692 | 0.824259 | 8.89E-54 | -1.69E-46 |
| MS.gene05604 | MS.gene40692 | 0.800443 | 1.44E-48 | -1.69E-46 |
| MS.gene056173 | MS.gene40692 | 0.815065 | 1.12E-51 | -1.69E-46 |
| MS.gene056507 | MS.gene40692 | 0.805776 | 1.13E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene40692 | 0.803531 | 3.33E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene40692 | 0.834349 | 3.16E-56 | -1.69E-46 |
| MS.gene058010 | MS.gene40692 | 0.838814 | 2.30E-57 | -1.69E-46 |
| MS.gene059439 | MS.gene40692 | 0.815597 | 8.52E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene40692 | 0.802462 | 5.55E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene40692 | 0.807005 | 6.24E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40692.t1 | MTR_3g110417 | 72.446 | 744 | 69 | 10 | 29 | 636 | 791 | 1534 | 0.0 | 993 |
| MS.gene40692.t1 | MTR_3g110417 | 66.156 | 783 | 89 | 13 | 29 | 636 | 791 | 1572 | 0.0 | 924 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40692.t1 | AT4G32820 | 46.499 | 757 | 255 | 14 | 29 | 636 | 760 | 1515 | 0.0 | 582 |
| MS.gene40692.t1 | AT4G32820 | 46.499 | 757 | 255 | 14 | 29 | 636 | 760 | 1515 | 0.0 | 581 |
| MS.gene40692.t1 | AT4G32820 | 45.953 | 766 | 255 | 15 | 29 | 636 | 760 | 1524 | 0.0 | 574 |
Find 117 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGACATGCTTGCTGAATA+TGG | 0.206451 | 3.3:-91487194 | MS.gene40692:CDS |
| GCATGAAGGGTTACTAAAAT+TGG | 0.229679 | 3.3:-91484236 | MS.gene40692:CDS |
| CTGTAACTTGTATCATTTCT+TGG | 0.239538 | 3.3:-91486042 | MS.gene40692:CDS |
| CAGAGGTAATTCATCAATTC+TGG | 0.266446 | 3.3:+91486956 | None:intergenic |
| ATGAATTACCTCTGTCAAAA+AGG | 0.283236 | 3.3:-91486947 | MS.gene40692:CDS |
| CCAGCATGTATCTAGCCTTA+TGG | 0.339349 | 3.3:+91484137 | None:intergenic |
| ATGCTTTGTTTCCACAGAAT+TGG | 0.342449 | 3.3:+91484255 | None:intergenic |
| AGGGGTGAGAGTGGTGATAT+AGG | 0.347013 | 3.3:-91484097 | MS.gene40692:CDS |
| TTTCCTGATGTGGGAGGTCT+TGG | 0.352920 | 3.3:-91486268 | MS.gene40692:CDS |
| AACAAATTCTTCCCCTTCCT+TGG | 0.359521 | 3.3:+91485968 | None:intergenic |
| AAATGAGTGCAACAGATAAA+TGG | 0.362829 | 3.3:-91486007 | MS.gene40692:CDS |
| TGGCTCAAGGGTTGTATAGA+AGG | 0.366996 | 3.3:-91484117 | MS.gene40692:CDS |
| TTTCAGGTCTGAGCCATACT+TGG | 0.392986 | 3.3:-91486072 | MS.gene40692:intron |
| AGTTTATCTTCACATAGATT+AGG | 0.394004 | 3.3:+91486343 | None:intergenic |
| CAGTACTGTCAATGTAACTA+TGG | 0.397415 | 3.3:-91487021 | MS.gene40692:CDS |
| CATCACTAGATCATCTTCAT+AGG | 0.405374 | 3.3:+91486672 | None:intergenic |
| CATAGGATGAATCAGACCTT+AGG | 0.426935 | 3.3:+91486689 | None:intergenic |
| ACAGAAGATTCCTTTGCATA+AGG | 0.439245 | 3.3:+91486582 | None:intergenic |
| GTTTATATGGATTAAACCTA+AGG | 0.440586 | 3.3:-91486705 | MS.gene40692:CDS |
| TTACAGTAGACATCCAAGTA+TGG | 0.446919 | 3.3:+91486059 | None:intergenic |
| AACGTGCATATGTTTCTCTC+CGG | 0.447127 | 3.3:-91483456 | MS.gene40692:CDS |
| CAGCTGTTGATCCTGTCTAT+AGG | 0.448877 | 3.3:-91484616 | MS.gene40692:CDS |
| ATCCTCTGCGCTTTGAAAGC+TGG | 0.453760 | 3.3:-91485905 | MS.gene40692:CDS |
| TTTCCTGTCAAGAGGTCCTC+TGG | 0.454529 | 3.3:+91486391 | None:intergenic |
| AATCTGATACATTAGATATC+CGG | 0.459851 | 3.3:-91486989 | MS.gene40692:CDS |
| AATAAAGCATCTCTTGGCCT+TGG | 0.461847 | 3.3:-91487114 | MS.gene40692:CDS |
| CATTAGATATCCGGATGGAT+TGG | 0.466592 | 3.3:-91486980 | MS.gene40692:CDS |
| GCTTTATTGTCAATATGATA+AGG | 0.468717 | 3.3:+91484656 | None:intergenic |
| ATGACATGCTTGCTGAATAT+GGG | 0.471778 | 3.3:-91487193 | MS.gene40692:CDS |
| TCATCTAGGAAATTATCAAT+TGG | 0.478352 | 3.3:+91486367 | None:intergenic |
| GTGTGGTTCCGCTAAGATGC+TGG | 0.479179 | 3.3:+91487361 | None:intergenic |
| TGCAAACTCCAGCATCTTAG+CGG | 0.479722 | 3.3:-91487369 | MS.gene40692:CDS |
| ATCTGTTGCACTCATTTCCT+CGG | 0.481951 | 3.3:+91486013 | None:intergenic |
| CGCTTGAAAACTTGTGTCGA+GGG | 0.483510 | 3.3:-91484174 | MS.gene40692:CDS |
| ATTTGCAATAAAGCATCTCT+TGG | 0.486634 | 3.3:-91487120 | MS.gene40692:CDS |
| GCACCAGAGGACCTCTTGAC+AGG | 0.487187 | 3.3:-91486394 | MS.gene40692:CDS |
| TTCTCTCCGGGGAGATAAGC+GGG | 0.489105 | 3.3:-91483443 | None:intergenic |
| AGTGCAACAGATAAATGGCC+TGG | 0.492997 | 3.3:-91486002 | MS.gene40692:CDS |
| TTGTATAGAAGGGGTGAGAG+TGG | 0.499028 | 3.3:-91484106 | MS.gene40692:CDS |
| GGCTCAAGGGTTGTATAGAA+GGG | 0.503163 | 3.3:-91484116 | MS.gene40692:CDS |
| AGAGTGGAAACAAGCGAAGA+AGG | 0.503981 | 3.3:-91485645 | MS.gene40692:CDS |
| TCCTTGGTCAGCACAAATCC+AGG | 0.504054 | 3.3:+91485984 | None:intergenic |
| TGTCCAAGACCTCCCACATC+AGG | 0.504315 | 3.3:+91486265 | None:intergenic |
| GATAAACTATCAGAGGAGGC+TGG | 0.504589 | 3.3:-91486328 | MS.gene40692:CDS |
| GAAGCTGTCACAAGTATCCT+TGG | 0.504777 | 3.3:-91484325 | MS.gene40692:CDS |
| TTTGAAAGCTGGCAGCGACT+TGG | 0.505444 | 3.3:-91485894 | MS.gene40692:CDS |
| ACGTGCATATGTTTCTCTCC+GGG | 0.512551 | 3.3:-91483455 | MS.gene40692:CDS |
| TAAGACCATGTTTCCTGATG+TGG | 0.513573 | 3.3:-91486278 | MS.gene40692:CDS |
| GATTTACCCGCTTATCTCCC+CGG | 0.515712 | 3.3:+91483437 | None:intergenic |
| CACATAGATTAGGATCATCT+AGG | 0.516471 | 3.3:+91486353 | None:intergenic |
| GGATTTGTGCTGACCAAGGA+AGG | 0.517773 | 3.3:-91485981 | MS.gene40692:CDS |
| TCAGAGGAGGCTGGGTCTGA+AGG | 0.518703 | 3.3:-91486319 | MS.gene40692:CDS |
| ATTTGACAAAGGCTGCTTGT+TGG | 0.521794 | 3.3:+91487515 | None:intergenic |
| GGAACTCAAACATTTCCATA+AGG | 0.523543 | 3.3:-91484152 | MS.gene40692:CDS |
| GCTAGATACATGCTGGCTCA+AGG | 0.524293 | 3.3:-91484130 | MS.gene40692:CDS |
| GTGAGAGTGGTGATATAGGA+GGG | 0.527450 | 3.3:-91484093 | MS.gene40692:CDS |
| GTGTGAGATACATGAGTTGT+TGG | 0.528044 | 3.3:-91484965 | MS.gene40692:CDS |
| CTCAAACTATTGGAGGAGAC+AGG | 0.530746 | 3.3:-91483496 | MS.gene40692:CDS |
| TTACAGATTGATCAAGGCGT+AGG | 0.532579 | 3.3:+91484350 | None:intergenic |
| CTGTGGAAACAAAGCATGAA+GGG | 0.532971 | 3.3:-91484249 | MS.gene40692:CDS |
| TCCACTCTCTCAGATAAAGT+AGG | 0.535432 | 3.3:+91485660 | None:intergenic |
| CAATTCTGGTCCAATCCATC+CGG | 0.535755 | 3.3:+91486970 | None:intergenic |
| AGCAAGCACATTAACGTAGT+AGG | 0.535784 | 3.3:-91485696 | MS.gene40692:CDS |
| GATACATGAGTTGTTGGCAT+TGG | 0.537894 | 3.3:-91484959 | MS.gene40692:CDS |
| GGTGAGAGTGGTGATATAGG+AGG | 0.540876 | 3.3:-91484094 | MS.gene40692:CDS |
| GAATATGGGCTTTGCTGTGT+CGG | 0.544968 | 3.3:-91487179 | MS.gene40692:CDS |
| GAGGCATGCATCCTATAGAC+AGG | 0.547988 | 3.3:+91484605 | None:intergenic |
| CACAAATGCTTTCATGACAA+AGG | 0.550199 | 3.3:+91487569 | None:intergenic |
| CTTTGCTGTGTCGGTGAAGG+TGG | 0.552483 | 3.3:-91487170 | MS.gene40692:CDS |
| ATAAACTATCAGAGGAGGCT+GGG | 0.553461 | 3.3:-91486327 | MS.gene40692:CDS |
| CTAGATACATGCTGGCTCAA+GGG | 0.556412 | 3.3:-91484129 | MS.gene40692:CDS |
| CCATAAGGCTAGATACATGC+TGG | 0.563890 | 3.3:-91484137 | MS.gene40692:CDS |
| GAAGGTGGCAAAGGTGGAGA+AGG | 0.565297 | 3.3:-91487155 | MS.gene40692:CDS |
| ATAACTCAACACTGTTGAAG+AGG | 0.566058 | 3.3:-91486240 | MS.gene40692:intron |
| TAGCTCATCTTTAAATACAA+AGG | 0.567923 | 3.3:-91484293 | MS.gene40692:CDS |
| GCGCTTGAAAACTTGTGTCG+AGG | 0.569005 | 3.3:-91484175 | MS.gene40692:CDS |
| CAATTGGATTTCCTGTCAAG+AGG | 0.571240 | 3.3:+91486383 | None:intergenic |
| AACACTTTCTTCAGCACCAG+AGG | 0.571629 | 3.3:-91486407 | MS.gene40692:CDS |
| TCATTTCTTGGCTGTGTCCG+AGG | 0.572138 | 3.3:-91486030 | MS.gene40692:CDS |
| TGAGATAAAAGCACATACTT+CGG | 0.572747 | 3.3:+91483515 | None:intergenic |
| ATTTGTGCTGACCAAGGAAG+GGG | 0.577007 | 3.3:-91485979 | MS.gene40692:CDS |
| AAATAATAGTTTCAAGCGTG+AGG | 0.577070 | 3.3:+91484586 | None:intergenic |
| TACTAAAATTGGATACTGCA+TGG | 0.577199 | 3.3:-91484225 | MS.gene40692:CDS |
| GTATGTTCTTCCTTATGCAA+AGG | 0.581214 | 3.3:-91486592 | MS.gene40692:CDS |
| TCCTACTTTATCTGAGAGAG+TGG | 0.583147 | 3.3:-91485661 | MS.gene40692:CDS |
| ACCTCCCACATCAGGAAACA+TGG | 0.588407 | 3.3:+91486273 | None:intergenic |
| GTCGGTGAAGGTGGCAAAGG+TGG | 0.588547 | 3.3:-91487161 | MS.gene40692:CDS |
| GGGCTTTGCTGTGTCGGTGA+AGG | 0.588643 | 3.3:-91487173 | MS.gene40692:CDS |
| AAGACCATGTTTCCTGATGT+GGG | 0.598107 | 3.3:-91486277 | MS.gene40692:CDS |
| AGCACATTAACGTAGTAGGA+TGG | 0.598601 | 3.3:-91485692 | MS.gene40692:CDS |
| ATGAGCTATCTGTGCTGCCA+AGG | 0.599454 | 3.3:+91484308 | None:intergenic |
| TCTGTGGAAACAAAGCATGA+AGG | 0.601277 | 3.3:-91484250 | MS.gene40692:CDS |
| GGATTTAAACGTCATATCCA+AGG | 0.601832 | 3.3:+91487097 | None:intergenic |
| ACAGAATGCAGAGATTCTGA+AGG | 0.603422 | 3.3:-91484552 | MS.gene40692:CDS |
| ATGTATCAATGCCAATTCTG+TGG | 0.604615 | 3.3:-91484266 | MS.gene40692:CDS |
| GATTTGTGCTGACCAAGGAA+GGG | 0.604835 | 3.3:-91485980 | MS.gene40692:CDS |
| ACTTGGAAATATTTATGATG+AGG | 0.606234 | 3.3:-91485877 | MS.gene40692:intron |
| ATCAGAGATTACTTGTGCCG+AGG | 0.614366 | 3.3:+91487434 | None:intergenic |
| ACAAGTAATCTCTGATCAAG+TGG | 0.625155 | 3.3:-91487427 | MS.gene40692:CDS |
| TTTCTCTCCGGGGAGATAAG+CGG | 0.626453 | 3.3:-91483444 | MS.gene40692:CDS |
| ATGTGAAGATAAACTATCAG+AGG | 0.626603 | 3.3:-91486335 | MS.gene40692:CDS |
| TGTGTCGGTGAAGGTGGCAA+AGG | 0.635270 | 3.3:-91487164 | MS.gene40692:CDS |
| AGCAGAGATGCATTTGACAA+AGG | 0.638374 | 3.3:+91487504 | None:intergenic |
| GCTCAAGGGTTGTATAGAAG+GGG | 0.642293 | 3.3:-91484115 | MS.gene40692:CDS |
| TGAAGATAAACTATCAGAGG+AGG | 0.644438 | 3.3:-91486332 | MS.gene40692:CDS |
| GTAGATTTGTTACTTAACGA+TGG | 0.646292 | 3.3:-91485720 | MS.gene40692:CDS |
| TTGAAACTATTATTTAAGCG+CGG | 0.651066 | 3.3:-91484578 | MS.gene40692:CDS |
| TGCCAGCTTTCAAAGCGCAG+AGG | 0.657862 | 3.3:+91485903 | None:intergenic |
| ACATTAACGTAGTAGGATGG+AGG | 0.659421 | 3.3:-91485689 | MS.gene40692:CDS |
| GGCTGCTTGTTGGAACTGTG+TGG | 0.664295 | 3.3:+91487525 | None:intergenic |
| CGTGCATATGTTTCTCTCCG+GGG | 0.664622 | 3.3:-91483454 | MS.gene40692:CDS |
| GCCTGGATTTGTGCTGACCA+AGG | 0.675397 | 3.3:-91485985 | MS.gene40692:CDS |
| TGATACATTAGATATCCGGA+TGG | 0.677527 | 3.3:-91486985 | MS.gene40692:CDS |
| ACTTGTCTGTAACAAAACCT+CGG | 0.682353 | 3.3:-91487451 | MS.gene40692:CDS |
| CTGGAGTTTGCAGAAAACAA+TGG | 0.682930 | 3.3:+91487380 | None:intergenic |
| GCTTGAAAACTTGTGTCGAG+GGG | 0.689678 | 3.3:-91484173 | MS.gene40692:CDS |
| ACCATGTTTCCTGATGTGGG+AGG | 0.709193 | 3.3:-91486274 | MS.gene40692:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAAAAAATTTGCAATTT+TGG | + | chr3.3:91484514-91484533 | None:intergenic | 10.0% |
| !! | ATTAAGTTTAAACTAACAAA+AGG | + | chr3.3:91487110-91487129 | None:intergenic | 15.0% |
| !! | CAAGTTATATAAAACAAATT+GGG | + | chr3.3:91487281-91487300 | None:intergenic | 15.0% |
| !! | TAAATTTCATATATGTTTCT+TGG | - | chr3.3:91485257-91485276 | MS.gene40692:intron | 15.0% |
| !! | TCAAGTTATATAAAACAAAT+TGG | + | chr3.3:91487282-91487301 | None:intergenic | 15.0% |
| !! | TGAAATTTATAATGTTTAAC+AGG | + | chr3.3:91485246-91485265 | None:intergenic | 15.0% |
| !!! | AATTTGTTTTATATAACTTG+AGG | - | chr3.3:91487281-91487300 | MS.gene40692:intron | 15.0% |
| !!! | TTTATTTTTAAGGTTAAAGA+TGG | + | chr3.3:91483944-91483963 | None:intergenic | 15.0% |
| !!! | TTTTTAAATTTTTCTTCTCT+TGG | - | chr3.3:91485477-91485496 | MS.gene40692:intron | 15.0% |
| !!! | TTTTTATTGCACATTTTTTT+TGG | + | chr3.3:91485659-91485678 | None:intergenic | 15.0% |
| !! | ACTCAATAAATAACATTTGA+TGG | - | chr3.3:91487311-91487330 | MS.gene40692:intron | 20.0% |
| !! | ACTTGAATAAATAAACTCTT+GGG | - | chr3.3:91485748-91485767 | MS.gene40692:intron | 20.0% |
| !! | ATAATCTTACTTTCAATGAT+GGG | - | chr3.3:91483714-91483733 | MS.gene40692:intron | 20.0% |
| !! | CAAGTCAACTATAAAATTAT+AGG | + | chr3.3:91486585-91486604 | None:intergenic | 20.0% |
| !! | TATAATCTTACTTTCAATGA+TGG | - | chr3.3:91483713-91483732 | MS.gene40692:intron | 20.0% |
| !! | TTATATAAAACAAATTGGGA+AGG | + | chr3.3:91487277-91487296 | None:intergenic | 20.0% |
| !! | TTCCTATGAATCATATTTAA+TGG | - | chr3.3:91484862-91484881 | MS.gene40692:intron | 20.0% |
| !!! | ATCAAATGTTATTTATTGAG+TGG | + | chr3.3:91487312-91487331 | None:intergenic | 20.0% |
| !!! | CTTTTCACTTGTATTATTAT+TGG | - | chr3.3:91487068-91487087 | MS.gene40692:CDS | 20.0% |
| !!! | GAATCGTGTTTTTTTTTAAA+AGG | + | chr3.3:91485824-91485843 | None:intergenic | 20.0% |
| !!! | GCATTGATTCTTTATTTTTA+AGG | + | chr3.3:91483954-91483973 | None:intergenic | 20.0% |
| !!! | TTTTATGTTTCTTAGAAAAC+TGG | - | chr3.3:91484549-91484568 | MS.gene40692:CDS | 20.0% |
| ! | AAAATGTCGGACAATATTTA+AGG | - | chr3.3:91485633-91485652 | MS.gene40692:intron | 25.0% |
| ! | AAAGTAAGATTATATCACGA+AGG | + | chr3.3:91483707-91483726 | None:intergenic | 25.0% |
| ! | AACCTAAGAAGATAAAAACA+AGG | + | chr3.3:91484909-91484928 | None:intergenic | 25.0% |
| ! | AATCTGATACATTAGATATC+CGG | - | chr3.3:91484028-91484047 | MS.gene40692:intron | 25.0% |
| ! | AATTAAGTGCAGATAACATT+TGG | + | chr3.3:91485603-91485622 | None:intergenic | 25.0% |
| ! | ACTTGGAAATATTTATGATG+AGG | - | chr3.3:91485140-91485159 | MS.gene40692:intron | 25.0% |
| ! | ACTTTGCATTTAATGATATC+AGG | - | chr3.3:91487397-91487416 | MS.gene40692:CDS | 25.0% |
| ! | AGCCATTAAATATGATTCAT+AGG | + | chr3.3:91484867-91484886 | None:intergenic | 25.0% |
| ! | AGGTAAGTTTAAATGCAATT+TGG | - | chr3.3:91485160-91485179 | MS.gene40692:intron | 25.0% |
| ! | AGTTTATCTTCACATAGATT+AGG | + | chr3.3:91484677-91484696 | None:intergenic | 25.0% |
| ! | ATCATTTACCATAAACATGT+GGG | - | chr3.3:91486987-91487006 | MS.gene40692:CDS | 25.0% |
| ! | ATTTCGTTTACTCAAAATGT+CGG | - | chr3.3:91485620-91485639 | MS.gene40692:intron | 25.0% |
| ! | CACTTGAATAAATAAACTCT+TGG | - | chr3.3:91485747-91485766 | MS.gene40692:intron | 25.0% |
| ! | CTTATAAAACCTTGATTCTT+CGG | - | chr3.3:91485183-91485202 | MS.gene40692:intron | 25.0% |
| ! | GATAAAAACAAGGAATATCA+TGG | + | chr3.3:91484899-91484918 | None:intergenic | 25.0% |
| ! | TAAAATAAGACACAAAGAAG+AGG | + | chr3.3:91486222-91486241 | None:intergenic | 25.0% |
| ! | TAGCTCATCTTTAAATACAA+AGG | - | chr3.3:91486724-91486743 | MS.gene40692:CDS | 25.0% |
| ! | TCATCTAGGAAATTATCAAT+TGG | + | chr3.3:91484653-91484672 | None:intergenic | 25.0% |
| ! | TGTGGAAAAAAAAAACAGTA+TGG | + | chr3.3:91484815-91484834 | None:intergenic | 25.0% |
| ! | TTATCTTCTTAGGTTTATCT+CGG | - | chr3.3:91484914-91484933 | MS.gene40692:intron | 25.0% |
| ! | TTGAAACTATTATTTAAGCG+CGG | - | chr3.3:91486439-91486458 | MS.gene40692:intron | 25.0% |
| !! | ATTGATAGCATGACAAAAAA+AGG | - | chr3.3:91487013-91487032 | MS.gene40692:CDS | 25.0% |
| !! | ATTTGAAATATACAATCTCG+TGG | - | chr3.3:91487225-91487244 | MS.gene40692:intron | 25.0% |
| !! | GCTTTATTGTCAATATGATA+AGG | + | chr3.3:91486364-91486383 | None:intergenic | 25.0% |
| !! | GTAGAAATTAGTTTAGGAAT+TGG | + | chr3.3:91487379-91487398 | None:intergenic | 25.0% |
| !! | GTTTATATGGATTAAACCTA+AGG | - | chr3.3:91484312-91484331 | MS.gene40692:CDS | 25.0% |
| !! | TAGAAATACCAAAGTATTTG+TGG | + | chr3.3:91487190-91487209 | None:intergenic | 25.0% |
| !! | TGCAAAGTAGAAATTAGTTT+AGG | + | chr3.3:91487385-91487404 | None:intergenic | 25.0% |
| !!! | TTATAGTTGACTTGATGATT+TGG | - | chr3.3:91486591-91486610 | MS.gene40692:CDS | 25.0% |
| !!! | TTCCTTGTTTTTATCTTCTT+AGG | - | chr3.3:91484904-91484923 | MS.gene40692:intron | 25.0% |
| AAATAATAGTTTCAAGCGTG+AGG | + | chr3.3:91486434-91486453 | None:intergenic | 30.0% | |
| AAATGAGTGCAACAGATAAA+TGG | - | chr3.3:91485010-91485029 | MS.gene40692:intron | 30.0% | |
| AAATGCCTTTAGATTTCCTT+CGG | + | chr3.3:91484102-91484121 | None:intergenic | 30.0% | |
| AACATTTGGATGGAATGTTT+AGG | + | chr3.3:91485589-91485608 | None:intergenic | 30.0% | |
| AAGTCAGAATAAAGACAGTA+AGG | - | chr3.3:91484130-91484149 | MS.gene40692:CDS | 30.0% | |
| AATGAACTTTCAGAAGATGA+AGG | - | chr3.3:91484240-91484259 | MS.gene40692:CDS | 30.0% | |
| ACAGAATCAATATGTTTACC+TGG | + | chr3.3:91485799-91485818 | None:intergenic | 30.0% | |
| ACAGATCTCTGATCATAAAA+TGG | + | chr3.3:91486114-91486133 | None:intergenic | 30.0% | |
| ACATTTGGATGGAATGTTTA+GGG | + | chr3.3:91485588-91485607 | None:intergenic | 30.0% | |
| AGATCTCTGATCATAAAATG+GGG | + | chr3.3:91486112-91486131 | None:intergenic | 30.0% | |
| ATAGCATGACAAAAAAAGGA+AGG | - | chr3.3:91487017-91487036 | MS.gene40692:CDS | 30.0% | |
| ATGAACTTTCAGAAGATGAA+GGG | - | chr3.3:91484241-91484260 | MS.gene40692:CDS | 30.0% | |
| ATGAATATTCCGAAGAATCA+AGG | + | chr3.3:91485195-91485214 | None:intergenic | 30.0% | |
| ATGAATTACCTCTGTCAAAA+AGG | - | chr3.3:91484070-91484089 | MS.gene40692:intron | 30.0% | |
| ATGTGAAGATAAACTATCAG+AGG | - | chr3.3:91484682-91484701 | MS.gene40692:CDS | 30.0% | |
| CAAGTGAAAAGATAACAGAA+AGG | + | chr3.3:91487059-91487078 | None:intergenic | 30.0% | |
| CAATTAAATCAACCTGAGTT+GGG | + | chr3.3:91483795-91483814 | None:intergenic | 30.0% | |
| CAGAAACAGTTGATTATTGA+TGG | - | chr3.3:91487145-91487164 | MS.gene40692:CDS | 30.0% | |
| CAGATCTCTGATCATAAAAT+GGG | + | chr3.3:91486113-91486132 | None:intergenic | 30.0% | |
| CATCATTTACCATAAACATG+TGG | - | chr3.3:91486986-91487005 | MS.gene40692:CDS | 30.0% | |
| GAATAATATATGTGTGTGTG+TGG | + | chr3.3:91484833-91484852 | None:intergenic | 30.0% | |
| GGATATTTCCACAAATACTT+TGG | - | chr3.3:91487179-91487198 | MS.gene40692:CDS | 30.0% | |
| TAAGTAACAAATCTACTTCC+TGG | + | chr3.3:91485293-91485312 | None:intergenic | 30.0% | |
| TACTAAAATTGGATACTGCA+TGG | - | chr3.3:91486792-91486811 | MS.gene40692:intron | 30.0% | |
| TCATTTACCATAAACATGTG+GGG | - | chr3.3:91486988-91487007 | MS.gene40692:CDS | 30.0% | |
| TGATAGCTCTTAAAACTCTA+CGG | + | chr3.3:91484587-91484606 | None:intergenic | 30.0% | |
| ! | ATTATTGATGGCTCATACAA+TGG | - | chr3.3:91487157-91487176 | MS.gene40692:CDS | 30.0% |
| ! | ATTTGCAATAAAGCATCTCT+TGG | - | chr3.3:91483897-91483916 | MS.gene40692:intron | 30.0% |
| ! | CTGTAACTTGTATCATTTCT+TGG | - | chr3.3:91484975-91484994 | MS.gene40692:intron | 30.0% |
| ! | CTTCTTTTACAGATTGATCA+AGG | + | chr3.3:91486676-91486695 | None:intergenic | 30.0% |
| ! | CTTTTATCTCAAACTATTGG+AGG | - | chr3.3:91487514-91487533 | MS.gene40692:CDS | 30.0% |
| ! | GTGCTTTTATCTCAAACTAT+TGG | - | chr3.3:91487511-91487530 | MS.gene40692:CDS | 30.0% |
| ! | TACATTGACAGTACTGTTTT+TGG | + | chr3.3:91483992-91484011 | None:intergenic | 30.0% |
| ! | TGAGATAAAAGCACATACTT+CGG | + | chr3.3:91487505-91487524 | None:intergenic | 30.0% |
| ! | TTATTGATGGCTCATACAAT+GGG | - | chr3.3:91487158-91487177 | MS.gene40692:CDS | 30.0% |
| ! | TTTGTGTTAATGCATTTTGC+AGG | - | chr3.3:91483465-91483484 | MS.gene40692:CDS | 30.0% |
| !! | ATGAATTTTCGAGAACTTTC+TGG | + | chr3.3:91487473-91487492 | None:intergenic | 30.0% |
| !! | GTAGATTTGTTACTTAACGA+TGG | - | chr3.3:91485297-91485316 | MS.gene40692:intron | 30.0% |
| !! | TAGCTAACTTGAGTTTTGAT+AGG | + | chr3.3:91483681-91483700 | None:intergenic | 30.0% |
| !!! | CAGTGCTTTTTCTGTTTATA+TGG | - | chr3.3:91484299-91484318 | MS.gene40692:CDS | 30.0% |
| !!! | TATCTCGGTTTTTTACTTTC+AGG | - | chr3.3:91484929-91484948 | MS.gene40692:intron | 30.0% |
| !!! | TCTTATTTTATGCGCTTATC+TGG | - | chr3.3:91486232-91486251 | MS.gene40692:intron | 30.0% |
| AAGTGCAGATAACATTTGGA+TGG | + | chr3.3:91485599-91485618 | None:intergenic | 35.0% | |
| AATCCATAACATTTGAGCCT+TGG | + | chr3.3:91485702-91485721 | None:intergenic | 35.0% | |
| ACAAGTAATCTCTGATCAAG+TGG | - | chr3.3:91483590-91483609 | MS.gene40692:intron | 35.0% | |
| ACAGAAGATTCCTTTGCATA+AGG | + | chr3.3:91484438-91484457 | None:intergenic | 35.0% | |
| ACTTGTCTGTAACAAAACCT+CGG | - | chr3.3:91483566-91483585 | MS.gene40692:intron | 35.0% | |
| ATAACTCAACACTGTTGAAG+AGG | - | chr3.3:91484777-91484796 | MS.gene40692:intron | 35.0% | |
| ATGTATCAATGCCAATTCTG+TGG | - | chr3.3:91486751-91486770 | MS.gene40692:CDS | 35.0% | |
| CACAAATGCTTTCATGACAA+AGG | + | chr3.3:91483451-91483470 | None:intergenic | 35.0% | |
| CACATAGATTAGGATCATCT+AGG | + | chr3.3:91484667-91484686 | None:intergenic | 35.0% | |
| CAGAGGTAATTCATCAATTC+TGG | + | chr3.3:91484064-91484083 | None:intergenic | 35.0% | |
| CAGTACTGTCAATGTAACTA+TGG | - | chr3.3:91483996-91484015 | MS.gene40692:intron | 35.0% | |
| CATCACTAGATCATCTTCAT+AGG | + | chr3.3:91484348-91484367 | None:intergenic | 35.0% | |
| CATTTGGATGGAATGTTTAG+GGG | + | chr3.3:91485587-91485606 | None:intergenic | 35.0% | |
| CTGTATTCTTGATTGTTGTC+TGG | - | chr3.3:91486624-91486643 | MS.gene40692:intron | 35.0% | |
| GAACCTAAGTAAACAAGAAG+AGG | + | chr3.3:91485519-91485538 | None:intergenic | 35.0% | |
| GCAATTAAATCAACCTGAGT+TGG | + | chr3.3:91483796-91483815 | None:intergenic | 35.0% | |
| GCATGAAGGGTTACTAAAAT+TGG | - | chr3.3:91486781-91486800 | MS.gene40692:intron | 35.0% | |
| GGAACTCAAACATTTCCATA+AGG | - | chr3.3:91486865-91486884 | MS.gene40692:intron | 35.0% | |
| GGATTTAAACGTCATATCCA+AGG | + | chr3.3:91483923-91483942 | None:intergenic | 35.0% | |
| GTATGTTCTTCCTTATGCAA+AGG | - | chr3.3:91484425-91484444 | MS.gene40692:intron | 35.0% | |
| GTGTGTATTATTGTGTTTCC+TGG | - | chr3.3:91485860-91485879 | MS.gene40692:intron | 35.0% | |
| TCAATTTCCCCACATGTTTA+TGG | + | chr3.3:91486998-91487017 | None:intergenic | 35.0% | |
| TCTGAAAATCACTGAGTTCT+GGG | - | chr3.3:91484161-91484180 | MS.gene40692:CDS | 35.0% | |
| TGAAGATAAACTATCAGAGG+AGG | - | chr3.3:91484685-91484704 | MS.gene40692:CDS | 35.0% | |
| TGATACATTAGATATCCGGA+TGG | - | chr3.3:91484032-91484051 | MS.gene40692:intron | 35.0% | |
| TGTTTCCGAAGGAAATCTAA+AGG | - | chr3.3:91484094-91484113 | MS.gene40692:CDS | 35.0% | |
| TGTTTCTTAGAAAACTGGAC+TGG | - | chr3.3:91484554-91484573 | MS.gene40692:CDS | 35.0% | |
| TTACAGTAGACATCCAAGTA+TGG | + | chr3.3:91484961-91484980 | None:intergenic | 35.0% | |
| ! | AACGACTTTTGTTCGTTTAC+AGG | - | chr3.3:91486271-91486290 | MS.gene40692:CDS | 35.0% |
| ! | ACGACTTTTGTTCGTTTACA+GGG | - | chr3.3:91486272-91486291 | MS.gene40692:CDS | 35.0% |
| ! | ATGACATGCTTGCTGAATAT+GGG | - | chr3.3:91483824-91483843 | MS.gene40692:intron | 35.0% |
| ! | GCTACTAATGAGTTTAGCTT+TGG | - | chr3.3:91485405-91485424 | MS.gene40692:intron | 35.0% |
| ! | TGGTTGCATGCATTTTACTT+GGG | - | chr3.3:91486300-91486319 | MS.gene40692:CDS | 35.0% |
| ! | TGTCCTCTTCTTGTTTACTT+AGG | - | chr3.3:91485513-91485532 | MS.gene40692:intron | 35.0% |
| ! | TGTTAATGCATTTTGCAGGA+TGG | - | chr3.3:91483469-91483488 | MS.gene40692:CDS | 35.0% |
| ! | TTGGTTGCATGCATTTTACT+TGG | - | chr3.3:91486299-91486318 | MS.gene40692:CDS | 35.0% |
| ! | TTTCTGGTAAGTTAACCTCA+AGG | + | chr3.3:91487457-91487476 | None:intergenic | 35.0% |
| !! | AACTTGAGTTTTGATAGGTG+TGG | + | chr3.3:91483676-91483695 | None:intergenic | 35.0% |
| !! | ATGCTTTGTTTCCACAGAAT+TGG | + | chr3.3:91486765-91486784 | None:intergenic | 35.0% |
| !! | CTTTTGACTCTTTTACACGT+AGG | - | chr3.3:91485980-91485999 | MS.gene40692:CDS | 35.0% |
| !!! | GTAGAGTTTTAAGAGCTATC+AGG | - | chr3.3:91484586-91484605 | MS.gene40692:CDS | 35.0% |
| AACAAATCTACTTCCTGGCT+CGG | + | chr3.3:91485288-91485307 | None:intergenic | 40.0% | |
| AACAAATTCTTCCCCTTCCT+TGG | + | chr3.3:91485052-91485071 | None:intergenic | 40.0% | |
| AACGTGCATATGTTTCTCTC+CGG | - | chr3.3:91487561-91487580 | MS.gene40692:CDS | 40.0% | |
| AAGACCATGTTTCCTGATGT+GGG | - | chr3.3:91484740-91484759 | MS.gene40692:intron | 40.0% | |
| ACAACTCATGTATCTCACAC+TGG | + | chr3.3:91486052-91486071 | None:intergenic | 40.0% | |
| ACAGAATGCAGAGATTCTGA+AGG | - | chr3.3:91486465-91486484 | MS.gene40692:intron | 40.0% | |
| ACATTAACGTAGTAGGATGG+AGG | - | chr3.3:91485328-91485347 | MS.gene40692:intron | 40.0% | |
| AGCAAGCACATTAACGTAGT+AGG | - | chr3.3:91485321-91485340 | MS.gene40692:intron | 40.0% | |
| AGCACATTAACGTAGTAGGA+TGG | - | chr3.3:91485325-91485344 | MS.gene40692:intron | 40.0% | |
| AGCAGAGATGCATTTGACAA+AGG | + | chr3.3:91483516-91483535 | None:intergenic | 40.0% | |
| AGTCTTGAACATCACAGCAT+AGG | + | chr3.3:91485896-91485915 | None:intergenic | 40.0% | |
| ATAAACTATCAGAGGAGGCT+GGG | - | chr3.3:91484690-91484709 | MS.gene40692:CDS | 40.0% | |
| ATAGTAATGCGATCAGACAG+AGG | + | chr3.3:91486496-91486515 | None:intergenic | 40.0% | |
| ATCTGTTGCACTCATTTCCT+CGG | + | chr3.3:91485007-91485026 | None:intergenic | 40.0% | |
| ATTTGACAAAGGCTGCTTGT+TGG | + | chr3.3:91483505-91483524 | None:intergenic | 40.0% | |
| CAATTGGATTTCCTGTCAAG+AGG | + | chr3.3:91484637-91484656 | None:intergenic | 40.0% | |
| CATAGGATGAATCAGACCTT+AGG | + | chr3.3:91484331-91484350 | None:intergenic | 40.0% | |
| CATTAGATATCCGGATGGAT+TGG | - | chr3.3:91484037-91484056 | MS.gene40692:intron | 40.0% | |
| CTGGAGTTTGCAGAAAACAA+TGG | + | chr3.3:91483640-91483659 | None:intergenic | 40.0% | |
| CTGTGGAAACAAAGCATGAA+GGG | - | chr3.3:91486768-91486787 | MS.gene40692:intron | 40.0% | |
| GACTGACTGTCAGTTAGTAA+GGG | - | chr3.3:91484183-91484202 | MS.gene40692:CDS | 40.0% | |
| GATACATGAGTTGTTGGCAT+TGG | - | chr3.3:91486058-91486077 | MS.gene40692:CDS | 40.0% | |
| GTCAAAAAGGATGTTTCCGA+AGG | - | chr3.3:91484083-91484102 | MS.gene40692:CDS | 40.0% | |
| GTCTGAAAATCACTGAGTTC+TGG | - | chr3.3:91484160-91484179 | MS.gene40692:CDS | 40.0% | |
| GTGATGCACAAAATTCAAGC+CGG | - | chr3.3:91484362-91484381 | MS.gene40692:intron | 40.0% | |
| GTGTGAGATACATGAGTTGT+TGG | - | chr3.3:91486052-91486071 | MS.gene40692:CDS | 40.0% | |
| TAAGACCATGTTTCCTGATG+TGG | - | chr3.3:91484739-91484758 | MS.gene40692:intron | 40.0% | |
| TCCACTCTCTCAGATAAAGT+AGG | + | chr3.3:91485360-91485379 | None:intergenic | 40.0% | |
| TCCTACTTTATCTGAGAGAG+TGG | - | chr3.3:91485356-91485375 | MS.gene40692:intron | 40.0% | |
| TCTGTGGAAACAAAGCATGA+AGG | - | chr3.3:91486767-91486786 | MS.gene40692:intron | 40.0% | |
| TCTGTGTTTGTGCAAGAGTT+AGG | - | chr3.3:91487339-91487358 | MS.gene40692:intron | 40.0% | |
| TGATGCACAAAATTCAAGCC+GGG | - | chr3.3:91484363-91484382 | MS.gene40692:intron | 40.0% | |
| TGTCCAAGGCTCAAATGTTA+TGG | - | chr3.3:91485696-91485715 | MS.gene40692:CDS | 40.0% | |
| TGTTCGTTTACAGGGAAGAT+TGG | - | chr3.3:91486280-91486299 | MS.gene40692:CDS | 40.0% | |
| TTACAGATTGATCAAGGCGT+AGG | + | chr3.3:91486670-91486689 | None:intergenic | 40.0% | |
| ! | AATAAAGCATCTCTTGGCCT+TGG | - | chr3.3:91483903-91483922 | MS.gene40692:intron | 40.0% |
| ! | CATGACATGCTTGCTGAATA+TGG | - | chr3.3:91483823-91483842 | MS.gene40692:intron | 40.0% |
| ! | CTCTTGGGACTTTTAGATGT+TGG | - | chr3.3:91485763-91485782 | MS.gene40692:intron | 40.0% |
| ! | GAGATCTGTTTTGCCCTTAA+AGG | - | chr3.3:91486125-91486144 | MS.gene40692:intron | 40.0% |
| ! | GGAAACATCCTTTTTGACAG+AGG | + | chr3.3:91484081-91484100 | None:intergenic | 40.0% |
| !! | ACAAGTTTTCAAGCGCAGAA+AGG | + | chr3.3:91486838-91486857 | None:intergenic | 40.0% |
| !! | ATTGTTGTCTGGTTCTCAAC+AGG | - | chr3.3:91486635-91486654 | MS.gene40692:intron | 40.0% |
| !!! | TACTGTTTTTGGACGCTTCT+TGG | + | chr3.3:91483981-91484000 | None:intergenic | 40.0% |
| AAACATCAGCACACTGTTCC+TGG | + | chr3.3:91484401-91484420 | None:intergenic | 45.0% | |
| AACACTTTCTTCAGCACCAG+AGG | - | chr3.3:91484610-91484629 | MS.gene40692:CDS | 45.0% | |
| AATTCAGGAAAGAGTGGCAG+AGG | + | chr3.3:91483772-91483791 | None:intergenic | 45.0% | |
| ACAAGCGAAGAAGGAGTAGA+CGG | - | chr3.3:91485381-91485400 | MS.gene40692:intron | 45.0% | |
| ACCTCATGCTGTAATGTCCA+AGG | - | chr3.3:91485682-91485701 | MS.gene40692:CDS | 45.0% | |
| ACGTGCATATGTTTCTCTCC+GGG | - | chr3.3:91487562-91487581 | MS.gene40692:CDS | 45.0% | |
| AGAGTGGAAACAAGCGAAGA+AGG | - | chr3.3:91485372-91485391 | MS.gene40692:intron | 45.0% | |
| AGCATAGGACATTGTTAGCC+AGG | + | chr3.3:91485881-91485900 | None:intergenic | 45.0% | |
| AGTGCAACAGATAAATGGCC+TGG | - | chr3.3:91485015-91485034 | MS.gene40692:intron | 45.0% | |
| ATCAGAGATTACTTGTGCCG+AGG | + | chr3.3:91483586-91483605 | None:intergenic | 45.0% | |
| CAATTCTGGTCCAATCCATC+CGG | + | chr3.3:91484050-91484069 | None:intergenic | 45.0% | |
| CAGCTGTTGATCCTGTCTAT+AGG | - | chr3.3:91486401-91486420 | MS.gene40692:CDS | 45.0% | |
| CCATAAGGCTAGATACATGC+TGG | - | chr3.3:91486880-91486899 | MS.gene40692:intron | 45.0% | |
| CGCTTGAAAACTTGTGTCGA+GGG | - | chr3.3:91486843-91486862 | MS.gene40692:intron | 45.0% | |
| CTCAAACTATTGGAGGAGAC+AGG | - | chr3.3:91487521-91487540 | MS.gene40692:CDS | 45.0% | |
| CTTAAAGGATGCAGCATGGA+CGG | - | chr3.3:91486140-91486159 | MS.gene40692:intron | 45.0% | |
| CTTTCCTGAATTCCCAACTC+AGG | - | chr3.3:91483780-91483799 | MS.gene40692:intron | 45.0% | |
| GAAGCTGTCACAAGTATCCT+TGG | - | chr3.3:91486692-91486711 | MS.gene40692:CDS | 45.0% | |
| GAGGACATACTTAAGTGCGA+AGG | + | chr3.3:91486203-91486222 | None:intergenic | 45.0% | |
| GAGTGAAGATATGCAGTGCA+TGG | + | chr3.3:91485457-91485476 | None:intergenic | 45.0% | |
| GATAAACTATCAGAGGAGGC+TGG | - | chr3.3:91484689-91484708 | MS.gene40692:CDS | 45.0% | |
| GATGCACAAAATTCAAGCCG+GGG | - | chr3.3:91484364-91484383 | MS.gene40692:intron | 45.0% | |
| GCTCAAGGGTTGTATAGAAG+GGG | - | chr3.3:91486902-91486921 | MS.gene40692:intron | 45.0% | |
| GCTTGAAAACTTGTGTCGAG+GGG | - | chr3.3:91486844-91486863 | MS.gene40692:intron | 45.0% | |
| GGACTGACTGTCAGTTAGTA+AGG | - | chr3.3:91484182-91484201 | MS.gene40692:CDS | 45.0% | |
| GGCTCAAGGGTTGTATAGAA+GGG | - | chr3.3:91486901-91486920 | MS.gene40692:intron | 45.0% | |
| GTCCATGCTGCATCCTTTAA+GGG | + | chr3.3:91486141-91486160 | None:intergenic | 45.0% | |
| GTGAGAGTGGTGATATAGGA+GGG | - | chr3.3:91486924-91486943 | MS.gene40692:intron | 45.0% | |
| GTTGGGAATTCAGGAAAGAG+TGG | + | chr3.3:91483778-91483797 | None:intergenic | 45.0% | |
| TGCAAACTCCAGCATCTTAG+CGG | - | chr3.3:91483648-91483667 | MS.gene40692:intron | 45.0% | |
| TGGCTCAAGGGTTGTATAGA+AGG | - | chr3.3:91486900-91486919 | MS.gene40692:intron | 45.0% | |
| TTGTATAGAAGGGGTGAGAG+TGG | - | chr3.3:91486911-91486930 | MS.gene40692:intron | 45.0% | |
| ! | ATTTGTGCTGACCAAGGAAG+GGG | - | chr3.3:91485038-91485057 | MS.gene40692:intron | 45.0% |
| ! | GAATATGGGCTTTGCTGTGT+CGG | - | chr3.3:91483838-91483857 | MS.gene40692:intron | 45.0% |
| ! | GATGTTGGTTGTCTTTGTCC+AGG | - | chr3.3:91485778-91485797 | MS.gene40692:intron | 45.0% |
| ! | GATTTGTGCTGACCAAGGAA+GGG | - | chr3.3:91485037-91485056 | MS.gene40692:intron | 45.0% |
| ! | TCAACCTGAGTTGGGAATTC+AGG | + | chr3.3:91483787-91483806 | None:intergenic | 45.0% |
| ! | TTTCAGGTCTGAGCCATACT+TGG | - | chr3.3:91484945-91484964 | MS.gene40692:CDS | 45.0% |
| !! | CCAGCATGTATCTAGCCTTA+TGG | + | chr3.3:91486883-91486902 | None:intergenic | 45.0% |
| !! | CTAGATACATGCTGGCTCAA+GGG | - | chr3.3:91486888-91486907 | MS.gene40692:intron | 45.0% |
| ACCATGTTTCCTGATGTGGG+AGG | - | chr3.3:91484743-91484762 | MS.gene40692:intron | 50.0% | |
| ACCTCCCACATCAGGAAACA+TGG | + | chr3.3:91484747-91484766 | None:intergenic | 50.0% | |
| AGGGGTGAGAGTGGTGATAT+AGG | - | chr3.3:91486920-91486939 | MS.gene40692:intron | 50.0% | |
| ATGAGCTATCTGTGCTGCCA+AGG | + | chr3.3:91486712-91486731 | None:intergenic | 50.0% | |
| CGTCCATGCTGCATCCTTTA+AGG | + | chr3.3:91486142-91486161 | None:intergenic | 50.0% | |
| CGTGCATATGTTTCTCTCCG+GGG | - | chr3.3:91487563-91487582 | MS.gene40692:CDS | 50.0% | |
| GAGGCATGCATCCTATAGAC+AGG | + | chr3.3:91486415-91486434 | None:intergenic | 50.0% | |
| GCCTTGGACATTACAGCATG+AGG | + | chr3.3:91485686-91485705 | None:intergenic | 50.0% | |
| GCGCTTGAAAACTTGTGTCG+AGG | - | chr3.3:91486842-91486861 | MS.gene40692:intron | 50.0% | |
| GGTGAGAGTGGTGATATAGG+AGG | - | chr3.3:91486923-91486942 | MS.gene40692:intron | 50.0% | |
| TCATTTCTTGGCTGTGTCCG+AGG | - | chr3.3:91484987-91485006 | MS.gene40692:intron | 50.0% | |
| TCCTGGTCTGATAATCTCCC+CGG | + | chr3.3:91484384-91484403 | None:intergenic | 50.0% | |
| TCCTTGGTCAGCACAAATCC+AGG | + | chr3.3:91485036-91485055 | None:intergenic | 50.0% | |
| TGATATCAGGCGCAAGACAC+CGG | - | chr3.3:91487410-91487429 | MS.gene40692:CDS | 50.0% | |
| TGCCCTTAAAGGATGCAGCA+TGG | - | chr3.3:91486136-91486155 | MS.gene40692:intron | 50.0% | |
| TTTCCTGATGTGGGAGGTCT+TGG | - | chr3.3:91484749-91484768 | MS.gene40692:intron | 50.0% | |
| TTTCCTGTCAAGAGGTCCTC+TGG | + | chr3.3:91484629-91484648 | None:intergenic | 50.0% | |
| TTTCTCTCCGGGGAGATAAG+CGG | - | chr3.3:91487573-91487592 | MS.gene40692:CDS | 50.0% | |
| TTTGAAAGCTGGCAGCGACT+TGG | - | chr3.3:91485123-91485142 | MS.gene40692:intron | 50.0% | |
| ! | GGATTTGTGCTGACCAAGGA+AGG | - | chr3.3:91485036-91485055 | MS.gene40692:intron | 50.0% |
| !! | ATCCTCTGCGCTTTGAAAGC+TGG | - | chr3.3:91485112-91485131 | MS.gene40692:intron | 50.0% |
| !! | GCTAGATACATGCTGGCTCA+AGG | - | chr3.3:91486887-91486906 | MS.gene40692:intron | 50.0% |
| GAAGGTGGCAAAGGTGGAGA+AGG | - | chr3.3:91483862-91483881 | MS.gene40692:intron | 55.0% | |
| GATATCAGGCGCAAGACACC+GGG | - | chr3.3:91487411-91487430 | MS.gene40692:CDS | 55.0% | |
| GGCAAAGACATCTGCTCAGC+AGG | - | chr3.3:91485426-91485445 | MS.gene40692:intron | 55.0% | |
| GTGTGGTTCCGCTAAGATGC+TGG | + | chr3.3:91483659-91483678 | None:intergenic | 55.0% | |
| TGCCAGCTTTCAAAGCGCAG+AGG | + | chr3.3:91485117-91485136 | None:intergenic | 55.0% | |
| TGTCCAAGACCTCCCACATC+AGG | + | chr3.3:91484755-91484774 | None:intergenic | 55.0% | |
| TTTCTTGGTTGCACCGAGCC+AGG | - | chr3.3:91485272-91485291 | MS.gene40692:intron | 55.0% | |
| ! | CTTTGCTGTGTCGGTGAAGG+TGG | - | chr3.3:91483847-91483866 | MS.gene40692:intron | 55.0% |
| ! | GCCTGGATTTGTGCTGACCA+AGG | - | chr3.3:91485032-91485051 | MS.gene40692:intron | 55.0% |
| ! | GGCTGCTTGTTGGAACTGTG+TGG | + | chr3.3:91483495-91483514 | None:intergenic | 55.0% |
| ! | TGTGTCGGTGAAGGTGGCAA+AGG | - | chr3.3:91483853-91483872 | MS.gene40692:intron | 55.0% |
| GCACCAGAGGACCTCTTGAC+AGG | - | chr3.3:91484623-91484642 | MS.gene40692:CDS | 60.0% | |
| GCCGGGGAGATTATCAGACC+AGG | - | chr3.3:91484380-91484399 | MS.gene40692:intron | 60.0% | |
| GTCGGTGAAGGTGGCAAAGG+TGG | - | chr3.3:91483856-91483875 | MS.gene40692:intron | 60.0% | |
| TCAGAGGAGGCTGGGTCTGA+AGG | - | chr3.3:91484698-91484717 | MS.gene40692:CDS | 60.0% | |
| ! | GGGCTTTGCTGTGTCGGTGA+AGG | - | chr3.3:91483844-91483863 | MS.gene40692:intron | 60.0% |
| CGCAAGACACCGGGTTCTGC+TGG | - | chr3.3:91487420-91487439 | MS.gene40692:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 91483444 | 91487595 | 91483444 | ID=MS.gene40692 |
| chr3.3 | mRNA | 91483444 | 91487595 | 91483444 | ID=MS.gene40692.t1;Parent=MS.gene40692 |
| chr3.3 | exon | 91487347 | 91487595 | 91487347 | ID=MS.gene40692.t1.exon1;Parent=MS.gene40692.t1 |
| chr3.3 | CDS | 91487347 | 91487595 | 91487347 | ID=cds.MS.gene40692.t1;Parent=MS.gene40692.t1 |
| chr3.3 | exon | 91486945 | 91487237 | 91486945 | ID=MS.gene40692.t1.exon2;Parent=MS.gene40692.t1 |
| chr3.3 | CDS | 91486945 | 91487237 | 91486945 | ID=cds.MS.gene40692.t1;Parent=MS.gene40692.t1 |
| chr3.3 | exon | 91486678 | 91486777 | 91486678 | ID=MS.gene40692.t1.exon3;Parent=MS.gene40692.t1 |
| chr3.3 | CDS | 91486678 | 91486777 | 91486678 | ID=cds.MS.gene40692.t1;Parent=MS.gene40692.t1 |
| chr3.3 | exon | 91486584 | 91486637 | 91486584 | ID=MS.gene40692.t1.exon4;Parent=MS.gene40692.t1 |
| chr3.3 | CDS | 91486584 | 91486637 | 91486584 | ID=cds.MS.gene40692.t1;Parent=MS.gene40692.t1 |
| chr3.3 | exon | 91486241 | 91486449 | 91486241 | ID=MS.gene40692.t1.exon5;Parent=MS.gene40692.t1 |
| chr3.3 | CDS | 91486241 | 91486449 | 91486241 | ID=cds.MS.gene40692.t1;Parent=MS.gene40692.t1 |
| chr3.3 | exon | 91485878 | 91486088 | 91485878 | ID=MS.gene40692.t1.exon6;Parent=MS.gene40692.t1 |
| chr3.3 | CDS | 91485878 | 91486088 | 91485878 | ID=cds.MS.gene40692.t1;Parent=MS.gene40692.t1 |
| chr3.3 | exon | 91485644 | 91485745 | 91485644 | ID=MS.gene40692.t1.exon7;Parent=MS.gene40692.t1 |
| chr3.3 | CDS | 91485644 | 91485745 | 91485644 | ID=cds.MS.gene40692.t1;Parent=MS.gene40692.t1 |
| chr3.3 | exon | 91484933 | 91484986 | 91484933 | ID=MS.gene40692.t1.exon8;Parent=MS.gene40692.t1 |
| chr3.3 | CDS | 91484933 | 91484986 | 91484933 | ID=cds.MS.gene40692.t1;Parent=MS.gene40692.t1 |
| chr3.3 | exon | 91484542 | 91484741 | 91484542 | ID=MS.gene40692.t1.exon9;Parent=MS.gene40692.t1 |
| chr3.3 | CDS | 91484542 | 91484741 | 91484542 | ID=cds.MS.gene40692.t1;Parent=MS.gene40692.t1 |
| chr3.3 | exon | 91484072 | 91484372 | 91484072 | ID=MS.gene40692.t1.exon10;Parent=MS.gene40692.t1 |
| chr3.3 | CDS | 91484072 | 91484372 | 91484072 | ID=cds.MS.gene40692.t1;Parent=MS.gene40692.t1 |
| chr3.3 | exon | 91483444 | 91483578 | 91483444 | ID=MS.gene40692.t1.exon11;Parent=MS.gene40692.t1 |
| chr3.3 | CDS | 91483444 | 91483578 | 91483444 | ID=cds.MS.gene40692.t1;Parent=MS.gene40692.t1 |
| Gene Sequence |
| Protein sequence |
